HHsearch alignment for GI: 254780486 and conserved domain: TIGR00508
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase; InterPro: IPR005815 All members of the seed alignment have been demonstrated experimentally to act as (2.6.1.62 from EC), an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae. ; GO: 0004015 adenosylmethionine-8-amino-7-oxononanoate transaminase activity, 0009102 biotin biosynthetic process.
Probab=98.65 E-value=1.1e-05 Score=55.47 Aligned_cols=339 Identities=17% Similarity=0.179 Sum_probs=185.7
Q ss_pred HHCCCEEEECCCC----EEEECCCCCCCCCC--CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-
Q ss_conf 9759839992897----68980344656677--9889999999999863786887224436885899999999840128-
Q gi|254780486|r 17 KSKGRHRQLLRRQ----DIWDFTSHDYLALS--SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG- 89 (381)
Q Consensus 17 ~~~g~~~~~~~~~----~~l~f~s~dYLGl~--~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g- 89 (381)
T Consensus 33 ~~~g~~~~~~~g~p~~~~~~d~~~~ww~~~~g~~~p~~~~~~~~~~~~~~~~~~gg~-----~~~~~~~~~~~~~~~~~~ 107 (466)
T TIGR00508 33 SADGVELTLEDGRPVDVRLIDGLSSWWAAIHGYNHPRLNAAAQKQLDKLSHVLFGGL-----THEPAVELCRKLLKLTPE 107 (466)
T ss_pred CCCCEEEEECCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHCCC
T ss_conf 356416886378842033321101345544057752456788887876555552354-----431578999999973463
Q ss_pred -CCCEEEECCCCHHHHHHHHHHC----CC----------------C----CCCCHHHHCC-HHHHHH-------------
Q ss_conf -8851674166024565566631----68----------------9----7100454202-677526-------------
Q gi|254780486|r 90 -FEKMLYFGSGYAANMAILSTLP----QA----------------T----DLIVYDKLVH-ASIREG------------- 130 (381)
Q Consensus 90 -~e~al~~~sG~~An~~~i~~l~----~~----------------~----d~ii~D~~~H-aSi~~g------------- 130 (381)
T Consensus 108 ~~~~~~~~d~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~gd~~~~~~~cdp~~~~~~~~~~~~~~~~~~~~p~~ 187 (466)
T TIGR00508 108 PLDCVFLADSGSVAVEVALKLALQYWKGKGEPERTKFLTLRNGYHGDTFGALSVCDPENGLHSLWKGYLPENLFAPAPSI 187 (466)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHEEEEECCCCCCCCCCCEECCCCCCHHHHHCCCCCHHHHCCCCCH
T ss_conf 10045530576402466778877654202411132100000454554334211026653212332022220221256511
Q ss_pred ---HHHCCCCC-EEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCH-----HHHHHHHHHHHHCCEEEEECCC
Q ss_conf ---66408764-03056881478997643100024786079714621576613-----4689999986313608986131
Q gi|254780486|r 131 ---INSGKAQA-IAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDK-----APLDDLVKIANDYDGFIVVDEA 201 (381)
Q Consensus 131 ---~~ls~a~~-~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~-----apL~~i~~l~~~y~~~LivDEa 201 (381)
T Consensus 188 ~~g~p~~~~~~~~~w~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~g~gg~~~~~p~~~~~~~~~~~~~~~~~~~d~~ 264 (466)
T TIGR00508 188 VDGLPTSQVRFDEEWNEEDISPLAKLLELHGD---ETVAAVILEPIVQGAGGLRFYHPTYLKRVRALCKKYGLLLIADEI 264 (466)
T ss_pred HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEEEHHH
T ss_conf 11565555677653104567789999985225---401123334444045764102378999999986442010220113
Q ss_pred CCCCCCCCCCCEE-EEEHH---------------CCCCCCCCCCCCCCCCCEEEEEECC-----CCCCCCCCCCC----C
Q ss_conf 1222347776401-10000---------------1346521001346565302675245-----10010000121----1
Q gi|254780486|r 202 HATGVCGPLGKGL-THIIE---------------ERNNVIVMHSCSKALGSSGALVGSN-----KIIYDYLINYA----K 256 (381)
Q Consensus 202 h~~Gv~G~~G~G~-~~~~~---------------~~~~~iv~~TlsKa~g~~GG~i~~~-----~~ii~~l~~~~----~ 256 (381)
T Consensus 265 ~-~g-~g~~g~~~~~~~~~~~~~~~g~~p~~~~~~~pd~~c---~g~~~~--gg~~~~~~~~~~~~~~~~~~~~~~p~~g 337 (466)
T TIGR00508 265 A-TG-FGRTGKLFACEHAGKYQDQHGISPSDQIKVVPDILC---LGKALT--GGYLTLSATLTTDKVAETISSGEGPTGG 337 (466)
T ss_pred H-HC-CCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCHHH---HCCCCC--CCCEEEEHHHHHHHHHHHHCCCCCCCCC
T ss_conf 2-03-575320110121001001027884322010320221---100003--4300000012234567754067776452
Q ss_pred CEECCC--CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC----CCC--------CCCCCEEEEEECCHHH
Q ss_conf 000013--57750257898878988627102247899999999876417----978--------9989728999589799
Q gi|254780486|r 257 PFIYTT--SPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIANKK----IGF--------SSQSHIQSIVIGDNKS 322 (381)
Q Consensus 257 ~~ifst--~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~----~g~--------~~~s~I~~v~~gd~~~ 322 (381)
T Consensus 338 ~~~~gp~~~~~p~~c~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p~~~~~~~g~~g~~~~~~~~~g~~g~~~~~~~~~ 417 (466)
T TIGR00508 338 CFLHGPTFLGNPLACAVAEASLALLLEGPWQKQVSAIESQLKRELSPLRKNPDNGLIGTGVKDVRVLGAIGVVELKEPVN 417 (466)
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 13216420133245666666788774030467899998888876643211566652010011222220010100012357
Q ss_pred HHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999977918986228888888703999628789999999999999999887
Q gi|254780486|r 323 CLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 323 a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
T Consensus 418 ~~~~~~~~~~~g~w~~p~g~--------~~~~~pp~~~~~~~~~~~~~~~~~~~~~ 465 (466)
T TIGR00508 418 VEELQKGFVEKGVWIRPFGK--------LLYLLPPYVITSEELAKLTAALIEALKG 465 (466)
T ss_pred HHHHHHHHHHCCCEECCCCC--------EEEECCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 88887787643741211353--------6564176200448888999999987505