HHsearch alignment for GI: 254780486 and conserved domain: cd01494
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.88 E-value=1.7e-22 Score=160.32 Aligned_cols=160 Identities=28% Similarity=0.323 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHC--CCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHH-HHHHCCCCCEEECCCCHH----HH
Q ss_conf 999999984012--88851674166024565566631689710045420267752-666408764030568814----78
Q gi|254780486|r 77 HLELEEEAADFF--GFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIRE-GINSGKAQAIAIPHNNIN----SF 149 (381)
Q Consensus 77 ~~~lE~~lA~~~--g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~-g~~ls~a~~~~f~HnD~~----~L 149 (381)
T Consensus 2 ~~e~e~~la~~~~~~~~~~i~~~sgt~A~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDV 81 (170)
T ss_pred HHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCH
T ss_conf 89999999998489989899956699999999999727999999826843756899998659877872347787554689
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCC
Q ss_conf 99764310002478607971462157661346899999863136089861311222347776401100001346521001
Q gi|254780486|r 150 AENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHS 229 (381)
Q Consensus 150 e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~T 229 (381)
T Consensus 82 ~~~~~~---~~~~~~~~i~~~~~~~~~g~~~~l~~I~~la~~~gi~livD~a~~~g~~~~~~~~----~~~~~~D~~~~s 154 (170)
T cd01494 82 AILEEL---KAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVL----IPEGGADVVTFS 154 (170)
T ss_pred HHHHHH---HCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCHHCCCCCCCCC----CCCCCCEEEEEC
T ss_conf 999998---5599963688774014787320199997356207969999468432160666667----777898599989
Q ss_pred CCCCCCCE-EEEEEC
Q ss_conf 34656530-267524
Q gi|254780486|r 230 CSKALGSS-GALVGS 243 (381)
Q Consensus 230 lsKa~g~~-GG~i~~ 243 (381)
T Consensus 155 ~hK~lg~~g~g~l~~ 169 (170)
T cd01494 155 LHKNLGGEGGGVVIV 169 (170)
T ss_pred CCCCCCCCCEEEEEE
T ss_conf 866678985799998