HHsearch alignment for GI: 254780486 and conserved domain: PRK13355
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional.
Probab=99.66 E-value=1.4e-13 Score=104.73 Aligned_cols=342 Identities=15% Similarity=0.091 Sum_probs=180.1
Q ss_pred HHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC-CCCHHHHHHHHHHHHHC
Q ss_conf 99999999759839992897689803446566779889999999999863786887224436-88589999999984012
Q gi|254780486|r 10 EERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLC-GNYNQHLELEEEAADFF 88 (381)
Q Consensus 10 ~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~-G~~~~~~~lE~~lA~~~ 88 (381)
T Consensus 135 ~~~a~~~e~~g~~i~k------lnignpa~fgf~~p~~~~~~~~~~~~--~~~gy~~s~g~~~ar~a~~~~~q~~~~~~~ 206 (518)
T PRK13355 135 ADEAMRMEANGTHILK------LNIGNPAPFGFRTPDEVVYDMAHQLP--DTEGYSPSKGLFSARKAIMQYAQLKNIPNV 206 (518)
T ss_pred HHHHHHHHHCCCEEEE------ECCCCCCCCCCCCCHHHHHHHHHHCC--CCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 9999999974881676------34789886688894899999997372--345875455756899999999997699998
Q ss_pred CCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHH-HHHCCCCCEEECC-------CCHHHHHHHHHHHHHCC
Q ss_conf 888516741660245655666316897100454202677526-6640876403056-------88147899764310002
Q gi|254780486|r 89 GFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREG-INSGKAQAIAIPH-------NNINSFAENINKWRKSG 160 (381)
Q Consensus 89 g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g-~~ls~a~~~~f~H-------nD~~~Le~~l~~~~~~~ 160 (381)
T Consensus 207 ~~~di~~gnGvSE~i~~am~Alln~GDeVLiP~P~Y-Plyta~v~L~Gg~pV~y~~dEe~~w~PDiedLe~kIT------ 279 (518)
T PRK13355 207 DIDDIYTGNGVSELINLSMSALLDDGDEVLVPSPDY-PLWTACVNLAGGTAVHYRCDEESEWYPDIDDIRSKIT------ 279 (518)
T ss_pred CHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCC-CCHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCC------
T ss_conf 740356547767999999998368999898259999-7789998860987889874522177889999985357------
Q ss_pred CCCCCEEEECCCCCCCCCH---HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCC--CCCCCCCCCCCC
Q ss_conf 4786079714621576613---46899999863136089861311222347776401100001346--521001346565
Q gi|254780486|r 161 GKGFPWIVVESIYSMDGDK---APLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNN--VIVMHSCSKALG 235 (381)
Q Consensus 161 ~~~~~~vv~egv~Sm~G~~---apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~--~iv~~TlsKa~g 235 (381)
T Consensus 280 ~kTKAIVInNPNNP-TGAVyS~E~LeeIaeiArehdLiIISDEIY~~LvYD--g~~h~Siasla~d~~~It~NG~SKsya 356 (518)
T PRK13355 280 SKTKAIVIINPNNP-TGALYPKEVLQQIVDIAREHQLIIFSDEIYDRLVMD--GLEHTSIASLAPDLFCVTFSGLSKSHM 356 (518)
T ss_pred CCCEEEEEECCCCC-CCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHCCCC--CCCCCCHHHCCCCCEEEEECCCCCCEE
T ss_conf 15579999689898-887889999999999999859699962302210068--986304767088645999887766633
Q ss_pred CEE---EEEE--CCCCCCC-CC---CCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHCC
Q ss_conf 302---6752--4510010-00---0121100001357750257898878988627102---247899999999876417
Q gi|254780486|r 236 SSG---ALVG--SNKIIYD-YL---INYAKPFIYTTSPSPILAVVACEALKLIKRKPAL---HKSLLQLINITDKIANKK 303 (381)
Q Consensus 236 ~~G---G~i~--~~~~ii~-~l---~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~---~~~l~~~~~~~~~~~~~~ 303 (381)
T Consensus 357 MtGWRiGwmv~sG~~~~a~~~Ie~l~~Las~~l--csnvpa-Q~A~~aAL~g~qs~~d~~~~~~rl~erRdlv~e~Ln~I 433 (518)
T PRK13355 357 IAGFRAGWMMLSGNKRHAKDYIEGLNMLANMRM--CSNVPA-QSVVQTALGGHQSVKDYTVPGGRLYDQRELVYDMLNAI 433 (518)
T ss_pred CCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCC--CCCHHH-HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 220113665424858999999999999860456--636899-99999986287648999999999999999999998359
Q ss_pred CCCCCCCCEEEEEE-C--CH-----HHHHHHHHHHH-HCCEEEEEE---CCCCCCCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf 97899897289995-8--97-----99999999999-779189862---2888888870399962878999999999999
Q gi|254780486|r 304 IGFSSQSHIQSIVI-G--DN-----KSCLNIAKNLQ-KKGFDIRAI---RPPTVPINTARLRISITLNVDEPTIVKLFDI 371 (381)
Q Consensus 304 ~g~~~~s~I~~v~~-g--d~-----~~a~~~~~~L~-~~Gi~v~~i---~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~ 371 (381)
T Consensus 434 pGvscvkP~GAFYlFPkID~~~~~i~dDeeFal~LL~Ee~VlVVPGsaFG~~----~pghfRIsya--ps~e~L~EA~~R 507 (518)
T PRK13355 434 PGISAVKPKAAFYIFPKIDVKIFNIHSDEQFALDLLHEKHILISHGGAFNWD----KPDHFRVVYL--PRLGMLEETMDE 507 (518)
T ss_pred CCCEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC----CCCEEEEEEC--CCHHHHHHHHHH
T ss_conf 9976589981589955415344899899999999998589999587544899----9897999927--999999999999
Q ss_pred HHHHHHH
Q ss_conf 9999887
Q gi|254780486|r 372 LPQIISE 378 (381)
Q Consensus 372 l~~v~~E 378 (381)
T Consensus 508 I~~FL~~ 514 (518)
T PRK13355 508 LDDFFSY 514 (518)
T ss_pred HHHHHHH
T ss_conf 9999998