HHsearch alignment for GI: 254780486 and conserved domain: TIGR02617
>TIGR02617 tnaA_trp_ase tryptophanase; InterPro: IPR013440 Proteins in this entry belong to the beta-eliminating lyase family and are thought to act as tryptophanases (4.1.99.1 from EC) (also known as L-tryptophan indole-lyases). The genes encoding these proteins are, as a rule, found with a tryptophanase leader peptide TnaC (IPR013439 from INTERPRO) encoded upstream. ; GO: 0009034 tryptophanase activity, 0006568 tryptophan metabolic process.
Probab=98.75 E-value=1.9e-06 Score=60.29 Aligned_cols=344 Identities=18% Similarity=0.233 Sum_probs=198.6
Q ss_pred HHHHHHHHHCCCEEEECCCC-EEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 99999999759839992897-68980344656677988999999999986378688722443688589999999984012
Q gi|254780486|r 10 EERLQKIKSKGRHRQLLRRQ-DIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF 88 (381)
Q Consensus 10 ~~~l~~~~~~g~~~~~~~~~-~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~ 88 (381)
T Consensus 21 ~~RE~A~~~aG~NPFLL~S~~VfIDLLT-----DSGTGA~~~~~~Aa~~-~GDEAY~GSR~Yy-------~La~~V~~~~ 87 (468)
T TIGR02617 21 AYREKAILEAGMNPFLLDSEDVFIDLLT-----DSGTGAVTQRMQAAMM-RGDEAYSGSRSYY-------ALADKVKEIF 87 (468)
T ss_pred HHHHHHHHHCCCCCCCCCCCCEEEEEEC-----CCCCCCCCHHHHHHHH-CCCCCCCCCHHHH-------HHHHHHHHHC
T ss_conf 8899999957898753770011343112-----6885310546677642-3641021323589-------9999976642
Q ss_pred CCCCEEEECCCCHHHHHHHHHHCCCCC----------CCC----HHHH-CCHHHHHHHHHCC---------CCCEEECCC
Q ss_conf 888516741660245655666316897----------100----4542-0267752666408---------764030568
Q gi|254780486|r 89 GFEKMLYFGSGYAANMAILSTLPQATD----------LIV----YDKL-VHASIREGINSGK---------AQAIAIPHN 144 (381)
Q Consensus 89 g~e~al~~~sG~~An~~~i~~l~~~~d----------~ii----~D~~-~HaSi~~g~~ls~---------a~~~~f~Hn 144 (381)
T Consensus 88 GY~YTIPTHQGRGAEQI~~P~LI~~~~~~~G~~~~kmV~~SNyfFDTT~~H~~-~Ng~~a~NV~~~~AFDT~~~~DfKG~ 166 (468)
T TIGR02617 88 GYQYTIPTHQGRGAEQIYIPVLIKKREAEKGLDRSKMVALSNYFFDTTQGHVQ-INGCKAKNVYTSEAFDTGVKYDFKGN 166 (468)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHH-HCCCEEEEEEEECCCCCCEECCCCCC
T ss_conf 73113687578860445665788877662589855278873232011134443-13523788775202234320133567
Q ss_pred -CHHHHHHHHHHHHHCCCCCCCEEEECCC--CCCCC---CHHHHHHHHHHHHHCCEEEEECCCC----CCCCCCCCCCEE
Q ss_conf -8147899764310002478607971462--15766---1346899999863136089861311----222347776401
Q gi|254780486|r 145 -NINSFAENINKWRKSGGKGFPWIVVESI--YSMDG---DKAPLDDLVKIANDYDGFIVVDEAH----ATGVCGPLGKGL 214 (381)
Q Consensus 145 -D~~~Le~~l~~~~~~~~~~~~~vv~egv--~Sm~G---~~apL~~i~~l~~~y~~~LivDEah----~~Gv~G~~G~G~ 214 (381)
T Consensus 167 FDl~~LE~~I~E~G~---~NV~~I-v~TiTcNSaGGQPvSlANlKAvY~IAk~yDIPVv~DSARFaENAy-FIkQRE~~Y 241 (468)
T TIGR02617 167 FDLEELEKTIAEAGP---DNVPYI-VTTITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAY-FIKQREKEY 241 (468)
T ss_pred CCHHHHHHHHHCCCC---CCCEEE-EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHH-HHHHHHHHH
T ss_conf 577888788750285---663277-775431689684267888899999986459986862302233457-777533000
Q ss_pred EEEHH-------C-CCCCCCCCCCCC-CCCCEEEEEECCCC-CCCCCCCCCCCEE-----CC--CCCCCCHHHHHHHHHH
Q ss_conf 10000-------1-346521001346-56530267524510-0100001211000-----01--3577502578988789
Q gi|254780486|r 215 THIIE-------E-RNNVIVMHSCSK-ALGSSGALVGSNKI-IYDYLINYAKPFI-----YT--TSPSPILAVVACEALK 277 (381)
Q Consensus 215 ~~~~~-------~-~~~~iv~~TlsK-a~g~~GG~i~~~~~-ii~~l~~~~~~~i-----fs--t~l~P~~~aaa~aal~ 277 (381)
T Consensus 242 ~~~si~~I~~E~Y~YaD~L~MS-AKKD~~V~~GGL~C~~Ddsf~D~y-~E~RT~CV~~EGF~TYGGL~----G~~ME~LA 315 (468)
T TIGR02617 242 ENWSIEQITREMYKYADMLAMS-AKKDALVNMGGLLCFKDDSFFDVY-TEVRTLCVVQEGFPTYGGLE----GGAMERLA 315 (468)
T ss_pred CCCCHHHHHHHHHHHCCHHHHH-HCCCCCCCCCCEEEECCCCHHHHH-HCCCCEEECCCCCCCCCCCC----CHHHHHHH
T ss_conf 0331889888865420201101-012540004762552035224553-33122232146755557776----04578887
Q ss_pred H----HHHCCCHHHHHHHHHHHHHHHHHCCCCC--CCCCCEEEEEE--------CCHHHHHHHHHHHH-HCCEEEEEE--
Q ss_conf 8----8627102247899999999876417978--99897289995--------89799999999999-779189862--
Q gi|254780486|r 278 L----IKRKPALHKSLLQLINITDKIANKKIGF--SSQSHIQSIVI--------GDNKSCLNIAKNLQ-KKGFDIRAI-- 340 (381)
Q Consensus 278 ~----l~~~~~~~~~l~~~~~~~~~~~~~~~g~--~~~s~I~~v~~--------gd~~~a~~~~~~L~-~~Gi~v~~i-- 340 (381)
T Consensus 316 vGL~~GM~~~~LAYRI~QV~YL~~~L~~~Gv~~Q~P~GGHA~FVDA~~LLPHIPa~QFPA~AL~~ELY~~AGIRaVEIGS 395 (468)
T TIGR02617 316 VGLYDGMNEDYLAYRINQVAYLVNGLEDIGVVIQQPAGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGS 395 (468)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECH
T ss_conf 51453003432778899999998557667805764998637676311027888865554888855567761711453101
Q ss_pred ----CCCCCCCCCC----EEEEEC-CCCCCHHHHHHHHHHHHHHHHH
Q ss_conf ----2888888870----399962-8789999999999999999887
Q gi|254780486|r 341 ----RPPTVPINTA----RLRISI-TLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 341 ----~~PtVp~~~~----rlRi~v-~a~~t~edi~~~~~~l~~v~~E 378 (381)
T Consensus 396 lLLGRDP~TGKQ~P~P~ELLRLTIPR~~YT~~HMDfiiEAF~~~K~~ 442 (468)
T TIGR02617 396 LLLGRDPKTGKQKPCPAELLRLTIPRATYTQTHMDFIIEAFKSVKEN 442 (468)
T ss_pred HHHCCCCCCCCCCCCHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHH
T ss_conf 42167887878888706776402662011011247899999999875