HHsearch alignment for GI: 254780486 and conserved domain: PRK13580
>PRK13580 serine hydroxymethyltransferase; Provisional.
Probab=99.82 E-value=6.3e-18 Score=131.88 Aligned_cols=328 Identities=18% Similarity=0.229 Sum_probs=204.9
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH----HHHHCCCCCEEEEC-CCCHHHHHHHH
Q ss_conf 03446566779889999999999863786887224436885899999999----84012888516741-66024565566
Q gi|254780486|r 34 FTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEE----AADFFGFEKMLYFG-SGYAANMAILS 108 (381)
Q Consensus 34 f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~----lA~~~g~e~al~~~-sG~~An~~~i~ 108 (381)
T Consensus 57 IASEN~----~S~aV~ea~gS~ltnKYAEGyPG~RYY~Gc-e~vD~iE~lai~rak~LF~a~~aNVQP~SGs~AN~avy~ 131 (493)
T PRK13580 57 IASENY----SSLAVQLAMGNLLTDKYAEGTPGHRFYAGC-QNVDAIEWEAAEHARELFGAEHAYVQPHSGADANLVAFW 131 (493)
T ss_pred EECCCC----CCHHHHHHHCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
T ss_conf 734887----889999985673101245889986323775-779999999999999983898503277876077899999
Q ss_pred HHC-----CCC--------------------------CCCCHHHHCCHH-HHHHHHH--CCC--CCEEECC------CCH
Q ss_conf 631-----689--------------------------710045420267-7526664--087--6403056------881
Q gi|254780486|r 109 TLP-----QAT--------------------------DLIVYDKLVHAS-IREGINS--GKA--QAIAIPH------NNI 146 (381)
Q Consensus 109 ~l~-----~~~--------------------------d~ii~D~~~HaS-i~~g~~l--s~a--~~~~f~H------nD~ 146 (381)
T Consensus 132 All~~~v~~Pgl~~~g~~~~~~l~~~~~~~~~~~~g~d~imgl~L~~GGHLTHG~~~n~sg~~~~~~~Y~vd~et~~IDy 211 (493)
T PRK13580 132 AILAHKVEAPALSKLGAKTVNDLTEEEWEELRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFRQRSYGVDPDTGLLDY 211 (493)
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCH
T ss_conf 98600024864223343332323301222220246788687058887866336996563422688787536633484089
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEE-EEHHCCCCCC
Q ss_conf 478997643100024786079714621576613468999998631360898613112223477764011-0000134652
Q gi|254780486|r 147 NSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLT-HIIEERNNVI 225 (381)
Q Consensus 147 ~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~-~~~~~~~~~i 225 (381)
T Consensus 212 D~~~~~A~~~kP-----KlII~G~SaYpr---~idf~~freIAdeVGA~LmaDiAHiaGLV-A~g~-~~~h~sP~~~ADv 281 (493)
T PRK13580 212 DEIAALAREFKP-----LVLVAGYSAYPR---RVNFAKLREIADEVGAVLMVDMAHFAGLV-AGKV-FTGDEDPVPHADI 281 (493)
T ss_pred HHHHHHHHHCCC-----CEEEECCCCCCC---CCCHHHHHHHHHHCCCEEEEEHHHHHHHH-HCCC-CCCCCCCCCCCCE
T ss_conf 999999997499-----889977624656---44879999999971978981056676776-4254-5689995133515
Q ss_pred CCCCCCCCC-CCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCC---HHHHHHHHHHHH-HHHH
Q ss_conf 100134656-53026752451001000012110000135775025789887898862710---224789999999-9876
Q gi|254780486|r 226 VMHSCSKAL-GSSGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPA---LHKSLLQLINIT-DKIA 300 (381)
Q Consensus 226 v~~TlsKa~-g~~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~---~~~~l~~~~~~~-~~~~ 300 (381)
T Consensus 282 VTtTTHKTLrGPRGGiIl~~~e~~~~Id~av-Pg~QGGP~~h~IAakAv-af~EA-~~peFk~Y~~qVv~NAkaLA~~L~ 358 (493)
T PRK13580 282 VTTTTHKTLRGPRGGLVLAKKEYAEAVDKGC-PLVLGGPLPHVMAAKAV-ALAEA-RTPDFKKYAHRVVDNARALAEGFL 358 (493)
T ss_pred EECCCCCCCCCCCCCEEEECHHHHHHHCCCC-CCCCCCHHHHHHHHHHH-HHHHH-HCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7512344567888506884647787651038-75468727769999999-99997-277789999999999999999999
Q ss_pred HCCCCC---CCCCCEEEEEECCHH-HHHHHHHHHHHCCEEEEEECCC---CCCCCCCEEEEEC----CCCCCHHHHHHHH
Q ss_conf 417978---998972899958979-9999999999779189862288---8888870399962----8789999999999
Q gi|254780486|r 301 NKKIGF---SSQSHIQSIVIGDNK-SCLNIAKNLQKKGFDIRAIRPP---TVPINTARLRISI----TLNVDEPTIVKLF 369 (381)
Q Consensus 301 ~~~~g~---~~~s~I~~v~~gd~~-~a~~~~~~L~~~Gi~v~~i~~P---tVp~~~~rlRi~v----~a~~t~edi~~~~ 369 (381)
T Consensus 359 ~~G~~vvsGGTdnHlvLvDl~~~g~tG~~ae~~Le~~gI~vNKN~iP~D~~~p~~~SGIRiGtpa~TtRGm~e~em~~ia 438 (493)
T PRK13580 359 KRGARLVTGGTDNHLLLIDVTSFGLTGRQAEDALLDVGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVA 438 (493)
T ss_pred HCCCEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHH
T ss_conf 88994852888877588856778998899999998779387168898999889888641116666761899989999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999998873
Q gi|254780486|r 370 DILPQIISEG 379 (381)
Q Consensus 370 ~~l~~v~~E~ 379 (381)
T Consensus 439 ~~I~~~l~~~ 448 (493)
T PRK13580 439 ELIVKVLRNT 448 (493)
T ss_pred HHHHHHHHCC
T ss_conf 9999999552