HHsearch alignment for GI: 254780486 and conserved domain: TIGR01976
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein; InterPro: IPR011340 This entry describes probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. The most closely related characterised proteins are active as cysteine desulphurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown..
Probab=99.11 E-value=1.1e-07 Score=68.09 Aligned_cols=323 Identities=15% Similarity=0.176 Sum_probs=192.9
Q ss_pred CCCEEEECCCCCCCCCCCCH-HHHHHHHHHHHHHCCCCCCCCCCCCCC--CHHHHHHHHHHHHHCCCCCE--EEECCCCH
Q ss_conf 89768980344656677988-999999999986378688722443688--58999999998401288851--67416602
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSST-LLREKILSSLDSKIPIGSGGSRLLCGN--YNQHLELEEEAADFFGFEKM--LYFGSGYA 101 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p-~v~~a~~~a~~~~~g~~~~~sr~~~G~--~~~~~~lE~~lA~~~g~e~a--l~~~sG~~ 101 (381)
T Consensus 18 ~~~~~~~~Dn---pAG~q~Pq~V~dAv~~~L-~~~~A~~gg~~~~~G~~~~~~vd~AR~a~A~LlnA~~Pe~vv~G---- 89 (410)
T TIGR01976 18 KDKDVVFFDN---PAGTQIPQSVLDAVSAAL-TRSNANRGGAYESSGRKADQVVDDAREAVADLLNAESPEEVVFG---- 89 (410)
T ss_pred CCCCEEEEEC---CCCCCCCHHHHHHHHHHH-HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC----
T ss_conf 8973689757---888877734799999998-74130137677663068999999999999997267988856767----
Q ss_pred HHHHHH--------HHHCCCCCCCCH---HHHCCHHHHH-HHHHCCCCCEEECC------CCHHHHHHHHHHHHHCCCCC
Q ss_conf 456556--------663168971004---5420267752-66640876403056------88147899764310002478
Q gi|254780486|r 102 ANMAIL--------STLPQATDLIVY---DKLVHASIRE-GINSGKAQAIAIPH------NNINSFAENINKWRKSGGKG 163 (381)
Q Consensus 102 An~~~i--------~~l~~~~d~ii~---D~~~HaSi~~-g~~ls~a~~~~f~H------nD~~~Le~~l~~~~~~~~~~ 163 (381)
T Consensus 90 ~~~T~L~~~ls~a~~~~~~~GDEvivt~LDHeaNispW~~~a~~~Ga~Vkw~~~d~~~~~L~~~~L~~Ll-------s~r 162 (410)
T TIGR01976 90 ANATSLAYLLSRALSRRWGPGDEVIVTRLDHEANISPWLQAAEDAGAKVKWARVDEADGELHPDDLASLL-------SPR 162 (410)
T ss_pred CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCC-------CCC
T ss_conf 8668999999999851268985589716766001368999998389789996336231544869982366-------882
Q ss_pred CCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 60797146215766134689999986313608986131122234777640110000134652100134656530267524
Q gi|254780486|r 164 FPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSGALVGS 243 (381)
Q Consensus 164 ~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~GG~i~~ 243 (381)
T Consensus 163 TRLVAvt~ASn~~Gs~~dl~A~~~~vh~aGA~v~VDaVh----yaPH~--L~Dvqa~-gaD~l~cSaYK~fGPH~G~l~~ 235 (410)
T TIGR01976 163 TRLVAVTAASNLLGSIVDLAALTELVHAAGALVYVDAVH----YAPHG--LIDVQAL-GADFLVCSAYKFFGPHLGILWG 235 (410)
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECHHH----HCCCC--CCCHHHH-CCCEEEECCEECCCCCEEEEEE
T ss_conf 255562344023255115889999998759879881110----04566--6413422-7887998563116885017871
Q ss_pred CCCCCCCCCCC-------CCCEECC-CCCCCCHHHHHHHHHHHHHHCC---------CHHHHHHH----HHHHHH----H
Q ss_conf 51001000012-------1100001-3577502578988789886271---------02247899----999999----8
Q gi|254780486|r 244 NKIIYDYLINY-------AKPFIYT-TSPSPILAVVACEALKLIKRKP---------ALHKSLLQ----LINITD----K 298 (381)
Q Consensus 244 ~~~ii~~l~~~-------~~~~ifs-t~l~P~~~aaa~aal~~l~~~~---------~~~~~l~~----~~~~~~----~ 298 (381)
T Consensus 236 R~~~~~~l~~~k~~~~~d~~P~r~E~GT~~yEllAG~~AavdYLa~lg~nlA~~~~gsrR~~lv~sf~~~~ayE~~l~~~ 315 (410)
T TIGR01976 236 RPELLKSLPPYKLEFSEDTGPERFELGTLQYELLAGVVAAVDYLAGLGRNLAASANGSRRERLVASFEAIEAYENRLAER 315 (410)
T ss_pred CHHHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 14664046876336778888851451455602678999999999982321068988655899999999999999999999
Q ss_pred H--HHCCCC------C------CCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCC--------CCCCCCCEEEEEC
Q ss_conf 7--641797------8------9989728999589799999999999779189862288--------8888870399962
Q gi|254780486|r 299 I--ANKKIG------F------SSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPP--------TVPINTARLRISI 356 (381)
Q Consensus 299 ~--~~~~~g------~------~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~P--------tVp~~~~rlRi~v 356 (381)
T Consensus 316 Ll~~L~~~P~~t~yG~~d~~R~~~RvPTv~F~v~~-~~P~~~~~~La~~~v~~~~GHfYA~~~~~~LGl~~~~GvvR~gL 394 (410)
T TIGR01976 316 LLAGLSDLPGVTVYGVQDEKRLAERVPTVAFTVAG-LSPQRVVRRLADQGVDVWAGHFYAVRLLRRLGLEADGGVVRVGL 394 (410)
T ss_pred HHHHHHHCCCEEEECHHHHHHHHHCCCEEEEEECC-CCHHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCCCCCEEEEEE
T ss_conf 99998748956997355786464259758897278-78799999985368633126411689998658989887389852
Q ss_pred CCCCCHHHHHHHHHHH
Q ss_conf 8789999999999999
Q gi|254780486|r 357 TLNVDEPTIVKLFDIL 372 (381)
Q Consensus 357 ~a~~t~edi~~~~~~l 372 (381)
T Consensus 395 aHY~t~eevd~l~~aL 410 (410)
T TIGR01976 395 AHYNTAEEVDRLLEAL 410 (410)
T ss_pred CCCCCHHHHHHHHHCC
T ss_conf 5779889999998509