Query gi|254780486|ref|YP_003064899.1| 8-amino-7-oxononanoate synthase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 381
No_of_seqs 190 out of 3620
Neff 7.3
Searched_HMMs 39220
Date Sun May 29 20:17:38 2011
Command /home/congqian_1/programs/hhpred/hhsearch -i 254780486.hhm -d /home/congqian_1/database/cdd/Cdd.hhm
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00858 bioF 8-amino-7-oxono 100.0 0 0 866.1 22.9 356 14-373 6-378 (378)
2 TIGR01825 gly_Cac_T_rel pyrido 100.0 0 0 809.2 26.1 370 9-380 1-390 (392)
3 TIGR01821 5aminolev_synth 5-am 100.0 0 0 806.2 27.2 374 1-380 1-423 (427)
4 PRK06939 2-amino-3-ketobutyrat 100.0 0 0 788.5 33.5 377 1-380 1-395 (395)
5 PRK09064 5-aminolevulinate syn 100.0 0 0 776.3 33.3 370 6-380 4-398 (406)
6 PRK13392 5-aminolevulinate syn 100.0 0 0 774.6 33.6 371 6-380 5-399 (410)
7 PRK13393 5-aminolevulinate syn 100.0 0 0 775.6 32.0 370 6-380 4-398 (404)
8 PRK05958 8-amino-7-oxononanoat 100.0 0 0 766.7 33.7 370 4-378 2-386 (387)
9 PRK07179 hypothetical protein; 100.0 0 0 755.0 30.1 368 5-380 28-401 (408)
10 TIGR01822 2am3keto_CoA 2-amino 100.0 0 0 755.1 25.5 371 7-380 3-393 (395)
11 COG0156 BioF 7-keto-8-aminopel 100.0 0 0 741.8 32.5 370 5-376 3-388 (388)
12 PRK05937 8-amino-7-oxononanoat 100.0 0 0 705.8 30.2 342 28-380 3-352 (370)
13 PRK07505 hypothetical protein; 100.0 0 0 701.4 31.0 355 17-381 37-405 (405)
14 cd06454 KBL_like KBL_like; thi 100.0 0 0 676.2 30.1 344 29-376 1-349 (349)
15 KOG1359 consensus 100.0 0 0 598.6 25.4 346 27-381 65-415 (417)
16 KOG1360 consensus 100.0 0 0 591.0 26.9 369 7-380 131-526 (570)
17 KOG1357 consensus 100.0 0 0 527.7 21.0 372 6-379 88-503 (519)
18 KOG1358 consensus 100.0 0 0 421.9 22.5 355 22-378 87-465 (467)
19 TIGR00707 argD acetylornithine 100.0 2.4E-43 0 290.4 19.1 338 8-377 6-402 (402)
20 pfam00155 Aminotran_1_2 Aminot 100.0 2.4E-41 0 277.9 22.3 324 29-372 1-351 (351)
21 TIGR01885 Orn_aminotrans ornit 100.0 2.5E-39 6.4E-44 265.3 22.4 337 15-376 28-426 (426)
22 cd06452 SepCysS Sep-tRNA:Cys-t 100.0 1.4E-37 3.7E-42 254.3 22.0 310 48-376 13-360 (361)
23 TIGR00713 hemL glutamate-1-sem 100.0 1.3E-37 3.4E-42 254.6 20.4 327 17-379 36-434 (434)
24 PTZ00125 ornithine aminotransf 100.0 3.5E-36 9E-41 245.7 27.4 337 17-380 37-415 (415)
25 cd00610 OAT_like Acetyl ornith 100.0 2.1E-36 5.3E-41 247.1 25.9 337 17-376 24-413 (413)
26 COG4992 ArgD Ornithine/acetylo 100.0 2E-36 5.1E-41 247.2 25.5 336 13-379 26-399 (404)
27 PRK06149 hypothetical protein; 100.0 2.3E-36 5.8E-41 246.9 25.2 348 9-379 565-971 (972)
28 PRK05093 argD bifunctional N-s 100.0 7.5E-36 1.9E-40 243.6 26.4 336 14-379 25-401 (403)
29 PRK02627 acetylornithine amino 100.0 7.8E-36 2E-40 243.5 26.1 334 15-379 25-397 (398)
30 PRK12389 glutamate-1-semialdeh 100.0 8.5E-36 2.2E-40 243.3 25.9 335 16-379 40-428 (429)
31 PRK00062 glutamate-1-semialdeh 100.0 7.3E-36 1.9E-40 243.7 25.3 335 16-379 39-427 (429)
32 PRK11522 putrescine--2-oxoglut 100.0 2.3E-35 5.8E-40 240.6 27.9 346 16-380 77-462 (468)
33 PRK06148 hypothetical protein; 100.0 8.3E-36 2.1E-40 243.3 25.2 348 9-379 606-1013(1015)
34 PRK09044 consensus 100.0 3.7E-35 9.5E-40 239.3 27.8 342 14-379 27-418 (418)
35 TIGR03246 arg_catab_astC succi 100.0 4.6E-35 1.2E-39 238.7 27.0 337 13-379 19-396 (397)
36 PRK08088 4-aminobutyrate amino 100.0 5.2E-35 1.3E-39 238.4 27.2 357 1-379 2-425 (426)
37 PRK08593 4-aminobutyrate amino 100.0 1.1E-34 2.7E-39 236.4 28.8 343 17-381 33-435 (448)
38 PRK00615 glutamate-1-semialdeh 100.0 5.8E-36 1.5E-40 244.3 21.9 333 17-379 41-429 (433)
39 PRK12381 bifunctional succinyl 100.0 6.6E-35 1.7E-39 237.7 26.5 336 14-379 24-400 (406)
40 PRK00854 rocD ornithine--oxo-a 100.0 6.3E-35 1.6E-39 237.8 26.2 333 17-377 32-403 (404)
41 PRK06173 adenosylmethionine--8 100.0 1.9E-34 4.9E-39 234.8 28.4 340 16-379 31-426 (429)
42 COG0160 GabT 4-aminobutyrate a 100.0 2.3E-34 6E-39 234.3 28.8 342 17-379 44-446 (447)
43 PRK06942 glutamate-1-semialdeh 100.0 2.6E-35 6.6E-40 240.3 23.8 335 16-379 37-425 (425)
44 PRK07030 adenosylmethionine--8 100.0 4.9E-34 1.2E-38 232.3 30.2 340 16-379 34-447 (467)
45 PRK02936 argD acetylornithine 100.0 4.8E-35 1.2E-39 238.6 24.5 331 14-376 14-377 (377)
46 PRK06058 4-aminobutyrate amino 100.0 1.8E-34 4.5E-39 235.0 27.4 343 17-379 44-446 (446)
47 PRK05964 adenosylmethionine--8 100.0 3.3E-34 8.3E-39 233.4 28.6 341 15-379 28-421 (421)
48 PRK03244 argD acetylornithine 100.0 1.1E-34 2.9E-39 236.3 26.1 333 16-380 30-396 (398)
49 PRK04073 rocD ornithine--oxo-a 100.0 1.7E-34 4.5E-39 235.1 26.5 331 16-377 27-396 (396)
50 PRK05630 adenosylmethionine--8 100.0 2E-34 5E-39 234.8 26.2 342 16-377 29-421 (423)
51 PRK09792 PLP-dependent GABA am 100.0 5.8E-34 1.5E-38 231.8 28.4 355 1-378 1-421 (421)
52 PRK06917 hypothetical protein; 100.0 3E-34 7.6E-39 233.6 26.8 349 16-379 18-438 (447)
53 PRK01278 argD bifunctional N-s 100.0 2.2E-34 5.7E-39 234.4 25.9 336 13-379 15-389 (389)
54 PRK06777 4-aminobutyrate amino 100.0 9.3E-34 2.4E-38 230.6 28.9 340 16-377 27-420 (421)
55 PRK07986 adenosylmethionine--8 100.0 4E-34 1E-38 232.8 26.7 340 15-379 29-424 (428)
56 PRK08117 4-aminobutyrate amino 100.0 5.5E-34 1.4E-38 232.0 26.2 341 17-379 29-428 (429)
57 TIGR03372 putres_am_tran putre 100.0 6.8E-34 1.7E-38 231.4 26.5 335 21-376 67-442 (442)
58 PRK07678 aminotransferase; Val 100.0 1.6E-33 4.2E-38 229.0 28.3 347 17-380 35-451 (451)
59 PRK04013 argD acetylornithine/ 100.0 5.1E-35 1.3E-39 238.4 20.4 334 6-379 1-361 (364)
60 PRK07495 4-aminobutyrate amino 100.0 2E-33 5.2E-38 228.5 28.3 342 17-380 26-421 (422)
61 PRK07894 consensus 100.0 6.2E-34 1.6E-38 231.7 25.1 340 17-380 36-430 (430)
62 PRK08466 consensus 100.0 4.4E-33 1.1E-37 226.4 29.2 341 16-380 33-430 (430)
63 PRK08360 4-aminobutyrate amino 100.0 1.3E-33 3.3E-38 229.7 26.3 342 15-380 27-428 (443)
64 PRK05965 hypothetical protein; 100.0 2.2E-33 5.7E-38 228.2 27.2 342 17-379 34-448 (459)
65 PRK09221 beta alanine--pyruvat 100.0 6.4E-33 1.6E-37 225.4 28.8 342 15-379 35-444 (445)
66 PRK07483 hypothetical protein; 100.0 7.1E-33 1.8E-37 225.1 28.5 349 16-379 17-438 (443)
67 PRK03715 argD bifunctional N-s 100.0 4.3E-33 1.1E-37 226.4 27.4 333 16-379 23-394 (395)
68 PRK07481 hypothetical protein; 100.0 3.9E-33 1E-37 226.7 27.1 346 16-380 29-446 (448)
69 PRK06541 hypothetical protein; 100.0 4.2E-33 1.1E-37 226.5 27.2 347 16-379 39-456 (460)
70 PRK07482 hypothetical protein; 100.0 4.5E-33 1.1E-37 226.3 26.7 345 16-379 37-455 (461)
71 PRK06062 hypothetical protein; 100.0 6.7E-33 1.7E-37 225.2 27.3 342 16-381 23-431 (434)
72 PRK06916 adenosylmethionine--8 100.0 1.2E-32 3.1E-37 223.7 28.5 340 17-380 46-459 (462)
73 PRK06938 diaminobutyrate--2-ox 100.0 5.4E-33 1.4E-37 225.8 26.6 341 17-379 51-461 (464)
74 PRK07323 consensus 100.0 6.5E-33 1.7E-37 225.3 27.0 337 17-379 46-443 (443)
75 PRK06918 4-aminobutyrate amino 100.0 1.5E-32 3.9E-37 223.0 28.8 339 17-378 43-444 (454)
76 PRK09264 diaminobutyrate--2-ox 100.0 6.9E-33 1.8E-37 225.1 26.9 344 17-379 27-417 (426)
77 PRK13360 omega amino acid--pyr 100.0 6.1E-33 1.6E-37 225.5 26.5 344 13-379 29-440 (441)
78 PRK06082 4-aminobutyrate amino 100.0 1.2E-32 3E-37 223.7 27.9 341 17-379 61-453 (460)
79 PRK06105 aminotransferase; Pro 100.0 4.6E-32 1.2E-36 220.0 30.0 343 16-379 35-450 (460)
80 PRK07480 putative aminotransfe 100.0 3.9E-32 1E-36 220.4 29.2 342 16-378 40-451 (459)
81 PRK05639 4-aminobutyrate amino 100.0 2.2E-32 5.6E-37 222.0 27.8 343 16-379 40-444 (457)
82 PRK06943 adenosylmethionine--8 100.0 3.8E-33 9.7E-38 226.8 23.8 339 16-378 40-445 (452)
83 PRK12403 putative aminotransfe 100.0 3.7E-32 9.4E-37 220.6 28.7 340 17-378 42-452 (460)
84 PRK05769 4-aminobutyrate amino 100.0 3.4E-32 8.7E-37 220.8 28.3 338 17-379 43-441 (442)
85 PRK08742 adenosylmethionine--8 100.0 3.2E-32 8.2E-37 221.0 27.8 341 15-379 50-468 (472)
86 COG0001 HemL Glutamate-1-semia 100.0 2.3E-32 6E-37 221.8 27.0 338 17-380 41-430 (432)
87 PRK04612 argD bifunctional N-s 100.0 1.4E-32 3.6E-37 223.2 24.8 338 13-379 24-404 (408)
88 PRK04260 acetylornithine amino 100.0 2.7E-33 6.8E-38 227.7 20.9 334 8-376 8-375 (375)
89 PRK07036 hypothetical protein; 100.0 9.6E-32 2.5E-36 218.0 28.6 342 16-379 38-453 (466)
90 PRK06931 diaminobutyrate--2-ox 100.0 3.1E-32 8E-37 221.0 26.0 342 17-379 41-450 (454)
91 PRK07046 aminotransferase; Val 100.0 7.5E-32 1.9E-36 218.7 24.7 332 17-380 62-451 (452)
92 PRK06209 glutamate-1-semialdeh 100.0 6.3E-32 1.6E-36 219.2 22.3 327 17-380 36-407 (431)
93 PRK08555 consensus 100.0 5.7E-31 1.4E-35 213.2 27.1 339 17-379 40-443 (443)
94 PRK08297 L-lysine aminotransfe 100.0 2.9E-31 7.4E-36 215.0 24.7 341 16-379 40-448 (449)
95 TIGR03251 LAT_fam L-lysine 6-t 100.0 2.4E-31 6.1E-36 215.5 18.8 343 13-375 21-431 (431)
96 cd06502 TA_like Low-specificit 100.0 7.1E-31 1.8E-35 212.6 20.8 316 33-375 1-338 (338)
97 KOG1402 consensus 100.0 6.4E-30 1.6E-34 206.6 20.3 330 17-377 47-426 (427)
98 COG0161 BioA Adenosylmethionin 100.0 9.2E-28 2.3E-32 193.2 24.0 337 16-379 31-444 (449)
99 PRK10534 L-threonine aldolase; 100.0 5.2E-28 1.3E-32 194.8 20.5 317 31-378 1-333 (333)
100 PRK02731 histidinol-phosphate 100.0 1.6E-25 4.1E-30 179.3 23.2 319 29-378 32-366 (367)
101 PRK08153 histidinol-phosphate 99.9 3.4E-25 8.8E-30 177.2 23.4 318 31-379 35-367 (370)
102 PRK00950 histidinol-phosphate 99.9 2E-25 5E-30 178.7 22.1 317 26-377 32-369 (369)
103 TIGR00700 GABAtrnsam 4-aminobu 99.9 1.3E-25 3.3E-30 179.8 20.8 337 16-378 20-427 (427)
104 pfam00202 Aminotran_3 Aminotra 99.9 1.2E-25 3.1E-30 180.0 17.8 268 17-298 4-311 (338)
105 PRK06358 threonine-phosphate d 99.9 5.3E-24 1.3E-28 169.8 23.1 316 26-377 16-354 (354)
106 PRK03566 consensus 99.9 4.6E-24 1.2E-28 170.1 22.4 313 29-378 32-364 (365)
107 KOG1404 consensus 99.9 1.1E-24 2.9E-29 173.9 19.2 339 9-372 30-432 (442)
108 PRK04870 histidinol-phosphate 99.9 1.5E-23 3.7E-28 167.0 24.6 338 1-376 3-356 (356)
109 PRK04152 consensus 99.9 6E-24 1.5E-28 169.4 21.9 320 26-376 28-364 (364)
110 KOG1401 consensus 99.9 3.1E-23 7.9E-28 165.0 23.5 324 20-380 47-432 (433)
111 PRK03158 histidinol-phosphate 99.9 1.1E-23 2.9E-28 167.7 21.1 314 29-376 29-359 (359)
112 PRK03321 putative aminotransfe 99.9 9.7E-24 2.5E-28 168.1 20.5 316 28-377 21-350 (352)
113 PRK05166 histidinol-phosphate 99.9 1.6E-23 4.2E-28 166.7 21.6 317 27-379 36-374 (374)
114 TIGR02407 ectoine_ectB diamino 99.9 9E-23 2.3E-27 162.1 24.8 329 17-378 23-413 (413)
115 PRK07392 threonine-phosphate d 99.9 1.9E-23 4.8E-28 166.3 20.8 317 26-378 19-357 (358)
116 PRK06225 aspartate aminotransf 99.9 5.7E-23 1.4E-27 163.3 21.8 327 29-379 22-372 (375)
117 PRK08636 aspartate aminotransf 99.9 1.4E-21 3.5E-26 154.7 28.6 340 27-381 31-403 (403)
118 PRK08056 threonine-phosphate d 99.9 3.5E-23 8.9E-28 164.7 20.4 316 27-378 18-355 (356)
119 TIGR01141 hisC histidinol-phos 99.9 1.7E-23 4.3E-28 166.6 17.1 318 29-375 28-377 (377)
120 PRK01533 histidinol-phosphate 99.9 2E-22 5E-27 160.0 22.6 315 27-379 27-356 (366)
121 PRK09105 putative aminotransfe 99.9 6.4E-23 1.6E-27 163.0 20.0 310 29-377 46-372 (374)
122 PRK06375 consensus 99.9 1.9E-21 4.8E-26 153.9 27.5 348 5-379 13-381 (381)
123 PRK03317 histidinol-phosphate 99.9 9.2E-23 2.3E-27 162.0 20.7 319 31-380 28-367 (369)
124 PRK05387 histidinol-phosphate 99.9 1.9E-22 5E-27 160.0 22.2 313 27-377 22-352 (353)
125 PRK07212 consensus 99.9 1.9E-21 4.8E-26 153.8 27.0 328 27-376 29-377 (378)
126 COG0079 HisC Histidinol-phosph 99.9 4.7E-22 1.2E-26 157.6 23.9 316 29-379 22-355 (356)
127 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 2.9E-22 7.4E-27 158.9 22.1 332 27-380 15-382 (386)
128 COG2008 GLY1 Threonine aldolas 99.9 1.3E-22 3.4E-27 161.0 19.9 314 32-376 2-341 (342)
129 KOG1368 consensus 99.9 6.8E-24 1.7E-28 169.1 12.7 307 47-378 37-369 (384)
130 PRK05957 aspartate aminotransf 99.9 1.8E-21 4.6E-26 154.0 25.0 337 27-379 25-386 (389)
131 PRK02610 histidinol-phosphate 99.9 8.2E-22 2.1E-26 156.1 23.0 338 7-379 3-369 (369)
132 PRK08068 transaminase; Reviewe 99.9 2.7E-21 6.8E-26 152.9 25.2 331 27-375 30-386 (389)
133 PRK09295 selenocysteine lyase; 99.9 8.5E-21 2.2E-25 149.8 27.5 349 13-379 5-405 (406)
134 PRK06290 aspartate aminotransf 99.9 1.5E-21 3.8E-26 154.5 23.3 345 12-380 29-404 (411)
135 PRK09148 aminotransferase; Val 99.9 5E-21 1.3E-25 151.2 25.7 347 9-380 19-393 (406)
136 PRK05764 aspartate aminotransf 99.9 7.3E-21 1.9E-25 150.2 26.2 334 27-380 29-389 (389)
137 PRK06348 aspartate aminotransf 99.9 6.7E-22 1.7E-26 156.7 20.7 350 8-375 5-382 (383)
138 PRK08175 aminotransferase; Val 99.9 8.4E-21 2.1E-25 149.8 26.3 351 5-379 13-390 (395)
139 PRK07777 aminotransferase; Val 99.9 4.4E-21 1.1E-25 151.6 24.2 332 26-377 21-385 (386)
140 PRK07367 consensus 99.9 1.2E-20 3.1E-25 148.9 26.0 346 7-379 14-385 (385)
141 PRK09276 aspartate aminotransf 99.9 4.5E-21 1.2E-25 151.5 23.7 331 27-375 29-385 (385)
142 PRK05794 consensus 99.9 1.5E-20 3.9E-25 148.2 26.3 342 9-380 18-397 (397)
143 PRK07778 consensus 99.9 4.4E-21 1.1E-25 151.6 23.5 343 11-377 20-385 (386)
144 PRK07681 aspartate aminotransf 99.9 6.1E-21 1.5E-25 150.7 23.7 334 26-375 29-385 (399)
145 PRK05942 aspartate aminotransf 99.9 6.1E-21 1.5E-25 150.7 23.2 335 26-378 32-392 (394)
146 PRK06108 aspartate aminotransf 99.9 6.6E-21 1.7E-25 150.5 23.3 333 27-377 22-381 (382)
147 PRK06425 histidinol-phosphate 99.9 1.2E-21 3.1E-26 155.0 19.4 303 30-377 17-332 (332)
148 PRK08361 aspartate aminotransf 99.9 1.1E-21 2.9E-26 155.2 19.3 360 1-379 1-390 (390)
149 cd06453 SufS_like Cysteine des 99.9 4.8E-21 1.2E-25 151.4 22.3 311 44-372 11-373 (373)
150 PRK06056 consensus 99.9 1.7E-20 4.2E-25 148.0 24.9 343 9-379 22-401 (402)
151 PRK08443 consensus 99.9 2.3E-20 5.8E-25 147.1 25.3 334 27-379 27-387 (388)
152 PRK06959 putative threonine-ph 99.9 7.6E-22 1.9E-26 156.3 17.7 302 27-381 22-336 (339)
153 PRK07683 aminotransferase A; V 99.9 2.1E-20 5.4E-25 147.3 24.7 354 9-379 5-384 (387)
154 TIGR03540 DapC_direct LL-diami 99.9 9.4E-21 2.4E-25 149.5 22.8 330 27-375 27-383 (383)
155 PRK03967 histidinol-phosphate 99.9 9.4E-21 2.4E-25 149.5 22.4 313 26-380 15-336 (337)
156 PRK08069 consensus 99.9 3.9E-20 1E-24 145.6 25.4 332 27-377 28-390 (390)
157 TIGR03392 FeS_syn_CsdA cystein 99.9 6.5E-20 1.7E-24 144.3 26.5 345 14-380 4-397 (398)
158 PRK08912 hypothetical protein; 99.9 1.6E-20 4.1E-25 148.0 23.1 333 27-377 24-385 (387)
159 PRK07310 consensus 99.9 5.7E-20 1.4E-24 144.6 25.8 350 2-378 11-392 (395)
160 PRK10874 cysteine sulfinate de 99.9 5.2E-20 1.3E-24 144.9 25.5 345 13-379 6-399 (401)
161 PRK12414 putative aminotransfe 99.9 2.4E-20 6.1E-25 147.0 23.2 328 27-374 27-383 (384)
162 PRK09082 putative aminotransfe 99.9 3.5E-20 8.9E-25 146.0 23.2 330 27-375 28-386 (386)
163 PRK06107 aspartate aminotransf 99.9 1.5E-19 3.8E-24 142.0 26.4 342 8-379 20-401 (402)
164 PRK02948 cysteine desulfurase; 99.9 5.3E-20 1.3E-24 144.8 23.8 319 44-379 12-375 (381)
165 PRK07324 transaminase; Validat 99.9 2.7E-20 6.8E-25 146.7 21.5 343 9-381 8-373 (373)
166 cd01494 AAT_I Aspartate aminot 99.9 1.7E-22 4.4E-27 160.3 10.3 160 77-243 2-169 (170)
167 PRK06507 consensus 99.9 2.7E-19 6.8E-24 140.5 26.4 344 9-379 19-399 (400)
168 PRK08960 hypothetical protein; 99.9 1.6E-19 4E-24 141.9 25.2 330 27-377 30-386 (387)
169 PRK07337 aminotransferase; Val 99.9 1.5E-19 3.9E-24 142.0 25.0 339 9-376 18-387 (388)
170 PRK08363 alanine aminotransfer 99.9 6E-20 1.5E-24 144.5 22.7 345 9-378 18-394 (398)
171 PRK04781 histidinol-phosphate 99.9 2.2E-20 5.6E-25 147.2 20.5 331 6-377 7-360 (362)
172 PRK07682 hypothetical protein; 99.9 9.8E-20 2.5E-24 143.2 23.8 334 27-379 18-377 (378)
173 PRK07568 aspartate aminotransf 99.9 3E-19 7.6E-24 140.1 25.9 337 27-380 28-394 (396)
174 cd00609 AAT_like Aspartate ami 99.9 4E-20 1E-24 145.6 21.2 325 33-374 2-350 (350)
175 PRK01688 histidinol-phosphate 99.9 7.6E-20 1.9E-24 143.8 22.1 304 27-374 26-352 (355)
176 COG0112 GlyA Glycine/serine hy 99.9 4.5E-20 1.1E-24 145.3 20.9 330 34-379 32-391 (413)
177 PRK07543 consensus 99.9 6.3E-19 1.6E-23 138.1 26.4 334 27-379 29-399 (400)
178 PRK06836 aspartate aminotransf 99.9 9.6E-19 2.5E-23 137.0 27.2 330 26-380 31-394 (396)
179 PRK07550 hypothetical protein; 99.9 1.3E-19 3.4E-24 142.3 22.8 333 25-375 26-385 (387)
180 PRK08354 putative aminotransfe 99.9 9.2E-20 2.3E-24 143.3 21.6 296 27-376 6-310 (312)
181 PRK07309 aromatic amino acid a 99.9 6E-19 1.5E-23 138.3 25.6 355 9-379 7-389 (390)
182 PRK08362 consensus 99.9 1.9E-19 4.9E-24 141.3 22.7 334 27-379 24-386 (389)
183 PRK00011 glyA serine hydroxyme 99.9 4.3E-20 1.1E-24 145.4 19.3 334 30-380 26-390 (415)
184 cd00615 Orn_deC_like Ornithine 99.9 2.8E-20 7.1E-25 146.5 18.2 268 10-296 3-288 (294)
185 PRK07366 succinyldiaminopimela 99.9 4.6E-19 1.2E-23 139.0 24.3 341 9-376 18-388 (388)
186 PRK07908 hypothetical protein; 99.9 2.1E-19 5.4E-24 141.1 22.6 310 27-377 19-345 (346)
187 pfam00266 Aminotran_5 Aminotra 99.9 2.5E-19 6.4E-24 140.6 22.7 308 44-368 11-371 (371)
188 TIGR03537 DapC succinyldiamino 99.9 1.4E-19 3.6E-24 142.2 21.2 322 30-375 1-350 (350)
189 cd00378 SHMT Serine-glycine hy 99.9 1.3E-19 3.4E-24 142.3 21.1 329 34-380 25-387 (402)
190 PRK05664 threonine-phosphate d 99.9 8.9E-20 2.3E-24 143.4 19.9 301 27-379 18-329 (330)
191 TIGR03403 nifS_epsilon cystein 99.9 7.7E-19 2E-23 137.6 24.7 318 44-380 11-377 (382)
192 PRK13034 serine hydroxymethylt 99.9 1.4E-19 3.5E-24 142.3 20.6 328 34-378 37-395 (422)
193 TIGR03538 DapC_gpp succinyldia 99.9 6.2E-19 1.6E-23 138.2 23.6 344 10-376 13-394 (394)
194 COG0436 Aspartate/tyrosine/aro 99.9 1.9E-18 4.9E-23 135.1 26.0 335 29-379 28-392 (393)
195 PRK04635 histidinol-phosphate 99.9 1.5E-19 3.8E-24 142.0 20.1 301 27-376 22-345 (346)
196 PRK07865 N-succinyldiaminopime 99.9 2E-18 5.1E-23 135.0 25.3 318 27-373 25-363 (364)
197 PRK03262 consensus 99.9 2.1E-19 5.3E-24 141.1 20.3 302 27-374 26-352 (355)
198 TIGR03402 FeS_nifS cysteine de 99.9 1.7E-18 4.4E-23 135.4 25.0 320 44-380 11-374 (379)
199 COG0520 csdA Selenocysteine ly 99.9 3.8E-18 9.6E-23 133.3 26.3 321 41-377 30-404 (405)
200 TIGR03539 DapC_actino succinyl 99.9 1.8E-18 4.5E-23 135.3 24.6 333 3-372 3-356 (357)
201 PRK06220 consensus 99.9 3.7E-18 9.4E-23 133.4 26.2 330 27-378 29-380 (384)
202 PRK07590 L,L-diaminopimelate a 99.9 1.2E-18 3.2E-23 136.3 23.5 334 26-376 31-409 (409)
203 PRK06207 aspartate aminotransf 99.9 7.6E-19 1.9E-23 137.6 22.2 325 32-381 42-406 (406)
204 PRK06575 consensus 99.9 4.4E-18 1.1E-22 132.9 25.9 348 5-379 15-399 (399)
205 KOG1403 consensus 99.9 3.5E-20 9E-25 145.9 14.8 335 27-380 37-439 (452)
206 PRK09147 aminotransferase; Pro 99.8 8E-18 2E-22 131.2 25.4 343 10-377 13-396 (397)
207 PRK11658 UDP-4-amino-4-deoxy-L 99.8 3.3E-18 8.4E-23 133.6 22.4 304 45-378 13-379 (379)
208 pfam01276 OKR_DC_1 Orn/Lys/Arg 99.8 2.7E-19 6.8E-24 140.5 16.6 258 10-280 4-292 (417)
209 TIGR03588 PseC UDP-4-keto-6-de 99.8 3E-18 7.6E-23 133.9 21.8 304 46-376 10-380 (380)
210 pfam01212 Beta_elim_lyase Beta 99.8 1.1E-19 2.9E-24 142.8 13.6 222 44-278 10-246 (288)
211 TIGR00709 dat 2,4-diaminobutyr 99.8 7.8E-18 2E-22 131.3 22.7 343 16-379 26-439 (445)
212 PRK09265 aminotransferase AlaT 99.8 8.9E-18 2.3E-22 131.0 21.7 343 9-379 21-402 (404)
213 PRK05839 hypothetical protein; 99.8 3.5E-17 9E-22 127.2 24.6 327 27-378 22-374 (376)
214 PTZ00094 serine hydroxymethylt 99.8 6E-18 1.5E-22 132.0 20.5 325 34-377 37-404 (450)
215 TIGR03542 DAPAT_plant LL-diami 99.8 1.8E-17 4.5E-22 129.1 22.4 352 6-376 16-402 (402)
216 PRK06234 methionine gamma-lyas 99.8 2.9E-18 7.3E-23 134.0 18.0 294 65-376 57-398 (399)
217 COG1167 ARO8 Transcriptional r 99.8 3.9E-17 9.9E-22 127.0 23.7 358 7-380 43-457 (459)
218 PRK13580 serine hydroxymethylt 99.8 6.3E-18 1.6E-22 131.9 19.7 328 34-379 57-448 (493)
219 pfam00464 SHMT Serine hydroxym 99.8 5.4E-18 1.4E-22 132.3 18.8 318 34-372 26-380 (380)
220 COG0399 WecE Predicted pyridox 99.8 1.7E-17 4.3E-22 129.2 20.6 304 46-378 15-373 (374)
221 cd06451 AGAT_like Alanine-glyo 99.8 5.2E-17 1.3E-21 126.2 22.5 285 74-377 31-356 (356)
222 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.8 1.7E-16 4.4E-21 122.9 25.1 304 45-376 10-374 (375)
223 PRK07503 methionine gamma-lyas 99.8 2E-17 5E-22 128.8 18.8 293 65-375 58-397 (403)
224 pfam01041 DegT_DnrJ_EryC1 DegT 99.8 1.1E-16 2.7E-21 124.2 22.2 299 47-373 6-363 (363)
225 PRK08249 cystathionine gamma-s 99.8 2.6E-17 6.7E-22 128.0 18.5 296 64-379 56-398 (398)
226 cd00614 CGS_like CGS_like: Cys 99.8 2.8E-17 7.2E-22 127.8 17.8 289 64-376 32-368 (369)
227 cd00616 AHBA_syn 3-amino-5-hyd 99.8 1.6E-16 4E-21 123.2 21.3 281 74-373 17-352 (352)
228 PRK08247 cystathionine gamma-s 99.8 7.4E-17 1.9E-21 125.2 19.0 283 74-374 51-364 (366)
229 PRK06767 methionine gamma-lyas 99.8 9.1E-17 2.3E-21 124.7 19.4 290 66-374 55-385 (386)
230 PRK06176 cystathionine gamma-s 99.8 3.7E-17 9.6E-22 127.1 17.3 283 74-374 49-378 (379)
231 TIGR02539 SepCysS Sep-tRNA:Cys 99.8 2.6E-17 6.6E-22 128.1 16.4 316 47-379 19-380 (381)
232 PRK13479 2-aminoethylphosphona 99.8 9.7E-16 2.5E-20 118.3 24.2 291 73-380 35-365 (368)
233 PRK07504 O-succinylhomoserine 99.8 8.2E-17 2.1E-21 125.0 18.4 291 65-375 58-396 (397)
234 PRK05968 hypothetical protein; 99.8 7.5E-17 1.9E-21 125.2 18.1 292 63-374 54-386 (389)
235 pfam01053 Cys_Met_Meta_PP Cys/ 99.8 6.4E-17 1.6E-21 125.6 17.7 289 64-376 44-380 (381)
236 PRK09028 cystathionine beta-ly 99.8 1.6E-16 4.1E-21 123.1 19.7 291 66-380 55-389 (394)
237 COG1104 NifS Cysteine sulfinat 99.8 2.8E-15 7.3E-20 115.3 25.3 321 39-379 4-378 (386)
238 COG1103 Archaea-specific pyrid 99.8 1.1E-15 2.9E-20 117.9 22.6 315 47-379 28-381 (382)
239 PRK08114 cystathionine beta-ly 99.8 3.6E-16 9.2E-21 120.9 19.3 290 66-375 56-394 (395)
240 PRK08861 cystathionine gamma-s 99.8 2.4E-16 6.2E-21 122.0 18.3 286 74-376 52-385 (388)
241 PRK07811 cystathionine gamma-s 99.8 4.8E-16 1.2E-20 120.1 19.4 288 66-377 52-384 (386)
242 PRK06460 hypothetical protein; 99.8 2.3E-16 5.8E-21 122.2 17.5 283 74-377 44-373 (375)
243 PRK09440 avtA valine--pyruvate 99.8 4.9E-15 1.3E-19 113.9 24.3 326 26-379 27-412 (416)
244 PRK05967 cystathionine beta-ly 99.7 4.5E-16 1.1E-20 120.3 18.8 284 74-378 63-388 (392)
245 PRK08133 O-succinylhomoserine 99.7 3.3E-16 8.4E-21 121.2 17.2 289 64-376 53-389 (391)
246 PRK05613 O-acetylhomoserine am 99.7 2.9E-15 7.3E-20 115.3 22.0 291 64-377 61-435 (437)
247 PRK08045 cystathionine gamma-s 99.7 1.3E-15 3.4E-20 117.4 20.2 285 74-379 51-383 (386)
248 PRK07810 O-succinylhomoserine 99.7 3.9E-16 1E-20 120.7 17.3 289 64-376 65-405 (406)
249 PRK13520 L-tyrosine decarboxyl 99.7 2E-14 5.1E-19 110.1 25.7 285 74-377 58-374 (375)
250 PRK07050 cystathionine beta-ly 99.7 6.6E-16 1.7E-20 119.3 17.7 287 73-376 63-393 (394)
251 PRK05939 hypothetical protein; 99.7 2.9E-15 7.3E-20 115.3 20.8 290 65-376 39-393 (396)
252 TIGR01979 sufS cysteine desulf 99.7 1.2E-15 3E-20 117.7 18.6 321 26-377 14-406 (409)
253 PRK07671 cystathionine beta-ly 99.7 1.2E-15 3E-20 117.8 18.1 281 74-376 49-376 (377)
254 PRK08574 cystathionine gamma-s 99.7 1.8E-15 4.7E-20 116.5 18.7 289 66-374 47-383 (384)
255 PRK08064 cystathionine beta-ly 99.7 1.4E-15 3.6E-20 117.3 18.0 286 74-377 53-385 (390)
256 PRK07812 O-acetylhomoserine am 99.7 7.5E-15 1.9E-19 112.7 21.4 290 65-374 62-431 (436)
257 PRK08776 cystathionine gamma-s 99.7 2.3E-15 5.9E-20 115.9 18.8 287 74-377 59-393 (405)
258 PRK08248 O-acetylhomoserine am 99.7 3.5E-15 8.9E-20 114.8 19.2 293 65-375 57-428 (431)
259 PRK08134 O-acetylhomoserine am 99.7 5.1E-15 1.3E-19 113.8 19.7 294 65-376 57-429 (433)
260 TIGR03301 PhnW-AepZ 2-aminoeth 99.7 2.4E-14 6.1E-19 109.6 23.0 282 74-376 30-355 (355)
261 PRK06084 O-acetylhomoserine am 99.7 5.7E-15 1.5E-19 113.5 19.5 291 65-373 51-421 (424)
262 PRK07049 methionine gamma-lyas 99.7 7.6E-15 1.9E-19 112.7 19.9 294 65-377 76-425 (427)
263 PRK07582 cystathionine gamma-l 99.7 1.6E-15 4.1E-20 116.9 16.3 283 67-374 48-368 (370)
264 COG0626 MetC Cystathionine bet 99.7 4.3E-15 1.1E-19 114.2 18.0 286 74-378 62-394 (396)
265 PRK07269 cystathionine gamma-s 99.7 1.3E-14 3.3E-19 111.2 19.9 281 74-376 53-362 (364)
266 PRK13578 ornithine decarboxyla 99.7 5.8E-14 1.5E-18 107.2 23.1 293 73-376 172-563 (720)
267 TIGR01977 am_tr_V_EF2568 cyste 99.7 1.9E-14 4.8E-19 110.2 20.2 310 45-375 13-384 (384)
268 PRK06855 aminotransferase; Val 99.7 6.8E-13 1.7E-17 100.5 26.8 214 9-241 20-255 (433)
269 COG1982 LdcC Arginine/lysine/o 99.7 1.7E-14 4.5E-19 110.4 18.6 343 8-374 11-404 (557)
270 cd06450 DOPA_deC_like DOPA dec 99.7 2E-13 5.1E-18 103.8 23.9 270 74-374 33-344 (345)
271 PRK05994 O-acetylhomoserine am 99.7 3E-14 7.6E-19 109.0 19.6 291 65-377 56-425 (426)
272 PRK13355 bifunctional HTH-doma 99.7 1.4E-13 3.7E-18 104.7 21.8 342 10-378 135-514 (518)
273 COG0075 Serine-pyruvate aminot 99.7 1.9E-13 4.9E-18 103.9 22.2 312 44-380 16-365 (383)
274 TIGR03235 DNA_S_dndA cysteine 99.6 2.3E-13 5.8E-18 103.5 21.3 279 44-339 10-321 (354)
275 KOG1405 consensus 99.6 1.5E-13 3.9E-18 104.6 20.0 339 17-379 64-484 (484)
276 PRK06702 O-acetylhomoserine am 99.6 1.5E-13 3.8E-18 104.7 18.5 294 63-374 52-424 (432)
277 TIGR00699 GABAtrns_euk 4-amino 99.6 1.2E-13 3.1E-18 105.1 17.9 330 17-376 47-469 (469)
278 TIGR01326 OAH_OAS_sulfhy O-ace 99.6 1.5E-13 3.9E-18 104.6 18.3 296 53-372 36-433 (434)
279 KOG0257 consensus 99.6 2.9E-13 7.3E-18 102.9 19.5 313 47-374 48-415 (420)
280 PRK02769 histidine decarboxyla 99.6 1.9E-12 4.8E-17 97.8 23.5 298 59-380 44-374 (380)
281 PRK08637 hypothetical protein; 99.6 1.1E-12 2.8E-17 99.2 20.6 300 37-380 38-386 (386)
282 PRK06434 cystathionine gamma-l 99.6 2.2E-13 5.7E-18 103.5 16.8 287 64-377 56-383 (384)
283 TIGR03576 pyridox_MJ0158 pyrid 99.6 1.7E-12 4.3E-17 98.0 20.3 325 5-375 3-344 (346)
284 KOG1549 consensus 99.6 1.7E-12 4.2E-17 98.1 19.3 321 29-378 44-418 (428)
285 COG1168 MalY Bifunctional PLP- 99.5 1.4E-11 3.7E-16 92.2 22.2 350 12-379 6-387 (388)
286 TIGR01325 O_suc_HS_sulf O-succ 99.5 1E-12 2.7E-17 99.4 14.5 297 49-375 29-385 (386)
287 PRK00451 glycine dehydrogenase 99.5 6E-12 1.5E-16 94.6 18.1 318 38-377 71-449 (449)
288 cd00617 Tnase_like Tryptophana 99.5 5.9E-11 1.5E-15 88.4 20.9 349 11-380 1-410 (431)
289 KOG0053 consensus 99.5 1.6E-11 4.2E-16 91.9 17.7 285 74-379 76-407 (409)
290 TIGR01265 tyr_nico_aTase tyros 99.5 1.4E-10 3.5E-15 86.2 21.6 318 28-374 37-418 (424)
291 PRK04366 glycine dehydrogenase 99.4 8.1E-11 2.1E-15 87.6 20.1 331 29-380 72-453 (490)
292 PRK13238 tnaA tryptophanase; P 99.4 2.8E-10 7.1E-15 84.2 22.8 354 5-379 20-435 (461)
293 PRK13237 tyrosine phenol-lyase 99.4 2.4E-10 6.2E-15 84.6 22.4 354 6-380 21-435 (459)
294 TIGR01140 CobD L-threonine-O-3 99.4 1.6E-11 4.1E-16 91.9 14.8 316 26-375 2-349 (349)
295 COG2873 MET17 O-acetylhomoseri 99.4 1.3E-10 3.2E-15 86.4 18.1 163 62-242 52-222 (426)
296 TIGR01328 met_gam_lyase methio 99.4 7.4E-11 1.9E-15 87.8 15.7 289 67-379 54-392 (392)
297 KOG0634 consensus 99.4 1.7E-09 4.4E-14 79.3 21.9 302 71-378 96-466 (472)
298 COG0076 GadB Glutamate decarbo 99.3 4.4E-09 1.1E-13 76.8 23.8 284 45-343 75-406 (460)
299 PRK04311 selenocysteine syntha 99.3 1.5E-08 3.8E-13 73.5 25.7 325 22-378 80-465 (465)
300 PRK05367 glycine dehydrogenase 99.3 1.1E-10 2.9E-15 86.7 14.5 295 70-380 537-877 (955)
301 cd00613 GDC-P Glycine cleavage 99.3 8.8E-11 2.3E-15 87.3 13.9 279 69-372 58-398 (398)
302 TIGR01264 tyr_amTase_E tyrosin 99.3 1.3E-09 3.3E-14 80.0 19.5 320 27-374 30-409 (415)
303 PRK12566 glycine dehydrogenase 99.3 4.6E-10 1.2E-14 82.9 16.1 294 70-380 538-878 (954)
304 TIGR02326 transamin_PhnW 2-ami 99.3 6.8E-09 1.7E-13 75.6 20.5 302 42-378 12-365 (366)
305 KOG2862 consensus 99.2 1.3E-08 3.3E-13 73.9 20.9 286 75-378 50-382 (385)
306 KOG0259 consensus 99.2 3E-08 7.8E-13 71.5 22.6 314 29-375 61-430 (447)
307 KOG0256 consensus 99.2 1.3E-08 3.2E-13 73.9 19.9 284 79-378 125-461 (471)
308 COG1921 SelA Selenocysteine sy 99.2 8.6E-10 2.2E-14 81.2 13.5 230 40-282 34-272 (395)
309 pfam00282 Pyridoxal_deC Pyrido 99.2 4.7E-09 1.2E-13 76.6 17.0 221 9-246 19-278 (370)
310 COG1003 GcvP Glycine cleavage 99.2 1.7E-08 4.3E-13 73.1 19.4 292 70-380 104-449 (496)
311 KOG0633 consensus 99.2 1.9E-09 4.7E-14 79.1 14.3 266 93-376 88-375 (375)
312 KOG2467 consensus 99.2 1.2E-08 3.2E-13 74.0 18.5 319 35-377 47-425 (477)
313 pfam03841 SelA L-seryl-tRNA se 99.1 6.4E-09 1.6E-13 75.7 15.4 220 45-281 19-261 (367)
314 TIGR02080 O_succ_thio_ly O-suc 99.1 1.8E-08 4.6E-13 72.9 17.6 281 71-376 48-380 (383)
315 PRK09257 aromatic amino acid a 99.1 2.8E-08 7.1E-13 71.8 18.6 249 93-377 97-397 (397)
316 TIGR01976 am_tr_V_VC1184 cyste 99.1 1.1E-07 2.8E-12 68.1 20.8 323 27-372 18-410 (410)
317 pfam06838 Alum_res Aluminium r 99.1 5E-09 1.3E-13 76.4 13.9 265 44-334 26-335 (405)
318 TIGR01329 cysta_beta_ly_E cyst 99.0 3.5E-07 8.8E-12 64.9 21.1 330 29-379 3-413 (415)
319 COG3844 Kynureninase [Amino ac 99.0 6.8E-07 1.7E-11 63.1 21.4 324 26-379 27-403 (407)
320 COG3033 TnaA Tryptophanase [Am 99.0 1.7E-06 4.4E-11 60.6 22.8 354 6-380 22-446 (471)
321 TIGR00461 gcvP glycine dehydro 99.0 3.9E-09 9.8E-14 77.1 8.5 287 69-381 545-894 (965)
322 COG3977 Alanine-alpha-ketoisov 98.9 3.8E-06 9.8E-11 58.4 20.5 191 182-378 201-411 (417)
323 KOG2040 consensus 98.8 8.8E-07 2.2E-11 62.4 17.2 289 71-380 578-920 (1001)
324 COG4100 Cystathionine beta-lya 98.8 4.4E-07 1.1E-11 64.3 13.4 238 71-333 60-344 (416)
325 TIGR02617 tnaA_trp_ase tryptop 98.8 1.9E-06 4.9E-11 60.3 16.3 344 10-378 21-442 (468)
326 COG1448 TyrB Aspartate/tyrosin 98.7 2.7E-06 6.8E-11 59.4 17.0 245 96-376 100-396 (396)
327 pfam05889 SLA_LP_auto_ag Solub 98.7 7E-07 1.8E-11 63.0 13.8 271 90-377 74-389 (389)
328 pfam02347 GDC-P Glycine cleava 98.7 1.5E-06 3.8E-11 61.0 15.2 305 38-372 68-429 (429)
329 COG0403 GcvP Glycine cleavage 98.7 2E-05 5.2E-10 53.9 20.6 319 28-376 73-448 (450)
330 PRK09275 aspartate aminotransf 98.7 4.8E-06 1.2E-10 57.8 16.5 323 38-379 112-522 (531)
331 TIGR00508 bioA adenosylmethion 98.7 1.1E-05 2.9E-10 55.5 17.8 339 17-378 33-465 (466)
332 KOG0629 consensus 98.6 5.9E-06 1.5E-10 57.3 15.1 278 91-378 160-509 (510)
333 TIGR01324 cysta_beta_ly_B cyst 98.5 6.9E-06 1.8E-10 56.9 13.8 277 75-374 55-384 (389)
334 KOG1383 consensus 98.5 0.00012 3E-09 49.2 19.5 317 44-381 92-449 (491)
335 TIGR00474 selA L-seryl-tRNA se 98.4 9E-07 2.3E-11 62.4 7.3 230 37-280 71-322 (448)
336 PRK12566 glycine dehydrogenase 98.4 0.00017 4.4E-09 48.1 18.5 301 38-374 82-440 (954)
337 TIGR03531 selenium_SpcS O-phos 98.4 5.2E-05 1.3E-09 51.4 15.6 326 30-376 46-444 (444)
338 PRK05367 glycine dehydrogenase 98.4 7.4E-05 1.9E-09 50.4 16.4 305 38-375 83-443 (955)
339 KOG0258 consensus 98.3 8.9E-05 2.3E-09 49.9 15.7 332 35-379 74-474 (475)
340 cd00611 PSAT_like Phosphoserin 98.2 0.00048 1.2E-08 45.4 19.7 307 41-375 6-353 (355)
341 TIGR02379 ECA_wecE TDP-4-keto- 98.2 0.00053 1.4E-08 45.1 20.0 294 70-376 26-375 (376)
342 TIGR01437 selA_rel pyridoxal p 98.2 0.0003 7.6E-09 46.7 15.6 324 27-378 7-389 (391)
343 KOG3846 consensus 98.1 0.0011 2.8E-08 43.1 19.7 333 26-381 63-464 (465)
344 TIGR01814 kynureninase kynuren 98.0 0.00075 1.9E-08 44.1 15.2 322 27-377 35-444 (444)
345 PRK12462 phosphoserine aminotr 98.0 0.0016 4.1E-08 42.1 19.4 317 29-377 3-361 (364)
346 TIGR02006 IscS cysteine desulf 97.9 0.0021 5.3E-08 41.4 19.9 323 45-379 16-380 (404)
347 KOG0628 consensus 97.8 0.0029 7.3E-08 40.5 20.4 291 74-379 108-472 (511)
348 PRK05355 phosphoserine aminotr 97.7 0.0051 1.3E-07 39.0 21.3 317 30-378 3-358 (360)
349 PRK03080 phosphoserine aminotr 97.5 0.009 2.3E-07 37.4 18.5 283 74-380 47-378 (381)
350 COG1932 SerC Phosphoserine ami 97.3 0.017 4.3E-07 35.7 19.7 318 29-378 4-363 (365)
351 TIGR00614 recQ_fam ATP-depende 96.5 0.079 2E-06 31.5 11.1 255 79-363 16-322 (497)
352 KOG1412 consensus 95.2 0.27 7E-06 28.2 17.9 299 37-381 68-408 (410)
353 PRK11057 ATP-dependent DNA hel 94.8 0.35 8.9E-06 27.5 14.1 61 49-119 10-71 (607)
354 TIGR02618 tyr_phenol_ly tyrosi 94.3 0.44 1.1E-05 26.9 16.8 351 7-380 15-428 (450)
355 pfam04864 Alliinase_C Allinase 94.0 0.53 1.3E-05 26.4 10.3 169 190-375 159-362 (363)
356 TIGR02639 ClpA ATP-dependent C 92.3 0.11 2.9E-06 30.6 2.7 48 172-220 268-330 (774)
357 TIGR01788 Glu-decarb-GAD gluta 92.3 0.71 1.8E-05 25.6 6.8 330 26-380 45-493 (493)
358 KOG1411 consensus 92.0 1 2.6E-05 24.6 11.1 243 82-377 138-424 (427)
359 PRK09361 radB DNA repair and r 88.7 2 5.1E-05 22.8 7.0 66 137-202 81-161 (224)
360 KOG3843 consensus 87.9 2.2 5.6E-05 22.5 9.3 279 83-377 68-401 (432)
361 TIGR01389 recQ ATP-dependent D 87.3 2.4 6.2E-05 22.3 11.2 120 81-212 19-147 (607)
362 TIGR02236 recomb_radA DNA repa 84.9 3.2 8.1E-05 21.5 5.9 51 148-199 201-266 (333)
363 PRK04301 radA DNA repair and r 84.4 3.3 8.5E-05 21.4 5.8 86 113-198 137-249 (318)
364 pfam08423 Rad51 Rad51. Rad51 i 83.8 3.5 9E-05 21.3 5.9 62 137-198 111-188 (261)
365 cd01393 recA_like RecA is a b 83.7 3.6 9.1E-05 21.2 7.1 63 136-198 86-164 (226)
366 PRK11633 hypothetical protein; 83.3 3.7 9.5E-05 21.1 6.9 58 317-376 149-206 (218)
367 TIGR02198 rfaE_dom_I rfaE bifu 82.9 2.9 7.4E-05 21.8 4.9 52 145-199 128-181 (321)
368 PTZ00035 Rad51; Provisional 81.0 4.5 0.00011 20.6 5.3 11 183-193 179-189 (350)
369 TIGR00693 thiE thiamine-phosph 77.7 1.5 3.7E-05 23.7 1.9 20 182-201 55-74 (210)
370 cd01394 radB RadB. The archaea 75.9 6.4 0.00016 19.6 5.2 65 137-201 77-157 (218)
371 TIGR00630 uvra excinuclease AB 74.8 6.9 0.00018 19.5 7.4 51 318-381 863-915 (956)
372 PRK07418 acetolactate synthase 73.4 5.9 0.00015 19.9 4.1 79 144-229 209-299 (615)
373 pfam04309 G3P_antiterm Glycero 73.2 7.5 0.00019 19.2 4.8 49 144-204 6-56 (174)
374 TIGR02478 6PF1K_euk 6-phosphof 73.2 5.4 0.00014 20.1 3.9 78 97-196 196-279 (777)
375 PRK13845 putative glycerol-3-p 71.9 5.5 0.00014 20.0 3.7 30 162-194 92-124 (437)
376 TIGR02483 PFK_mixed phosphofru 70.1 7.1 0.00018 19.4 3.9 100 34-180 144-246 (339)
377 PRK05409 hypothetical protein; 67.4 10 0.00026 18.4 6.1 145 29-202 29-178 (283)
378 COG0468 RecA RecA/RadA recombi 66.8 10 0.00026 18.4 7.4 112 84-200 62-193 (279)
379 TIGR00694 thiM hydroxyethylthi 66.7 3 7.7E-05 21.7 1.4 119 65-200 31-161 (282)
380 COG1105 FruK Fructose-1-phosph 66.1 11 0.00027 18.3 5.0 52 144-202 111-168 (310)
381 PRK02615 thiamine-phosphate py 64.3 5 0.00013 20.3 2.2 19 183-201 189-207 (345)
382 CHL00099 ilvB acetohydroxyacid 62.1 13 0.00032 17.8 4.4 80 143-229 198-289 (588)
383 pfam10087 DUF2325 Uncharacteri 62.0 13 0.00032 17.8 6.6 85 70-156 5-94 (96)
384 pfam04015 DUF362 Domain of unk 61.4 12 0.00029 18.1 3.6 35 26-61 33-72 (262)
385 PRK05428 HPr kinase/phosphoryl 61.2 13 0.00033 17.7 4.1 45 145-198 67-111 (308)
386 TIGR02881 spore_V_K stage V sp 61.1 2.2 5.6E-05 22.5 -0.1 27 177-205 91-118 (261)
387 cd01173 pyridoxal_pyridoxamine 59.2 14 0.00036 17.5 5.1 102 96-214 9-119 (254)
388 TIGR01959 nuoF_fam NADH-quinon 58.8 2.5 6.3E-05 22.2 -0.2 42 198-252 141-185 (420)
389 TIGR02482 PFKA_ATP 6-phosphofr 58.2 11 0.00028 18.2 3.0 39 133-171 182-222 (302)
390 cd07373 2A5CPDO_A The alpha su 58.1 15 0.00038 17.4 8.6 31 75-106 29-59 (271)
391 pfam02110 HK Hydroxyethylthiaz 57.6 15 0.00038 17.3 4.7 119 65-201 31-160 (246)
392 PRK13508 tagatose-6-phosphate 56.9 16 0.0004 17.3 4.8 48 147-201 111-164 (309)
393 PRK10689 transcription-repair 56.9 16 0.0004 17.2 5.7 18 356-373 683-700 (1148)
394 cd04913 ACT_AKii-LysC-BS-like_ 56.7 16 0.0004 17.2 6.9 57 320-380 13-69 (75)
395 PRK06546 pyruvate dehydrogenas 56.2 16 0.00041 17.2 4.0 77 144-229 186-274 (578)
396 cd07370 HPCD The Class III ext 55.7 16 0.00041 17.1 8.7 28 75-104 32-60 (280)
397 PRK09355 hydroxyethylthiazole 55.6 16 0.00041 17.1 4.7 152 9-200 2-164 (262)
398 PRK08611 pyruvate oxidase; Pro 55.5 16 0.00042 17.1 3.7 77 144-229 188-276 (576)
399 TIGR02403 trehalose_treC alpha 55.0 14 0.00037 17.4 3.2 64 44-108 170-263 (555)
400 TIGR00580 mfd transcription-re 54.9 14 0.00037 17.4 3.2 100 139-247 724-862 (997)
401 PRK10933 trehalose-6-phosphate 54.7 17 0.00043 17.0 3.5 24 44-68 174-198 (551)
402 TIGR02315 ABC_phnC phosphonate 54.4 17 0.00043 17.0 4.2 19 319-337 187-209 (253)
403 TIGR02017 hutG_amidohyd N-form 54.2 17 0.00044 17.0 5.2 22 183-205 129-150 (269)
404 KOG2848 consensus 53.7 16 0.00041 17.1 3.3 58 306-377 192-252 (276)
405 cd01121 Sms Sms (bacterial rad 53.3 18 0.00045 16.9 6.0 116 61-211 78-213 (372)
406 KOG1123 consensus 53.1 6.8 0.00017 19.5 1.3 110 80-204 307-434 (776)
407 TIGR00603 rad25 DNA repair hel 52.9 18 0.00046 16.8 4.5 103 80-204 274-402 (756)
408 cd00363 PFK Phosphofructokinas 52.5 18 0.00047 16.8 3.8 14 92-105 94-107 (338)
409 TIGR00057 TIGR00057 Sua5/YciO/ 51.7 18 0.00047 16.8 3.3 56 148-207 12-74 (215)
410 PRK03512 thiamine-phosphate py 51.5 12 0.00031 17.9 2.4 20 182-201 52-71 (211)
411 pfam00274 Glycolytic Fructose- 50.9 16 0.00042 17.1 3.0 61 145-205 112-185 (348)
412 PRK09248 putative hydrolase; V 50.3 15 0.00038 17.4 2.7 21 181-201 141-161 (246)
413 TIGR00708 cobA cob(I)alamin ad 50.3 20 0.0005 16.6 3.6 54 112-190 113-166 (191)
414 PRK13398 3-deoxy-7-phosphohept 50.3 20 0.0005 16.6 5.4 61 144-205 145-208 (266)
415 pfam00365 PFK Phosphofructokin 50.0 20 0.00051 16.6 4.8 23 165-194 95-117 (279)
416 PRK06466 acetolactate synthase 49.8 20 0.00051 16.5 3.7 78 145-229 192-281 (574)
417 PRK09107 acetolactate synthase 49.7 20 0.00052 16.5 3.6 80 145-229 197-288 (594)
418 KOG0742 consensus 49.5 12 0.0003 18.0 2.1 30 176-205 417-456 (630)
419 CHL00174 accD acetyl-CoA carbo 49.1 21 0.00053 16.5 5.8 10 327-336 274-283 (305)
420 TIGR00928 purB adenylosuccinat 47.6 14 0.00035 17.5 2.2 23 69-91 214-236 (469)
421 PRK04031 DNA primase; Provisio 47.0 15 0.00039 17.3 2.3 70 166-256 191-264 (420)
422 pfam06733 DEAD_2 DEAD_2. This 47.0 9.4 0.00024 18.6 1.2 13 192-204 139-151 (168)
423 PRK11664 ATP-dependent RNA hel 46.8 12 0.00031 17.9 1.8 13 358-370 555-567 (812)
424 PRK11145 pflA pyruvate formate 46.7 23 0.00057 16.2 5.0 15 360-374 225-239 (246)
425 PRK13544 consensus 46.6 23 0.00058 16.2 3.7 28 187-214 6-40 (208)
426 TIGR02714 amido_AtzD_TrzD ring 46.0 14 0.00037 17.4 2.1 30 220-252 236-266 (368)
427 cd07362 HPCD_like Class III ex 46.0 23 0.00059 16.2 8.7 29 74-103 29-57 (272)
428 COG0178 UvrA Excinuclease ATPa 45.9 23 0.00059 16.2 8.4 90 272-381 786-877 (935)
429 PRK06512 thiamine-phosphate py 45.4 15 0.00039 17.3 2.1 20 182-201 60-79 (221)
430 TIGR00631 uvrb excinuclease AB 45.3 9.8 0.00025 18.5 1.1 16 361-376 429-444 (667)
431 PRK07979 acetolactate synthase 45.0 24 0.00061 16.1 3.9 78 145-229 192-281 (574)
432 PRK07525 sulfoacetaldehyde ace 44.4 24 0.00062 16.0 3.9 78 145-229 186-275 (589)
433 COG3473 Maleate cis-trans isom 44.3 9.4 0.00024 18.6 0.9 31 31-70 10-40 (238)
434 PRK00349 uvrA excinuclease ABC 43.9 25 0.00063 16.0 7.6 49 318-381 833-885 (944)
435 PRK06456 acetolactate synthase 43.8 25 0.00063 16.0 4.2 78 145-229 193-282 (572)
436 KOG0662 consensus 43.3 12 0.00031 18.0 1.3 18 230-249 147-164 (292)
437 cd02511 Beta4Glucosyltransfera 43.0 26 0.00065 15.9 4.5 22 79-100 14-36 (229)
438 COG0352 ThiE Thiamine monophos 42.7 18 0.00047 16.8 2.2 21 181-201 53-73 (211)
439 TIGR03133 malonate_beta malona 42.7 22 0.00056 16.3 2.6 41 219-264 135-176 (274)
440 TIGR01967 DEAH_box_HrpA ATP-de 42.3 15 0.00039 17.3 1.7 152 161-334 157-322 (1320)
441 cd00740 MeTr MeTr subgroup of 41.5 27 0.00069 15.7 4.8 51 142-200 76-129 (252)
442 cd00948 FBP_aldolase_I_a Fruct 41.0 21 0.00054 16.4 2.3 60 145-204 114-186 (330)
443 TIGR01858 tag_bisphos_ald clas 40.8 28 0.00071 15.7 3.1 56 142-211 81-137 (282)
444 PRK00339 minC septum formation 40.7 28 0.00071 15.7 5.5 16 181-196 70-85 (249)
445 TIGR00250 TIGR00250 conserved 40.5 28 0.00071 15.6 3.9 51 144-201 36-95 (133)
446 COG2256 MGS1 ATPase related to 39.9 20 0.00052 16.5 2.0 73 129-202 148-232 (436)
447 TIGR00604 rad3 DNA repair heli 39.8 15 0.00038 17.4 1.3 17 187-203 272-289 (813)
448 cd01123 Rad51_DMC1_radA Rad51_ 39.7 29 0.00073 15.6 6.1 62 137-198 87-165 (235)
449 PRK09505 malS periplasmic alph 39.7 29 0.00073 15.6 5.2 64 137-201 220-313 (683)
450 pfam06877 DUF1260 Protein of u 39.6 29 0.00074 15.6 11.5 87 293-380 6-95 (103)
451 KOG0922 consensus 39.1 17 0.00044 17.0 1.6 25 98-122 148-172 (674)
452 smart00642 Aamy Alpha-amylase 38.7 30 0.00076 15.5 2.8 26 176-201 66-91 (166)
453 TIGR01366 serC_3 phosphoserine 38.3 30 0.00077 15.4 5.7 61 314-378 300-361 (362)
454 cd03809 GT1_mtfB_like This fam 38.3 30 0.00077 15.4 3.6 30 265-294 319-348 (365)
455 COG0610 Type I site-specific r 38.1 25 0.00064 15.9 2.3 59 142-211 335-394 (962)
456 TIGR02493 PFLA pyruvate format 38.0 31 0.00078 15.4 7.9 123 238-374 43-192 (243)
457 PRK06965 acetolactate synthase 37.9 31 0.00078 15.4 4.2 79 144-229 206-296 (587)
458 PRK00725 glgC glucose-1-phosph 37.4 31 0.0008 15.3 5.1 102 143-252 115-228 (431)
459 PRK13342 recombination factor 37.3 31 0.0008 15.3 3.0 78 112-189 117-202 (417)
460 smart00488 DEXDc2 DEAD-like he 37.3 16 0.0004 17.2 1.1 22 357-378 257-278 (289)
461 smart00489 DEXDc3 DEAD-like he 37.3 16 0.0004 17.2 1.1 22 357-378 257-278 (289)
462 TIGR00789 flhB_rel FlhB domain 37.0 23 0.00058 16.2 1.9 31 165-201 18-48 (84)
463 PRK00030 minC septum formation 36.4 32 0.00083 15.3 5.0 57 138-197 19-78 (292)
464 PRK04516 minC septum formation 36.2 33 0.00083 15.2 4.4 13 182-194 64-76 (235)
465 PHA00666 putative protease 36.2 26 0.00067 15.8 2.1 10 326-335 204-213 (233)
466 pfam02603 Hpr_kinase_N HPr Ser 35.9 33 0.00084 15.2 3.2 50 143-201 64-113 (127)
467 pfam01301 Glyco_hydro_35 Glyco 35.9 33 0.00085 15.2 4.8 49 147-195 124-173 (317)
468 PRK07535 methyltetrahydrofolat 35.8 33 0.00085 15.2 4.5 48 143-200 76-126 (268)
469 PRK07414 cob(I)yrinic acid a,c 35.8 33 0.00085 15.2 3.3 14 112-125 114-127 (178)
470 PTZ00293 thymidine kinase; Pro 35.8 33 0.00085 15.2 4.6 12 328-339 247-258 (284)
471 TIGR02402 trehalose_TreZ malto 35.7 33 0.00085 15.2 3.2 49 9-62 123-184 (564)
472 PRK12485 bifunctional 3,4-dihy 35.6 25 0.00064 16.0 1.9 34 166-200 160-194 (369)
473 COG1134 TagH ABC-type polysacc 35.5 34 0.00085 15.2 4.1 19 194-214 48-66 (249)
474 COG1197 Mfd Transcription-repa 35.5 34 0.00086 15.2 5.2 69 138-213 805-900 (1139)
475 CHL00181 cbbX CbbX; Provisiona 35.0 32 0.00081 15.3 2.4 27 177-205 108-135 (287)
476 cd06068 H2MP_like-1 Putative [ 34.7 35 0.00088 15.1 3.2 95 175-281 35-142 (144)
477 cd04736 MDH_FMN Mandelate dehy 34.6 30 0.00075 15.5 2.2 26 255-282 318-343 (361)
478 pfam05114 DUF692 Protein of un 34.5 35 0.00089 15.1 6.2 142 29-202 26-174 (275)
479 KOG1299 consensus 34.3 24 0.00061 16.1 1.6 23 73-95 181-203 (549)
480 COG2433 Uncharacterized conser 34.2 20 0.00051 16.6 1.3 23 178-200 296-319 (652)
481 PRK00635 excinuclease ABC subu 33.8 36 0.00091 15.0 7.8 23 359-381 1732-1754(1809)
482 pfam07429 Fuc4NAc_transf 4-alp 32.8 34 0.00086 15.2 2.2 11 6-16 20-30 (361)
483 cd07371 2A5CPDO_AB The alpha a 32.6 37 0.00096 14.9 7.7 29 75-105 26-55 (268)
484 TIGR02735 purC_vibrio phosphor 32.4 23 0.0006 16.1 1.4 90 53-158 126-223 (365)
485 TIGR02717 AcCoA-syn-alpha acet 32.1 31 0.00078 15.4 1.9 37 245-283 331-374 (457)
486 TIGR02874 spore_ytfJ sporulati 32.1 38 0.00097 14.8 2.6 44 333-379 81-124 (132)
487 TIGR03528 2_3_DAP_am_ly diamin 31.9 38 0.00098 14.8 6.0 73 119-201 119-192 (396)
488 pfam00837 T4_deiodinase Iodoth 31.8 39 0.00098 14.8 3.9 41 163-203 102-147 (237)
489 PRK09311 bifunctional 3,4-dihy 31.6 30 0.00078 15.4 1.8 30 166-196 161-190 (400)
490 PRK09529 bifunctional acetyl-C 31.5 39 0.001 14.8 3.7 21 181-201 282-303 (713)
491 PRK11823 DNA repair protein Ra 31.1 40 0.001 14.7 5.4 107 61-198 86-212 (454)
492 cd01917 ACS_2 Acetyl-CoA synth 30.5 41 0.001 14.7 3.4 31 70-100 3-37 (287)
493 cd01170 THZ_kinase 4-methyl-5- 30.3 41 0.001 14.6 5.1 119 65-201 31-161 (242)
494 COG1066 Sms Predicted ATP-depe 30.0 41 0.0011 14.6 10.3 114 54-198 80-215 (456)
495 PRK09314 bifunctional 3,4-dihy 29.9 40 0.001 14.7 2.2 34 166-200 159-193 (339)
496 PRK11630 hypothetical protein; 29.7 42 0.0011 14.6 3.2 35 167-201 32-72 (206)
497 PRK09270 frcK putative fructos 29.4 42 0.0011 14.5 6.2 122 71-199 45-170 (230)
498 COG3845 ABC-type uncharacteriz 29.1 43 0.0011 14.5 3.0 26 356-381 167-192 (501)
499 PRK07282 acetolactate synthase 29.1 43 0.0011 14.5 4.6 77 145-229 196-285 (566)
500 PRK13397 3-deoxy-7-phosphohept 28.8 43 0.0011 14.5 5.3 62 143-205 132-196 (250)
No 1
>TIGR00858 bioF 8-amino-7-oxononanoate synthase; InterPro: IPR004723 8-amino-7-oxononanoate synthase (2.3.1.47 from EC) is involved in biotin biosynthesis. Synonym(s): AONS, 8-amino-7-ketopelargonate synthase, 7-keto-8-amino-pelargonic acid synthetase, 7-KAP synthetase; GO: 0008710 8-amino-7-oxononanoate synthase activity, 0009102 biotin biosynthetic process.
Probab=100.00 E-value=0 Score=866.09 Aligned_cols=356 Identities=37% Similarity=0.563 Sum_probs=334.7
Q ss_pred HHHHHCCCEEEECCC--CEEEECCCCCCCCCCCCHHHHHH-HHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 999975983999289--76898034465667798899999-999998637868872244368858999999998401288
Q gi|254780486|r 14 QKIKSKGRHRQLLRR--QDIWDFTSHDYLALSSSTLLREK-ILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF 90 (381)
Q Consensus 14 ~~~~~~g~~~~~~~~--~~~l~f~s~dYLGl~~~p~v~~a-~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~ 90 (381)
..+.+...-....|| +++|||||||||||++||+|+++ +++++ ++||+|++||||++|++++|++||++||+|.|+
T Consensus 6 ~~~~~~~~~~~~~dgPP~~~l~FsSNDYLGLa~hp~l~~af~~~~~-~~~G~Gs~aSrLv~G~~~~H~~LE~~lA~~kg~ 84 (378)
T TIGR00858 6 RPLSRAPGPEVVRDGPPRRLLNFSSNDYLGLASHPELIQAFAQQAA-EQYGAGSTASRLVTGNSPLHEELEEELAEFKGT 84 (378)
T ss_pred CCCCCCCCCEEEECCCCHHHHHCCCCCCHHHCCCHHHHHHHHHHHH-HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
T ss_conf 5434688667887688714653136440100379889999999999-866877367434037856899999999986288
Q ss_pred CCEEEECCCCHHHHHHHHHHCC-----CCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCC
Q ss_conf 8516741660245655666316-----89710045420267752666408764030568814789976431000247860
Q gi|254780486|r 91 EKMLYFGSGYAANMAILSTLPQ-----ATDLIVYDKLVHASIREGINSGKAQAIAIPHNNINSFAENINKWRKSGGKGFP 165 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~l~~-----~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~ 165 (381)
|+||+|+|||+||+|+|++|++ ++|+|++|++|||||+||++||+|++++|+|||+++||++|++.+.++ .+.
T Consensus 85 EaALlFsSGY~AN~Gvi~aL~~~~~l~~~DlilsD~LNHASl~dG~rLS~A~~~~y~H~D~~~L~~lL~~~~g~~--~~~ 162 (378)
T TIGR00858 85 EAALLFSSGYLANVGVISALVGKRVLEKGDLILSDALNHASLIDGCRLSGARVLRYRHNDVEHLERLLEKNRGKE--RRK 162 (378)
T ss_pred CCEEEEHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHCCCCC--CCE
T ss_conf 203420027899999999875157656786044202547778986415986278706899899999997401513--776
Q ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCC--CCCCCCCCCCCCCCEEEEEEC
Q ss_conf 797146215766134689999986313608986131122234777640110000134--652100134656530267524
Q gi|254780486|r 166 WIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERN--NVIVMHSCSKALGSSGALVGS 243 (381)
Q Consensus 166 ~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~--~~iv~~TlsKa~g~~GG~i~~ 243 (381)
+||||||||||||+|||++|.+||++|+++||||||||+||+|++|+|+++++|+.+ ++|+|||||||||+.||||+|
T Consensus 163 livTDGVFSMDGD~APL~~L~~la~~~~A~L~VDDAHgtGVlG~~G~G~~~~fgl~~~~~~i~~GTlSKAlGs~Ga~V~g 242 (378)
T TIGR00858 163 LIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPAPVDIQVGTLSKALGSYGAYVAG 242 (378)
T ss_pred EEEECCEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEECCHHHHHCHHHHHH
T ss_conf 88970013168884897899999987098899986545366288754149765988887269986131665405256354
Q ss_pred CCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHHHHHCCCC---C---CCCCCEEEEE
Q ss_conf 5100100001211000013577502578988789886-2710224789999999987641797---8---9989728999
Q gi|254780486|r 244 NKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIK-RKPALHKSLLQLINITDKIANKKIG---F---SSQSHIQSIV 316 (381)
Q Consensus 244 ~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~-~~~~~~~~l~~~~~~~~~~~~~~~g---~---~~~s~I~~v~ 316 (381)
++.++|||.|++|||||||+|||..++|+.++|++|+ ++|++|++|.++++++.+ ..+.++ | +++|||+||+
T Consensus 243 ~~~l~~yL~n~AR~~If~TaLPPa~~aA~~aAl~~i~~~~~~rr~~L~~~~~~~~~-~l~~~~~~~f~~~~~~TPI~P~~ 321 (378)
T TIGR00858 243 SEALIDYLINRARTFIFSTALPPAVVAAALAALELIQEEEPWRREKLLALIARLRK-GLEALGKLVFQLMPSETPIVPVI 321 (378)
T ss_pred HHHHHHHHHHCCCCCEECCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH-HHHHCCCCCCEECCCCCCCEEEE
T ss_conf 58999999841576423236658899999999997222486478999999999999-98754766310167898625887
Q ss_pred ECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 589799999999999779189862288888887039996287899999999999999
Q gi|254780486|r 317 IGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILP 373 (381)
Q Consensus 317 ~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~ 373 (381)
+||++.++.++++|+++||+|.+|||||||+|++|||||++|.||++|||+++++|+
T Consensus 322 ~G~~~~al~~a~~L~~~G~~v~AIRPPTVP~G~sRLR~Tl~A~Ht~~di~~L~~~l~ 378 (378)
T TIGR00858 322 IGDEESALALAEELQEQGIFVGAIRPPTVPKGTSRLRLTLSAAHTEGDIDRLLEALK 378 (378)
T ss_pred ECCCHHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEEEEEECCCHHHHHHHHHHCC
T ss_conf 089289999999998779479102588887796104557740489889999999739
No 2
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative; InterPro: IPR010962 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). PLP is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination , , . PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors . Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy . PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalyzed reactions, enzymatic and non-enzymatic . This entry contains a number of enzyme families: Serine palmitoyltransferase Glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase) 5-aminolevulinic acid synthase 8-amino-7-oxononanoate synthase All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.; GO: 0016740 transferase activity, 0030170 pyridoxal phosphate binding.
Probab=100.00 E-value=0 Score=809.23 Aligned_cols=370 Identities=30% Similarity=0.491 Sum_probs=354.5
Q ss_pred HHHHHHHHHHCCCE------------EEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
Q ss_conf 99999999975983------------999289768980344656677988999999999986378688722443688589
Q gi|254780486|r 9 YEERLQKIKSKGRH------------RQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQ 76 (381)
Q Consensus 9 ~~~~l~~~~~~g~~------------~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~ 76 (381)
++++|+.+|.+|.| ++.++||++||+||||||||+.||.+++++.++++ +||+|+|+.|.+.||.++
T Consensus 1 L~~~L~~Lke~Gly~~i~~L~s~qGp~v~vnG~~vinLsSNNYLGlA~hp~Lk~aA~~a~~-~yGvGAGAVRTIaGTl~l 79 (392)
T TIGR01825 1 LKEELNELKENGLYVEIRVLESAQGPEVKVNGKKVINLSSNNYLGLASHPRLKEAAKEAIQ-QYGVGAGAVRTIAGTLEL 79 (392)
T ss_pred CHHHHHHHHHCCCCCCCHHHCCCCCCEEEECCEEEEECCCCCCCCCCCCHHHHHHHHHHHH-HCCCCCCCHHHHHHHHHH
T ss_conf 9446878856486144053207888878988857874043554554688768999999998-659622412104337789
Q ss_pred HHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCC--CCCHHHHCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHH
Q ss_conf 999999984012888516741660245655666316897--100454202677526664087640305688147899764
Q gi|254780486|r 77 HLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATD--LIVYDKLVHASIREGINSGKAQAIAIPHNNINSFAENIN 154 (381)
Q Consensus 77 ~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d--~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD~~~Le~~l~ 154 (381)
|+|||++||+|.++|+|++|.|||.||+++|.+|.+++| +|++||+|||||+||+||++|++++|+|-||+||+++|+
T Consensus 80 H~eLE~~LA~FK~teAAl~fqSGF~~N~GvlSa~L~k~ddG~v~SdELNHASIIDG~RLtkA~k~~y~H~dm~DL~~~l~ 159 (392)
T TIGR01825 80 HEELEEKLAKFKKTEAALVFQSGFNTNQGVLSALLRKGDDGIVLSDELNHASIIDGLRLTKAKKKIYKHVDMDDLERVLR 159 (392)
T ss_pred HHHHHHHHHHHCCCCEEEHHHCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHCCCCCCCCEEEEECCCHHHHHHHHH
T ss_conf 99999998755382011010312237799998762358871587200020345504223788568984598458999997
Q ss_pred HHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCC-CCC-CCCCCCCC
Q ss_conf 3100024786079714621576613468999998631360898613112223477764011000013-465-21001346
Q gi|254780486|r 155 KWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEER-NNV-IVMHSCSK 232 (381)
Q Consensus 155 ~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~-~~~-iv~~TlsK 232 (381)
+.....+-+..+||||||||||||+||||+|+||+++||++.+||||||-||+|+.|||+++|||.. +++ |-+|||||
T Consensus 160 e~~~~Gqy~~~l~vTDGVFSMDGdvApLp~iVE~Ae~Yda~~yVDDAHGsGVlGe~GrGtV~HFGL~y~~v~~qvGTLSK 239 (392)
T TIGR01825 160 ENVEEGQYKKKLIVTDGVFSMDGDVAPLPEIVELAEKYDALVYVDDAHGSGVLGEKGRGTVKHFGLEYDKVDIQVGTLSK 239 (392)
T ss_pred HCCCCCCCCCEEEEECCEEECCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEECCCCCCCCEEEEECCHHH
T ss_conf 16033754436899665042567878873233463245957998633466444778871353037541646788555223
Q ss_pred CCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC---CC
Q ss_conf 565302675245100100001211000013577502578988789886271022478999999998764179789---98
Q gi|254780486|r 233 ALGSSGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIANKKIGFS---SQ 309 (381)
Q Consensus 233 a~g~~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~~g~~---~~ 309 (381)
|+|..|||++|++++||||++++|||.|||++||+.++|+.+|++.+.++|++.++||+|.+|++. .+.++||+ +.
T Consensus 240 A~GvvGGY~AG~~~lidyL~~~aRPFLFSta~~Pa~~~A~~~Av~~l~~~~~l~~kLW~Nt~ylk~-~L~~LGydl~~S~ 318 (392)
T TIGR01825 240 AIGVVGGYVAGSKELIDYLKARARPFLFSTALPPAVVAALIEAVDVLQESPELMEKLWDNTRYLKA-GLSKLGYDLGESE 318 (392)
T ss_pred HHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH-HHHHHCCCCCCCC
T ss_conf 222566423488899999986289860125788078999999999870793147776788999998-7676164114766
Q ss_pred CCEEEEEECCHHHHHHHHHHHHHC-CEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 972899958979999999999977-91898622888888870399962878999999999999999988738
Q gi|254780486|r 310 SHIQSIVIGDNKSCLNIAKNLQKK-GFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 310 s~I~~v~~gd~~~a~~~~~~L~~~-Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
+||.||++||+..|.++.++|+++ |||+..|.|||||+|++|||..|||.||+||+|+++++++++.+|+.
T Consensus 319 tPItPv~~Gde~~A~efS~rL~~~yGvFa~sivFPTVp~g~ARiR~~~tA~HTkd~L~~al~aye~~Gk~l~ 390 (392)
T TIGR01825 319 TPITPVLIGDEKVAQEFSRRLLDEYGVFAQSIVFPTVPRGTARIRNIPTAEHTKDDLDQALDAYEKVGKELG 390 (392)
T ss_pred CCCCCEEECCCHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCCHHCCHHHHHHHHHHHHHHHHHHC
T ss_conf 861245876515689999987775290899842165669884212465613026679999999998678725
No 3
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase; InterPro: IPR010961 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway . The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin . The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) . This entry represents 5-aminoaevulinic acid (ALA) synthase (2.3.1.37 from EC), which catalyses the first stage of tetrapyrrole biosynthesis by the C4 pathway, namely the condensation of succinyl CoA and glycine. ALA synthase is a pyridoxal-phosphate-dependent enzyme. During catalysis, glycine initially binds to the enzyme cofactor, and after condensation with succinyl CoA, CoA, carbon dioxide and 5-aminolevulinic acid are produced .; GO: 0003870 5-aminolevulinate synthase activity, 0030170 pyridoxal phosphate binding, 0033014 tetrapyrrole biosynthetic process.
Probab=100.00 E-value=0 Score=806.21 Aligned_cols=374 Identities=31% Similarity=0.502 Sum_probs=349.2
Q ss_pred CCCCHHHHHHHHHHHHHHCCCEEEEC-----------------CC--CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 98865789999999999759839992-----------------89--768980344656677988999999999986378
Q gi|254780486|r 1 MKNIQMSFYEERLQKIKSKGRHRQLL-----------------RR--QDIWDFTSHDYLALSSSTLLREKILSSLDSKIP 61 (381)
Q Consensus 1 m~~~~~~~~~~~l~~~~~~g~~~~~~-----------------~~--~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g 61 (381)
|+++ .||+++|+++|++||||++. +| |++..|||||||||++||+|.+|..++++ ++|
T Consensus 1 mdY~--~~f~~~id~~~~egrYR~F~~l~R~ag~FP~A~~~~~~g~~~dVtVWCSNDYLGMgqHp~Vl~Am~~~~~-~~G 77 (427)
T TIGR01821 1 MDYD--QFFDKEIDKLHQEGRYRVFADLERLAGEFPFAQWHSPDGVKKDVTVWCSNDYLGMGQHPKVLQAMHEALD-KVG 77 (427)
T ss_pred CCHH--HHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCCEEECCCCCCEEEEEEECCCHHHCCCCHHHHHHHHHHHH-HCC
T ss_conf 9656--7899987654038985002243635178985134265778101788721213204886547988999999-638
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCC--CCCCCCHHHHCCHHHHHHHHHCCCCCE
Q ss_conf 688722443688589999999984012888516741660245655666316--897100454202677526664087640
Q gi|254780486|r 62 IGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQ--ATDLIVYDKLVHASIREGINSGKAQAI 139 (381)
Q Consensus 62 ~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~--~~d~ii~D~~~HaSi~~g~~ls~a~~~ 139 (381)
.|+||.|.++||+..|.+||+|||+++|+|.||+|+|||-||.+++.+|++ |+.+||+|++|||||++|+|-|++.++
T Consensus 78 aGaGGTRNIsGtn~~~v~LEaELAdLH~KE~ALvFtSgyVaNda~L~tL~k~~P~~~ifSD~LNHASMI~GIr~S~~~k~ 157 (427)
T TIGR01821 78 AGAGGTRNISGTNIYHVELEAELADLHGKESALVFTSGYVANDATLATLAKIIPGCVIFSDELNHASMIEGIRRSGAEKF 157 (427)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCCCCEE
T ss_conf 89987536566777899999999755173113567788999999999999870885898365563569999874789505
Q ss_pred EECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEH-
Q ss_conf 3056881478997643100024786079714621576613468999998631360898613112223477764011000-
Q gi|254780486|r 140 AIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHII- 218 (381)
Q Consensus 140 ~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~- 218 (381)
.|||||++|||++|+....+.|| +|+.|+|||||||+|||+|||+|++|||++.+|||+|++|.||++|.|+.|..
T Consensus 158 iFrHND~~hLe~LL~~~d~~~PK---iIAFESvYSMDGd~aPi~eiCDlA~kYGALTy~DEVHAVGlYGprGgGIaErdd 234 (427)
T TIGR01821 158 IFRHNDVAHLEKLLQSVDPNAPK---IIAFESVYSMDGDIAPIKEICDLADKYGALTYLDEVHAVGLYGPRGGGIAERDD 234 (427)
T ss_pred EEECCCHHHHHHHHHHCCCCCCC---EEEEEEHCCCCCCCCCHHHHHHHHHHHCCCCEECCEEEECCCCCCCCCCCHHHH
T ss_conf 63059978999998647799895---688610001678726678896688871886300114653365888885120221
Q ss_pred -------H--------------CCCCC-CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHH
Q ss_conf -------0--------------13465-2100134656530267524510010000121100001357750257898878
Q gi|254780486|r 219 -------E--------------ERNNV-IVMHSCSKALGSSGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEAL 276 (381)
Q Consensus 219 -------~--------------~~~~~-iv~~TlsKa~g~~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal 276 (381)
| +.+++ |+.|||+||||+.||||+++..++|++|.++++|||||+|||.++++|++|+
T Consensus 235 feshrasGiatPktndkGGakt~mhriDii~GTLaKAFG~~GGYIa~~~~L~D~~RS~ApGFIFTTsLPP~~~aGA~asI 314 (427)
T TIGR01821 235 FESHRASGIATPKTNDKGGAKTLMHRIDIIEGTLAKAFGVVGGYIAASRKLIDAVRSYAPGFIFTTSLPPAIAAGALASI 314 (427)
T ss_pred CCHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHCCCCCCEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 10000157677765766652001110000016511223444530205522132000037842124215589999999999
Q ss_pred HHHHHC--CCHHHHHHHHHHHHHH-HHHCCCCC-CCCCCEEEEEECCHHHHHHHHHHHHH-CCEEEEEECCCCCCCCCCE
Q ss_conf 988627--1022478999999998-76417978-99897289995897999999999997-7918986228888888703
Q gi|254780486|r 277 KLIKRK--PALHKSLLQLINITDK-IANKKIGF-SSQSHIQSIVIGDNKSCLNIAKNLQK-KGFDIRAIRPPTVPINTAR 351 (381)
Q Consensus 277 ~~l~~~--~~~~~~l~~~~~~~~~-~~~~~~g~-~~~s~I~~v~~gd~~~a~~~~~~L~~-~Gi~v~~i~~PtVp~~~~r 351 (381)
+++++. ..+|++-++++...+. +...++++ +.+||||||++||+.+++.+++.|++ +||||+||+|||||+|++|
T Consensus 315 RhLK~~eg~~lR~~hQ~~~~~lK~~L~~~GlPv~~~pSHIvPv~iGdA~~~k~~SD~LL~~hGIYVQpINyPTVpRG~ER 394 (427)
T TIGR01821 315 RHLKESEGQDLRRAHQERVKRLKKLLEALGLPVIDNPSHIVPVIIGDAAKCKKVSDLLLNKHGIYVQPINYPTVPRGTER 394 (427)
T ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCC
T ss_conf 99751376778999989999999999957777548877388767668688989989888717815712688889887502
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 99962878999999999999999988738
Q gi|254780486|r 352 LRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 352 lRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
|||+||+.||+.+||.|+++|..|++|++
T Consensus 395 LRitPtP~H~~~~id~Lv~AL~~~w~~l~ 423 (427)
T TIGR01821 395 LRITPTPVHTDKLIDDLVEALLLVWDRLG 423 (427)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 44268889887789999999999988613
No 4
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=100.00 E-value=0 Score=788.49 Aligned_cols=377 Identities=25% Similarity=0.455 Sum_probs=356.0
Q ss_pred CCCCHHHHHHHHHHHHHHCCCEEEE-------------CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 9886578999999999975983999-------------289768980344656677988999999999986378688722
Q gi|254780486|r 1 MKNIQMSFYEERLQKIKSKGRHRQL-------------LRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGS 67 (381)
Q Consensus 1 m~~~~~~~~~~~l~~~~~~g~~~~~-------------~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~s 67 (381)
|+...+.+++++|++++++|+||.+ .|||+++||+|||||||++||++++++++++ ++||+|+++|
T Consensus 1 m~~~~~~~~~~~L~~~~~~~l~R~~~~~~~~~~~~i~i~dG~~~lnf~SndYLGL~~~p~v~~a~~~a~-~~yG~gs~~S 79 (395)
T PRK06939 1 MSGAFYAQLREELEEIKAEGLYKEERVITSPQGADITVADGKEVINFCANNYLGLANHPELIAAAKAAL-DSHGFGMASV 79 (395)
T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHH-HHCCCCCCCC
T ss_conf 974899999999999997599864522147888758953893899977676557889989999999999-9729998776
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCHH
Q ss_conf 44368858999999998401288851674166024565566631689710045420267752666408764030568814
Q gi|254780486|r 68 RLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHNNIN 147 (381)
Q Consensus 68 r~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD~~ 147 (381)
|+++|++++|.+||++||+|+|+|+|++|||||.||+++|++|++++|+||+|+++||||++|+++|++++++|+|||++
T Consensus 80 rl~~G~~~~h~~LE~~lA~~~g~e~allf~SGy~aN~~~i~aL~~~~d~i~~D~l~HaSiidG~~ls~a~~~~f~HnD~~ 159 (395)
T PRK06939 80 RFICGTQDLHKELEQKLAKFLGTEDAILYSSCFDANGGLFETLLGKEDAIISDALNHASIIDGVRLCKAKRYRYANNDMA 159 (395)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCHH
T ss_conf 85747839999999999998699949997552776788999964799889984563588999998658947996689999
Q ss_pred HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCC-CC
Q ss_conf 78997643100024786079714621576613468999998631360898613112223477764011000013465-21
Q gi|254780486|r 148 SFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNV-IV 226 (381)
Q Consensus 148 ~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~-iv 226 (381)
+||++|++.+... ..++|||+|||||||||+|||++|++||++||++|+||||||+|++|++|+|+++++++.+++ |+
T Consensus 160 ~Le~~L~~~~~~~-~~~~~ivtegVfSMdGDiapL~~l~~L~~~y~a~L~vDeAH~~GvlG~~G~G~~e~~gl~~~vdi~ 238 (395)
T PRK06939 160 DLEAQLKEAKEAG-ARHKLIATDGVFSMDGDIANLPEICDLADKYDALVMVDDSHAVGFLGENGRGTVEHCGVMDRVDII 238 (395)
T ss_pred HHHHHHHHHHHCC-CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCEEEEEECCCCEEEECCCCCCHHHHCCCCCCCEEE
T ss_conf 9999999600215-862899996677778760159999999997273798614300003458998679980999886899
Q ss_pred CCCCCCCC-CCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 00134656-53026752451001000012110000135775025789887898862710224789999999987641797
Q gi|254780486|r 227 MHSCSKAL-GSSGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIANKKIG 305 (381)
Q Consensus 227 ~~TlsKa~-g~~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~~g 305 (381)
++|||||| |+.||||+|+++++++|++++++|||||++||+.+++++++++++++.++++++|+++++++.+.. ...|
T Consensus 239 ~gTlsKA~~G~~Ggfv~g~~~~i~~l~~~~r~~ifStalpp~~~aa~~~al~~~~~~~~~r~~L~~n~~~~r~~l-~~~g 317 (395)
T PRK06939 239 TGTLGKALGGASGGYTAGKKEVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGM-TAAG 317 (395)
T ss_pred ECCCHHHHHCCCCCEEECCHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH-HHCC
T ss_conf 773276662476514516678899999847122115799879999999999998749599999999999999999-9679
Q ss_pred C---CCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 8---99897289995897999999999997791898622888888870399962878999999999999999988738
Q gi|254780486|r 306 F---SSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 306 ~---~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
+ ++++||+||++||+..+..++++|+++||+|.+|+|||||+|++|||+++++.||++|||+++++|++|.+|+.
T Consensus 318 ~~~~~s~spI~pi~iG~~~~a~~~~~~L~~~Gi~v~~ir~PtVp~g~~rlRi~lta~ht~~did~lv~~l~~v~~~lG 395 (395)
T PRK06939 318 FTLGPGEHPIIPVMLGDAKLAQEFADRLLEEGVYVIGFSFPVVPKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKELG 395 (395)
T ss_pred CCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 986899999799996999999999999997797482078998898985699887877999999999999999999639
No 5
>PRK09064 5-aminolevulinate synthase; Validated
Probab=100.00 E-value=0 Score=776.31 Aligned_cols=370 Identities=30% Similarity=0.486 Sum_probs=347.1
Q ss_pred HHHHHHHHHHHHHCCCEEEEC------------------CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 789999999999759839992------------------89768980344656677988999999999986378688722
Q gi|254780486|r 6 MSFYEERLQKIKSKGRHRQLL------------------RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGS 67 (381)
Q Consensus 6 ~~~~~~~l~~~~~~g~~~~~~------------------~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~s 67 (381)
-.|++++|+++|++|+||++. .+|+++||||||||||++||+|++++.+++ .+||+|++||
T Consensus 4 ~~~~~~~l~~l~~~~l~r~~~~~~~~~g~~~~~~~~~~~g~r~~~~FsSNdYLGLs~~p~v~~a~~~a~-~~~G~gs~gS 82 (406)
T PRK09064 4 EAFFDDALDRLKAEGRYRVFADLERQAGRFPYATWHGPDGAREVTVWCSNDYLGMGQHPKVIEAMHEAL-DRCGAGAGGT 82 (406)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH-HHHCCCCCCC
T ss_conf 899999999999749985163024355788742575447986999846544357779999999999999-9848998777
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCC--CCCCCHHHHCCHHHHHHHHHCCCCCEEECCCC
Q ss_conf 4436885899999999840128885167416602456556663168--97100454202677526664087640305688
Q gi|254780486|r 68 RLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQA--TDLIVYDKLVHASIREGINSGKAQAIAIPHNN 145 (381)
Q Consensus 68 r~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~--~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD 145 (381)
|+++|++++|++||++||+|+|+|+|++|+|||+||++++++|+++ +|+|++|+++||||++|+++|++++++|+|||
T Consensus 83 rl~~G~~~~h~~LE~~LA~~~g~e~allf~SGy~AN~g~i~aL~~~~p~~~i~~D~l~HASiidG~rls~a~~~~f~HND 162 (406)
T PRK09064 83 RNISGTNHYHVELERELADLHGKEAALVFTSGYVSNDATLSTLAKLIPGCVIFSDELNHASMIEGIRRSGAEKHIFRHND 162 (406)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCC
T ss_conf 70405879999999999998588858997741788899999985679996899814233248999875599589947999
Q ss_pred HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCC-
Q ss_conf 1478997643100024786079714621576613468999998631360898613112223477764011000013465-
Q gi|254780486|r 146 INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNV- 224 (381)
Q Consensus 146 ~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~- 224 (381)
+++||++|++.+.. ..++||+|||||||||++||++|++||++||++|+||||||+||+|++|+|+++++++.+++
T Consensus 163 ~~~Le~~L~~~~~~---~~~iIvtEgVfSMdGDiapL~~l~~l~~~y~a~L~VDeAH~~Gv~G~~G~G~~e~~g~~~~vd 239 (406)
T PRK09064 163 VAHLEELLAAADPD---RPKLIAFESVYSMDGDIAPIAEICDLADKYNAMTYLDEVHAVGMYGPRGGGIAERDGLMDRID 239 (406)
T ss_pred HHHHHHHHHHCCCC---CCEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCE
T ss_conf 89999999837778---970999970001678765799999999860959999622102203688877398729866670
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 21001346565302675245100100001211000013577502578988789886271022478999999998764179
Q gi|254780486|r 225 IVMHSCSKALGSSGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIANKKI 304 (381)
Q Consensus 225 iv~~TlsKa~g~~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~~ 304 (381)
+++||||||||+.||||+|+++++++|++++++|||||++||+.++++++++++++++++++++|+++++++.+. ....
T Consensus 240 i~~gTfsKA~Gs~Ggfv~gs~~~id~L~~~ar~~IfStalpp~~~aa~~~al~~l~~~~~~r~~L~~n~~~~r~~-l~~~ 318 (406)
T PRK09064 240 IIEGTLAKAFGVMGGYIAGSASLIDAVRSYAPGFIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAS-LDAA 318 (406)
T ss_pred EEEEECCCCCCCCCEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-HHHC
T ss_conf 799216652357750431788999999871853002678999999999999999870907789999999999986-7744
Q ss_pred CC---CCCCCEEEEEECCHHHHHHHHHHHHHC-CEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 78---998972899958979999999999977-91898622888888870399962878999999999999999988738
Q gi|254780486|r 305 GF---SSQSHIQSIVIGDNKSCLNIAKNLQKK-GFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 305 g~---~~~s~I~~v~~gd~~~a~~~~~~L~~~-Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
|+ +++|||+||++||+.++..+++.|+++ ||+|.+|+|||||+|++||||++++.||++|||+++++|.++.+|++
T Consensus 319 G~~~~~s~spIipi~ig~~~~~~~~~~~Ll~~~Gi~v~~I~~PtVP~g~~rLRi~l~a~ht~edid~l~~~L~ev~~~~g 398 (406)
T PRK09064 319 GIPVMPNPSHIVPVIVGDPEKCKKASDRLLEEHGIYVQPINYPTVPRGTERLRITPTPLHTDEMIDHLVEALVEVWARLG 398 (406)
T ss_pred CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 99747999987999959999999999999986898781088998899984699886866999999999999999999809
No 6
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=0 Score=774.59 Aligned_cols=371 Identities=30% Similarity=0.461 Sum_probs=346.8
Q ss_pred HHHHHHHHHHHHHCCCEEEE------------------CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 78999999999975983999------------------289768980344656677988999999999986378688722
Q gi|254780486|r 6 MSFYEERLQKIKSKGRHRQL------------------LRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGS 67 (381)
Q Consensus 6 ~~~~~~~l~~~~~~g~~~~~------------------~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~s 67 (381)
-.||+++|++++++|+||.+ .+||+++||+|||||||++||++++++++++ ++||+|++||
T Consensus 5 ~~~~~~~l~~~~~~~lyr~~~~~~~~~~~~~~~~~~~~~~g~~~l~f~SNdYLGLs~~p~v~~a~~~a~-~~yG~gs~gS 83 (410)
T PRK13392 5 DSYFTKELDQLHQEGRYRVFADLEREAGSFPRAIDHGPETGKRVTIWCSNDYLGMGQHPDVIGAMVDAL-DRYGAGAGGT 83 (410)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHH-HHHCCCCCCC
T ss_conf 999999999999839987674035467887554202578993898977566657789999999999999-9809998775
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCC--CCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCC
Q ss_conf 443688589999999984012888516741660245655666316--897100454202677526664087640305688
Q gi|254780486|r 68 RLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQ--ATDLIVYDKLVHASIREGINSGKAQAIAIPHNN 145 (381)
Q Consensus 68 r~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~--~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD 145 (381)
|+++|++++|.+||++||+|+|+|+|++|+|||+||++++++|++ ++|+||+|+++||||++|+++|++++++|+|||
T Consensus 84 rl~~G~~~~h~~LE~~LA~f~g~e~allf~SGy~AN~g~i~aL~~~~~~d~i~~D~l~HaSiidG~rlS~a~~~~f~HnD 163 (410)
T PRK13392 84 RNISGTSHEHVLLERELADLHGKQSALLFTSGYVSNDAALSTLARLLPNCLILSDALNHASMIEGIRRSGAEKQVWAHND 163 (410)
T ss_pred CCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCEEEECCCC
T ss_conf 85627879999999999998699929997664788899999982779997999873122889987875589589971899
Q ss_pred HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCC-
Q ss_conf 1478997643100024786079714621576613468999998631360898613112223477764011000013465-
Q gi|254780486|r 146 INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNV- 224 (381)
Q Consensus 146 ~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~- 224 (381)
+++||++|++... ...++|++|||||||||++||++|++||++||++|+||||||+||+|++|+|+++++++.+++
T Consensus 164 ~~~Le~~L~~~~~---~~~~~IvtEgVfSMdGd~apL~~l~~L~~~y~a~L~VDeAH~~GvlG~~GrG~~e~~g~~~~vd 240 (410)
T PRK13392 164 LADLERQLASVDP---DRPKLICFESCYSMDGDFAPMAAICDLAEKYNAFTYVDEVHAVGLYGPRGGGIAERDGLMDRID 240 (410)
T ss_pred HHHHHHHHHHCCC---CCCEEEEECCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCE
T ss_conf 8999999975666---7855999725312478868999999999984959996131002413589987799728987667
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-HHHCC
Q ss_conf 21001346565302675245100100001211000013577502578988789886271022478999999998-76417
Q gi|254780486|r 225 IVMHSCSKALGSSGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDK-IANKK 303 (381)
Q Consensus 225 iv~~TlsKa~g~~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~-~~~~~ 303 (381)
|++||||||||+.||||+|++++++++++++++|||||++||++++++++++++++++++++++|++++.++.+ +...+
T Consensus 241 i~~gTlsKA~Gs~Ggfv~gs~~~id~l~~~ar~~IfStalpP~~~aa~~~al~~l~~~~~~r~~L~~~~~~lr~~l~~~g 320 (410)
T PRK13392 241 MFQGTLSKAFGCLGGYIAASADLVDFVRSFAPGFIFTTALPPPVVAGARAALRHLKTSQWERDAHQDRTASLKAKLNANG 320 (410)
T ss_pred EEECCCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 99850654123676034237377899987387543666789999999999999987195889999999999999998679
Q ss_pred CCC-CCCCCEEEEEECCHHHHHHHHHHHH-HCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 978-9989728999589799999999999-7791898622888888870399962878999999999999999988738
Q gi|254780486|r 304 IGF-SSQSHIQSIVIGDNKSCLNIAKNLQ-KKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 304 ~g~-~~~s~I~~v~~gd~~~a~~~~~~L~-~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
+.. +++|||+||++||+..+..++++|+ ++||+|.+|+|||||+|++||||++++.||++|||+++++|.++.+|++
T Consensus 321 ~~~~~s~s~Iipi~ig~~~~a~~~~~~ll~e~Gi~v~~i~~PtVP~g~~rLRi~lsA~Ht~~dId~l~~~L~~v~~e~g 399 (410)
T PRK13392 321 IPVLPSPSHIVPVMVGDPEKCKAISDLLMAEHGIYIQPINYPTVPRGTERLRITPSPLHTDEDIDALVAALVAIWRELA 399 (410)
T ss_pred CCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 9848999987999979999999999999875998998678883799974498775866899999999999999999809
No 7
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=100.00 E-value=0 Score=775.57 Aligned_cols=370 Identities=29% Similarity=0.470 Sum_probs=347.7
Q ss_pred HHHHHHHHHHHHHCCCEEEEC------------------CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
Q ss_conf 789999999999759839992------------------89768980344656677988999999999986378688722
Q gi|254780486|r 6 MSFYEERLQKIKSKGRHRQLL------------------RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGS 67 (381)
Q Consensus 6 ~~~~~~~l~~~~~~g~~~~~~------------------~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~s 67 (381)
-.|++++|++++++|+||++. .+|+++||||||||||++||++++++.+++ ++||+|++||
T Consensus 4 ~~~~~~~l~~~~~~~~yr~~~~~~~~~~~~~~~~~~~~~g~r~~i~f~SNdYLGL~~~p~v~~a~~~a~-~~yG~gs~~S 82 (404)
T PRK13393 4 EAYFQRQLDGLRREGRYRVFADLERQAGAFPRATHHGPDGPREVTVWCSNDYLGMGQHPAVLAAMHEAL-DTCGAGAGGT 82 (404)
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHH-HHHCCCCCCC
T ss_conf 999999999999749987674224457898624873378974799877434457678999999999999-9868998766
Q ss_pred CCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCC--CCCCCHHHHCCHHHHHHHHHCCCCCEEECCCC
Q ss_conf 4436885899999999840128885167416602456556663168--97100454202677526664087640305688
Q gi|254780486|r 68 RLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQA--TDLIVYDKLVHASIREGINSGKAQAIAIPHNN 145 (381)
Q Consensus 68 r~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~--~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD 145 (381)
|+++|++++|.+||++||+|+|+|+|++|+|||+||++++++|+++ +|+||+|+++|+||++|+++|++++++|+|||
T Consensus 83 rl~~G~~~~h~~LE~~LA~~~g~e~allf~SGy~AN~g~i~aL~~~~~~d~i~~D~l~HaSi~dG~rls~a~~~~f~HnD 162 (404)
T PRK13393 83 RNISGTNHYHVLLEAELADLHGKEAALLFTSGYVSNWAALSTLASRLPGCVILSDELNHASMIEGIRHSRAETRIFRHND 162 (404)
T ss_pred HHHHCCHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEECCC
T ss_conf 02018879999999999998699919998744888999999985789997899987545989998885479879982799
Q ss_pred HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCC-
Q ss_conf 1478997643100024786079714621576613468999998631360898613112223477764011000013465-
Q gi|254780486|r 146 INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNV- 224 (381)
Q Consensus 146 ~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~- 224 (381)
+++||++|++.+.. .+.+|++|||||||||++||++|++||++||++|+||||||+||+|++|+|+++++++.+++
T Consensus 163 ~~~Le~~L~~~~~~---~~~lIv~egVfSMdGDiapL~el~~L~~~y~a~L~VDeAH~~Gv~G~~G~G~~e~~gl~~~vd 239 (404)
T PRK13393 163 PADLERKLSDLDPH---APKLVAFESVYSMDGDIAPIAEICDVADKHGAMTYLDEVHAVGLYGPRGGGIAERDGLADRLT 239 (404)
T ss_pred HHHHHHHHHHCCCC---CCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCCE
T ss_conf 99999999856224---880899965535578856899999999740949998443200103689987888738988762
Q ss_pred CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 21001346565302675245100100001211000013577502578988789886271022478999999998764179
Q gi|254780486|r 225 IVMHSCSKALGSSGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIANKKI 304 (381)
Q Consensus 225 iv~~TlsKa~g~~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~~ 304 (381)
|+++|||||||+.||||+|+++++|+|++++++|||||++||+.+++++++++++++++++++++++++.++.+. ....
T Consensus 240 i~~gTfsKA~Gs~Gg~v~gs~~~id~L~~~ar~~IfStalpP~~~aa~~~al~~l~~~~~~r~~L~~n~~~~r~~-L~~~ 318 (404)
T PRK13393 240 IIEGTLAKAFGVVGGYITGSAALCDFIRSFASGFIFTTSLPPAVAAGALASIRHLKASSAERERHQDRVARLRAR-LDQA 318 (404)
T ss_pred EEEEECCCCCCCCCCEEECCHHHHHHHHHHCHHHHHCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-HHHC
T ss_conf 899717764335775031476889999984728652779889999999999999861969999999999999999-9966
Q ss_pred CC---CCCCCEEEEEECCHHHHHHHHHHHHHC-CEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 78---998972899958979999999999977-91898622888888870399962878999999999999999988738
Q gi|254780486|r 305 GF---SSQSHIQSIVIGDNKSCLNIAKNLQKK-GFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 305 g~---~~~s~I~~v~~gd~~~a~~~~~~L~~~-Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
|+ +++|||+||++||+..+..++++|+++ ||+|.+|+|||||+|++||||++++.||++||++++++|+++.+|++
T Consensus 319 G~~~~~s~s~Iipi~ig~~~~a~~~~~~Ll~~~Gi~v~~i~~PtVP~g~~rLRi~lsA~ht~~did~l~~~L~~v~~~lg 398 (404)
T PRK13393 319 GVPHMDNPSHIVPVMVGDAVLCKQISDLLLDRYGIYVQPINYPTVPRGTERLRITPSPLHTDADIEHLVQALSEIWARLG 398 (404)
T ss_pred CCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 99978999887999969999999999999861898999888985899973599876887999999999999999999839
No 8
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=100.00 E-value=0 Score=766.65 Aligned_cols=370 Identities=40% Similarity=0.649 Sum_probs=349.9
Q ss_pred CHHHHHHHHHHHHHHCCCEEEE------------CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 6578999999999975983999------------2897689803446566779889999999999863786887224436
Q gi|254780486|r 4 IQMSFYEERLQKIKSKGRHRQL------------LRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLC 71 (381)
Q Consensus 4 ~~~~~~~~~l~~~~~~g~~~~~------------~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~ 71 (381)
+.+.|++++|+++|.+|+||.+ ++||+++||+|||||||++||++++++.+++ ++||+|+++||+++
T Consensus 2 ~~~~~~~~~l~~~k~~~~~r~~~~~~~~~g~~i~i~gr~~lnFsSndYLGL~~hp~v~~a~~~a~-~~yG~g~~~SRl~~ 80 (387)
T PRK05958 2 SWLDWLDAALAQRRAAGLYRRLRPREGAQGRWLVVDGRRMLNFASNDYLGLANHPELIAAAQQAA-RRYGVGSGGSRLVT 80 (387)
T ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCEEEEEEECCCCCCCCCCHHHHHHHHHHH-HHHCCCCCCCCHHC
T ss_conf 87999999999999759986155446888885998997999856654247789999999999999-98389886563230
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCHHHHHH
Q ss_conf 88589999999984012888516741660245655666316897100454202677526664087640305688147899
Q gi|254780486|r 72 GNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHNNINSFAE 151 (381)
Q Consensus 72 G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD~~~Le~ 151 (381)
|++++|.+||++||+|+|+|+|++|||||+||++++++|++++|+||+|+++|+||++|+++|++++++|+|||+++||+
T Consensus 81 G~~~~h~~LE~~lA~~~g~e~allf~SGy~An~~~i~al~~~~d~ii~D~~~HaSi~dG~~ls~a~~~~f~HnD~~~Le~ 160 (387)
T PRK05958 81 GNSPAHEALEAELAEWFGAERALLFSSGYAANLAVLTALVGKGDLIVSDKLNHASLIDGARLSRAEVRRYPHNDVDALEA 160 (387)
T ss_pred CCCHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHH
T ss_conf 68699999999999986899679645523866656653278997899710046989998872799289968999999999
Q ss_pred HHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCC-CCCCCCC
Q ss_conf 764310002478607971462157661346899999863136089861311222347776401100001346-5210013
Q gi|254780486|r 152 NINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNN-VIVMHSC 230 (381)
Q Consensus 152 ~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~-~iv~~Tl 230 (381)
+|++++ +.++||++|||||||||++||++|++||++||++|+||||||+|++|++|+|+++++++.++ +|+++||
T Consensus 161 ~L~~~~----~~~~~iv~egvySMdGd~apL~~i~~L~~~y~~~L~vDeAH~~Gv~G~~G~G~~e~~~~~~~vdi~~gTl 236 (387)
T PRK05958 161 LLAKWR----AGRALIVTESVFSMDGDLAPLAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAEAAGLAGEIVILVGTL 236 (387)
T ss_pred HHHHCC----CCCEEEEECCCCCCCCCCCCHHHHHHHHHHCCEEEEECCHHHCCCCCCCCCCHHHHHCCCCCCEEEECCC
T ss_conf 997388----9875999746657788766899999999970847884262222633799984899847888868997605
Q ss_pred CCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-HCCCCC-CC
Q ss_conf 4656530267524510010000121100001357750257898878988627102247899999999876-417978-99
Q gi|254780486|r 231 SKALGSSGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIA-NKKIGF-SS 308 (381)
Q Consensus 231 sKa~g~~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~-~~~~g~-~~ 308 (381)
|||||+.||||+|++++++++++++++||||+++||+.++++++++++++++++++++|+++++++.+.. ..++.+ ++
T Consensus 237 sKA~gs~GG~i~g~~~~i~~l~~~a~~~ifStalpP~~~aa~~~al~~i~~~~~~~~~L~~n~~~~~~~l~~~g~~~~~s 316 (387)
T PRK05958 237 GKALGSSGAAVLGSETLIDYLINRARPFIFTTALPPAQAAAARAALRILREEPERRERLAALIARLRAGLRALGLGLPDS 316 (387)
T ss_pred CCCCCCCCEEEEECHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 44456774399507899999987390203158887799999999999986095999999999999986457539985899
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 8972899958979999999999977918986228888888703999628789999999999999999887
Q gi|254780486|r 309 QSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 309 ~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
+|||+||++|++..+.+++++|+++||++.+|+|||||+|++||||++++.||++|||+++++|+|++.+
T Consensus 317 ~spIipi~ig~~~~~~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~i~a~ht~~dId~l~~~l~e~~~~ 386 (387)
T PRK05958 317 ESAIQPLIVGDNERALALAAALQAQGFWVGAIRPPTVPAGTSRLRITLTAAHTEADIDRLLEALAEALAA 386 (387)
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9987999969999999999999977952831789988999844999978779999999999999999950
No 9
>PRK07179 hypothetical protein; Provisional
Probab=100.00 E-value=0 Score=755.04 Aligned_cols=368 Identities=24% Similarity=0.369 Sum_probs=341.6
Q ss_pred HHHHHHHHHHHHHHCCCEEEE--CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 578999999999975983999--289768980344656677988999999999986378688722443688589999999
Q gi|254780486|r 5 QMSFYEERLQKIKSKGRHRQL--LRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEE 82 (381)
Q Consensus 5 ~~~~~~~~l~~~~~~g~~~~~--~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~ 82 (381)
++.+|.+++-+...+|.|... .+|+++|||+|||||||++||+|++++.+++ ++||+|+++||+++|+.++|.+||+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~g~~~G~~~i~fsSNdYLGLs~hp~v~~a~~~ai-~~~G~g~~~Srl~~G~~~~h~~LE~ 106 (408)
T PRK07179 28 RLEKYFEERVNKNWNGKHLVLGKTPGPDAIILQSNDYLNLSGHPDIIKAQIAAL-QEYGDGLVMSAVFLHDDSPKPQFEK 106 (408)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHH-HHHCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 999999986232458985313588997356857666347889999999999999-9849998746803167589999999
Q ss_pred HHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCC
Q ss_conf 98401288851674166024565566631689710045420267752666408764030568814789976431000247
Q gi|254780486|r 83 EAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHNNINSFAENINKWRKSGGK 162 (381)
Q Consensus 83 ~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~ 162 (381)
+||+|+|+|+|++|+|||.||++++++|++++|.|++|+++||||++|++++++++++|+|||+++||++|+++.
T Consensus 107 ~LA~~~g~e~allf~SGy~AN~g~i~aL~~~~d~I~~D~~~HaSi~dG~rls~a~~~~f~HND~~~Le~~L~~~~----- 181 (408)
T PRK07179 107 KLAAFTGFESGLLCQSGWAANVGLLQTIADPNTPVYIDFFAHMSLWEGVRAAGAQAHPFRHNDVDHLRRQIERHG----- 181 (408)
T ss_pred HHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCC-----
T ss_conf 999986899299987538999999999679998899988778889876761488579947999999999998469-----
Q ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCC-CCCCCCCCCCCCEEEEE
Q ss_conf 86079714621576613468999998631360898613112223477764011000013465-21001346565302675
Q gi|254780486|r 163 GFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNV-IVMHSCSKALGSSGALV 241 (381)
Q Consensus 163 ~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~-iv~~TlsKa~g~~GG~i 241 (381)
..+|++|||||||||+|||++|++||++||++|+||||||+|++|++|+|+++++++.+++ |+++|||||||+.||||
T Consensus 182 -~~iIv~egVfSMdGDiapL~~l~~la~~y~a~L~VDEAH~~Gv~G~~G~G~~~~~gl~~~vdi~~gTlsKA~G~~GGfi 260 (408)
T PRK07179 182 -PGIIVVDSVYSTTGTIAPLVDIVDIAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAGRAGII 260 (408)
T ss_pred -CCEEEEEECCCCCCCCCCHHHHHHHHHHHCEEEEEECCCEEEEECCCCCCHHHHCCCCCCCEEEEEEHHHHHHHCCCCE
T ss_conf -9779997423578876689999999987267988614350523679998779984998787289937178676376634
Q ss_pred ECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC---CCCCCEEEEEEC
Q ss_conf 24510010000121100001357750257898878988627102247899999999876417978---998972899958
Q gi|254780486|r 242 GSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIANKKIGF---SSQSHIQSIVIG 318 (381)
Q Consensus 242 ~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~~g~---~~~s~I~~v~~g 318 (381)
+|+++++|+|++++++|||||++||+.++++.+++++++++++++++|+++++++.. .....|+ .++|||+||++|
T Consensus 261 ~gs~~~id~L~~~ar~~IfStal~P~~~aa~~aal~ii~~~~~~r~~L~~n~~~~r~-~L~~~G~~i~~s~spIvpi~~G 339 (408)
T PRK07179 261 TCPAELAEYFPFVSYPAIFSSTLLPHEIAGLEATLEVIESADERRARLHANARFLRE-GLSELGYNIRSSESQIIALETG 339 (408)
T ss_pred ECCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-HHHHCCCCCCCCCCCEEEEECC
T ss_conf 237999999997187745566678999999999999986299999999999999999-9983799978999997999859
Q ss_pred CHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 97999999999997791898622888888870399962878999999999999999988738
Q gi|254780486|r 319 DNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 319 d~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
++..+..++++|+++||++.+|+|||||+|++||||++++.||++|||+++++|.++.+|++
T Consensus 340 ~~~~a~~~~~~L~~~Gi~v~~i~~PtVP~g~~rlRislsA~ht~~dId~ll~~l~~~~~e~~ 401 (408)
T PRK07179 340 SERNTEVLRDALEERNVFGAVFCAPATPKNRALIRLSLNADLTKSDLDRVLEVCREARDEVD 401 (408)
T ss_pred CHHHHHHHHHHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999999997896284167998999981699874877999999999999999999809
No 10
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase; InterPro: IPR011282 This entry represents a narrowly defined clade of animal and bacterial (almost exclusively proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homologue from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.; GO: 0008890 glycine C-acetyltransferase activity.
Probab=100.00 E-value=0 Score=755.06 Aligned_cols=371 Identities=26% Similarity=0.466 Sum_probs=353.7
Q ss_pred HHHHHHHHHHHHCCCEE-------------EECCC--CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC
Q ss_conf 89999999999759839-------------99289--7689803446566779889999999999863786887224436
Q gi|254780486|r 7 SFYEERLQKIKSKGRHR-------------QLLRR--QDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLC 71 (381)
Q Consensus 7 ~~~~~~l~~~~~~g~~~-------------~~~~~--~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~ 71 (381)
.+++.+|+.++.+|.++ ++.|| +++||||.||||||++||+|++|+.++++ .+|+|.+|.|++|
T Consensus 3 ~~l~~eL~~i~~~GlfK~ERiI~s~Q~a~irv~dGv~~~vlNfCANNYLGLs~HP~~I~AA~~Al~-~~GfGlsSVRFIC 81 (395)
T TIGR01822 3 AILAAELESIREAGLFKSERIITSPQGADIRVADGVSREVLNFCANNYLGLSDHPDVIQAAKDALD-EHGFGLSSVRFIC 81 (395)
T ss_pred HHHHHHHHHHHHCCCCEECCEEECCCCCCEEEECCCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHH-HCCCCEEEEEEEC
T ss_conf 578889999985697200206723798705885586423144310000564675579999999887-4389513432121
Q ss_pred CCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCHHHHHH
Q ss_conf 88589999999984012888516741660245655666316897100454202677526664087640305688147899
Q gi|254780486|r 72 GNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHNNINSFAE 151 (381)
Q Consensus 72 G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD~~~Le~ 151 (381)
||.++|++||++||+|+++||++||+|+|.||-++|.+|.++.|.||+|++|||||+||+||++|++++|.||||+|||.
T Consensus 82 GTQd~HK~LE~~iA~F~~~EDtILY~scFDANgGlFE~LLg~eDAiiSDaLNHASIIDGvRLCKAkrYRY~~~dm~dLe~ 161 (395)
T TIGR01822 82 GTQDLHKELEAKIAAFLGTEDTILYASCFDANGGLFETLLGEEDAIISDALNHASIIDGVRLCKAKRYRYANNDMADLEA 161 (395)
T ss_pred CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf 67435689999999971653044545666305542201047544221022243102300354223343230588889999
Q ss_pred HHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCC-CCCCCC
Q ss_conf 7643100024786079714621576613468999998631360898613112223477764011000013465-210013
Q gi|254780486|r 152 NINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNV-IVMHSC 230 (381)
Q Consensus 152 ~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~-iv~~Tl 230 (381)
.|++.++... ...+|+|||||||||++|||++|+.||++||++++|||.|++|++|++|||..|..++.+++ |++|||
T Consensus 162 ~L~~A~~~Ga-r~~Li~tDGvFSMDG~iA~L~~i~~LA~~Y~ALv~~DecHA~GflG~~GRG~~E~~gv~g~vdI~tgTL 240 (395)
T TIGR01822 162 QLKEAQAAGA-RHRLIATDGVFSMDGTIAPLDEICDLADKYDALVMVDECHATGFLGATGRGTAELLGVMGRVDIITGTL 240 (395)
T ss_pred HHHHHHHCCC-CEEEEEECCEEECCCCEECHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHHCCCCCCEEEEECCH
T ss_conf 9999997389-589986466020687310767899999855987887443342332789986142137675257740543
Q ss_pred CCCCC-CEEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC---
Q ss_conf 46565-30267524510010000121100001357750257898878988627102247899999999876417978---
Q gi|254780486|r 231 SKALG-SSGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIANKKIGF--- 306 (381)
Q Consensus 231 sKa~g-~~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~~g~--- 306 (381)
+|||| +.|||..++++++++|||++|||.||+++||.+++++.++|++|+...+++++|.+|.++|+. .....||
T Consensus 241 GKAlGGA~GGfTta~~evv~lLRQRsRPYLFSNslpP~vvga~~~vl~~l~~s~~l~~~L~~n~~~FR~-~m~AaGFd~~ 319 (395)
T TIGR01822 241 GKALGGASGGFTTARKEVVELLRQRSRPYLFSNSLPPAVVGASIKVLDMLEGSNELRDRLAENTRYFRE-RMEAAGFDVK 319 (395)
T ss_pred HHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH-HHHHCCCCCC
T ss_conf 345114567643774679998531265110004630689999999999984205799999999998787-5342474017
Q ss_pred CCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 99897289995897999999999997791898622888888870399962878999999999999999988738
Q gi|254780486|r 307 SSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 307 ~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
++.+||+|||++|...+.+++++|+|+||||..|.||.||||++|||++++|.|++|+|+++++++.+|..|+.
T Consensus 320 p~~hpI~pvMlyDA~~Aq~~A~~Ll~~GiYv~GFfYPVVPKGqARIRvQ~SA~H~~e~l~~a~~AF~~~G~~lg 393 (395)
T TIGR01822 320 PAEHPIIPVMLYDAKLAQRFAERLLEEGIYVIGFFYPVVPKGQARIRVQISAVHTEEQLDRAVEAFTRVGRELG 393 (395)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 89885102321147899999999987792899745264378861244410256898899999999999878626
No 11
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=100.00 E-value=0 Score=741.78 Aligned_cols=370 Identities=38% Similarity=0.619 Sum_probs=348.3
Q ss_pred HHHHHHHHHHHHHHCCCEEEE------------CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
Q ss_conf 578999999999975983999------------28976898034465667798899999999998637868872244368
Q gi|254780486|r 5 QMSFYEERLQKIKSKGRHRQL------------LRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCG 72 (381)
Q Consensus 5 ~~~~~~~~l~~~~~~g~~~~~------------~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G 72 (381)
...+++++|+.++.++++|.+ .++++++||+|||||||++||++++++.+++ ++||.|++|||+++|
T Consensus 3 ~~~~~~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~nf~SNdYLGLa~~~~~~~a~~~~~-~~~g~g~~gsR~i~G 81 (388)
T COG0156 3 FLSFLRQALQALKAEGLYRGLRALDRRQGLAIRADGRKVLNFCSNDYLGLASHPELIEAAKAAI-RRYGVGAGGSRLISG 81 (388)
T ss_pred HHHHHHHHHHHHHHHCCCCCHHHCCCCCCCCEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHH-HHHCCCCCCCCCCCC
T ss_conf 4789999999987503412201024457753321784067644377435268878999999999-981999897670447
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCHHHHHHH
Q ss_conf 85899999999840128885167416602456556663168971004542026775266640876403056881478997
Q gi|254780486|r 73 NYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHNNINSFAEN 152 (381)
Q Consensus 73 ~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD~~~Le~~ 152 (381)
++++|.+||++||+|+|+|+|++|+|||.||++++++|++++|+||+|++|||||++|+++|++++++|+|||+++||++
T Consensus 82 ~~~~h~~LE~~lA~f~g~e~al~f~SGy~AN~~~i~~l~~~~dli~~D~lnHASiidG~rls~a~~~~f~HnD~~~Le~~ 161 (388)
T COG0156 82 TSDLHVELEEELADFLGAEAALLFSSGFVANLGLLSALLKKGDLIFSDELNHASIIDGIRLSRAEVRRFKHNDLDHLEAL 161 (388)
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHCCCCEEEECCCCHHHHHHH
T ss_conf 82899999999999849984899715311177788885688868998010205399889857883898268999999999
Q ss_pred HHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCC--CCCCCCC
Q ss_conf 64310002478607971462157661346899999863136089861311222347776401100001346--5210013
Q gi|254780486|r 153 INKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNN--VIVMHSC 230 (381)
Q Consensus 153 l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~--~iv~~Tl 230 (381)
|++.+...+ .+++|+||||||||||+|||++|++||++|+++|+|||||++|++|++|+|+++++|+.+. +|+++||
T Consensus 162 l~~~~~~~~-~~~~IvtegVfSMdGdiApL~~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTl 240 (388)
T COG0156 162 LEEARENGA-RRKLIVTEGVFSMDGDIAPLPELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTL 240 (388)
T ss_pred HHHHHCCCC-CCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEC
T ss_conf 876222478-7549998234218998577899999999839589998520102437998617887388876514999875
Q ss_pred CCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-CCCCC-CC
Q ss_conf 46565302675245100100001211000013577502578988789886271022478999999998764-17978-99
Q gi|254780486|r 231 SKALGSSGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIAN-KKIGF-SS 308 (381)
Q Consensus 231 sKa~g~~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~-~~~g~-~~ 308 (381)
|||||+.||||+|++.++|+|++++++|||||++||+.++++.++++++++.++++++++++..++..... ..+.. ++
T Consensus 241 sKAlGs~Gg~v~g~~~~~d~L~~~ar~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~~~~~~~s 320 (388)
T COG0156 241 GKALGSSGGYIAGSAALIDYLRNRARPFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKALGLVLLPS 320 (388)
T ss_pred HHHHCCCCCEEECCHHHHHHHHHHCCCEECCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 05432268446575999999997186522147789788999999999987587889999999999998888529765788
Q ss_pred CCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 89728999589799999999999779189862288888887039996287899999999999999998
Q gi|254780486|r 309 QSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 309 ~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
.|||+|+++||+..+.++...|+++||++.+|+|||||+|++|||+++++.||++||++++++|.++.
T Consensus 321 ~s~I~pv~~gd~~~a~~~s~~l~~~Gi~v~~i~~PTVp~gtarlRi~lta~ht~~~I~~l~~~l~~~~ 388 (388)
T COG0156 321 ESPIIPVILGDEERALEASRALLEEGIYVSAIRPPTVPKGTARLRITLTAAHTEEDIDRLAEALSEVG 388 (388)
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHC
T ss_conf 89866169688899999999999779257123689989996508987167799999999999998529
No 12
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=100.00 E-value=0 Score=705.78 Aligned_cols=342 Identities=27% Similarity=0.414 Sum_probs=318.1
Q ss_pred CCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHC-------CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCC
Q ss_conf 976898034465667798899999999998637-------8688722443688589999999984012888516741660
Q gi|254780486|r 28 RQDIWDFTSHDYLALSSSTLLREKILSSLDSKI-------PIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGY 100 (381)
Q Consensus 28 ~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~-------g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~ 100 (381)
+...|||+|||||||++||++++++.+++ ++| |+|++|||+++|++++|.+||++||+|+|+|+|++|+|||
T Consensus 3 ~~~~lnFsSNDYLGLs~~p~v~~a~~~a~-~~y~~~~~~~g~Gs~gSrl~~G~~~~h~~LE~~lA~f~g~e~allf~sGy 81 (370)
T PRK05937 3 SSLSIDFVTNDFLGFSRSTTLVHEVEKRY-RLYCEQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPEAFIVPSGY 81 (370)
T ss_pred CCEEEECCCCCCCCCCCCHHHHHHHHHHH-HHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCHH
T ss_conf 77078240320038789989999999999-98731257898768687826278699999999999986999399987668
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHH
Q ss_conf 24565566631689710045420267752666408764030568814789976431000247860797146215766134
Q gi|254780486|r 101 AANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKA 180 (381)
Q Consensus 101 ~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~a 180 (381)
+||++++++|++++|+||+|+++||||++|++++++++++|+|||+++||++|++.+.. +..++||++|||||||||+|
T Consensus 82 ~AN~~~i~al~~~~d~i~~D~l~HaSi~dG~rls~a~~~~f~Hnd~~~Le~~L~~~~~~-~~~~~~iv~egVfSMdGdia 160 (370)
T PRK05937 82 MANLGLCAHLSSVTDYVLWDEQVHISVVYSLSVISGKHQSFRHNDLDHLESLLESCRAV-SFGRIFIFVCSVYSFKGTLA 160 (370)
T ss_pred HHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHC-CCCCEEEEEECCCCCCCCCC
T ss_conf 89999999608999989996306199999998649986996899989999999853311-78855999940566778755
Q ss_pred HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEEC
Q ss_conf 68999998631360898613112223477764011000013465210013465653026752451001000012110000
Q gi|254780486|r 181 PLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSGALVGSNKIIYDYLINYAKPFIY 260 (381)
Q Consensus 181 pL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~GG~i~~~~~ii~~l~~~~~~~if 260 (381)
||++|++||++|+++|+||||||+|++|++|+|+++++|..+.+++++|||||||+.||||+|++++++++++++++|||
T Consensus 161 pL~~l~~l~~~y~a~l~vDeAH~~Gv~G~~GrG~~e~~g~~~~~~i~~TlsKAlGs~Ggfv~~s~~~i~~l~~~ar~~If 240 (370)
T PRK05937 161 PLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKALGSMGAALLSSSEVKQDLMLNSPPLRY 240 (370)
T ss_pred CHHHHHHHHHHCCCEEEEECCHHCCCCCCCCCCHHHHCCCCCCCEEEEEHHHHHHHCCEEEECCHHHHHHHHHHCCCCCC
T ss_conf 89999999998197899733000043379997578873998877898132566210653898288999999983964003
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEE
Q ss_conf 1357750257898878988627102-247899999999876417978998972899958979999999999977918986
Q gi|254780486|r 261 TTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINITDKIANKKIGFSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRA 339 (381)
Q Consensus 261 st~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~~~~~~~~g~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~ 339 (381)
||++||+.++++.++++++..++++ |++++++.+++.+ .++..++++|+||++++... ..+.++|+++||+|.+
T Consensus 241 StalpP~~~aa~~~al~~l~~e~~~~r~~l~~~~~~~~~----~~~~~~~~~i~pI~~~~~~~-~~~~~~L~~~Gi~v~~ 315 (370)
T PRK05937 241 STGLPPHALISIQVAYDFLSQEGELARKQLFRLKEYFAQ----KFSSAAPGCVQPIFLPDISE-QELYSKLVETGIRVGV 315 (370)
T ss_pred CCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH----HCCCCCCCCEEEEEECCHHH-HHHHHHHHHCCEEEEE
T ss_conf 675589999999999999985959999999999999998----50667899748898083899-9999999978977986
Q ss_pred ECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 22888888870399962878999999999999999988738
Q gi|254780486|r 340 IRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 340 i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
|+||||| ||||++++.||+||||+++++|++|++|..
T Consensus 316 Ir~PtVP----rLRi~l~A~HT~edId~Lv~~L~~~~~~~~ 352 (370)
T PRK05937 316 VCFPTKP----FLRVNLHAFNTEDEVDILVSVLHSYLEKCQ 352 (370)
T ss_pred ECCCCCC----EEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 8989988----378861866699999999999999999986
No 13
>PRK07505 hypothetical protein; Provisional
Probab=100.00 E-value=0 Score=701.43 Aligned_cols=355 Identities=25% Similarity=0.379 Sum_probs=328.9
Q ss_pred HHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE
Q ss_conf 97598399928976898034465667798899999999998637868872244368858999999998401288851674
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYF 96 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~ 96 (381)
+++|+.+++.|||+++||+|||||||++||+|++++.+++ ++||++++|||+++|++++|.+||++||+|+|.| |++|
T Consensus 37 ~~~~~~~~~~dGr~~lnF~SndYLGL~~hp~v~~aa~~a~-~~yG~g~~~s~~~~g~~~~h~~LE~~LA~~~g~e-al~f 114 (405)
T PRK07505 37 KSEGKVITLTDGKEFVNFVSCSYLGLDNHPAIIDGAVDAL-RRTGVLDLSSSRTRVQSQILKDLEESLSELFGAS-VLTF 114 (405)
T ss_pred CCCCCEEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHH-HHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-EEEE
T ss_conf 3888859813897897504355358889999999999999-9868898764864148399999999999873987-7987
Q ss_pred CCCCHHHHHHHHHHC------CCCCCCCHHHHCCHHH--HHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEE
Q ss_conf 166024565566631------6897100454202677--52666408764030568814789976431000247860797
Q gi|254780486|r 97 GSGYAANMAILSTLP------QATDLIVYDKLVHASI--REGINSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIV 168 (381)
Q Consensus 97 ~sG~~An~~~i~~l~------~~~d~ii~D~~~HaSi--~~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv 168 (381)
+|||.||++++++|+ +++|+||+|+++|+|| ++|++++++++++|+|||+++||++++++ .+++||
T Consensus 115 ~sg~~An~g~i~~Lasg~~~~~~~~~ii~D~~~HaSl~~~~g~~~s~a~~~~f~HnD~~~Le~~~~~~------~~~~iV 188 (405)
T PRK07505 115 TSCSAAHLGILPLLASGHLTGGKPPHMVFDKYAHASLAILKGICADETEVETIDHNDLDALEDICKTN------KRVAYV 188 (405)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHC------CCCEEE
T ss_conf 32689999999999722224899878999876437845566775489968986799999999987456------994899
Q ss_pred ECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEE-EEHHC--CCCCCCCCCCCCCCCCEEEEEE-CC
Q ss_conf 14621576613468999998631360898613112223477764011-00001--3465210013465653026752-45
Q gi|254780486|r 169 VESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLT-HIIEE--RNNVIVMHSCSKALGSSGALVG-SN 244 (381)
Q Consensus 169 ~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~-~~~~~--~~~~iv~~TlsKa~g~~GG~i~-~~ 244 (381)
+|||||| ||++||++|++||++||++|+||||||+|++|++|+|++ ++++. .+.+|+++|||||||+.||||+ ++
T Consensus 189 ~EgVfSM-GdiApL~~l~~L~~~y~a~L~vDEAH~~Gv~G~~GrG~~~~~~~~~~~~~~i~~gTlsKA~Gs~GG~V~~g~ 267 (405)
T PRK07505 189 ADGVYSM-GGIAPVKELVDLQDKYGLFVYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIATSLGKAFGASGGVIMLGY 267 (405)
T ss_pred EEEEECC-CCHHHHHHHHHHHHHCCEEEEEECCCEECCCCCCCCCCHHHHHCCCCCCEEEEEEECCCHHCCCCEEEEECC
T ss_conf 9842558-983459999999875676999965210012059997231687578888417998003210015615999785
Q ss_pred CCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHH
Q ss_conf 10010000121100001357750257898878988627--1022478999999998764179789989728999589799
Q gi|254780486|r 245 KIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK--PALHKSLLQLINITDKIANKKIGFSSQSHIQSIVIGDNKS 322 (381)
Q Consensus 245 ~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~--~~~~~~l~~~~~~~~~~~~~~~g~~~~s~I~~v~~gd~~~ 322 (381)
+++++++++++++|+||+++||+.++++++++++++.+ ++++++|++++++++++... ....+.+||+||++|++..
T Consensus 268 ~~~~~~l~~~ar~~ifStal~p~~~aa~~as~~i~~~~e~~~~~~~L~~ni~~~~~~l~~-~~~~s~~pI~~v~ig~~~~ 346 (405)
T PRK07505 268 AEQIRLILRYAGPYAFSQPLNVAALGAISASAEIHLSSELDQLQQKLHNNIALFDSLIPT-EQSGSFLPIRLIYIGDEDT 346 (405)
T ss_pred HHHHHHHHHHCCCHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC-CCCCCCCCEEEEEECCHHH
T ss_conf 999999997184111366447999999999999985754799999999999999974587-7789999879999499999
Q ss_pred HHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999999977918986228888888703999628789999999999999999887387
Q gi|254780486|r 323 CLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGNS 381 (381)
Q Consensus 323 a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~s 381 (381)
+..+++.|+++||+|.+|+|||||+|++||||++++.||++||++++++|+++++|.|.
T Consensus 347 a~~~~~~L~e~Gi~v~~i~~PtVp~g~~rlRi~l~A~hT~edId~l~~~L~~v~~e~~~ 405 (405)
T PRK07505 347 AIKYAKQLKDAGFYTSPVFFPVVAKGNAGLRIMFRADHTNEEIKRLCSLLKEILADYNA 405 (405)
T ss_pred HHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 99999999978901875638838979824998748889999999999999999998559
No 14
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=100.00 E-value=0 Score=676.22 Aligned_cols=344 Identities=37% Similarity=0.593 Sum_probs=323.8
Q ss_pred CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHH
Q ss_conf 76898034465667798899999999998637868872244368858999999998401288851674166024565566
Q gi|254780486|r 29 QDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILS 108 (381)
Q Consensus 29 ~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~ 108 (381)
|+++||+|||||||++||++++++.+++ ++||+|+++||+++|++++|++||++||+|+|+|+|++|||||+||+++++
T Consensus 1 r~~l~f~s~dYLgL~~~p~~~~a~~~a~-~~~G~g~~~sr~~~G~~~~~~~lE~~la~~~g~e~al~~~sG~~an~~~i~ 79 (349)
T cd06454 1 KKVLNFCSNDYLGLANHPEVIEAAKEAL-DKYGVGAGGSRLISGTSDLHEELEEELAEFHGKEAALVFSSGYAANDGVLS 79 (349)
T ss_pred CCEEEEECCCCCCCCCCHHHHHHHHHHH-HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH
T ss_conf 9589976663247898999999999999-973998887673647879999999999998699819995570787788886
Q ss_pred HHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHH
Q ss_conf 63168971004542026775266640876403056881478997643100024786079714621576613468999998
Q gi|254780486|r 109 TLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKI 188 (381)
Q Consensus 109 ~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l 188 (381)
++++++|+|++|+.+|+||++|++++++++++|+|||+++|+++|++.+... .+++|++|||||||||++||++|.+|
T Consensus 80 ~l~~~~d~i~~D~~~H~si~~G~~~s~a~~~~f~Hnd~~~L~~~l~~~~~~~--~~~~iv~egv~Sm~Gd~apL~~l~~l 157 (349)
T cd06454 80 TLAGKGDLIISDSLNHASIIDGIRLSGAKKRIFKHNDMEDLEKLLREARRPY--GKKLIVTEGVYSMDGDIAPLPELVDL 157 (349)
T ss_pred HCCCCCCEEEECCCCCHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHCCC--CCEEEEECCCCCCCCCCCCHHHHHHH
T ss_conf 2057897797415343728863652446479978999999999998532258--97699965767888776798999999
Q ss_pred HHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCC-CCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCC
Q ss_conf 63136089861311222347776401100001346-52100134656530267524510010000121100001357750
Q gi|254780486|r 189 ANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNN-VIVMHSCSKALGSSGALVGSNKIIYDYLINYAKPFIYTTSPSPI 267 (381)
Q Consensus 189 ~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~-~iv~~TlsKa~g~~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~ 267 (381)
|++||++|+||||||+|++|++|+|++++.+..++ +++++|||||||+.||||+|++++++++++++++++||+++||+
T Consensus 158 ~~~~~~~livDeAH~~Gv~G~~G~G~~~~~~~~~~~di~~~tlsKa~G~~Gg~v~g~~~~i~~l~~~~~~~i~s~~l~p~ 237 (349)
T cd06454 158 AKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGAVGGYIAGSKELIDYLRSYARGFIFSTSLPPA 237 (349)
T ss_pred HHHHCCEEEEECHHHCCCCCCCCCCHHHHCCCCCCCEEEECCCCCCCCCCCCEEECCHHHHHHHHHHCCCCCCCCCCCHH
T ss_conf 99829789972323317415888767886589886679985365434677712425356899998619885777776899
Q ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC----CCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCC
Q ss_conf 257898878988627102247899999999876417978----9989728999589799999999999779189862288
Q gi|254780486|r 268 LAVVACEALKLIKRKPALHKSLLQLINITDKIANKKIGF----SSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPP 343 (381)
Q Consensus 268 ~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~~g~----~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~P 343 (381)
.+++++++++++++.++++++++++++++.+... ..|+ ...+||++++.+++..+.+++++|+++||++.+++||
T Consensus 238 ~~aa~~~al~~l~~~~~~~~~L~~~~~~~~~~l~-~~g~~i~~~~~~~i~~~~~~~~~~a~~~~~~L~~~Gi~v~~~~~P 316 (349)
T cd06454 238 VAAAALAALEVLQGGPERRERLQENVRYLRRGLK-ELGFPVGGSPSHIIPPLIGDDPAKAVAFSDALLERGIYVQAIRYP 316 (349)
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH-HCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCC
T ss_conf 9999999999986395889999999999999999-769975799997279998699999999999998879628637989
Q ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 888887039996287899999999999999998
Q gi|254780486|r 344 TVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 344 tVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
|||++++||||++++.||+||||+++++|+||.
T Consensus 317 tvp~~~~~lRi~~sa~ht~edId~li~~l~ev~ 349 (349)
T cd06454 317 TVPRGTARLRISLSAAHTKEDIDRLLEALKEVG 349 (349)
T ss_pred CCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHC
T ss_conf 789998359998687799999999999999749
No 15
>KOG1359 consensus
Probab=100.00 E-value=0 Score=598.55 Aligned_cols=346 Identities=26% Similarity=0.427 Sum_probs=318.3
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHH
Q ss_conf 89768980344656677988999999999986378688722443688589999999984012888516741660245655
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAI 106 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~ 106 (381)
..+..||||.||||||++||+|+++.+++++ .||.|.+++|+++|+.++|+.||.+||.|.|+||++++||||.||.++
T Consensus 65 ~~k~ilnFcaNnYLGLsshPeii~a~~~ale-eyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rED~ilypscfdANag~ 143 (417)
T KOG1359 65 SDKKILNFCANNYLGLSSHPEIINAGQKALE-EYGAGLSSVRFICGTQDIHKLLESKIAQFHGREDTILYPSCFDANAGA 143 (417)
T ss_pred CCCCEEEECCCCCCCCCCCHHHHHHHHHHHH-HHCCCCCCEEEEECCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHH
T ss_conf 6655044224543344578388898999999-828786431688445579999999999870877548733100344377
Q ss_pred HHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHH
Q ss_conf 66631689710045420267752666408764030568814789976431000247860797146215766134689999
Q gi|254780486|r 107 LSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLV 186 (381)
Q Consensus 107 i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~ 186 (381)
+.++..|.|.|++|++|||||+||+||++ +|+|.|+-+||..+....+ ....+|++||+||||||++||.+|.
T Consensus 144 feail~pedAvfSDeLNhASIIdGirLck----ry~h~dv~~l~~~l~~a~k---~r~klv~TDg~FSMDGdiaPl~ei~ 216 (417)
T KOG1359 144 FEAILTPEDAVFSDELNHASIIDGIRLCK----RYRHVDVFDLEHCLISACK---MRLKLVVTDGVFSMDGDIAPLEEIS 216 (417)
T ss_pred HHHHCCHHHHHHCCCCCCCHHHHHHHHHH----HHCCCHHHHHHHHHHHHHH---HEEEEEEECCEECCCCCCCCHHHHH
T ss_conf 87744825412100002203432467776----6445126778887777433---2179998546121478733389999
Q ss_pred HHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCC-CCCCCCCCCCC-CEEEEEECCCCCCCCCCCCCCCEECCCCC
Q ss_conf 98631360898613112223477764011000013465-21001346565-30267524510010000121100001357
Q gi|254780486|r 187 KIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNV-IVMHSCSKALG-SSGALVGSNKIIYDYLINYAKPFIYTTSP 264 (381)
Q Consensus 187 ~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~-iv~~TlsKa~g-~~GG~i~~~~~ii~~l~~~~~~~ifst~l 264 (381)
+|+++||++|++||+|++|++|++|+|+.|.+++..++ |+.+||+||+| +.|||+.|++.+++.|++++|||+||+++
T Consensus 217 ~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~GGyttgp~~li~llrqr~RpylFSnsl 296 (417)
T KOG1359 217 QLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGASGGYTTGPKPLISLLRQRSRPYLFSNSL 296 (417)
T ss_pred HHHHHCCCEEEEEECCCCEEECCCCCCHHHHHCCCCCCEEHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCEEECCCC
T ss_conf 99986293799860431056557888738873777764020424566624777887468756899998528861421789
Q ss_pred CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCC---CCCEEEEEECCHHHHHHHHHHHHHCCEEEEEEC
Q ss_conf 75025789887898862710224789999999987641797899---897289995897999999999997791898622
Q gi|254780486|r 265 SPILAVVACEALKLIKRKPALHKSLLQLINITDKIANKKIGFSS---QSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIR 341 (381)
Q Consensus 265 ~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~~g~~~---~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~ 341 (381)
||+++..+.++++++.......++.+.+.+.+.+ .....||+- ..||+||++||.+.+..++++|+++||+|..|+
T Consensus 297 ppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~-~me~aGftIsg~~hPI~pv~lGda~lA~~~ad~lLk~Gi~Vigfs 375 (417)
T KOG1359 297 PPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFRE-FMEAAGFTISGASHPICPVMLGDARLASKMADELLKRGIYVIGFS 375 (417)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCEECCCCCCCCCEECCCHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 8055415699999998647999989889999999-887528243178887423231638888888999985571698625
Q ss_pred CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 8888888703999628789999999999999999887387
Q gi|254780486|r 342 PPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGNS 381 (381)
Q Consensus 342 ~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~s 381 (381)
||+||+|++|||++++|.||+||||++++++.+|.+-.|.
T Consensus 376 ~PvVP~gkariRVqiSAaHt~edid~~i~Af~~vgr~~~~ 415 (417)
T KOG1359 376 YPVVPKGKARIRVQISAAHTEEDIDRLIEAFSEVGRFLNV 415 (417)
T ss_pred CCCCCCCCEEEEEEEEHHCCHHHHHHHHHHHHHHHHHHCC
T ss_conf 8767888447999970104788899999999998875236
No 16
>KOG1360 consensus
Probab=100.00 E-value=0 Score=591.01 Aligned_cols=369 Identities=28% Similarity=0.435 Sum_probs=340.8
Q ss_pred HHHHHHHHHHHHCCCEEEEC----------------CC--CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 89999999999759839992----------------89--7689803446566779889999999999863786887224
Q gi|254780486|r 7 SFYEERLQKIKSKGRHRQLL----------------RR--QDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSR 68 (381)
Q Consensus 7 ~~~~~~l~~~~~~g~~~~~~----------------~~--~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr 68 (381)
.||++++++-+++-.||.+. +. +++..||||||||++.||+|.+|..++++ +||-|.+|.|
T Consensus 131 ~ff~~~i~kKk~DhsYRvFk~vNRlA~~fP~A~~~se~t~k~VtVWCSNDYLgms~Hp~V~~A~~~tl~-~hG~GAGGTR 209 (570)
T KOG1360 131 RFFREEIDKKKRDHSYRVFKNVNRLAKEFPLAHRYSEATEKKVTVWCSNDYLGMSRHPEVLDAMHDTLD-RHGAGAGGTR 209 (570)
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH-HCCCCCCCCC
T ss_conf 899999876622332478877767654166132305011685489844762133478279999999999-7188867765
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCC--CCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCH
Q ss_conf 43688589999999984012888516741660245655666316--8971004542026775266640876403056881
Q gi|254780486|r 69 LLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQ--ATDLIVYDKLVHASIREGINSGKAQAIAIPHNNI 146 (381)
Q Consensus 69 ~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~--~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD~ 146 (381)
.++|+..-|.+||++||++.++|+||+|+|+|.||-+.+.+|++ |++.|++|+.|||||+.|+|.|+++.+.|||||+
T Consensus 210 NIsG~s~~hv~LE~eLA~LHqK~aALlFsSCfVANDstLftLak~lpgcei~SD~gNHASMI~GIrns~v~K~IFrHND~ 289 (570)
T KOG1360 210 NISGHSKHHVRLEAELADLHQKEAALLFSSCFVANDSTLFTLAKKLPGCEIFSDEGNHASMIQGIRNSRVPKHIFRHNDL 289 (570)
T ss_pred CCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHCCCCCEEECCCCH
T ss_conf 46778713555999999884676103554213416458999997789968853665338888776515975224246998
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCC-C
Q ss_conf 478997643100024786079714621576613468999998631360898613112223477764011000013465-2
Q gi|254780486|r 147 NSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNV-I 225 (381)
Q Consensus 147 ~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~-i 225 (381)
++|+++|++..+.-|+ +|..|+||||+|.+|||+||++++++||++.++||+|+.|.||++|.|+.|.-|+.+.+ |
T Consensus 290 ~hL~~lL~~~~~svPK---ivAFEtVhSM~GavcpleelcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDi 366 (570)
T KOG1360 290 DHLEQLLQSSPKSVPK---IVAFETVHSMDGAVCPLEELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDI 366 (570)
T ss_pred HHHHHHHHHCCCCCCC---EEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEEEHHHHHCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 9999999757988882---6887664026777577899977887717545310123100215777876656775203220
Q ss_pred CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHCC
Q ss_conf 1001346565302675245100100001211000013577502578988789886271--02247899999999876417
Q gi|254780486|r 226 VMHSCSKALGSSGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKP--ALHKSLLQLINITDKIANKK 303 (381)
Q Consensus 226 v~~TlsKa~g~~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~--~~~~~l~~~~~~~~~~~~~~ 303 (381)
+.|||+|+||+.||||++++.++|++|.++++|||||+|||.+.+.+++++++++.++ .+|+.-+.+..+..++ ...
T Consensus 367 IsGTLgKafGcVGGYIAat~~LvDmiRSyAaGFIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~-l~~ 445 (570)
T KOG1360 367 ISGTLGKAFGCVGGYIAATRKLVDMIRSYAAGFIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQL-LME 445 (570)
T ss_pred CCCCHHHHCCCCCCEEHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH
T ss_conf 0140455416654233004469999997468668733798288872899999986325478999999999999999-987
Q ss_pred CCC---CCCCCEEEEEECCHHHHHHHHHHHHH-CCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 978---99897289995897999999999997-79189862288888887039996287899999999999999998873
Q gi|254780486|r 304 IGF---SSQSHIQSIVIGDNKSCLNIAKNLQK-KGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 304 ~g~---~~~s~I~~v~~gd~~~a~~~~~~L~~-~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
+|+ +.+|+|+|+.+||+..+.++++.|+. +||||..|+|||||+|+++|||++|..||.+.++.+++++..++++.
T Consensus 446 ~GiPVi~~pSHIiPv~vgda~l~~~~sd~Li~~h~iYvQaINyPTV~rG~E~LRiaPTP~HT~~mm~~lv~~l~~vw~~v 525 (570)
T KOG1360 446 LGIPVIPNPSHIIPVRVGDAALAKQASDILISKHNIYVQAINYPTVARGTERLRIAPTPHHTPQMMNILVNALLDVWNEV 525 (570)
T ss_pred CCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 49863478865333550677777777899887527578852687456660134217999887899999999999999972
Q ss_pred C
Q ss_conf 8
Q gi|254780486|r 380 N 380 (381)
Q Consensus 380 ~ 380 (381)
+
T Consensus 526 ~ 526 (570)
T KOG1360 526 G 526 (570)
T ss_pred C
T ss_conf 9
No 17
>KOG1357 consensus
Probab=100.00 E-value=0 Score=527.70 Aligned_cols=372 Identities=24% Similarity=0.385 Sum_probs=330.4
Q ss_pred HHHHHHHHHHHHHC----------CCEEEECC---------------CCEEEECCCCCCCCCCCC-HHHHHHHHHHHHHH
Q ss_conf 78999999999975----------98399928---------------976898034465667798-89999999999863
Q gi|254780486|r 6 MSFYEERLQKIKSK----------GRHRQLLR---------------RQDIWDFTSHDYLALSSS-TLLREKILSSLDSK 59 (381)
Q Consensus 6 ~~~~~~~l~~~~~~----------g~~~~~~~---------------~~~~l~f~s~dYLGl~~~-p~v~~a~~~a~~~~ 59 (381)
=+||.+++..+-++ |++..+.| ...+||++|+|||||++. -...+++.+++ .+
T Consensus 88 e~FY~Rriy~ri~Dc~~RPi~~VPG~~v~l~dR~S~D~n~tfk~tG~~~~~lNlgSYNYLGFa~~~g~ca~~~~~~~-~k 166 (519)
T KOG1357 88 ESFYSRRIYRRIRDCFERPICSVPGAWVDLMDRVSDDYNWTFKYTGTRSRCLNLGSYNYLGFAQSVGPCAEASLKSF-DK 166 (519)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCEEEECCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHH-HH
T ss_conf 89999999998766533887689875688332120478855884364466542033223342346887761899999-98
Q ss_pred CCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCE
Q ss_conf 78688722443688589999999984012888516741660245655666316897100454202677526664087640
Q gi|254780486|r 60 IPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAI 139 (381)
Q Consensus 60 ~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~ 139 (381)
||++.|+||-..|+++.|++||+..|+|+|+|+|++|+.||.+|...+++|.+|+.+|++|++||+||+.|+|+|+|.++
T Consensus 167 ygl~~css~~e~G~~~~hkelE~l~A~f~g~e~a~vF~mGf~TNs~~~p~l~~~gsLIiSDelNHaSi~~GaRLSgAtiR 246 (519)
T KOG1357 167 YGLSRCSSRHEAGTTEEHKELEELVARFLGVEDAIVFSMGFATNSMNIPSLLGKGSLIISDELNHASLITGARLSGATTR 246 (519)
T ss_pred HCCCCCCCCHHCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCCCCEEEHHCCCHHEEECCCCCCCEEE
T ss_conf 46333664200363788878999999866886448974154345567622445886164400033002303031585479
Q ss_pred EECCCCHHHHHHHHHHHHHCC------CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCE
Q ss_conf 305688147899764310002------47860797146215766134689999986313608986131122234777640
Q gi|254780486|r 140 AIPHNNINSFAENINKWRKSG------GKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKG 213 (381)
Q Consensus 140 ~f~HnD~~~Le~~l~~~~~~~------~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G 213 (381)
+|+||||++||++|++..... +...++|++||+|||+|.+++||+++++|++|.++|++||||++|.+|++|||
T Consensus 247 VfkHNdm~~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrg 326 (519)
T KOG1357 247 VFRHNDMQGLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRG 326 (519)
T ss_pred EEECCCHHHHHHHHHHHHHCCCCCCCCCCHHEEEEECCCCCCCCEECCCHHHHHHHCCCCEEEEEECCCCCCCCCCCCCC
T ss_conf 98638877799999988752787768850220342011010567211619988752043379984010002553788874
Q ss_pred EEEEHHCC--CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCC------CH
Q ss_conf 11000013--46521001346565302675245100100001211000013577502578988789886271------02
Q gi|254780486|r 214 LTHIIEER--NNVIVMHSCSKALGSSGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKP------AL 285 (381)
Q Consensus 214 ~~~~~~~~--~~~iv~~TlsKa~g~~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~------~~ 285 (381)
+|+++++. +.+|+||||.|+||+.|||++|+++++++++..+.+..|++++||++++..+.+++++..++ +.
T Consensus 327 vce~~g~d~~dvDImMGtftKSfga~GGyiagsk~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k 406 (519)
T KOG1357 327 VCEYFGVDPEDVDIMMGTFTKSFGAAGGYIAGSKELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQK 406 (519)
T ss_pred EEECCCCCCHHHEEECCEEHHHCCCCCCEECCCHHHHHHCCCCCCCEEECCCCCHHHHHHHHHHHHHHCCCCCCCHHHHH
T ss_conf 22346888246202201002104566660028388774100478842420367828899999878752488764077999
Q ss_pred HHHHHHHHHHHHHHHHCCCCC----CCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCC
Q ss_conf 247899999999876417978----9989728999589799999999999779189862288888887039996287899
Q gi|254780486|r 286 HKSLLQLINITDKIANKKIGF----SSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVD 361 (381)
Q Consensus 286 ~~~l~~~~~~~~~~~~~~~g~----~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t 361 (381)
.+++.+|.+++.. .+...|| +.+||++|+++..+.+...+.++|+++++-|..+.||++|.-.+|.|+|+++.||
T Consensus 407 ~~~l~~ns~yfr~-~l~~~gfivyG~~dSpVvplll~~~~k~~~f~r~~l~~nigvVvvgfPatpl~e~r~R~c~Sa~ht 485 (519)
T KOG1357 407 IERLAENSRYFRW-ELQKMGFIVYGNNDSPVVPLLLYGPAKIVAFSREMLERNIGVVVVGFPATPLLESRARFCLSASHT 485 (519)
T ss_pred HHHHHHHHHHHHH-HHCCCCEEEECCCCCCCCEEEECCCCCCCHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCC
T ss_conf 9998750289987-510482899167888764366327531407899998647359997279945777677865423555
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999998873
Q gi|254780486|r 362 EPTIVKLFDILPQIISEG 379 (381)
Q Consensus 362 ~edi~~~~~~l~~v~~E~ 379 (381)
+|+++++++.++++-++.
T Consensus 486 ~e~ld~~l~~i~~~g~~~ 503 (519)
T KOG1357 486 KEDLDRALEVIDRVGDED 503 (519)
T ss_pred HHHHHHHHHHHHHHCHHH
T ss_conf 788999999886633112
No 18
>KOG1358 consensus
Probab=100.00 E-value=0 Score=421.94 Aligned_cols=355 Identities=23% Similarity=0.387 Sum_probs=307.7
Q ss_pred EEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCH
Q ss_conf 39992897689803446566779889999999999863786887224436885899999999840128885167416602
Q gi|254780486|r 22 HRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYA 101 (381)
Q Consensus 22 ~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~ 101 (381)
+.+.++|++++||+|+|||||..++++.+.+...+ ++||+|+||+|.++|+.+.|.+||++||+|+|.|++++++.||.
T Consensus 87 ~~~~i~G~~~~N~aS~NfL~l~~~~~ike~a~~~l-rkyGvGsCGPrGFYGt~DvHldlE~~iakF~G~E~aivYs~gF~ 165 (467)
T KOG1358 87 PHVTIDGKDVLNFASANFLGLIENEEIKEEASFTL-RKYGVGSCGPRGFYGTIDVHLDLEKRIAKFMGTEDAIVYSYGFS 165 (467)
T ss_pred CCEEECCCEEECCCCHHHHHHCCCHHHHHHHHHHH-HHHCCCCCCCCCCCCCCEEECCCHHHHHHHHCCCCEEEECCCCC
T ss_conf 86576384001112100355405677899999999-97388776787643122110466778987508864266326630
Q ss_pred HHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHC---CCC---CCCEEEECCCCCC
Q ss_conf 4565566631689710045420267752666408764030568814789976431000---247---8607971462157
Q gi|254780486|r 102 ANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHNNINSFAENINKWRKS---GGK---GFPWIVVESIYSM 175 (381)
Q Consensus 102 An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~---~~~---~~~~vv~egv~Sm 175 (381)
|..++||+++++||+|+.|+.++..|+.|+.+|+..+..|+||||++||+.+.+.... .++ .+.+|++||+|-.
T Consensus 166 ti~S~ipafsKrGDIi~~de~~nfaIq~GlqlSRS~i~~Fkhndm~~lerll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N 245 (467)
T KOG1358 166 TIESAIPAFSKRGDIIFVDEAVNFAIQKGLQLSRSTISYFKHNDMEDLERLLPEQEDEDQKNPKKALTRRFIVVEGLYAN 245 (467)
T ss_pred HHHHCCHHHHCCCCEEEEEHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHCCCCCHHHHHCCCCCCCEEEEEEEEECCC
T ss_conf 03200012311476799862102998877764020037854788788997545762223314444541379999764047
Q ss_pred CCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCC--CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC
Q ss_conf 6613468999998631360898613112223477764011000013--46521001346565302675245100100001
Q gi|254780486|r 176 DGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEER--NNVIVMHSCSKALGSSGALVGSNKIIYDYLIN 253 (381)
Q Consensus 176 ~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~--~~~iv~~TlsKa~g~~GG~i~~~~~ii~~l~~ 253 (381)
.|+++||++|++++.||.+.+++||..++|++|++|||+++|+++. +.++++++++-|+++.|||++|+.-++++.|-
T Consensus 246 ~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~iDiv~~sm~~alas~GgFc~G~~~i~~hQrL 325 (467)
T KOG1358 246 TGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDIDIVTASMETALASGGGFCAGKSFIADHQRL 325 (467)
T ss_pred CCCCCCCHHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEECCEEEEEEEEC
T ss_conf 77503509999987662589998333332430356866324689880311256511444431467543255236753001
Q ss_pred CCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC----CCCCCEEEEEECC--------HH
Q ss_conf 21100001357750257898878988627102247899999999876417978----9989728999589--------79
Q gi|254780486|r 254 YAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIANKKIGF----SSQSHIQSIVIGD--------NK 321 (381)
Q Consensus 254 ~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~~g~----~~~s~I~~v~~gd--------~~ 321 (381)
.+.+|+||.++||..+.++.+++.++..+|+..+.|+.....++......-++ +..|||+.+.+.. ..
T Consensus 326 Sg~~Y~fSAslPp~la~aa~~ai~i~~~~p~~~~~L~~k~~~~H~~l~~~s~~~v~~~~~SPi~hl~l~~~~~s~e~e~~ 405 (467)
T KOG1358 326 SGSGYCFSASLPPYLAGAAIKAILIEEWNPEIVQPLRAKVAKFHAALSSNSGFIVSGSPESPIIHLQLERSYGSREKEEK 405 (467)
T ss_pred CCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHCCCCEEEECCCCCCEEEEEECCCCCCHHHHHH
T ss_conf 56625651347555545677777777618402222220252104666047725984686772001232455566677999
Q ss_pred HHHHHHHHHHHCCEEEEEECCC----CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999779189862288----88888703999628789999999999999999887
Q gi|254780486|r 322 SCLNIAKNLQKKGFDIRAIRPP----TVPINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 322 ~a~~~~~~L~~~Gi~v~~i~~P----tVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
...++.+..+.+|+++.--+|- ..|. .+-|||++++.|++||++++++.++++..+
T Consensus 406 lL~eivd~~i~~~~ll~~a~~~~~~e~~~~-~pSiri~~~a~~seeel~ra~~~ik~~~~~ 465 (467)
T KOG1358 406 LLEEIVDKCIAEGVLLTRAKYLEKLERCPI-PPSIRICVSAGMSEEELERAAELIKEVASA 465 (467)
T ss_pred HHHHHHHHHHHHCCEEHHHHHHHHCCCCCC-CCCEEEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf 999999999862531003145530334799-985799870799999999999999999986
No 19
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases; InterPro: IPR004636 This family of proteins, for which ornithine aminotransferases form an outgroup, consists mostly of proteins designated acetylornithine aminotransferase. However, the two very closely related members from Escherichia coli are assigned different enzymatic activities. One is acetylornithine aminotransferase (2.6.1.11 from EC), ArgD, an enzyme of arginine biosynthesis, while another is succinylornithine aminotransferase, an enzyme of the arginine succinyltransferase pathway, an ammonia-generating pathway of arginine catabolism . Members of this family may also act on ornithine, like ornithine aminotransferase (2.6.1.13 from EC) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (2.6.1.17 from EC, DapC, an enzyme of lysine biosynthesis) . ; GO: 0008483 transaminase activity, 0006525 arginine metabolic process.
Probab=100.00 E-value=2.4e-43 Score=290.35 Aligned_cols=338 Identities=20% Similarity=0.294 Sum_probs=253.8
Q ss_pred HHHHH-HHHHHHCCCEEEE-CCCCEEEECCCCCCCCCC------CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
Q ss_conf 99999-9999975983999-289768980344656677------988999999999986378688722443688589999
Q gi|254780486|r 8 FYEER-LQKIKSKGRHRQL-LRRQDIWDFTSHDYLALS------SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLE 79 (381)
Q Consensus 8 ~~~~~-l~~~~~~g~~~~~-~~~~~~l~f~s~dYLGl~------~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~ 79 (381)
|.... +.-.|++|.+.++ .+||+||||.+ |.+ .||+++|++.+++++.+.+| -++ +++.-.+
T Consensus 6 Y~R~~d~~i~rG~G~~v~Dd~~GK~YlDf~a----GIAV~~LGH~hP~l~Ea~~~Q~~kL~H~S----NlY--~~~~~~~ 75 (402)
T TIGR00707 6 YGRLPDIVIVRGKGAYVYDDVNGKEYLDFVA----GIAVNALGHAHPKLVEALKEQLEKLVHVS----NLY--YTEPQEE 75 (402)
T ss_pred CCCCCCEEEECCCCCEEEECCCCCEEEEECC----CHHHHCCCCCCHHHHHHHHHHHHHHEEEC----CCC--CCCHHHH
T ss_conf 6887650163166408987678946520100----22440113578899999998662406607----765--5808999
Q ss_pred HHHHHHHHCCCC-------CEEEECCCCHHHHHHHHHHCCCC--------CCCCHHHHC-CHHHHHHHHHCCC-------
Q ss_conf 999984012888-------51674166024565566631689--------710045420-2677526664087-------
Q gi|254780486|r 80 LEEEAADFFGFE-------KMLYFGSGYAANMAILSTLPQAT--------DLIVYDKLV-HASIREGINSGKA------- 136 (381)
Q Consensus 80 lE~~lA~~~g~e-------~al~~~sG~~An~~~i~~l~~~~--------d~ii~D~~~-HaSi~~g~~ls~a------- 136 (381)
|-++|.++.+.+ ..++||||..||.++|. |+++. .-||+=+++ |.--+-++-+.+-
T Consensus 76 LA~kLv~~~~~dgGqhd~~rvFFCNSGaEAnEAAlK-lARk~~~~~g~~k~~ivaf~naFHGRT~g~LsaTgqpKy~~~F 154 (402)
T TIGR00707 76 LAEKLVEHSGADGGQHDASRVFFCNSGAEANEAALK-LARKYTGDKGKEKKKIVAFENAFHGRTMGALSATGQPKYQKPF 154 (402)
T ss_pred HHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHH-HHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHCCCCCCCCCCC
T ss_conf 999999997046883023266751474789999999-9898640227886538888707763004543004776456857
Q ss_pred -----CCEEECCCC-HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHH-----HHHHHHHHHHHCCEEEEECCCCCCC
Q ss_conf -----640305688-14789976431000247860797146215766134-----6899999863136089861311222
Q gi|254780486|r 137 -----QAIAIPHNN-INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKA-----PLDDLVKIANDYDGFIVVDEAHATG 205 (381)
Q Consensus 137 -----~~~~f~HnD-~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~a-----pL~~i~~l~~~y~~~LivDEah~~G 205 (381)
.+...+.|| +++|++.+..... ++.+.-|++|.|-. +|.+- -|+++++||+++|++||+||+| +|
T Consensus 155 ~PLvpgf~y~~yNDe~~~l~~~i~~~~e--g~rtAAvivEpiQG-EgGV~pa~~~fL~a~r~lc~~~~~LLI~DEVQ-tG 230 (402)
T TIGR00707 155 EPLVPGFKYVPYNDEIEALKEAIDDEKE--GDRTAAVIVEPIQG-EGGVVPADKEFLKALRELCEDKDALLIFDEVQ-TG 230 (402)
T ss_pred CCCCCCCEEECCCCCHHHHHHHHHCCCC--CCCEEEEEEEEECC-CCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEE-EC
T ss_conf 8842381244488978999998502577--87188999853217-86533487789999999986489189994475-28
Q ss_pred CCCCCCCEEE-EEHH--CCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCC--CCCCCEECCCCCCCCHHHHHHHHHH
Q ss_conf 3477764011-0000--1346521001346565302---67524510010000--1211000013577502578988789
Q gi|254780486|r 206 VCGPLGKGLT-HIIE--ERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLI--NYAKPFIYTTSPSPILAVVACEALK 277 (381)
Q Consensus 206 v~G~~G~G~~-~~~~--~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~--~~~~~~ifst~l~P~~~aaa~aal~ 277 (381)
+||||+..+ +|++ +.||+| |++||+|. | |++++.+++.+.|. .|+.|| +.||++|+|++++|+
T Consensus 231 -~GRTG~~fA~~Hygse~~PDi~---T~AKgLGg-G~PiGA~~~~e~~a~~~~~G~HGsTF----GGNPLAc~Aa~~vl~ 301 (402)
T TIGR00707 231 -LGRTGKLFAYEHYGSEVEPDII---TLAKGLGG-GVPIGAVLAKEEVAEALTPGDHGSTF----GGNPLACAAALAVLE 301 (402)
T ss_pred -CCCCHHHHHHHCCCCCCCCHHH---HHHHHHHC-CCHHHHHEEHHHHHHHCCCCCCCCCC----CCCHHHHHHHHHHHH
T ss_conf -7743322331206884552387---54055527-82022320236787315898986667----873899999877666
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHH-HCCCC-------CCCCCCEEEEEECCH-HHHHHHHHHHHHCCEEEEEECCCCCCCC
Q ss_conf 88627102247899999999876-41797-------899897289995897-9999999999977918986228888888
Q gi|254780486|r 278 LIKRKPALHKSLLQLINITDKIA-NKKIG-------FSSQSHIQSIVIGDN-KSCLNIAKNLQKKGFDIRAIRPPTVPIN 348 (381)
Q Consensus 278 ~l~~~~~~~~~l~~~~~~~~~~~-~~~~g-------~~~~s~I~~v~~gd~-~~a~~~~~~L~~~Gi~v~~i~~PtVp~~ 348 (381)
+|+++ .+.++..+..++|.+.. ...-. +.+..-++-+.+..+ ..+.++.++|+++|++|.+ .+
T Consensus 302 ~i~~~-~~l~~v~~~G~~f~~~L~~~~~~~~~l~k~VRG~GLmlG~e~~~~~~~a~~~~~~a~~~GlLv~~-------Ag 373 (402)
T TIGR00707 302 VIEKE-RLLEKVKEKGDYFKERLEELIKKYIDLIKEVRGKGLMLGIELEAPSVAAKDIVKEAREKGLLVNT-------AG 373 (402)
T ss_pred HHHCC-CHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCEEEEEEEECCCCCCHHHHHHHHHHCCCEEEC-------CC
T ss_conf 55051-04789999889999999986177667401532312346556427865589999999848926881-------78
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 70399962878999999999999999988
Q gi|254780486|r 349 TARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 349 ~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
..++||.|+...++|+|++++++|+++++
T Consensus 374 ~~v~Rf~PPL~i~~e~i~~~~~~l~~~~~ 402 (402)
T TIGR00707 374 PKVLRFVPPLIITEEEIDEAVDALEEAIE 402 (402)
T ss_pred CCEEEECCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 87066157864458899999999999829
No 20
>pfam00155 Aminotran_1_2 Aminotransferase class I and II.
Probab=100.00 E-value=2.4e-41 Score=277.88 Aligned_cols=324 Identities=24% Similarity=0.314 Sum_probs=244.3
Q ss_pred CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--------CCCEEEECCCC
Q ss_conf 7689803446566779889999999999863786887224436885899999999840128--------88516741660
Q gi|254780486|r 29 QDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG--------FEKMLYFGSGY 100 (381)
Q Consensus 29 ~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g--------~e~al~~~sG~ 100 (381)
+++|||+||||++. .+|++++|+++++. ++++..+|++.-+.+|++.+|+|++ .|+.+++.+|.
T Consensus 1 ~d~i~l~~~~~~~~-~~p~v~~A~~~a~~-------~~~~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~e~~I~~t~G~ 72 (351)
T pfam00155 1 TDKINLGSNEYLGD-TLPAVAKAEKDALA-------GGTRNLYGPTDGLPELREALAKFLGRSPVLKLDREAAVVFGSGA 72 (351)
T ss_pred CCEEEEECCCCCCC-CCHHHHHHHHHHHC-------CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCH
T ss_conf 97089338999999-88999999999974-------99998079818789999999998601029999947489981139
Q ss_pred HHHH-HHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC-------CCHHHHHHHHHHHHHCCCCCCCEEEECCC
Q ss_conf 2456-556663168971004542026775266640876403056-------88147899764310002478607971462
Q gi|254780486|r 101 AANM-AILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH-------NNINSFAENINKWRKSGGKGFPWIVVESI 172 (381)
Q Consensus 101 ~An~-~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~~vv~egv 172 (381)
.+++ .++.++++++|.|+.+.-.|.+....+++.+++++.+++ .|+++|++.+++ ...+|++.+.
T Consensus 73 ~~~l~~~~~~l~~~gd~Vli~~P~y~~~~~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~-------~~~~i~i~~P 145 (351)
T pfam00155 73 GANIEALIFLLANPGDAILVPAPTYASYIRIARLAGGEVVRYPLYDSNDFHLDFDALEAALKE-------KPKVVLHESP 145 (351)
T ss_pred HHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCC-------CCEEEEECCC
T ss_conf 999999999966994999988998688999999839977898456434779899999975415-------9869998899
Q ss_pred CCCCCCHHH---HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEE-EEHHCCCCCCCCCCCCCCCCCEE---EEEECCC
Q ss_conf 157661346---8999998631360898613112223477764011-00001346521001346565302---6752451
Q gi|254780486|r 173 YSMDGDKAP---LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLT-HIIEERNNVIVMHSCSKALGSSG---ALVGSNK 245 (381)
Q Consensus 173 ~Sm~G~~ap---L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~-~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~ 245 (381)
++++|.+.+ +++|.++|++||+++++||+|+..+++..+.... ......+++|+++||||+||..| ||+++++
T Consensus 146 ~NPTG~~~~~~~l~~l~~~a~~~~~~ii~DE~Y~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~~~G~R~G~i~~~~ 225 (351)
T pfam00155 146 HNPTGTVAPLEELEKLLDLAKEHNILLLVDEAYAGFVFGSPDAVATRALLAEGPNLLVVGSFSKAFGLAGWRVGYILGNA 225 (351)
T ss_pred CCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCCCCCHHHHCCCCCCEEEEECCHHHCCCCCCCEEEEEECH
T ss_conf 19877776889999998653028889998266333152798886133311457867999136152379351559999899
Q ss_pred CCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC---CCCCCEEEEEECCHHH
Q ss_conf 0010000121100001357750257898878988627102247899999999876417978---9989728999589799
Q gi|254780486|r 246 IIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIANKKIGF---SSQSHIQSIVIGDNKS 322 (381)
Q Consensus 246 ~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~~g~---~~~s~I~~v~~gd~~~ 322 (381)
++++.++....++.+++..+++.+++........+..++.+++++++.+++.+. ....|+ .+++.+....-.++..
T Consensus 226 ~~i~~l~~~~~~~~~s~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~l~~~-L~~~g~~~~~p~g~~~~~~~~~~~~ 304 (351)
T pfam00155 226 AVISQLRKLARPFYSSTHLQAAAAAALSDPLLVASELEEMRQRIKERRDYLRDG-LEAAGLSVLPSQAGFFLLTGLDPET 304 (351)
T ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCEECCCCCEEEEEEECCCCC
T ss_conf 999999997166874789999999999584556899999999999999999999-9878985727994499999787322
Q ss_pred HHHHHHHHHHC-CEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 99999999977-918986228888888703999628789999999999999
Q gi|254780486|r 323 CLNIAKNLQKK-GFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDIL 372 (381)
Q Consensus 323 a~~~~~~L~~~-Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l 372 (381)
..+++++|+++ ||++.|..++.+| +++||+++ .+|+|+|++++++|
T Consensus 305 ~~~~~~~Ll~~~gV~v~pG~~fg~~---~~iRis~a-~~s~e~i~~~~~rl 351 (351)
T pfam00155 305 AKELAQVLLEEVGVYVTPGSSPGVP---GWLRITVA-GGTEEELEELLEAI 351 (351)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCCC---CEEEEEEC-CCCHHHHHHHHHHC
T ss_conf 9999999997598999778888999---90899817-89999999999419
No 21
>TIGR01885 Orn_aminotrans ornithine--oxo-acid transaminase; InterPro: IPR010164 Ornithine aminotransferase catalyses the conversion of L-ornithine and a 2-oxo acid to L-glutamate 5-semialdehyde and an L-amino acid. This enzyme is found in low-GC bacteria, where it is responsible for the fourth step in arginine biosynthesis, and in the mitochondrial matrix of eukaryotes, where it controls L-ornithine levels in tissues. In human hereditary ornithine aminotransferase deficiency, the elevated levels of intraocular concentrations of ornithine are responsible for gyrate atrophy, which affects the CNS and peripheral nervous system ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding.
Probab=100.00 E-value=2.5e-39 Score=265.28 Aligned_cols=337 Identities=18% Similarity=0.271 Sum_probs=248.1
Q ss_pred HHHHCCCEEEECCCCEEEECCC-CCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--C
Q ss_conf 9997598399928976898034-4656677-9889999999999863786887224436885899999999840128--8
Q gi|254780486|r 15 KIKSKGRHRQLLRRQDIWDFTS-HDYLALS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG--F 90 (381)
Q Consensus 15 ~~~~~g~~~~~~~~~~~l~f~s-~dYLGl~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g--~ 90 (381)
-.++.|.|..+.+||+|+||=| |+-..-. .||.|++|+.++++ +..+ .||.+. .+.+.++|+.+|+|+| +
T Consensus 28 ~~~g~G~~v~D~eG~~Y~D~LSaYSavNqGHchP~i~~Al~~Q~~-KlTL---~Sraf~--nd~lg~~~~~~t~LfgGk~ 101 (426)
T TIGR01885 28 LQRGKGAYVWDPEGREYLDFLSAYSAVNQGHCHPKIVNALKNQAD-KLTL---TSRAFH--NDVLGEFAKYLTKLFGGKY 101 (426)
T ss_pred HHHCCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH-HCCC---HHHHHH--CCHHHHHHHHHHHHCCCCC
T ss_conf 750683089814888864100255440137677168999999985-1371---027660--6035789999997549951
Q ss_pred CCEEEECCCCHHHHHHHHHHCCCC------------CCCCHHHHCCHHHH---------------HHHHHC----CCCCE
Q ss_conf 851674166024565566631689------------71004542026775---------------266640----87640
Q gi|254780486|r 91 EKMLYFGSGYAANMAILSTLPQAT------------DLIVYDKLVHASIR---------------EGINSG----KAQAI 139 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~l~~~~------------d~ii~D~~~HaSi~---------------~g~~ls----~a~~~ 139 (381)
+..|.+|||..|..+++. |+++- ..|.+.-+=|.--. .|-.+. +-.+.
T Consensus 102 ~~vL~mNTGaEAvEtA~K-LAR~WgY~~K~ip~~kA~ii~~~GNFhGRTlgA~S~Std~e~~k~~FGPflPnvasGhgf~ 180 (426)
T TIGR01885 102 EKVLPMNTGAEAVETALK-LARKWGYEVKGIPRNKAKIIAASGNFHGRTLGAVSASTDSETSKKGFGPFLPNVASGHGFR 180 (426)
T ss_pred CEEECCCCCHHHHHHHHH-HHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHCCCCHHHHCCCCCCCCCCCCCCCCC
T ss_conf 056045687347999999-9997441357855762389985388733035443202672120067879677433578521
Q ss_pred EECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEE
Q ss_conf 305688147899764310002478607971462157661346----8999998631360898613112223477764011
Q gi|254780486|r 140 AIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLT 215 (381)
Q Consensus 140 ~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~ 215 (381)
..|.+|+++|++.|....+. +++..-+++|.|-.=-|-+.| |+++++||+|||+++|+||+| +| +||||+-+|
T Consensus 181 ~iPYgd~EAl~~aL~~P~~~-GDnVAA~i~EPIQGEAGvvvPp~gYl~~V~~LC~~~nVLfI~DEiQ-TG-lGRTGk~la 257 (426)
T TIGR01885 181 KIPYGDLEALRKALQDPKKT-GDNVAAFILEPIQGEAGVVVPPPGYLPGVRALCKEHNVLFIADEIQ-TG-LGRTGKLLA 257 (426)
T ss_pred CCCCCCHHHHHHHHHCCCCC-CCCEEEEEECCCCCCCCEEECCCCHHHHHHHHHHHCCCEEEEEEEC-CC-CCHHHHHHH
T ss_conf 15588878999997275778-8868999950403544368489635789999865518728982000-38-402545331
Q ss_pred -EEHH--CCCCCCCCCCCCCCCCCEE----EEEECCCCCCCCCC----CCCCCEECCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf -0000--1346521001346565302----67524510010000----12110000135775025789887898862710
Q gi|254780486|r 216 -HIIE--ERNNVIVMHSCSKALGSSG----ALVGSNKIIYDYLI----NYAKPFIYTTSPSPILAVVACEALKLIKRKPA 284 (381)
Q Consensus 216 -~~~~--~~~~~iv~~TlsKa~g~~G----G~i~~~~~ii~~l~----~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~ 284 (381)
+|.+ ++||+++ |+||+|+ | ++|+++.+|+-.|. .|+.+| +.||+.|++++++|++|+++.
T Consensus 258 ~dh~~aev~PDi~l---LGKALsG-Gv~PiSa~la~~dim~vl~PGPF~HGSTf----GGNPLAcavaiAaLeVL~~ek- 328 (426)
T TIGR01885 258 CDHENAEVKPDIVL---LGKALSG-GVYPISAVLADDDIMSVLKPGPFEHGSTF----GGNPLACAVAIAALEVLEEEK- 328 (426)
T ss_pred HHCCCCEECCCCEE---EEHHHCC-CCCCEEEEEECCCEEECCCCCCCCCCCCC----CCCHHHHHHHHHHHHHHHCCC-
T ss_conf 01058820450335---1123458-94622436664640121176486567768----875789999999999874045-
Q ss_pred HHHHHHHHHHHH-HHHHH---CCC----CCCCCCCEEEEEECC----HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEE
Q ss_conf 224789999999-98764---179----789989728999589----799999999999779189862288888887039
Q gi|254780486|r 285 LHKSLLQLINIT-DKIAN---KKI----GFSSQSHIQSIVIGD----NKSCLNIAKNLQKKGFDIRAIRPPTVPINTARL 352 (381)
Q Consensus 285 ~~~~l~~~~~~~-~~~~~---~~~----g~~~~s~I~~v~~gd----~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rl 352 (381)
+-++..++-..+ +++.. .-- ...+..-...|.+.+ ...+..++.+|+++|.++.+.+ +...|
T Consensus 329 L~~~A~~lG~~f~~~L~~l~~~S~dvv~EVRGkGLL~AIe~~~~ka~~~~~w~~Cl~~k~~GLlak~~n------hd~~I 402 (426)
T TIGR01885 329 LAERADQLGDMFLDELKQLARESPDVVKEVRGKGLLIAIEFKENKADEIGAWDVCLRLKENGLLAKPTN------HDKII 402 (426)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCEECCCC------CCCEE
T ss_conf 068898832899999998875076400011567216888850653332646688788520742101335------87068
Q ss_pred EEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 996287899999999999999998
Q gi|254780486|r 353 RISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 353 Ri~v~a~~t~edi~~~~~~l~~v~ 376 (381)
||.|+...|+||++..++++.+++
T Consensus 403 R~aPPL~i~~E~L~~~ie~i~K~~ 426 (426)
T TIGR01885 403 RLAPPLVITKEQLDEVIEIIRKTL 426 (426)
T ss_pred EECCCCCCCHHHHHHHHHHHHHCC
T ss_conf 717885263899999999986049
No 22
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=100.00 E-value=1.4e-37 Score=254.33 Aligned_cols=310 Identities=15% Similarity=0.165 Sum_probs=230.3
Q ss_pred HHHHHHHHHHHHCCCCCCC-----CCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf 9999999998637868872-----24436885899999999840128885167416602456556663168971004542
Q gi|254780486|r 48 LREKILSSLDSKIPIGSGG-----SRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKL 122 (381)
Q Consensus 48 v~~a~~~a~~~~~g~~~~~-----sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~ 122 (381)
+...+.+++. .||-|.+- .|+-....+...+||+.+|+|+|+|+|+++|||+.+|++++.++++|||.|+.|++
T Consensus 13 l~~~a~~a~~-~~gdgysvcd~c~~~ld~~~~P~i~efe~~aAeflG~d~A~~V~Ggt~Gnqa~i~t~c~~GD~VIv~~n 91 (361)
T cd06452 13 LTPEARKALI-EWGDGYSVCDFCRGRLDEIEKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLCEKGDWVVVDGL 91 (361)
T ss_pred CCHHHHHHHH-HHCCCCCHHHHCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEECCC
T ss_conf 8999999999-867864714520565334769988999999998719966999468520899999998479988985575
Q ss_pred CCHHHHHHHHHCCCCCEEECCC-------CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEE
Q ss_conf 0267752666408764030568-------814789976431000247860797146215766134689999986313608
Q gi|254780486|r 123 VHASIREGINSGKAQAIAIPHN-------NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGF 195 (381)
Q Consensus 123 ~HaSi~~g~~ls~a~~~~f~Hn-------D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~ 195 (381)
+|.|.+.|+.+++++.+.++|+ |++++++.+++.....++...+++++.+++|.|..+|+++|.++|++||..
T Consensus 92 aH~S~~~a~~laG~~~~~v~~~~~~~~~i~pe~~~~~Iee~~~e~g~~p~Lilit~~dy~yG~~~dl~~I~~iah~y~iP 171 (361)
T cd06452 92 AHYTSYVAAERAGLNVREVPNTGHPEYHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVP 171 (361)
T ss_pred CHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCC
T ss_conf 12889988886384699956776856651889999999999986189964999966787736631379999999985996
Q ss_pred EEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE--EEEECCCCCCCCCCCCCCC-------EECCCCC-C
Q ss_conf 9861311222347776401100001346521001346565302--6752451001000012110-------0001357-7
Q gi|254780486|r 196 IVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG--ALVGSNKIIYDYLINYAKP-------FIYTTSP-S 265 (381)
Q Consensus 196 LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G--G~i~~~~~ii~~l~~~~~~-------~ifst~l-~ 265 (381)
++|||||+.|.++.+++.+ ..++++++.+|++|+.+ |.+++++++++.+....+- ++.+|+. +
T Consensus 172 vlvD~A~~~g~lpv~a~~~-------gaD~v~~s~hK~~~a~~p~gvL~~~~~~~~~v~R~~~~~~~K~~~~Lg~t~~~~ 244 (361)
T cd06452 172 LLLNGAYTVGRMPVSGKEL-------GADFIVGSGHKSMAASAPIGVLATTEEWADIVFRTSQMFKIKEVELLGCTLRGA 244 (361)
T ss_pred EEECCCCCCCCCCCCHHHC-------CCCEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHCCCCCCC
T ss_conf 8971542247579875450-------796899865655534574378850506788887411011045778746786551
Q ss_pred CC--HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC-------------CCCCEEEEEECC-HHHHHHHHHH
Q ss_conf 50--2578988789886271022478999999998764179789-------------989728999589-7999999999
Q gi|254780486|r 266 PI--LAVVACEALKLIKRKPALHKSLLQLINITDKIANKKIGFS-------------SQSHIQSIVIGD-NKSCLNIAKN 329 (381)
Q Consensus 266 P~--~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~~g~~-------------~~s~I~~v~~gd-~~~a~~~~~~ 329 (381)
|. ++|...++.+.+++-+ .-.++++++.+...+.-|+. -+++.+.+...+ ..+-..+.++
T Consensus 245 ~~~~lmAS~~~~~~~v~~~~----eev~~ar~~~~el~kI~G~~~~ge~p~~~dl~~~dt~~~~~~~~~~~~~G~~L~~~ 320 (361)
T cd06452 245 PLVTLMASFPHVKERVKRWD----EEVEKARWFVAELEKIEGIKQLGEKPKNHDLMFFETPSFDEIAKKHKRRGYFLYSE 320 (361)
T ss_pred HHHHHHCCCHHHHHHHHHHH----HHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEECCCCCEEEEECCCCCCCHHHHH
T ss_conf 79999807299999998777----89999999999984284531215577767745614786324410478650069999
Q ss_pred HHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99779189862288888887039996287899999999999999998
Q gi|254780486|r 330 LQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 330 L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
|.++||...- | +...++-..+...|+|++++++++|+++.
T Consensus 321 L~~rgI~~~~------~-g~t~~~~~~tyG~t~e~i~~l~~a~keI~ 360 (361)
T cd06452 321 LKKRGIHGIK------P-GLTRYFKLSTYGLTWEQVEYVVDAFKEIA 360 (361)
T ss_pred HHHCCCEEEC------C-CCCCEEEEEEECCCHHHHHHHHHHHHHHH
T ss_conf 9876976871------6-85337999995168889999999999975
No 23
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase; InterPro: IPR004639 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway . The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin . The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) . This entry represents glutamate-1-semialdehyde (GSA) aminotransferase (5.4.3.8 from EC), which catalyse a transamination reaction to produce 5-aminoaevulinic acid during the first stage of tetrapyrrole biosynthesis by the C5 pathway , . This enzyme has a high degree of similarity to amino acid transaminases, and is classed as a class III aminotransferase.; GO: 0042286 glutamate-1-semialdehyde 21-aminomutase activity, 0033014 tetrapyrrole biosynthetic process.
Probab=100.00 E-value=1.3e-37 Score=254.55 Aligned_cols=327 Identities=17% Similarity=0.276 Sum_probs=238.9
Q ss_pred HHCCCEEEECCCCEEEECCCCCCCC--CC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH-----HC
Q ss_conf 9759839992897689803446566--77-9889999999999863786887224436885899999999840-----12
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSHDYLA--LS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAAD-----FF 88 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~dYLG--l~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~-----~~ 88 (381)
|++|.+..++||++||||+. +|=- |. .||+|++|+.++++| |++.|.+- |.|-+||+ +-
T Consensus 36 ~g~G~~l~DvDG~~YIDyv~-swGPLILGHahp~v~~Av~e~ler--G~syG~Pt----------E~Ei~lA~~i~~~v~ 102 (434)
T TIGR00713 36 RGKGAYLYDVDGNEYIDYVL-SWGPLILGHAHPKVVEAVKEALER--GTSYGAPT----------EAEILLAKEIISRVP 102 (434)
T ss_pred CCCCCEEEECCCCEEEHHHH-HCCCCCCCCCCHHHHHHHHHHHHH--CCCCCCCC----------HHHHHHHHHHHHHCC
T ss_conf 16767788338880012110-000201178976899999999973--01268998----------899999999986405
Q ss_pred CC--CCEEEECCCCHHHHHHHH---HHCCCCCC-------------CCHHHHCCHHHHH--HHHHCCC-------CCEEE
Q ss_conf 88--851674166024565566---63168971-------------0045420267752--6664087-------64030
Q gi|254780486|r 89 GF--EKMLYFGSGYAANMAILS---TLPQATDL-------------IVYDKLVHASIRE--GINSGKA-------QAIAI 141 (381)
Q Consensus 89 g~--e~al~~~sG~~An~~~i~---~l~~~~d~-------------ii~D~~~HaSi~~--g~~ls~a-------~~~~f 141 (381)
.. |..-++|||+.|-|++|. ++++|..+ ++.++-+=+--.. |.--|-. .....
T Consensus 103 ~~t~e~vRfVnSGTEATMsAvRLARG~TGR~~IiKFeGcYHGh~D~lLv~AGSGaaT~g~CG~P~SpGvP~~~~k~Tl~~ 182 (434)
T TIGR00713 103 SVTEEMVRFVNSGTEATMSAVRLARGFTGRDKIIKFEGCYHGHHDALLVKAGSGAATLGSCGLPTSPGVPEDFAKLTLVL 182 (434)
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHCCCC
T ss_conf 55465168621764889999998631058872788617641012320035452101046887788888701143113404
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEE
Q ss_conf 5688147899764310002478607971462157661346----899999863136089861311222347776401100
Q gi|254780486|r 142 PHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHI 217 (381)
Q Consensus 142 ~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~ 217 (381)
|.||.+.+++.+++. ++....|++|.|-..-|-++| |+.|++||+|||++||+||+- +|+.=..| |.+++
T Consensus 183 PYND~~a~~~~f~~~----G~~iAgvIvEPv~GNmGvvpP~~eFL~~Lr~lt~e~g~LLI~DEV~-TGFRva~~-GAQ~y 256 (434)
T TIGR00713 183 PYNDLEALEEAFEEY----GEEIAGVIVEPVAGNMGVVPPKKEFLEGLRELTEEYGALLIFDEVI-TGFRVALG-GAQEY 256 (434)
T ss_pred CCCCHHHHHHHHHHC----CCCEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCC-CHHHCCHH-HCCHH
T ss_conf 517389999999867----9834378861202576664885223589999998729577550221-01221332-15011
Q ss_pred HHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCC-----CCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 001346521001346565302---67524510010000-----1211000013577502578988789886271022478
Q gi|254780486|r 218 IEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLI-----NYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSL 289 (381)
Q Consensus 218 ~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~-----~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l 289 (381)
+++.||++ ||+|-+|+ | |++.|+++|+|.|- +.+.++ +.||++++|.+++|+.++++++..+++
T Consensus 257 fgV~PDl~---~lGKI~GG-GlP~gA~gGrrEiM~~laP~G~vYQAGTl----sGNPlam~AG~atLk~~~~~~~~Y~~l 328 (434)
T TIGR00713 257 FGVEPDLT---TLGKIIGG-GLPVGAFGGRREIMERLAPEGPVYQAGTL----SGNPLAMAAGLATLKLLDEEKGVYTEL 328 (434)
T ss_pred CCCCCCCE---EECHHHCC-CCCCEEECCCHHHHHHHCCCCCCCCCCCC----CCCHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 37874103---42332337-64510122675688431788774456435----558899999999999853488834899
Q ss_pred HHHHHHHHHHHH---CCCCCC----CCCCEEEEEEC-C-------------HHHHHHHHHHHHHCCEEEEEECCCCCCCC
Q ss_conf 999999998764---179789----98972899958-9-------------79999999999977918986228888888
Q gi|254780486|r 290 LQLINITDKIAN---KKIGFS----SQSHIQSIVIG-D-------------NKSCLNIAKNLQKKGFDIRAIRPPTVPIN 348 (381)
Q Consensus 290 ~~~~~~~~~~~~---~~~g~~----~~s~I~~v~~g-d-------------~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~ 348 (381)
.++.+.+.+... ...+++ .......++++ + .+.=.++.++|+++|||+.|..|-++
T Consensus 329 ~~~~~~L~~g~~e~l~~~gip~~~~~~gSMf~~FFtd~~~V~ny~~A~~SD~e~F~~Ff~~mL~~GVylpPS~FEa~--- 405 (434)
T TIGR00713 329 DELAKRLAEGLSEVLEDKGIPHTVNRVGSMFSLFFTDEEEVTNYADAKKSDTELFAKFFHEMLEKGVYLPPSQFEAC--- 405 (434)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH---
T ss_conf 99999999999999982798589950440045665778898788999886189889999999858887898721155---
Q ss_pred CCEEEEECCCCCCHHHHH----HHHHHHHHHHHHH
Q ss_conf 703999628789999999----9999999998873
Q gi|254780486|r 349 TARLRISITLNVDEPTIV----KLFDILPQIISEG 379 (381)
Q Consensus 349 ~~rlRi~v~a~~t~edi~----~~~~~l~~v~~E~ 379 (381)
.+++.||+|+|| .++++++++++++
T Consensus 406 ------F~S~AH~~E~i~yaq~~ti~a~~~~f~~~ 434 (434)
T TIGR00713 406 ------FISAAHTEEDIEYAQTNTIEAAEEVFAEL 434 (434)
T ss_pred ------HHCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf ------51677772117899999999999998409
No 24
>PTZ00125 ornithine aminotransferase; Provisional
Probab=100.00 E-value=3.5e-36 Score=245.67 Aligned_cols=337 Identities=19% Similarity=0.266 Sum_probs=237.5
Q ss_pred HHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCE
Q ss_conf 975983999289768980344---65667798899999999998637868872244368858999999998401288851
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKM 93 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~a 93 (381)
+++|.|.++.||++||||.|. .-||- .||+|.+|+.++++ +... .++.+ +.+....+|+.++.+.+.+.+
T Consensus 37 rg~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~q~~-~l~~---~~~~~--~~~~~~~a~~~l~~~~g~~~v 109 (415)
T PTZ00125 37 KGKGVFVWDVEGKKYFDFLSAYSAVNQGH-CHPKILEALINQAK-KLTL---SSRAF--YNQKLGEAEKYITNLFGYDKV 109 (415)
T ss_pred EEECCEEEECCCCEEEEECCCHHHHHHCC-CCHHHHHHHHHHHH-HCCC---CCCCC--CCHHHHHHHHHHHHCCCCCEE
T ss_conf 85649899698899878240688634427-97999999999996-5787---76753--458999999999855499889
Q ss_pred EEECCCCHHHHHHHHHHC-----------CCCCCCCHHHHCCHHHHHHHHHCC------------CCCEEECCCCHHHHH
Q ss_conf 674166024565566631-----------689710045420267752666408------------764030568814789
Q gi|254780486|r 94 LYFGSGYAANMAILSTLP-----------QATDLIVYDKLVHASIREGINSGK------------AQAIAIPHNNINSFA 150 (381)
Q Consensus 94 l~~~sG~~An~~~i~~l~-----------~~~d~ii~D~~~HaSi~~g~~ls~------------a~~~~f~HnD~~~Le 150 (381)
++++||..||.+++..-- ++.-+|-.+.--|..-.-...+++ .....++.||++.++
T Consensus 110 ~f~~SGsEA~e~AiklAr~~~~~~~~~~~~r~~ii~~~~~yHG~t~ga~s~~~~~~~~~~~~p~~~~~~~~p~~d~~~l~ 189 (415)
T PTZ00125 110 LFMNTGAEANETAVKFARRWGYAVKGIPENQAKIIFCNGNFSGRTMGAISASDDPKSYNKFGPFVPGFHKVDYNDLEALE 189 (415)
T ss_pred EECCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHH
T ss_conf 95387588999999999898774167778960599973886888445433445743345778888970770467689999
Q ss_pred HHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-EEEHHCCCCCC
Q ss_conf 9764310002478607971462157661346----899999863136089861311222347776401-10000134652
Q gi|254780486|r 151 ENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL-THIIEERNNVI 225 (381)
Q Consensus 151 ~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~-~~~~~~~~~~i 225 (381)
+.+++.. ....|++|.|.+..|.+.| |++++++|++||++||+||++ +| +|++|... .+++++.||++
T Consensus 190 ~~~~~~~-----~iAAviiEPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~-tG-fGRtG~~fa~e~~gv~PDiv 262 (415)
T PTZ00125 190 KLLSKDP-----NVCAFIVEPIQGEAGVIVPDEGYLKQVYSLCKKYNVLLVADEVQ-TG-LGRTGKLLAVDHEGVKPDIV 262 (415)
T ss_pred HHHCCCC-----CEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCE-EC-CCCCCCCCCCCCCCCCCCEE
T ss_conf 9960499-----76899974656878842699999999999999848767645224-16-77567621201789799821
Q ss_pred CCCCCCCCCCCE---EEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-HHH
Q ss_conf 100134656530---2675245100100001211000013577502578988789886271022478999999998-764
Q gi|254780486|r 226 VMHSCSKALGSS---GALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDK-IAN 301 (381)
Q Consensus 226 v~~TlsKa~g~~---GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~-~~~ 301 (381)
||||++|+. =|.+++++++.+.+.....+..| +.+|..|++++++|++++++. +.++.++..+++.+ +..
T Consensus 263 ---~~gKgl~gG~~Plsav~~~~~i~~~~~~~~h~~T~--~gnpla~Aaa~a~L~~i~~~~-l~~~v~~~G~~l~~~L~~ 336 (415)
T PTZ00125 263 ---LLGKALSGGHLPISAVLANDDVMLTIKPGEHGSTY--GGNPLAAAVCKEALEVLSEEK-LAENAQKLGKYFRKGLKK 336 (415)
T ss_pred ---EECCCCCCCCCCCEEEECCHHHHHHCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHH
T ss_conf ---00314468877620353349999632689988899--818999999999999998646-999999999999999998
Q ss_pred -CCCC----CCCCCCEEEEEECC--HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf -1797----89989728999589--7999999999997791898622888888870399962878999999999999999
Q gi|254780486|r 302 -KKIG----FSSQSHIQSIVIGD--NKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQ 374 (381)
Q Consensus 302 -~~~g----~~~~s~I~~v~~gd--~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~ 374 (381)
.+.+ +.+..-+..|.+.+ ...+.++..+++++|+++.+. +...|||+|+...|++|||+++++|++
T Consensus 337 L~~~p~v~~VRG~Gl~~giel~~~~~~~~~~i~~~~~~~Gll~~~~-------g~~vir~~PPL~it~~eid~~l~~l~~ 409 (415)
T PTZ00125 337 LKKSPIVEIVRGKGLLNAIQFDPNVSNVAWDICLKFKENGLLCKPT-------HDDIIRLTPPLTITKEQLDQCLLIIKK 409 (415)
T ss_pred HHCCCCEEEEECCCEEEEEEEECCCCHHHHHHHHHHHHCCEEEECC-------CCCEEEEECCCCCCHHHHHHHHHHHHH
T ss_conf 7469976987007819999985797658999999999599699607-------999899989933899999999999999
Q ss_pred HHHHHC
Q ss_conf 988738
Q gi|254780486|r 375 IISEGN 380 (381)
Q Consensus 375 v~~E~~ 380 (381)
+++++|
T Consensus 410 aL~~l~ 415 (415)
T PTZ00125 410 VLKSFN 415 (415)
T ss_pred HHHHCC
T ss_conf 999619
No 25
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=100.00 E-value=2.1e-36 Score=247.07 Aligned_cols=337 Identities=19% Similarity=0.232 Sum_probs=233.2
Q ss_pred HHCCCEEEECCCCEEEECCC-CCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--CCC
Q ss_conf 97598399928976898034-4656677-9889999999999863786887224436885899999999840128--885
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTS-HDYLALS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG--FEK 92 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s-~dYLGl~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g--~e~ 92 (381)
+++|.+.++.||++||||.| +.-..|. +||+|.+|+.++++ +....+ .. ...++.-.+|.++|++.++ .+.
T Consensus 24 ~~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~-~~~~~~-~~---~~~~~~~~~la~~l~~~~p~~~~~ 98 (413)
T cd00610 24 RAEGAYLYDVDGNRYLDFLSGIGVLNLGHNHPEVVEALKEQLA-KLTHFS-LG---FFYNEPAVELAELLLALTPEGLDK 98 (413)
T ss_pred EEECCEEEECCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHH-HCCCCC-CC---CCCCHHHHHHHHHHHHHCCCCCCE
T ss_conf 8565999979979999967067644657898899999999997-489725-78---668889999999999856998487
Q ss_pred EEEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHHHHHHHHCCC------------CCEEECCC-----------CH
Q ss_conf 16741660245655666---316897100454202677526664087------------64030568-----------81
Q gi|254780486|r 93 MLYFGSGYAANMAILST---LPQATDLIVYDKLVHASIREGINSGKA------------QAIAIPHN-----------NI 146 (381)
Q Consensus 93 al~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi~~g~~ls~a------------~~~~f~Hn-----------D~ 146 (381)
+++++||..||..++.. ..++..+|-.+..-|.+-.-.+.+++. .+...+.| |+
T Consensus 99 v~f~~sGsEA~e~AiklAr~~t~r~~ii~~~~~yHG~t~~als~t~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~ 178 (413)
T cd00610 99 VFFVNSGTEAVEAALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDL 178 (413)
T ss_pred EEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCHHHH
T ss_conf 99818777999999999999739988999868847876633441378322457788889966808987655543227789
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-EEEHHCC
Q ss_conf 47899764310002478607971462157661346----899999863136089861311222347776401-1000013
Q gi|254780486|r 147 NSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL-THIIEER 221 (381)
Q Consensus 147 ~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~-~~~~~~~ 221 (381)
+.+++.+++. +.....|++|.|.+..|.+.| |++++++|++||++||+||++ +| +|++|.+. .+++++.
T Consensus 179 ~~l~~~~~~~----~~~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~-tG-fGRtG~~~a~~~~gv~ 252 (413)
T cd00610 179 EALEEALEEH----PEEVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQ-TG-FGRTGKMFAFEHFGVE 252 (413)
T ss_pred HHHHHHHHHC----CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHEEECCCEEEEEECE-EC-CCCCCCCCHHHHCCCC
T ss_conf 9999999738----9978999997987889987388899788863286058069852020-07-7754543123325817
Q ss_pred CCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 46521001346565302---675245100100001211000013577502578988789886271022478999999998
Q gi|254780486|r 222 NNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDK 298 (381)
Q Consensus 222 ~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~ 298 (381)
||++ ||+|++|+ | |.+++++++.+.+......+-+|-+.+|..|++++++|+++++++ +.+++++..+++.+
T Consensus 253 PDiv---t~gK~lgg-G~Pisav~~~~~i~~~~~~~~~~h~~T~~gnp~~~Aaa~a~L~~i~~e~-l~~~~~~~g~~l~~ 327 (413)
T cd00610 253 PDIV---TLGKGLGG-GLPLGAVLGREEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEEG-LLENAAELGEYLRE 327 (413)
T ss_pred CCEE---EECCCCCC-CCCCEEEEECHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHH
T ss_conf 8756---52334568-8986047775999998633885067788888499999999999984256-99999999999999
Q ss_pred -HHH--CCCCC----CCCCCEEEEEEC--------CHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHH
Q ss_conf -764--17978----998972899958--------979999999999977918986228888888703999628789999
Q gi|254780486|r 299 -IAN--KKIGF----SSQSHIQSIVIG--------DNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEP 363 (381)
Q Consensus 299 -~~~--~~~g~----~~~s~I~~v~~g--------d~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~e 363 (381)
+.. ...++ .+...+..|.+. +...+..+.++++++|+++.+. +...||+.|+..+|++
T Consensus 328 ~L~~l~~~~~~i~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~-------g~~~l~~~Ppl~it~~ 400 (413)
T cd00610 328 RLRELAEKHPLVGDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPS-------GGNVIRLLPPLIITEE 400 (413)
T ss_pred HHHHHHHHCCCCEEEEEECEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEECC-------CCCEEEEECCCCCCHH
T ss_conf 999999748993696432449999993687767758999999999999799489117-------9998999788368999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999998
Q gi|254780486|r 364 TIVKLFDILPQII 376 (381)
Q Consensus 364 di~~~~~~l~~v~ 376 (381)
|||++++++++++
T Consensus 401 eid~~~~~l~~aL 413 (413)
T cd00610 401 EIDEGLDALDEAL 413 (413)
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999999999869
No 26
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-36 Score=247.21 Aligned_cols=336 Identities=18% Similarity=0.275 Sum_probs=242.0
Q ss_pred HHHHHHCCCEEEECCCCEEEECCCC-CCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-
Q ss_conf 9999975983999289768980344-656677-9889999999999863786887224436885899999999840128-
Q gi|254780486|r 13 LQKIKSKGRHRQLLRRQDIWDFTSH-DYLALS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG- 89 (381)
Q Consensus 13 l~~~~~~g~~~~~~~~~~~l~f~s~-dYLGl~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g- 89 (381)
+.-.+++|.+.++.+|++||||.+. .-..|. .||++++++.++.++.|.+ |+++ +++...+|-++|++..+
T Consensus 26 ~~~~~G~G~~v~D~~G~~YlDf~~Giav~~lGH~hP~iv~al~~Q~~kl~h~----sn~~--~~~~~~~la~~L~~~s~~ 99 (404)
T COG4992 26 VVIVRGEGAYVWDQQGREYLDFAAGIAVNNLGHCHPALVEALKEQAEKLWHV----SNLF--YNEPQAELAEKLVELSPF 99 (404)
T ss_pred EEEEECCCCEEECCCCCEEEEECCCEEEECCCCCCHHHHHHHHHHHHHHHHC----CCCC--CCHHHHHHHHHHHHHCCC
T ss_conf 2478546257987998876660355111025778989999999999776211----3133--786999999999962866
Q ss_pred CCCEEEECCCCHHHHHHHHH---HCC---CCCCCCHHHHCCHHHHHHHHHCC------------CCCEEECCCCHHHHHH
Q ss_conf 88516741660245655666---316---89710045420267752666408------------7640305688147899
Q gi|254780486|r 90 FEKMLYFGSGYAANMAILST---LPQ---ATDLIVYDKLVHASIREGINSGK------------AQAIAIPHNNINSFAE 151 (381)
Q Consensus 90 ~e~al~~~sG~~An~~~i~~---l~~---~~d~ii~D~~~HaSi~~g~~ls~------------a~~~~f~HnD~~~Le~ 151 (381)
.+.++++|||..||.++|.. .++ +...|-.+..-|.--.-.+-+++ ..+...+.||++++++
T Consensus 100 ~d~vff~NSGaEA~EaAiKlARk~~~~~~k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ 179 (404)
T COG4992 100 ADRVFFCNSGAEANEAALKLARKYTGDPEKSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEA 179 (404)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCEEEECCCCHHHCCCCCCCCCCCEECCCCCHHHHHH
T ss_conf 66899757838999999999999708888757999747757766233665688422267889999953617899899998
Q ss_pred HHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-EEEHHCCCCCCC
Q ss_conf 764310002478607971462157661346----899999863136089861311222347776401-100001346521
Q gi|254780486|r 152 NINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL-THIIEERNNVIV 226 (381)
Q Consensus 152 ~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~-~~~~~~~~~~iv 226 (381)
.+.. .+.-|++|.|-.-.|-++| |+++++||++||++||+||+| +| +||||+-. ++++++.||++
T Consensus 180 ai~~-------~taAvivEPIQGEgGV~~~~~~fl~~lr~lCd~~g~LLI~DEVQ-tG-~GRTGk~fA~e~~gV~PDI~- 249 (404)
T COG4992 180 AIDE-------DTAAVIVEPIQGEGGVIPAPPEFLKALRELCDEHGALLILDEVQ-TG-LGRTGKLFAYEHYGVEPDIL- 249 (404)
T ss_pred HHCC-------CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCEEEEEECCC-CC-CCCCCHHHHHHHHCCCCCEE-
T ss_conf 7365-------75899982666888987799899999999998719299996431-38-88663178989748887778-
Q ss_pred CCCCCCCCCC---EEEEEECCCCCCCCCC--CCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHH
Q ss_conf 0013465653---0267524510010000--121100001357750257898878988627102247899999999-876
Q gi|254780486|r 227 MHSCSKALGS---SGALVGSNKIIYDYLI--NYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITD-KIA 300 (381)
Q Consensus 227 ~~TlsKa~g~---~GG~i~~~~~ii~~l~--~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~-~~~ 300 (381)
|++|++|. .|+ +++++++.+.+. .|+.+| +.+|..|+++.++|+++.++ .+.++.++...++. ++.
T Consensus 250 --tlaK~LgGG~PigA-~la~~~~~~~~~~G~HgSTf----GGNpLacAv~~a~l~~l~~e-~ll~~v~~~g~~~~~~L~ 321 (404)
T COG4992 250 --TLAKALGGGFPIGA-MLATEEIASAFTPGDHGSTF----GGNPLACAVALAVLEVLLEE-GLLENVREKGEYLLQRLR 321 (404)
T ss_pred --EEECCCCCCCCCEE-EEECHHHHHCCCCCCCCCCC----CCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
T ss_conf --86012458833235-57742666247887656777----86799999999999998003-089999999999999999
Q ss_pred HC--CC----CCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 41--79----7899897289995897999999999997791898622888888870399962878999999999999999
Q gi|254780486|r 301 NK--KI----GFSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQ 374 (381)
Q Consensus 301 ~~--~~----g~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~ 374 (381)
.. .. .+.+..-++.+.+.++..+..+.+.|.++|+++.+- +...|||.|+...|+|||+..+++|++
T Consensus 322 ~l~~~~~~v~~vRG~GLmiGiel~~~~~a~~~~~~~~~~gvL~~~a-------~~~ViR~~PpL~i~~eei~~~~~~l~~ 394 (404)
T COG4992 322 ELKRRYPLVKEVRGRGLMIGIELKEPYRARDIVRALREEGVLVLPA-------GPNVIRFLPPLVITEEEIDEALDALER 394 (404)
T ss_pred HHHHCCCCEEEEECCEEEEEEEECCCCCHHHHHHHHHHCCEEEECC-------CCCEEEECCCCCCCHHHHHHHHHHHHH
T ss_conf 9751277212242150499999447645799999999789699607-------888488458752889999999999999
Q ss_pred HHHHH
Q ss_conf 98873
Q gi|254780486|r 375 IISEG 379 (381)
Q Consensus 375 v~~E~ 379 (381)
+++..
T Consensus 395 al~~~ 399 (404)
T COG4992 395 ALAAA 399 (404)
T ss_pred HHHHH
T ss_conf 99965
No 27
>PRK06149 hypothetical protein; Provisional
Probab=100.00 E-value=2.3e-36 Score=246.85 Aligned_cols=348 Identities=15% Similarity=0.224 Sum_probs=245.8
Q ss_pred HHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCC-CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 999999999759839992897689803446566779-8899999999998637868872244368858999999998401
Q gi|254780486|r 9 YEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSS-STLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADF 87 (381)
Q Consensus 9 ~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~-~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~ 87 (381)
|++-+.-.|++|-|....+||+|||+.+|=- -+.+ ||+|.+|+.+++. +.. ..||.. ++...++-++|+++
T Consensus 565 Y~~Pi~ivRGeg~~L~D~~Gr~YLD~~~~V~-~vGH~hP~v~~A~~~Q~~-~L~---~~s~~~---~~~~~elAerL~~~ 636 (972)
T PRK06149 565 YAAPPQIERGWRNYLIDMQGRSYLDMVNNVT-VLGHGHPRMAAAAARQWS-LLN---TNSRFH---YAAVAEFSERLAAL 636 (972)
T ss_pred CCCCCEEEECCCCEEECCCCCEEEEECCCCC-CCCCCCHHHHHHHHHHHH-HHC---CCCCCC---CHHHHHHHHHHHHH
T ss_conf 6899716860402799689988877047724-456789999999999999-745---176636---51599999999985
Q ss_pred C--CCCCEEEECCCCHHHHHHHH---HHCCCCCCCCHHHHCCHHHHHHHHHCCCC-------------CE--E----E--
Q ss_conf 2--88851674166024565566---63168971004542026775266640876-------------40--3----0--
Q gi|254780486|r 88 F--GFEKMLYFGSGYAANMAILS---TLPQATDLIVYDKLVHASIREGINSGKAQ-------------AI--A----I-- 141 (381)
Q Consensus 88 ~--g~e~al~~~sG~~An~~~i~---~l~~~~d~ii~D~~~HaSi~~g~~ls~a~-------------~~--~----f-- 141 (381)
+ +.+.++++|||..||.++|. ..+++.++|..+.--|..-.-.+-+|... ++ + |
T Consensus 637 ~P~~l~~vfF~nSGsEAnE~AlKlAr~~tGr~~iI~~~~ayHG~T~ga~a~s~~~~~~~~~~~~~p~~v~~~~~P~~yr~ 716 (972)
T PRK06149 637 APDGLDTVFLVNSGSEANDLAIRLAWAASGGRDVLSVLEAYHGWTVATDAVSTSIADNPQALTTRPDWVHPVESPNTFRG 716 (972)
T ss_pred CCCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCC
T ss_conf 76562669850774999999999999962899779996870882678898633434576676789984366068744567
Q ss_pred CCCC-------HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCC
Q ss_conf 5688-------147899764310002478607971462157661346----89999986313608986131122234777
Q gi|254780486|r 142 PHNN-------INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPL 210 (381)
Q Consensus 142 ~HnD-------~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~ 210 (381)
++.+ ..+++..+...... +.....+++|.|++..|.+.+ |++++++|++||.+||.||+| +| +||+
T Consensus 717 ~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~Aa~I~EPI~G~gG~i~~P~gyl~~v~~~c~~~g~LlI~DEVQ-tG-~GRt 793 (972)
T PRK06149 717 KFRGADSAADYLRDVVAQLEDLDAR-GRQLAGFICEPVYGNAGGISLPDGYLRQVYAAVRARGGVCIADEVQ-VG-YGRL 793 (972)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHC-CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC-CC-CCCC
T ss_conf 7788640789999999999999715-8966899995764777873798799999999999749789961322-17-7857
Q ss_pred CCE--EEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCC-CCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 640--1100001346521001346565302---675245100100001211000013-5775025789887898862710
Q gi|254780486|r 211 GKG--LTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTT-SPSPILAVVACEALKLIKRKPA 284 (381)
Q Consensus 211 G~G--~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst-~l~P~~~aaa~aal~~l~~~~~ 284 (381)
|.. .++++++.|+++ |++|++|+ | |.+++++++.+.+.. +++.||| +.+|..|++++++|++++++ .
T Consensus 794 G~~Fwa~e~~gv~PDIv---t~aKglg~-G~PlgAvv~~~eia~~f~~--~g~~~sTfgGnPlacAaalavL~vi~~e-~ 866 (972)
T PRK06149 794 GHYFWGFEQQGVVPDII---TMAKGMGN-GHPLGAVITRREIAEALEA--EGYFFSSTGGSPVSCAIGMAVLDVMREE-K 866 (972)
T ss_pred CCCCCHHHHCCCCCCEE---EECCCCCC-CCCCEEEEECHHHHHHHCC--CCCCCCCCCCCHHHHHHHHHHHHHHHHC-C
T ss_conf 66300445429998779---86455558-8664788974999976526--8860058998989999999999999873-6
Q ss_pred HHHHHHHHHHHHH-HH---HHCC--C-CCCCCCCEEEEEE--------CCHHHHHHHHHHHHHCCEEEEEECCCCCCCCC
Q ss_conf 2247899999999-87---6417--9-7899897289995--------89799999999999779189862288888887
Q gi|254780486|r 285 LHKSLLQLINITD-KI---ANKK--I-GFSSQSHIQSIVI--------GDNKSCLNIAKNLQKKGFDIRAIRPPTVPINT 349 (381)
Q Consensus 285 ~~~~l~~~~~~~~-~~---~~~~--~-g~~~~s~I~~v~~--------gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~ 349 (381)
+.++.++..+++. ++ ..+. + .+.+..-++.|.+ +.++.+..++++|+++||++.+.. ...
T Consensus 867 L~~na~~~G~~l~~~L~~L~~~~p~IgdVRG~GLm~GiElV~d~~t~~Pa~~~~~~i~~~~~e~Gil~~~~G-----~~~ 941 (972)
T PRK06149 867 LQENARRVGDHLKARLEALVDRHPLAGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTG-----DHL 941 (972)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEECCC-----CCC
T ss_conf 999999999999999999986199489862267289999701667689888999999999997895894278-----988
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 039996287899999999999999998873
Q gi|254780486|r 350 ARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 350 ~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
..|||.++...|+||+|.++++|+++++|+
T Consensus 942 nVlki~PPL~i~~e~~D~~l~~l~~vL~E~ 971 (972)
T PRK06149 942 NILKIKPPLCTDRESADFFVDMLDRVLTEG 971 (972)
T ss_pred CEEEECCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 879980894676999999999999998554
No 28
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=100.00 E-value=7.5e-36 Score=243.60 Aligned_cols=336 Identities=16% Similarity=0.203 Sum_probs=237.3
Q ss_pred HHHHHCCCEEEECCCCEEEECCC---CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 99997598399928976898034---465667798899999999998637868872244368858999999998401288
Q gi|254780486|r 14 QKIKSKGRHRQLLRRQDIWDFTS---HDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF 90 (381)
Q Consensus 14 ~~~~~~g~~~~~~~~~~~l~f~s---~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~ 90 (381)
.-.+++|.|.+..||++||||.| +.-||- +||+|.+|+.+++++.+.++ .. + .++...+|-++|.+....
T Consensus 25 vi~ra~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~I~~Ai~~Q~~~l~~~~---~~-~--~~~~~~~lae~L~~~~~~ 97 (403)
T PRK05093 25 IPVRGEGSRVWDQQGREYIDFAGGIAVTALGH-CHPALVKALKEQGEKLWHIS---NV-F--TNEPALRLAKKLVDATFA 97 (403)
T ss_pred CEEEEECCEEEECCCCEEEECCCCHHHCEECC-CCHHHHHHHHHHHHHCCCCC---CC-C--CCHHHHHHHHHHHHCCCC
T ss_conf 08985629899799799999550888503289-97999999999987557775---74-1--488999999998641687
Q ss_pred CCEEEECCCCHHHHHHHHHH---C------CCCCCCCHHHHCCHHHHHHHHHCCC------------CCEEECCCCHHHH
Q ss_conf 85167416602456556663---1------6897100454202677526664087------------6403056881478
Q gi|254780486|r 91 EKMLYFGSGYAANMAILSTL---P------QATDLIVYDKLVHASIREGINSGKA------------QAIAIPHNNINSF 149 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~l---~------~~~d~ii~D~~~HaSi~~g~~ls~a------------~~~~f~HnD~~~L 149 (381)
+.+++.+||..||.+++..- . ++..+|-.+.--|.+.....-+++. .+...+.||++.+
T Consensus 98 drv~f~~SGSEAvE~AiklAr~~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~~g~~~~~~~~~p~~~~~~~~p~~d~~~l 177 (403)
T PRK05093 98 ERVFFANSGAEANEAALKLARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDLAAL 177 (403)
T ss_pred CEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCCHHCCCCCCCCCCCEECCCCCHHHH
T ss_conf 75998386778999999999999997289987547777588688836877625880110277899977565563368888
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCE-EEEEHHCCCCC
Q ss_conf 99764310002478607971462157661346----89999986313608986131122234777640-11000013465
Q gi|254780486|r 150 AENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKG-LTHIIEERNNV 224 (381)
Q Consensus 150 e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G-~~~~~~~~~~~ 224 (381)
++.+.. ...-|++|.|.+..|.+.| |++++++|++||++||+||++ +| +|++|.. .++++++.||+
T Consensus 178 ~~~~~~-------~iaAviiEPi~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~-tG-~GRtG~~fa~e~~gv~PDi 248 (403)
T PRK05093 178 KAVIDD-------KTCAVVVEPIQGEGGVIPATPEFLQGLRELCDKHNALLIFDEVQ-TG-MGRTGDLYAYMHYGVTPDI 248 (403)
T ss_pred HHCCCC-------CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEE-EC-CCCCCCCCCCCCCCCCCCE
T ss_conf 603377-------44799995766789975899999999998630168379860134-26-8877775222368989988
Q ss_pred CCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-H-
Q ss_conf 21001346565302---675245100100001211000013577502578988789886271022478999999998-7-
Q gi|254780486|r 225 IVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDK-I- 299 (381)
Q Consensus 225 iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~-~- 299 (381)
+ |+||++|+ | |.+++++++.+.+.....++.| +.+|..|++++++|+++++++ +.++.++..+++.. +
T Consensus 249 v---~~gKglgg-G~Plsav~~~~~i~~~~~~~~~g~T~--~g~pla~aaala~L~~i~~~~-l~~~a~~~G~~l~~~L~ 321 (403)
T PRK05093 249 L---TSAKALGG-GFPIGAMLTTAEIASHFKVGTHGSTY--GGNPLACAVAEAVFDIINTPE-VLEGVKAREQRFVDGLQ 321 (403)
T ss_pred E---EECCCCCC-CCCEEEEEECHHHHHHCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHH
T ss_conf 9---97300158-86427998728878650787726589--858999999999999996344-99999999999999999
Q ss_pred --HHCC---CCCCCCCCEEEEEECC--HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf --6417---9789989728999589--79999999999977918986228888888703999628789999999999999
Q gi|254780486|r 300 --ANKK---IGFSSQSHIQSIVIGD--NKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDIL 372 (381)
Q Consensus 300 --~~~~---~g~~~~s~I~~v~~gd--~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l 372 (381)
..+. ..+.+...+..+.+.+ ...+.++...++++|+++.+ .|...|||.|+..+|++|||+++++|
T Consensus 322 ~l~~~~~~i~~VRG~Glm~giel~~~~~~~a~~i~~~~~~~Gll~~~-------~g~n~irl~PPL~it~~eid~~l~~l 394 (403)
T PRK05093 322 KINEKYGVFSEIRGKGLLIGAELNEQYKGRARDFLYAAAEEGVMVLV-------AGPDVLRFAPSLVIPDADIDEGLARF 394 (403)
T ss_pred HHHHHCCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCCEEEC-------CCCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 99862898266654126999996587521699999999968928952-------79997999788448999999999999
Q ss_pred HHHHHHH
Q ss_conf 9998873
Q gi|254780486|r 373 PQIISEG 379 (381)
Q Consensus 373 ~~v~~E~ 379 (381)
+++++|.
T Consensus 395 ~~al~eV 401 (403)
T PRK05093 395 EKAVAKV 401 (403)
T ss_pred HHHHHHH
T ss_conf 9999998
No 29
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=7.8e-36 Score=243.50 Aligned_cols=334 Identities=20% Similarity=0.247 Sum_probs=236.8
Q ss_pred HHHHCCCEEEECCCCEEEECCCCCC---CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 9997598399928976898034465---6677988999999999986378688722443688589999999984012888
Q gi|254780486|r 15 KIKSKGRHRQLLRRQDIWDFTSHDY---LALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE 91 (381)
Q Consensus 15 ~~~~~g~~~~~~~~~~~l~f~s~dY---LGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e 91 (381)
-.+++|.|.++.||++||||.|.-. ||- +||+|.+|+.++++ +... .|.++ .++...+|-++|++..+.+
T Consensus 25 i~ra~G~~l~D~dG~~ylD~~~g~~~~~lGH-~~p~i~~Ai~~Q~~-~l~h---~~~~~--~~~~~~~lae~L~~~~~~~ 97 (398)
T PRK02627 25 FVRGEGCWLWDDDGKEYLDFLAGIAVNSLGH-AHPKLVEAIQEQAA-KLIH---TSNLY--YIPPQEELAEKLVELSGMD 97 (398)
T ss_pred EEEEECCEEEECCCCEEEECCCCHHHCCCCC-CCHHHHHHHHHHHH-HCCC---CCCCC--CCHHHHHHHHHHHHHCCCC
T ss_conf 8997628899698899998671787494278-98999999999998-5678---66654--6708999999997524998
Q ss_pred CEEEECCCCHHHHHHHHHH---------CCCCCCCCHHHHCCHHHHHHHHHCCC------------CCEEECCCCHHHHH
Q ss_conf 5167416602456556663---------16897100454202677526664087------------64030568814789
Q gi|254780486|r 92 KMLYFGSGYAANMAILSTL---------PQATDLIVYDKLVHASIREGINSGKA------------QAIAIPHNNINSFA 150 (381)
Q Consensus 92 ~al~~~sG~~An~~~i~~l---------~~~~d~ii~D~~~HaSi~~g~~ls~a------------~~~~f~HnD~~~Le 150 (381)
.+++.+||..||.+++..- .++..+|-.+..-|..-.-+..+++- .+..++.||+++++
T Consensus 98 ~v~f~~sGseAvE~AiKlAr~y~~~~~~~~r~~ii~~~~syHG~T~ga~s~tg~~~~~~~~~p~~~~~~~~p~~d~~~l~ 177 (398)
T PRK02627 98 KVFFCNSGAEANEAAIKLARKYGHTKGGIEKPEIITAENSFHGRTLATLSATGQPKYQKGFEPLVPGFIYVPFNDIEALE 177 (398)
T ss_pred EEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHH
T ss_conf 79982877999999999999998864788886799953786999751001378822236767888880562477299999
Q ss_pred HHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-EEEHHCCCCCC
Q ss_conf 9764310002478607971462157661346----899999863136089861311222347776401-10000134652
Q gi|254780486|r 151 ENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL-THIIEERNNVI 225 (381)
Q Consensus 151 ~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~-~~~~~~~~~~i 225 (381)
+.+.. +....|++|.|.+..|.+.| +++++++|++||++||+||++ +| +|++|+.. .+++++.||++
T Consensus 178 ~~~~~------~~iAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~-tG-fGRtG~~fa~e~~gv~PDiv 249 (398)
T PRK02627 178 AAINN------PRTAAVLLEPIQGEGGVNPADKEYLQALRELCDENNILLILDEVQ-TG-MGRTGKLFAYQHYGIEPDIM 249 (398)
T ss_pred HHHCC------CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCC-CC-CCCCCCCHHHHCCCCCCCEE
T ss_conf 98458------987999982788888986588889999999986507407753000-17-78556510433269788857
Q ss_pred CCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHHH
Q ss_conf 1001346565302---67524510010000121100001357750257898878988627102247899999999-8764
Q gi|254780486|r 226 VMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITD-KIAN 301 (381)
Q Consensus 226 v~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~-~~~~ 301 (381)
||+|++|+ | |.+++++++.+.+..-..+. |-+.+|..|++++++|+++++++ +.++.++..+++. ++..
T Consensus 250 ---~~gKgl~g-G~Plsav~~~~~i~~~~~~g~h~~--T~~gnpla~aaa~a~L~~i~~~~-l~~~~~~~g~~l~~~L~~ 322 (398)
T PRK02627 250 ---TLAKGLGG-GVPIGAVLAKGKAADVFTPGDHGS--TFGGNPLACAAALAVLDIIEEEG-LLENAAERGEYLRAGLRE 322 (398)
T ss_pred ---EECCCCCC-CCCCCCEECCHHHHHHCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHH
T ss_conf ---76000248-898712431699996367998788--89999899999999999998648-999999999999999999
Q ss_pred --CCCC----CCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf --1797----8998972899958979999999999977918986228888888703999628789999999999999999
Q gi|254780486|r 302 --KKIG----FSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 302 --~~~g----~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
...+ +.+...+..|.+..+ +.++.++++++|+++.+. +...|||.|+..+|++|||+++++|+++
T Consensus 323 l~~~~~~v~~vRG~Gl~~giel~~~--~~~~~~~~~~~Gll~~~~-------g~~~ir~~PPL~it~~eid~~~~~l~~a 393 (398)
T PRK02627 323 LLEKYPIIKEVRGLGLMIGIELKRP--AKELVKKALEKGLLINVT-------GDNVLRLLPPLIISKEEIDELVDRLDEV 393 (398)
T ss_pred HHHHCCCEEEEEECCEEEEEEECCC--HHHHHHHHHHCCCEEEEC-------CCCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 9971998367732257999996787--999999999789789507-------9998999889208999999999999999
Q ss_pred HHHH
Q ss_conf 8873
Q gi|254780486|r 376 ISEG 379 (381)
Q Consensus 376 ~~E~ 379 (381)
++|+
T Consensus 394 l~ev 397 (398)
T PRK02627 394 LKEL 397 (398)
T ss_pred HHHH
T ss_conf 9986
No 30
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=8.5e-36 Score=243.27 Aligned_cols=335 Identities=15% Similarity=0.232 Sum_probs=232.8
Q ss_pred HHHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCC
Q ss_conf 9975983999289768980344---656677988999999999986378688722443688589999999984012-888
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF-GFE 91 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~-g~e 91 (381)
.+++|.|.++.||++||||.+. .-||- +||+|.+|+.+++++ ++. ++..++.-.+|-++|++.+ +.+
T Consensus 40 ~~g~G~~l~D~dG~~yiD~~~g~g~~~lGh-~~p~v~~Ai~~q~~~--g~~------~~~~~~~~~~lAe~l~~~~p~~~ 110 (429)
T PRK12389 40 ERGKGAYFYDVDGNKYIDYLAAYGPIITGH-AHPHITKAIQTAAEN--GVL------YGTPTELEIEFAKMLKEAIPSLE 110 (429)
T ss_pred EEEECCEEEECCCCEEEECCHHHHHHCCCC-CCHHHHHHHHHHHHH--CCC------CCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 960439899799899988322166540038-989999999999823--885------77998999999999998578876
Q ss_pred CEEEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHH----HH-H-------HHHC-C------CCCEEECCCCHHHH
Q ss_conf 516741660245655666---316897100454202677----52-6-------6640-8------76403056881478
Q gi|254780486|r 92 KMLYFGSGYAANMAILST---LPQATDLIVYDKLVHASI----RE-G-------INSG-K------AQAIAIPHNNINSF 149 (381)
Q Consensus 92 ~al~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi----~~-g-------~~ls-~------a~~~~f~HnD~~~L 149 (381)
...+++||..||..++.. .+++.-+|-.+..-|.+- .. | ...+ + .....++.||++.+
T Consensus 111 ~v~F~~sGsEA~e~AiklAR~~tgr~kii~~~~~yHG~t~~~l~~~~~~~~~~~~p~~~g~p~~~~~~~~~~p~nd~~~l 190 (429)
T PRK12389 111 KVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVPESIAQEVITVPFNDIESY 190 (429)
T ss_pred EEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHH
T ss_conf 69862684289999999999834999654114575998543223136885346898767887655565253078999999
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCC-EEEEEHHCCCCC
Q ss_conf 99764310002478607971462157661346----8999998631360898613112223477764-011000013465
Q gi|254780486|r 150 AENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGK-GLTHIIEERNNV 224 (381)
Q Consensus 150 e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~-G~~~~~~~~~~~ 224 (381)
++.++++. .....|++|.|.+..|.+.| |+++++||++||++||+||++ +|+ ++|. |.++++++.||+
T Consensus 191 ~~~l~~~~----~~iAavI~EPi~g~~G~i~p~~~yl~~lr~lc~~~giLLI~DEV~-TGf--R~g~~~a~~~~gV~PDi 263 (429)
T PRK12389 191 KEALDKWG----DEVAAVLVEPIVGNFGIVEPKPGFLEEVNELAHEAGALVIYDEVI-TAF--RFMYGGAQDLLGVIPDL 263 (429)
T ss_pred HHHHHHCC----CCEEEEEEECCCCCCCEECCCHHHHHHHHHHHHHCCCEEEEECCC-CCC--CCCCCCHHHCCCCCCCH
T ss_conf 99998458----966899960223678801699899999999999719889996551-031--56667076553899971
Q ss_pred CCCCCCCCCCCC--EEEEEECCCCCCCCCCCCCCCEEC-CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-HH
Q ss_conf 210013465653--026752451001000012110000-13577502578988789886271022478999999998-76
Q gi|254780486|r 225 IVMHSCSKALGS--SGALVGSNKIIYDYLINYAKPFIY-TTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDK-IA 300 (381)
Q Consensus 225 iv~~TlsKa~g~--~GG~i~~~~~ii~~l~~~~~~~if-st~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~-~~ 300 (381)
+ ||+|++|+ .-|.+++++++++.+...++.+.. |-+.+|+.++|++++|++++++ .+.+++.+..+++.+ +.
T Consensus 264 ~---t~gK~lggG~Pi~av~g~~eim~~~~~~g~~~~~gTf~gnpla~AAalA~L~~l~~~-~l~~~~~~~G~~l~~gl~ 339 (429)
T PRK12389 264 T---ALGKIIGGGLPIGAYGGRQDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQE-GVYEKLDELGAMLEEGIL 339 (429)
T ss_pred H---HEHHHCCCCCCEEEEEEHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHH
T ss_conf 0---010322798644887677999987315798502588886889999999999999716-899999999999999999
Q ss_pred --HCCCCCC----CCCCEEEEEEC-------------CHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCC
Q ss_conf --4179789----98972899958-------------9799999999999779189862288888887039996287899
Q gi|254780486|r 301 --NKKIGFS----SQSHIQSIVIG-------------DNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVD 361 (381)
Q Consensus 301 --~~~~g~~----~~s~I~~v~~g-------------d~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t 361 (381)
....+++ .......+++. |......+...|+++||++.|..+ -+..++..||
T Consensus 340 ~l~~~~~~~~~v~~~g~~~~i~f~~~~v~~~~~~~~~~~~~~~~~~~~ml~~Gv~~~p~~~---------~~~~ls~~hT 410 (429)
T PRK12389 340 KLAEKHNITITINRLKGALTVYFTDEKVTDYDQAERSDGEAFGKFFKLMLNQGINLAPSKY---------EAWFLTTEHT 410 (429)
T ss_pred HHHHHCCCCEEEEECCCEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC---------CCCCCCCCCC
T ss_conf 9998779987994148568999458988898998615799999999999978864568677---------7741646789
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999998873
Q gi|254780486|r 362 EPTIVKLFDILPQIISEG 379 (381)
Q Consensus 362 ~edi~~~~~~l~~v~~E~ 379 (381)
++|||+++++++++++|+
T Consensus 411 e~dId~~l~a~d~al~~l 428 (429)
T PRK12389 411 EEDIEETIKAVDRAFAQM 428 (429)
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999975
No 31
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=7.3e-36 Score=243.69 Aligned_cols=335 Identities=14% Similarity=0.229 Sum_probs=230.6
Q ss_pred HHHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCC
Q ss_conf 9975983999289768980344---656677988999999999986378688722443688589999999984012-888
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF-GFE 91 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~-g~e 91 (381)
.+++|.+.++.||++||||.+. .-||- +||+|.+|+.+++++ ++.. .-.++.-.+|-++|++.+ +.+
T Consensus 39 ~~g~G~~v~D~dG~~YlD~~~g~~~~~lGH-~~p~v~~Ai~~q~~~--~~~~------~~~~~~~~~lAe~l~~~~p~~~ 109 (429)
T PRK00062 39 KRAKGAYLYDVDGNEYIDYVLSWGPMILGH-AHPAVVEAVIEAAEK--GLSF------GAPTELEVKLAELVIERVPSVE 109 (429)
T ss_pred EEEECCEEEECCCCEEEECCCCHHHCCCCC-CCHHHHHHHHHHHHH--CCCC------CCCCHHHHHHHHHHHHHCCCCC
T ss_conf 970349899699999988330766500189-979999999999863--5766------6997899999999985589877
Q ss_pred CEEEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHH----H--------HHHHHC-------CCCCEEECCCCHHHH
Q ss_conf 516741660245655666---316897100454202677----5--------266640-------876403056881478
Q gi|254780486|r 92 KMLYFGSGYAANMAILST---LPQATDLIVYDKLVHASI----R--------EGINSG-------KAQAIAIPHNNINSF 149 (381)
Q Consensus 92 ~al~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi----~--------~g~~ls-------~a~~~~f~HnD~~~L 149 (381)
.+.+++||..||..++.. .+++..+|-.+..-|... . .|...+ ....+.++.||++.+
T Consensus 110 ~v~f~~sGsEAve~AiklAR~~tgr~~ii~~~g~YHG~~d~~l~~~gs~~~~~~~p~~~g~p~~~~~~~~~~~~nd~~~~ 189 (429)
T PRK00062 110 MVRMVNSGTEATMSAIRLARGFTGRDKIIKFEGCYHGHSDSLLVKAGSGVATLGLPDSPGVPADFAKNTLTAPYNDLEAV 189 (429)
T ss_pred EEEEECCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCHHHH
T ss_conf 79871876999999999997611887621114656688620565348975446789988997644475263057778888
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCE-EEEEHHCCCCC
Q ss_conf 99764310002478607971462157661346----89999986313608986131122234777640-11000013465
Q gi|254780486|r 150 AENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKG-LTHIIEERNNV 224 (381)
Q Consensus 150 e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G-~~~~~~~~~~~ 224 (381)
++.++++ +.....|++|.|.+..|.+.| |+++++||++||++||+||++ +|+ ++|++ .++++++.||+
T Consensus 190 ~~~l~~~----~~~iAAvivEPi~g~~G~i~p~~~yl~~lr~lc~~~giLlI~DEV~-tGf--RtG~~~a~e~~gv~PDi 262 (429)
T PRK00062 190 KAAFEEY----GDEIACVIVEPVAGNMGCVPPLPGFLEGLRELTDENGALLIFDEVM-TGF--RVAYGGAQGYYGVTPDL 262 (429)
T ss_pred HHHHHHC----CCCEEEEEEEEECCCCCEEECCHHHHHHHHHHHCCCCEEEEEECCC-CCE--ECCCCHHHCCCCCCCCE
T ss_conf 9999856----8865699974323778614488899999999960466479997142-570--05764354178998968
Q ss_pred CCCCCCCCCCCC--EEEEEECCCCCCCCCCCCCCCEE-CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-HH
Q ss_conf 210013465653--02675245100100001211000-013577502578988789886271022478999999998-76
Q gi|254780486|r 225 IVMHSCSKALGS--SGALVGSNKIIYDYLINYAKPFI-YTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDK-IA 300 (381)
Q Consensus 225 iv~~TlsKa~g~--~GG~i~~~~~ii~~l~~~~~~~i-fst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~-~~ 300 (381)
+ ||+|++|. --|.+++++++++.+...+..|. .|-+.+|..++|++++|++++++ .+.+++.+..+++.+ +.
T Consensus 263 ~---t~gK~lggG~Pi~av~~~~eim~~~~~~g~~~~~gTf~gnpla~AAa~a~L~~l~~~-~l~~~~~~~G~~l~~~l~ 338 (429)
T PRK00062 263 T---TLGKVIGGGLPVGAFGGRREIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLRLLDQE-GVYETLDALTDRLAEGLK 338 (429)
T ss_pred E---EECCCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHH
T ss_conf 9---963234798753788677999986375898412587888879999999999999735-799999999999999999
Q ss_pred --HCCCCC----CCCCCEEEEEEC-------------CHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCC
Q ss_conf --417978----998972899958-------------9799999999999779189862288888887039996287899
Q gi|254780486|r 301 --NKKIGF----SSQSHIQSIVIG-------------DNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVD 361 (381)
Q Consensus 301 --~~~~g~----~~~s~I~~v~~g-------------d~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t 361 (381)
....++ .+...+..|.+. |......+...|+++||++.+-.+ -...++..||
T Consensus 339 ~~~~~~~~~~~v~G~G~m~~i~f~~~~~~~~~~~~~~d~~~~~~~~~~m~~~Gv~~~p~~~---------~~~~ls~aht 409 (429)
T PRK00062 339 EAAEKAGIPLVVNRVGSMFGIFFTDEPVTNYEDAKASDTERFARFFHAMLEEGVYLAPSQF---------EAGFVSTAHT 409 (429)
T ss_pred HHHHHCCCCEEEEEECCEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCC---------CCCEEECCCC
T ss_conf 9998779987999657478999648988898998644299999999999978864478642---------4711033589
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999998873
Q gi|254780486|r 362 EPTIVKLFDILPQIISEG 379 (381)
Q Consensus 362 ~edi~~~~~~l~~v~~E~ 379 (381)
++|||+++++++++++++
T Consensus 410 ~~did~~l~a~~~al~~l 427 (429)
T PRK00062 410 DEDIEKTLAAAREAFAAL 427 (429)
T ss_pred HHHHHHHHHHHHHHHHHH
T ss_conf 999999999999999998
No 32
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=2.3e-35 Score=240.61 Aligned_cols=346 Identities=16% Similarity=0.198 Sum_probs=241.3
Q ss_pred HHHCC-CEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--
Q ss_conf 99759-83999289768980344---6566779889999999999863786887224436885899999999840128--
Q gi|254780486|r 16 IKSKG-RHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG-- 89 (381)
Q Consensus 16 ~~~~g-~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g-- 89 (381)
|+.+| .|.++.+|++||||.|. .-||- +||+|.+|+.++++ +..+.+ + .+ .++...+|.++|+++..
T Consensus 77 ~~~~~~~~L~D~~G~rYLD~~sG~~~~~lGH-~~P~I~eAv~~Ql~-~~~~~s--~-~~--~~p~~~~LAe~L~~~~P~~ 149 (468)
T PRK11522 77 WQAGGLNTLVDTQGQEFIDCLGGFGIFNVGH-RNPVVVSAVQNQLA-KQPLHS--Q-EL--LDPLRAMLAKTLAALTPGK 149 (468)
T ss_pred EECCCCCEEEECCCCEEEECCHHHHHCCCCC-CCHHHHHHHHHHHH-HCCCCC--C-CC--CCHHHHHHHHHHHHHCCCC
T ss_conf 9659878799699998777457699712677-99899999999985-357512--7-72--7669999999999748888
Q ss_pred CCCEEEECCCCHHHHHHHHHH------CCCCCCCCHHHHCCHHHHHHHHHCCC------------CCEEECCCCHHHHHH
Q ss_conf 885167416602456556663------16897100454202677526664087------------640305688147899
Q gi|254780486|r 90 FEKMLYFGSGYAANMAILSTL------PQATDLIVYDKLVHASIREGINSGKA------------QAIAIPHNNINSFAE 151 (381)
Q Consensus 90 ~e~al~~~sG~~An~~~i~~l------~~~~d~ii~D~~~HaSi~~g~~ls~a------------~~~~f~HnD~~~Le~ 151 (381)
.+.+++++||..||.+++..- .++..+|-.+..-|..-.-++-+++- .++..+.+|.+++++
T Consensus 150 l~~vFF~nSGSEAvE~AiKlAr~y~~~~Gr~~IIs~~~sYHG~T~galS~tg~~~~~~~f~pl~p~~~~vp~~d~~~~~~ 229 (468)
T PRK11522 150 LKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRT 229 (468)
T ss_pred CCEEEECCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHEECCCHHCCCCCCCCCCCCEECCCCCHHHHHH
T ss_conf 89797379728999999999999777409918999717867764222031276210257778999845637899999999
Q ss_pred HHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCE-EEEEHHCCCCCCC
Q ss_conf 764310002478607971462157661346----89999986313608986131122234777640-1100001346521
Q gi|254780486|r 152 NINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKG-LTHIIEERNNVIV 226 (381)
Q Consensus 152 ~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G-~~~~~~~~~~~iv 226 (381)
.+.+.... ++....|++|.|..-.|.+.| |+++++||++||++||+||++ +| +|++|+. .++++++.|+++
T Consensus 230 ~~~~~~~~-~~~vAAvIvEPIqG~gGv~~pp~~yl~~lr~lc~~~giLLI~DEVq-TG-fGRTG~~fa~e~~gV~PDiv- 305 (468)
T PRK11522 230 ALSECKKT-GDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQ-TG-MGRTGKMFACEHENVQPDIL- 305 (468)
T ss_pred HHHHHHHC-CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEECCCCC-CC-CCCCCCCCEEECCCCCCCEE-
T ss_conf 99986514-8968999997776778982699899999999875380788226412-27-88657851452367898889-
Q ss_pred CCCCCCCCCCE---EEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----HH
Q ss_conf 00134656530---267524510010000121100001357750257898878988627102247899999999----87
Q gi|254780486|r 227 MHSCSKALGSS---GALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITD----KI 299 (381)
Q Consensus 227 ~~TlsKa~g~~---GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~----~~ 299 (381)
||+|++|+. -|.+++++++.+.+......+-+|-+.+|..|++++++|+++++++ +.++.++..+++. ++
T Consensus 306 --t~aKgLggG~~Pigav~~~~~i~~~~~~~~~~hg~Tf~GnPlacAaala~L~ii~~e~-l~~~a~~~G~~L~~~L~~l 382 (468)
T PRK11522 306 --CLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQN-LPAQAEQKGDMLLDGFRQL 382 (468)
T ss_pred --EECCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHH
T ss_conf --9615555787750589762999999851777446676799799999999999998645-9999999999999999999
Q ss_pred HHCC---C-CCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 6417---9-78998972899958979999999999977918986228888888703999628789999999999999999
Q gi|254780486|r 300 ANKK---I-GFSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 300 ~~~~---~-g~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
.... + .+.+..-+..|.+.++..+..+.++++++|+++.... .+...|||.|+...|++|||+++++|+++
T Consensus 383 ~~~~p~~i~dVRG~GLm~giel~~~~~~~~v~~~~~~~Gvlv~~~~-----~~~~~lr~~PPL~It~eeid~~l~~l~~a 457 (468)
T PRK11522 383 AREYPDLVQEARGKGMLMAIEFVDNEIGYNFASEMFRQRVLVAGTL-----NNAKTIRIEPPLTLTIEQCEQVIKAARKA 457 (468)
T ss_pred HHHCCCCEEEEEECCEEEEEEECCCCHHHHHHHHHHHCCEEEEECC-----CCCCEEEEECCCCCCHHHHHHHHHHHHHH
T ss_conf 8768671125100316999995785008999999997891998748-----99988999599657999999999999999
Q ss_pred HHHHC
Q ss_conf 88738
Q gi|254780486|r 376 ISEGN 380 (381)
Q Consensus 376 ~~E~~ 380 (381)
++|++
T Consensus 458 L~~l~ 462 (468)
T PRK11522 458 LAAMR 462 (468)
T ss_pred HHHHH
T ss_conf 99997
No 33
>PRK06148 hypothetical protein; Provisional
Probab=100.00 E-value=8.3e-36 Score=243.34 Aligned_cols=348 Identities=18% Similarity=0.262 Sum_probs=241.6
Q ss_pred HHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 99999999975983999289768980344656677-98899999999998637868872244368858999999998401
Q gi|254780486|r 9 YEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADF 87 (381)
Q Consensus 9 ~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~ 87 (381)
|++-+.-.|++|-|....+|++|||+.+| -=.+. .||+|.+++.+++. +.. ..+|.. ++...++-++|++.
T Consensus 606 y~~Pi~ivRGeG~yL~D~~Gr~YLD~~~n-V~~vGH~hP~v~~ai~~Q~~-~L~---t~t~y~---~~~~~~lAerL~~~ 677 (1015)
T PRK06148 606 YSDPIKFVRGDGVWLIDNRGRAYLDCFNN-VCHVGHAHPRVVEAAARQAA-RLN---TNTRYL---HDAIVAYAERLTAT 677 (1015)
T ss_pred CCCCCEEEECCEEEEECCCCCEEEECCCC-CCCCCCCCHHHHHHHHHHHH-HHC---CCCCCC---CCHHHHHHHHHHHH
T ss_conf 78997687603537996899877761467-55435579899999999997-624---266656---83699999999984
Q ss_pred C--CCCCEEEECCCCHHHHHHHH---HHCCCCCCCCHHHHCCHHHHHHHHHCCCC------------CE--E------EC
Q ss_conf 2--88851674166024565566---63168971004542026775266640876------------40--3------05
Q gi|254780486|r 88 F--GFEKMLYFGSGYAANMAILS---TLPQATDLIVYDKLVHASIREGINSGKAQ------------AI--A------IP 142 (381)
Q Consensus 88 ~--g~e~al~~~sG~~An~~~i~---~l~~~~d~ii~D~~~HaSi~~g~~ls~a~------------~~--~------f~ 142 (381)
+ +.+.++++|||..||.++|. ..+++..+|..+.--|..-.-.+-+++-+ ++ . .+
T Consensus 678 ~P~~l~~vfF~NSGSEAnE~AiKlAr~~tgr~~iI~~~~aYHG~T~gals~s~~~~~~~~g~~~~~~v~~~~~P~~yr~~ 757 (1015)
T PRK06148 678 LPEGLTVASFVNSGSEANSLALRLARAHTGARDAIVLDWAYHGTTQELIDLSPYKFKRKGGKGRPDHVEEAEVPDSYRAP 757 (1015)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCC
T ss_conf 77776557630773889999999999860899748860355686366776367745567788999853778899765677
Q ss_pred CC--C-------HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCC
Q ss_conf 68--8-------147899764310002478607971462157661346----8999998631360898613112223477
Q gi|254780486|r 143 HN--N-------INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGP 209 (381)
Q Consensus 143 Hn--D-------~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~ 209 (381)
++ + .+++++.+...... ++....+++|.|.+..|-+.| |++++++|++||++||+||+| +| +||
T Consensus 758 ~~~~~~~~~~~~~~~~~~~i~~l~~~-~~~~Aa~I~EpIqg~gG~~~~p~gyl~~v~~~c~~~G~LlI~DEVQ-tG-fGR 834 (1015)
T PRK06148 758 ERWPDAEHGRRFAESVAEQIAAMRAQ-GRAPAFFIAESIPSVAGQVFLPEGYLREVYAMVRAAGGVCIADEVQ-VG-FGR 834 (1015)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHC-CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC-CC-CCC
T ss_conf 78981678999999999999998715-8815899978833788840798899999999999839789995453-38-782
Q ss_pred CCC--EEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCC-CCCCCHHHHHHHHHHHHHHCC
Q ss_conf 764--01100001346521001346565302---675245100100001211000013-577502578988789886271
Q gi|254780486|r 210 LGK--GLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTT-SPSPILAVVACEALKLIKRKP 283 (381)
Q Consensus 210 ~G~--G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst-~l~P~~~aaa~aal~~l~~~~ 283 (381)
||. ..++++++.|+++ |++|++|+ | |.+++++++.+.+.+ +.. -||| +.+|..|++++++|++++++.
T Consensus 835 TG~~~fa~e~~gV~PDIv---t~aKglg~-G~PlgAv~~~~ei~~~f~~-g~~-~~sTfgGnPlacAaalavLdii~~e~ 908 (1015)
T PRK06148 835 VGSHWWAFETQGVVPDIV---TMGKPIGN-GHPMSAVVTTREIADSFDN-GME-YFNTFGGNPVSCAIGLAVLDIIEDED 908 (1015)
T ss_pred CCCCCCEEHHCCCCCCEE---EECCCCCC-CCCCEEEEECHHHHHHHCC-CCC-CCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 366300003129988879---86564447-8676788985999975426-875-26887869999999999999998737
Q ss_pred CHHHHHHHHHHHHH-HHHH--CCCC----CCCCCCEEEEEEC--------CHHHHHHHHHHHHHCCEEEEEECCCCCCCC
Q ss_conf 02247899999999-8764--1797----8998972899958--------979999999999977918986228888888
Q gi|254780486|r 284 ALHKSLLQLINITD-KIAN--KKIG----FSSQSHIQSIVIG--------DNKSCLNIAKNLQKKGFDIRAIRPPTVPIN 348 (381)
Q Consensus 284 ~~~~~l~~~~~~~~-~~~~--~~~g----~~~~s~I~~v~~g--------d~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~ 348 (381)
+.++.++...++. ++.. .+.+ +.+..-.+.|.+. ....+..+.++|+++||++..-. | .
T Consensus 909 -L~~na~~~G~~l~~~L~~L~~~~p~IgdVRG~GLm~GiElV~d~~tk~Pa~~~~~~v~~~~~e~GvLi~~~G----~-~ 982 (1015)
T PRK06148 909 -LRRNALEIGNYLLAGFRSLQQRFDIIGDVRGLGLFLGIELVTDRKTKAPATAIARKVKDGARERGILIGTEG----P-K 982 (1015)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEECCC----C-C
T ss_conf -999999999999999999886089688761277089999635877789639999999999997891893278----9-9
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 7039996287899999999999999998873
Q gi|254780486|r 349 TARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 349 ~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
...|||.++...|+||+|.++++|++++.+-
T Consensus 983 ~nVlri~PPL~it~e~~D~~l~~Ld~vl~a~ 1013 (1015)
T PRK06148 983 DNVLKMRPPMIFSRADADHLLEVLDDSFAAA 1013 (1015)
T ss_pred CCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 8879980896455999999999999999997
No 34
>PRK09044 consensus
Probab=100.00 E-value=3.7e-35 Score=239.27 Aligned_cols=342 Identities=15% Similarity=0.211 Sum_probs=236.2
Q ss_pred HHHHHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--
Q ss_conf 999975983999289768980344---656677988999999999986378688722443688589999999984012--
Q gi|254780486|r 14 QKIKSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF-- 88 (381)
Q Consensus 14 ~~~~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~-- 88 (381)
.-.+++|.|.++.||++||||.|. .-||- +||+|++|+.+++++ ... ...+.+ .++...+|-++|++++
T Consensus 27 ~i~r~~G~~l~D~dG~~ylD~~sg~~~~~lGh-~~p~v~~Ai~~Q~~~-l~~-~~~~~~---~~~~~~~la~~L~~~~p~ 100 (418)
T PRK09044 27 PVVRTEGSRLYLADGRELVDGVASWWTACHGY-NHPHIAEAVREQLDR-MPH-VMFGGL---AHEPAYRLASRLAAILPG 100 (418)
T ss_pred EEEEEECCEEEECCCCEEEECCCCHHHHCCCC-CCHHHHHHHHHHHHH-CCC-CCCCCC---CCHHHHHHHHHHHHHCCC
T ss_conf 68983659899799999989022779652268-989999999999975-888-345874---677999999999985788
Q ss_pred CCCCEEEECCCCHHHHHHHHHH---------CCCCCCCCHHHHCCHHHHHHHHHCCCC---------------CEEECC-
Q ss_conf 8885167416602456556663---------168971004542026775266640876---------------403056-
Q gi|254780486|r 89 GFEKMLYFGSGYAANMAILSTL---------PQATDLIVYDKLVHASIREGINSGKAQ---------------AIAIPH- 143 (381)
Q Consensus 89 g~e~al~~~sG~~An~~~i~~l---------~~~~d~ii~D~~~HaSi~~g~~ls~a~---------------~~~f~H- 143 (381)
+.+.+++++||..||.+++..- .++..+|-.+..-|..-.-...+++.+ ...++.
T Consensus 101 ~l~~v~f~~SGsEAvE~AiKlA~~y~~~r~~tgr~~ii~~~~~yHG~T~ga~s~~~~~~~~~~~~~~~~p~~~~~~~p~~ 180 (418)
T PRK09044 101 DLERVFFSDSGSVAVEVAMKMAVQYWLNRGERGRTKFLAFRGGYHGDTLATMAVCDPEEGMHSLFAGVLPEQVIADLPRD 180 (418)
T ss_pred CCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEECCCCC
T ss_conf 75869862867899999999999999862456776289961877786666621157755766777898997614579998
Q ss_pred -CCHHHHHHHHHHHHHCCCCCCCEEEECC-CCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-EE
Q ss_conf -8814789976431000247860797146-2157661346----899999863136089861311222347776401-10
Q gi|254780486|r 144 -NNINSFAENINKWRKSGGKGFPWIVVES-IYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL-TH 216 (381)
Q Consensus 144 -nD~~~Le~~l~~~~~~~~~~~~~vv~eg-v~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~-~~ 216 (381)
++.+.++..+.+. ......|++|. |-+..|.+.| |+++++||++||++||+||++ +| +|++|+.. ++
T Consensus 181 ~~~~~~l~~~~~~~----~~~iAavi~EP~iqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~-tG-~GRtG~~fa~~ 254 (418)
T PRK09044 181 AASEAALDALLERH----GGEIAAILVEPLVQGAGGMLFHDPEVLRRLRRLADRHGLLLIFDEIF-TG-FGRTGTMFAFE 254 (418)
T ss_pred HHHHHHHHHHHHHC----CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCC-CC-CCCCCCCCHHH
T ss_conf 67899999999757----99778999946635789874898899999999998749867721220-36-87667853233
Q ss_pred EHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCC--CCCEEC--CCCCCCCHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 0001346521001346565302---6752451001000012--110000--13577502578988789886271022478
Q gi|254780486|r 217 IIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINY--AKPFIY--TTSPSPILAVVACEALKLIKRKPALHKSL 289 (381)
Q Consensus 217 ~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~--~~~~if--st~l~P~~~aaa~aal~~l~~~~~~~~~l 289 (381)
++++.|+++ |++|++|+.. +.+++++++.+.+... ...+.+ |-+.+|..|++++++|+++++++ +.++.
T Consensus 255 ~~gv~PDiv---t~gKgl~gG~~Plsav~~~~~i~~~~~~~~~~~~~~hg~T~~gnpl~cAaala~L~~i~~~~-l~~~~ 330 (418)
T PRK09044 255 QAGVVPDIV---TLSKALTGGTLPLAATVASRRVFEAFWSDDPGHALMHGPTYMGNPLACAAANASLDLFEDEP-RLEQV 330 (418)
T ss_pred HCCCCCCEE---EECHHCCCCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC-HHHHH
T ss_conf 259588724---30200148877610235539999975037987550217888899899999999999997347-99999
Q ss_pred HHHHHHHHHHHHCCCC------CCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHH
Q ss_conf 9999999987641797------8998972899958979999999999977918986228888888703999628789999
Q gi|254780486|r 290 LQLINITDKIANKKIG------FSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEP 363 (381)
Q Consensus 290 ~~~~~~~~~~~~~~~g------~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~e 363 (381)
.+..+++.+....... +.+...+..+.+.++..+..+.++++++|+++.+. + ..||++|+...|++
T Consensus 331 ~~~g~~l~~~L~~~~~~~~v~~VRG~Glm~~iel~~~~~~~~~~~~~~~~Gv~v~~~-------g-n~irl~PpL~it~~ 402 (418)
T PRK09044 331 AAIEAQLRAGLEPCRDLPGVVDVRVLGAIGVVELERIPPLDDLRARFVDRGVWIRPF-------R-NIVYLTPAFTIAED 402 (418)
T ss_pred HHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHCCCEEEEC-------C-CEEEEECCCCCCHH
T ss_conf 999999999999753699779880055799999368576999999999789779745-------9-99999799578999
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999998873
Q gi|254780486|r 364 TIVKLFDILPQIISEG 379 (381)
Q Consensus 364 di~~~~~~l~~v~~E~ 379 (381)
|||.++++|+++++|+
T Consensus 403 eid~~~~~l~~~l~E~ 418 (418)
T PRK09044 403 DLARLTAAIRQVVAEG 418 (418)
T ss_pred HHHHHHHHHHHHHHCC
T ss_conf 9999999999998577
No 35
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=100.00 E-value=4.6e-35 Score=238.74 Aligned_cols=337 Identities=17% Similarity=0.218 Sum_probs=236.5
Q ss_pred HHHHHHCCCEEEECCCCEEEECCCCC---CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 99999759839992897689803446---566779889999999999863786887224436885899999999840128
Q gi|254780486|r 13 LQKIKSKGRHRQLLRRQDIWDFTSHD---YLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG 89 (381)
Q Consensus 13 l~~~~~~g~~~~~~~~~~~l~f~s~d---YLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g 89 (381)
+.-.+++|.+.++.||++||||.|.- -||- +||+|.+|+.+++++.+.++. . + .++...+|-++|.+...
T Consensus 19 ~vi~ra~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~Ai~~q~~~~~~~~~---~-~--~~~~~~~la~~L~~~~~ 91 (397)
T TIGR03246 19 FIPVRGEGSRVWDQQGKEYIDFAGGIAVNALGH-AHPELVKALIEQADKLWHIGN---G-Y--TNEPVLRLAKKLVDATF 91 (397)
T ss_pred CEEEEEECCEEEECCCCEEEECCCCHHHHHHCC-CCHHHHHHHHHHHHHCCCCCC---C-C--CCHHHHHHHHHHHHHCC
T ss_conf 428983649999698799999463487665578-988999999999965777768---6-3--48899999999975148
Q ss_pred CCCEEEECCCCHHHHHHHHHH---------CCCCCCCCHHHHCCHHHHHHHHHCCC------------CCEEECCCCHHH
Q ss_conf 885167416602456556663---------16897100454202677526664087------------640305688147
Q gi|254780486|r 90 FEKMLYFGSGYAANMAILSTL---------PQATDLIVYDKLVHASIREGINSGKA------------QAIAIPHNNINS 148 (381)
Q Consensus 90 ~e~al~~~sG~~An~~~i~~l---------~~~~d~ii~D~~~HaSi~~g~~ls~a------------~~~~f~HnD~~~ 148 (381)
.+.+.+++||..||..++..- .++..+|-.+..-|..-.-+..+++. .+..++.||++.
T Consensus 92 ~~~v~f~~sGsEA~e~AlklAr~~~~~~~~~~k~~iis~~~~yHG~t~~~~s~~~~~~~~~~~~p~~~~~~~~~~~d~~~ 171 (397)
T TIGR03246 92 ADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHGRTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAA 171 (397)
T ss_pred CCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHH
T ss_conf 77699728677899999999999998517999768999727868985641046899655678889997642045233999
Q ss_pred HHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-EEEHHCCCC
Q ss_conf 899764310002478607971462157661346----899999863136089861311222347776401-100001346
Q gi|254780486|r 149 FAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL-THIIEERNN 223 (381)
Q Consensus 149 Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~-~~~~~~~~~ 223 (381)
+++.+.. ....|++|.|-+..|.+.| +++++++|++||++||+||++ +| +|++|.+. .+++++.||
T Consensus 172 ~~~~~~~-------~iaAvi~EPv~g~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~-tG-fGRtG~~~a~~~~gv~PD 242 (397)
T TIGR03246 172 AKALISD-------KTCAVIVEPIQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQ-TG-VGRTGELYAYMHYGVTPD 242 (397)
T ss_pred HHHHHCC-------CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCEE-EC-CCCCCCCCHHHCCCCCCC
T ss_conf 9985288-------73799993877888987388899999999999859358634122-07-877778314322698998
Q ss_pred CCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HH
Q ss_conf 521001346565302---67524510010000121100001357750257898878988627102247899999999-87
Q gi|254780486|r 224 VIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITD-KI 299 (381)
Q Consensus 224 ~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~-~~ 299 (381)
++ ||+|++|+ | |.+++++++.+.+.....+..| +.+|..|++++++|++++++. +.++..+..+++. ++
T Consensus 243 iv---~~gK~l~g-G~P~sav~~~~~i~~~~~~~~h~~T~--~gnpl~~aaala~L~~i~~e~-l~~~~~~~g~~l~~~L 315 (397)
T TIGR03246 243 IL---TSAKALGG-GFPIGAMLTTTEIAAHLKVGTHGTTY--GGNPLACAVAGKVLDLVNTPE-LLAGVKQRHDLFVDGL 315 (397)
T ss_pred EE---EECCCCCC-CCEEEEEEECHHHHHHCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHH
T ss_conf 78---87422468-84048997448888651877738668--829999999999999998547-9999999999999999
Q ss_pred HH--CCCC----CCCCCCEEEEEECC--HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf 64--1797----89989728999589--7999999999997791898622888888870399962878999999999999
Q gi|254780486|r 300 AN--KKIG----FSSQSHIQSIVIGD--NKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDI 371 (381)
Q Consensus 300 ~~--~~~g----~~~~s~I~~v~~gd--~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~ 371 (381)
.. .+.+ +.+..-...+.+.+ ...+.++.+.++++|+++... |...|||.|+..+|++|||.++++
T Consensus 316 ~~l~~~~~~i~~VRG~Glm~giel~~~~~~~a~~i~~~~~~~Gll~~~~-------g~n~lrl~PPL~it~eeid~~l~~ 388 (397)
T TIGR03246 316 EKINARYNVFSEIRGKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALIA-------GPNVVRFAPSLVISDDDIDEGLAR 388 (397)
T ss_pred HHHHHHCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEEC-------CCCEEEEECCCCCCHHHHHHHHHH
T ss_conf 9987417987754224359999972786335999999999789289307-------999799978851899999999999
Q ss_pred HHHHHHHH
Q ss_conf 99998873
Q gi|254780486|r 372 LPQIISEG 379 (381)
Q Consensus 372 l~~v~~E~ 379 (381)
|+++++|+
T Consensus 389 l~~al~~v 396 (397)
T TIGR03246 389 FERAIEQV 396 (397)
T ss_pred HHHHHHHH
T ss_conf 99999986
No 36
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=100.00 E-value=5.2e-35 Score=238.39 Aligned_cols=357 Identities=17% Similarity=0.193 Sum_probs=240.2
Q ss_pred CCCCHHHHHHHHHHH-------------HHHCCCEEEECCCCEEEECCCCC-CCCCC-CCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 988657899999999-------------99759839992897689803446-56677-9889999999999863786887
Q gi|254780486|r 1 MKNIQMSFYEERLQK-------------IKSKGRHRQLLRRQDIWDFTSHD-YLALS-SSTLLREKILSSLDSKIPIGSG 65 (381)
Q Consensus 1 m~~~~~~~~~~~l~~-------------~~~~g~~~~~~~~~~~l~f~s~d-YLGl~-~~p~v~~a~~~a~~~~~g~~~~ 65 (381)
|+|++ ..++++.+- -+++|.|.+..+|++||||.|.- -..|. .||+|.+|+.++++ +... ++
T Consensus 2 ~~~~~-~l~~r~~~~~~~~~~~~~Pi~i~ra~G~~l~D~dG~~YLD~~~g~~~~~lGH~hp~i~~Av~~q~~-~l~~-~~ 78 (426)
T PRK08088 2 MKTNK-SLMQRRSAAVPRGVGQIHPIFADRAENCTVWDVEGREYIDFAGGIAVLNTGHLHPKVVAAVEAQLK-KLSH-TC 78 (426)
T ss_pred CCCCH-HHHHHHHHHCCCCCCCCCCCEEEEEECCEEEECCCCEEEECCCCHHHHHCCCCCHHHHHHHHHHHH-HCCC-CC
T ss_conf 86309-999999975589889899933997352989969989999915168865108996999999999986-4788-56
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCC---CCCEEEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHHHHHHHHCCC---
Q ss_conf 224436885899999999840128---88516741660245655666---316897100454202677526664087---
Q gi|254780486|r 66 GSRLLCGNYNQHLELEEEAADFFG---FEKMLYFGSGYAANMAILST---LPQATDLIVYDKLVHASIREGINSGKA--- 136 (381)
Q Consensus 66 ~sr~~~G~~~~~~~lE~~lA~~~g---~e~al~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi~~g~~ls~a--- 136 (381)
.+ .-.++...+|-++|++++. .+.+++++||..||.+++.. ..++..+|-.+..-|..-..+..+++.
T Consensus 79 ~~---~~~~~~~~~lae~l~~~~p~~~~~~v~f~~sGsEAve~AiklAR~~tgr~~ii~~~~syHG~t~~a~s~tg~~~~ 155 (426)
T PRK08088 79 FQ---VLAYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRSGVIAFTGAYHGRTHYTLALTGKVNP 155 (426)
T ss_pred CC---CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHCCCCCC
T ss_conf 77---556679999999999857755565588549769999999999877643666366357748985212542488777
Q ss_pred ----------CCE--EEC---C-----CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHC
Q ss_conf ----------640--305---6-----88147899764310002478607971462157661346----89999986313
Q gi|254780486|r 137 ----------QAI--AIP---H-----NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDY 192 (381)
Q Consensus 137 ----------~~~--~f~---H-----nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y 192 (381)
.+. .|+ | +++..+++.++. ...++....|++|.|.+..|.+.| +++++++|++|
T Consensus 156 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~iAAvi~EPi~g~gG~~~~~~~yl~~lr~lc~~~ 233 (426)
T PRK08088 156 YSAGMGLMPGHVYRALYPCPLHGVSEDDAIASIERIFKN--DAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDQH 233 (426)
T ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH--CCCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHC
T ss_conf 667788999874026688623578816799999999974--478776789997775677886638879999999999876
Q ss_pred CEEEEECCCCCCCCCCCCCCEE-EEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCH
Q ss_conf 6089861311222347776401-100001346521001346565302---675245100100001211000013577502
Q gi|254780486|r 193 DGFIVVDEAHATGVCGPLGKGL-THIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPIL 268 (381)
Q Consensus 193 ~~~LivDEah~~Gv~G~~G~G~-~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~ 268 (381)
|++||+||++ +| +|++|+.. .+++++.||++ ||+|++|+ | +.+++++++++.+.... +-.|-+.+|..
T Consensus 234 g~llI~DEV~-tG-fGRtG~~fa~~~~gv~PDii---~~gK~l~g-G~Plsav~~~~~i~~~~~~~~--~~~T~~gnpla 305 (426)
T PRK08088 234 GIMLIADEVQ-TG-AGRTGTFFAMEQMGVAADLT---TFAKSIAG-GFPLAGVTGRAEVMDAIAPGG--LGGTYAGNPIA 305 (426)
T ss_pred CCEEECCCCC-CC-CCCCCCHHHHHHCCCCCCEE---EHHHHHCC-CCCCCCEEECHHHHHHCCCCC--CCCCCCCCHHH
T ss_conf 9058763302-28-77667413566419897620---12144038-887500000399995336888--78888989899
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHHHC--CCC----CCCCCCEEEEEE--------CCHHHHHHHHHHHHHC
Q ss_conf 57898878988627102247899999999-87641--797----899897289995--------8979999999999977
Q gi|254780486|r 269 AVVACEALKLIKRKPALHKSLLQLINITD-KIANK--KIG----FSSQSHIQSIVI--------GDNKSCLNIAKNLQKK 333 (381)
Q Consensus 269 ~aaa~aal~~l~~~~~~~~~l~~~~~~~~-~~~~~--~~g----~~~~s~I~~v~~--------gd~~~a~~~~~~L~~~ 333 (381)
|++++++|+++++++ +.++.++..+++. ++... ..+ +.+..-...|.+ +++..+.++..+++++
T Consensus 306 ~Aaa~a~L~~l~~e~-l~~~~~~~G~~l~~~L~~l~~~~p~i~~VRG~GLm~gvelv~~~~~~~p~~~~~~~i~~~~~~~ 384 (426)
T PRK08088 306 CAAALAVLEVFEEEN-LLQRANALGERLKDGLLAIAEKHPEIGDVRGLGAMIAIELFEDGDHSKPAAKLTAQIVARARDK 384 (426)
T ss_pred HHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHC
T ss_conf 999999999998658-9999999999999999999860998899994455999998606876787899999999999968
Q ss_pred CEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9189862288888887039996287899999999999999998873
Q gi|254780486|r 334 GFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 334 Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
|+++.... .....|||.++...|++|||+.+++|+++++|-
T Consensus 385 Gll~~~~g-----~~gnvir~~PPL~it~~eid~~~~~l~~al~ea 425 (426)
T PRK08088 385 GLILLSCG-----TYYNVLRILVPLTIEDAQIRQGLEIIAQCFDEA 425 (426)
T ss_pred CCEEEECC-----CCCCEEEEECCEECCHHHHHHHHHHHHHHHHHH
T ss_conf 99998338-----999989997893478999999999999999953
No 37
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.1e-34 Score=236.43 Aligned_cols=343 Identities=17% Similarity=0.209 Sum_probs=232.6
Q ss_pred HHCCCEEEECCCCEEEECCCCCC---CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC---
Q ss_conf 97598399928976898034465---667798899999999998637868872244368858999999998401288---
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSHDY---LALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF--- 90 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~dY---LGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~--- 90 (381)
+++|.|.++.||++||||.|.-. ||- +||+|.+|+.++++ +.... +.+. + .++.-.+|-++|+++...
T Consensus 33 ra~G~~l~D~dG~~yLD~~sg~~~~~lGh-~~p~v~~Ai~~ql~-~l~~~-~~~~-~--~~~~~~~la~~L~~~~p~~~~ 106 (448)
T PRK08593 33 HGYGATLVDIEGKTYIDLLASASSQNVGH-APPEVVEAIKAQAD-KFIHY-TPAY-M--YHEPLVRLAKKLCELAPGDFE 106 (448)
T ss_pred EEECCEEEECCCCEEEEECCCHHHHHCCC-CCHHHHHHHHHHHH-CCCCC-CCCC-C--CCHHHHHHHHHHHHHCCCCCC
T ss_conf 73549899699699999352376401048-98999999999984-07673-6663-1--467999999999985786766
Q ss_pred CCEEEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHHHHHHHHCC---------------CCCEEECC--------C
Q ss_conf 8516741660245655666---31689710045420267752666408---------------76403056--------8
Q gi|254780486|r 91 EKMLYFGSGYAANMAILST---LPQATDLIVYDKLVHASIREGINSGK---------------AQAIAIPH--------N 144 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi~~g~~ls~---------------a~~~~f~H--------n 144 (381)
..+++.+||..||.+++.. ..++..+|-.+..-|.+-.-...+++ ...++|++ +
T Consensus 107 ~~v~f~~SGsEAvE~AlKlAr~~tgr~~ii~~~~~yHG~T~ga~s~sg~~~~~~~~~~p~~p~~~~vp~p~~~~~~~~~~ 186 (448)
T PRK08593 107 KRVTFGLSGSDANDGIIKFARAYTGRPYIISFTNAYHGSTYGSLSMSAISLNMRKKYGPLLPGFYHIPFPDKYRGMYEEP 186 (448)
T ss_pred CEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
T ss_conf 37997187578999999999754899879999478776873400104787565445689999957807986334545787
Q ss_pred CHHHHHHHHHHHH---HC--CCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-
Q ss_conf 8147899764310---00--2478607971462157661346----899999863136089861311222347776401-
Q gi|254780486|r 145 NINSFAENINKWR---KS--GGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL- 214 (381)
Q Consensus 145 D~~~Le~~l~~~~---~~--~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~- 214 (381)
+.+..++.++... .. .++....|++|.|.+..|.+.| |+++++||++||++||+||++ +| +|++|...
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~iAAvi~EPvqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~-tG-fGRtG~~fa 264 (448)
T PRK08593 187 QANSVEEYLAPLKEMFEKYVPADEVACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQ-QG-LGRTGKWSS 264 (448)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEEEE-CC-CCCCCCCHH
T ss_conf 0679999999999999851788976999997887888987388788689999998668069874300-17-775676035
Q ss_pred EEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 100001346521001346565302---67524510010000121100001357750257898878988627102247899
Q gi|254780486|r 215 THIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQ 291 (381)
Q Consensus 215 ~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~ 291 (381)
.+++++.||++ ||+|++|+ | |.+++++++.+.+.. ....||.+.+|..|++++++|++++++. +.++.++
T Consensus 265 ~e~~gv~PDiv---~~gKgl~g-G~Plsav~~~~ei~~~~~~--~~h~~T~~Gnpla~aaa~a~L~~i~~~~-l~~~~~~ 337 (448)
T PRK08593 265 ISHFNITPDLM---TFGKSLAG-GMPMSAIVGRKEIMESLEA--PAHLFTTGANPVSCEAALATIDMIEDES-LLQASAE 337 (448)
T ss_pred HHHCCCCCCEE---EECCCCCC-CCCEEEEEECHHHHHHCCC--CCCCCCCCCCHHHHHHHHHHHHHHHHCC-HHHHHHH
T ss_conf 54305288867---77300258-8740799875898852178--8656578999899999999999997443-9999999
Q ss_pred HHHHHHH-HHH--CCCC----CCCCCCEEEEEE--------CCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEC
Q ss_conf 9999998-764--1797----899897289995--------897999999999997791898622888888870399962
Q gi|254780486|r 292 LINITDK-IAN--KKIG----FSSQSHIQSIVI--------GDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISI 356 (381)
Q Consensus 292 ~~~~~~~-~~~--~~~g----~~~~s~I~~v~~--------gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v 356 (381)
..+++.+ +.. ...+ +.+..-+..|.+ +++..+.++.++++++|+++.+. +...|||.|
T Consensus 338 ~g~~l~~~L~~l~~~~p~v~dVRG~GL~~giElv~~~~~~~~~~~~~~~v~~~~~~~Gll~~~~-------~gn~ir~~P 410 (448)
T PRK08593 338 KGEYVRKRFDQWVSKYNFVGDVRGKGLSIGIDIVSDKKLKTRDAEAALKICNYCFEHGVVIIAV-------AGNVLRFQP 410 (448)
T ss_pred HHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEC-------CCCEEEEEC
T ss_conf 9999999999998629978873025517899996455557888899999999999789089867-------999899978
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 8789999999999999999887387
Q gi|254780486|r 357 TLNVDEPTIVKLFDILPQIISEGNS 381 (381)
Q Consensus 357 ~a~~t~edi~~~~~~l~~v~~E~~s 381 (381)
+...|++|||.++++|+++++|++.
T Consensus 411 pL~it~~eid~~~~~l~~al~~l~a 435 (448)
T PRK08593 411 PLVITYEQLDTALNTIEDALTALEA 435 (448)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 9008899999999999999999874
No 38
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=100.00 E-value=5.8e-36 Score=244.29 Aligned_cols=333 Identities=17% Similarity=0.216 Sum_probs=227.5
Q ss_pred HHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC--
Q ss_conf 975983999289768980344---656677988999999999986378688722443688589999999984012888--
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE-- 91 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e-- 91 (381)
+++|.|.++.||++||||.+. .-||- +||+|++|+.+++++ +... .-.++.-.+|.++|++.++.+
T Consensus 41 ra~G~~l~D~dGn~YiD~~~g~g~~~lGH-~hp~V~~Av~~q~~~--~~~~------~~~~~~~~~lAe~L~~~~~~~~~ 111 (433)
T PRK00615 41 SASGDIFIDSFGKTFIDFCGSWGSLIHGH-SHPKICDAIQQGASR--GTSY------GLTSEQEILFATELFSYLGLEDH 111 (433)
T ss_pred EEECCEEEECCCCEEEEHHHHHHHHHHCC-CCHHHHHHHHHHHHH--CCCC------CCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 71439899698998777014188633167-988999999999964--6656------77888999999999862798636
Q ss_pred CEEEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHH---HHHHHHCC----------------CCCEEECCCCHHHH
Q ss_conf 516741660245655666---316897100454202677---52666408----------------76403056881478
Q gi|254780486|r 92 KMLYFGSGYAANMAILST---LPQATDLIVYDKLVHASI---REGINSGK----------------AQAIAIPHNNINSF 149 (381)
Q Consensus 92 ~al~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi---~~g~~ls~----------------a~~~~f~HnD~~~L 149 (381)
...+++||..||..++.. .+++..+|-.+..-|..- ..|..... .....++.||++.+
T Consensus 112 ~V~F~nSGsEA~e~AiklAR~~TgR~~Ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~nd~~~~ 191 (433)
T PRK00615 112 KIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFDETNLDNLTHLVDTDLPHPLTLSLPYNDSQIF 191 (433)
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCHHHH
T ss_conf 59971883999999999972264887699996776787200123145787666789877778888785216787739999
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCE-EEEEHHCCCCC
Q ss_conf 99764310002478607971462157661346----89999986313608986131122234777640-11000013465
Q gi|254780486|r 150 AENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKG-LTHIIEERNNV 224 (381)
Q Consensus 150 e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G-~~~~~~~~~~~ 224 (381)
++.++++. +....|++|.|-+..|.+.| |+++++||++||++||+||++ +|+ |+|.+ .++++++.||+
T Consensus 192 e~~~~~~~----~~iAAvi~EPi~~~~G~i~p~~~yL~~lr~lc~~~giLLI~DEV~-tGf--Rtg~~~a~e~~gV~PDi 264 (433)
T PRK00615 192 HEVMEQLG----HRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRFGSLSIMDEVV-TGF--RVAFGGAAAIFDVKPDI 264 (433)
T ss_pred HHHHHHCC----CCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCC-CCC--EECCCHHHHHHCCCCCE
T ss_conf 99998515----430357875502468876899899999999987659389851341-160--62540577873998617
Q ss_pred CCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEEC-CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HH
Q ss_conf 21001346565302---6752451001000012110000-1357750257898878988627102247899999999-87
Q gi|254780486|r 225 IVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIY-TTSPSPILAVVACEALKLIKRKPALHKSLLQLINITD-KI 299 (381)
Q Consensus 225 iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~if-st~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~-~~ 299 (381)
+ ||+|++|+ | |.+++++++++.+...+..|.. |-+.+|..++|++++|+++++++ ..+++.+..+.+. .+
T Consensus 265 ~---t~gK~lgg-G~Pi~Av~g~~~im~~~~~~g~~~~~gTf~gnpla~AAa~AtL~~l~~~~-~~~~~~~~g~~l~~gl 339 (433)
T PRK00615 265 T---VYGKILGG-GLPAAAVVAHRSIMDHLMPEGTIFQAGTLSGNPLAMAAGKASIELCREEG-FYTQLSNLEQLFLSPI 339 (433)
T ss_pred E---EECCCCCC-CCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHH
T ss_conf 8---75455679-98705666869999863778986546887406999999999999983578-9999999999999999
Q ss_pred --HHCCCCCC----CCCCEEEEEEC-------------CHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCC
Q ss_conf --64179789----98972899958-------------979999999999977918986228888888703999628789
Q gi|254780486|r 300 --ANKKIGFS----SQSHIQSIVIG-------------DNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNV 360 (381)
Q Consensus 300 --~~~~~g~~----~~s~I~~v~~g-------------d~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~ 360 (381)
.....+++ ....+..+.+. |......+...|++|||+..|..+ -+..+++.|
T Consensus 340 ~~~~~~~g~~~~v~~~gs~~~~~f~~~~~~~~~~~~~~d~~~~~~f~~~~l~rGV~~~p~~~---------~~~fis~aH 410 (433)
T PRK00615 340 EEMIRSQGFPVSLVRYGSMFSFFFRENRPTNLDEAQLSDVEKFQTFYQEAFSKGVYLSPSPF---------EASFLSSAH 410 (433)
T ss_pred HHHHHHCCCCEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC---------CCCCCCCCC
T ss_conf 99999769988997557679999679998899999863599999999999978978898632---------264643024
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999998873
Q gi|254780486|r 361 DEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 361 t~edi~~~~~~l~~v~~E~ 379 (381)
|+||||++++++.+.++|.
T Consensus 411 t~edi~~t~~a~~~al~~~ 429 (433)
T PRK00615 411 SMENLAYAQNVLIDSLEKI 429 (433)
T ss_pred CHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999999
No 39
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=100.00 E-value=6.6e-35 Score=237.75 Aligned_cols=336 Identities=18% Similarity=0.226 Sum_probs=231.3
Q ss_pred HHHHHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 999975983999289768980344---65667798899999999998637868872244368858999999998401288
Q gi|254780486|r 14 QKIKSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF 90 (381)
Q Consensus 14 ~~~~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~ 90 (381)
.-.|++|.+.+..||++||||.+. .-||- +||+|.+++.+++++.+.++. . + .++...+|-++|.+....
T Consensus 24 vi~ra~G~~l~D~dG~~yLD~~~g~~~~~lGh-~~p~v~~Ai~~q~~~l~~~~~---~-~--~~~~~~~la~~L~~~~~~ 96 (406)
T PRK12381 24 IPVRGEGSRLWDQQGKEYIDFAGGIAVNALGH-AHPALREALNEQASKFWHTGN---G-Y--TNEPVLRLAKKLIDATFA 96 (406)
T ss_pred EEEEEECCEEEECCCCEEEECCCCHHHCEECC-CCHHHHHHHHHHHHHCCCCCC---C-C--CCHHHHHHHHHHHHCCCC
T ss_conf 38984539899799899999160887452389-989999999999865566778---7-3--688999999998730587
Q ss_pred CCEEEECCCCHHHHHHHHHH---------CCCCCCCCHHHHCCHHHHHHHHHCCC------------CCEEECCCCHHHH
Q ss_conf 85167416602456556663---------16897100454202677526664087------------6403056881478
Q gi|254780486|r 91 EKMLYFGSGYAANMAILSTL---------PQATDLIVYDKLVHASIREGINSGKA------------QAIAIPHNNINSF 149 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~l---------~~~~d~ii~D~~~HaSi~~g~~ls~a------------~~~~f~HnD~~~L 149 (381)
+.+++++||..||.+++..- .++..+|-.+..-|........+++- .+..+++||++.+
T Consensus 97 ~~v~f~~SGsEAve~AiKlAr~~~~~~~~~~r~~Ii~~~~~yHG~t~~~~s~~g~~~~~~~~~p~~~~~~~~~~~d~~~~ 176 (406)
T PRK12381 97 DRVFFCNSGAEANEAALKLARKYAHDRYGNHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSA 176 (406)
T ss_pred CEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 64999487778999999999999986389998769996787678832232157873335677889974435652229999
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-EEEHHCCCCC
Q ss_conf 99764310002478607971462157661346----899999863136089861311222347776401-1000013465
Q gi|254780486|r 150 AENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL-THIIEERNNV 224 (381)
Q Consensus 150 e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~-~~~~~~~~~~ 224 (381)
++.+.. ....|++|.|-+-.|.+.| |++++++|++||++||+||++ +| +|++|... ++++++.|++
T Consensus 177 ~~~~~~-------~~aAvivEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~-tG-~GRtG~~~a~~~~gv~PDi 247 (406)
T PRK12381 177 SALIDD-------QTCAVIVEPIQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQ-TG-VGRTGELYAYMHYGVTPDV 247 (406)
T ss_pred HHHHCC-------CCEEEEEECCCCCCCCCCCCHHHHHHHHHHEECCCCEEECCCCE-EC-CCCCCCCCCCCCCCCCCCE
T ss_conf 997388-------83599990645668832689899999997521158379744420-07-7766676535466789988
Q ss_pred CCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-HH
Q ss_conf 21001346565302---675245100100001211000013577502578988789886271022478999999998-76
Q gi|254780486|r 225 IVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDK-IA 300 (381)
Q Consensus 225 iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~-~~ 300 (381)
+ ||+|++|+ | |.+++++++.+.+.....+. |-+.+|..|++++++|+++++++ +.++.++..+++.+ +.
T Consensus 248 v---~~gK~lgg-G~P~sav~~~~~i~~~~~~~~h~~--T~~gnpla~aaa~a~L~~i~~~~-l~~~~~~~g~~l~~~L~ 320 (406)
T PRK12381 248 L---TTAKALGG-GFPIGAMLTTEKYASVMTVGTHGT--TYGGNPLASAVAGKVLDLINTPE-MLNGVKQRHDWFVERLN 320 (406)
T ss_pred E---EECCCCCC-CCEEEEEEECHHHHHHCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHH
T ss_conf 9---97420248-860489987288786528887663--89869999999999999997556-99999999999999999
Q ss_pred H--CCCC----CCCCCCEEEEEECC--HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 4--1797----89989728999589--79999999999977918986228888888703999628789999999999999
Q gi|254780486|r 301 N--KKIG----FSSQSHIQSIVIGD--NKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDIL 372 (381)
Q Consensus 301 ~--~~~g----~~~~s~I~~v~~gd--~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l 372 (381)
. ...+ +.+..-+..+.+.+ ..++..+.+.++++|+++... +...||+.|+...|++|||.++++|
T Consensus 321 ~l~~~~~~i~dVRG~GLm~giel~~~~~~~~~~l~~~~~~~Gll~~~~-------g~n~irl~PPL~it~~eid~~l~~l 393 (406)
T PRK12381 321 TINARYGLFSEIRGLGLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIA-------GPNVVRFAPALNVSEEEIATGLDRF 393 (406)
T ss_pred HHHHHCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHCCEEEEEC-------CCCEEEEECCCCCCHHHHHHHHHHH
T ss_conf 988738988863025269999964887535999999999799699607-------9996999799538999999999999
Q ss_pred HHHHHHH
Q ss_conf 9998873
Q gi|254780486|r 373 PQIISEG 379 (381)
Q Consensus 373 ~~v~~E~ 379 (381)
+++++|.
T Consensus 394 ~~al~~v 400 (406)
T PRK12381 394 ARACERF 400 (406)
T ss_pred HHHHHHH
T ss_conf 9999999
No 40
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=100.00 E-value=6.3e-35 Score=237.84 Aligned_cols=333 Identities=15% Similarity=0.168 Sum_probs=233.8
Q ss_pred HHCCCEEEECCCCEEEECCCCCC-CCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEE
Q ss_conf 97598399928976898034465-6677-988999999999986378688722443688589999999984012888516
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSHDY-LALS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKML 94 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~dY-LGl~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al 94 (381)
|++|.|.++.||++||||.|.-. +.|. +||+|.+++.++++ +..+. ++.+ .++...++.++|+++.+.+.++
T Consensus 32 ra~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~-~l~~~---~~~~--~~~~~~~l~~~l~~~~~~~~v~ 105 (404)
T PRK00854 32 RGEGVWVWDTDGRRYLDCLSAYSAVNQGHCHPKILAAMVEQAG-RLTLT---SRAF--RNDQLAPLYEELAALTGSHKVL 105 (404)
T ss_pred EEECCEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHH-HCCCC---CCCC--CCHHHHHHHHHHHHCCCCCEEE
T ss_conf 8575999979999998826299977542797999999999985-67865---5542--6579999999997403768488
Q ss_pred EECCCCHHHHHHHHHH-----------CCCCCCCCHHHHCCHHHHHHHHHCCC------------CCEEECCCCHHHHHH
Q ss_conf 7416602456556663-----------16897100454202677526664087------------640305688147899
Q gi|254780486|r 95 YFGSGYAANMAILSTL-----------PQATDLIVYDKLVHASIREGINSGKA------------QAIAIPHNNINSFAE 151 (381)
Q Consensus 95 ~~~sG~~An~~~i~~l-----------~~~~d~ii~D~~~HaSi~~g~~ls~a------------~~~~f~HnD~~~Le~ 151 (381)
+++||..||.+++..- .++..+|.....-|.+-.-.+.+++. .+..++.||.+++++
T Consensus 106 f~~SGsEAve~AiklAr~~~~~~~g~~tgr~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~p~~d~~~l~~ 185 (404)
T PRK00854 106 PMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFAPGFRVVPFGDAAALEA 185 (404)
T ss_pred ECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCHHHHHH
T ss_conf 55877999999999999987650378789855999645667860135434677433568889999815505666899998
Q ss_pred HHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-EEEHHCCCCCCC
Q ss_conf 764310002478607971462157661346----899999863136089861311222347776401-100001346521
Q gi|254780486|r 152 NINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL-THIIEERNNVIV 226 (381)
Q Consensus 152 ~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~-~~~~~~~~~~iv 226 (381)
.+. .....|++|.|-+-.|.+.| |++++++|++||++||+||++ +| +|++|... .+++++.||++
T Consensus 186 ~~~-------~~~aAviiEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~-TG-fGRtG~~fa~e~~gv~PDii- 255 (404)
T PRK00854 186 AIT-------PNTVAFLIEPIQGEAGVIIPPAGYFRRVRELCTANNVTLILDEIQ-TG-LGRTGKLLAEEHEGIEADVT- 255 (404)
T ss_pred HHC-------CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC-CC-CCCCCCCCHHHHCCCCCCEE-
T ss_conf 639-------874899991775778961799899999999999707644575000-17-86355741455424897989-
Q ss_pred CCCCCCCCCCE---EEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHHHC
Q ss_conf 00134656530---267524510010000121100001357750257898878988627102247899999999-87641
Q gi|254780486|r 227 MHSCSKALGSS---GALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITD-KIANK 302 (381)
Q Consensus 227 ~~TlsKa~g~~---GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~-~~~~~ 302 (381)
||+|++|+. -|.+++++++.+.+.....+. |-+.+|..|++++++|++++++. +.++.++..+++. ++...
T Consensus 256 --~~gKgl~gG~~Pl~av~~~~~i~~~~~~~~h~~--T~~gnpla~aaa~a~l~~i~~e~-l~~~~~~~g~~l~~~L~~l 330 (404)
T PRK00854 256 --LIGKALSGGFYPVSAVLSNSEVLGVLRPGQHGS--TFGGNPLACAVARAALRVLVEEG-MIENAAEQGAYFLEGLRAI 330 (404)
T ss_pred --EECCCCCCCCCCCCEEECCHHHHHHCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHC
T ss_conf --756444588765320204799995067988778--88989899999999999998658-9999999999999999850
Q ss_pred CCC----CCCCCCEEEEEE-CCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 797----899897289995-897999999999997791898622888888870399962878999999999999999988
Q gi|254780486|r 303 KIG----FSSQSHIQSIVI-GDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 303 ~~g----~~~~s~I~~v~~-gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
.-+ +.+..-+..|.+ .+...+..+.++++++|+++.+. +...||+.|+...|++|||.++++|+++++
T Consensus 331 ~~~~i~~VRG~Glm~gve~~~~~~~~~~~~~~~~~~Gll~~~~-------~~~~ir~~PPL~it~~eid~~l~~l~~~La 403 (404)
T PRK00854 331 RGNIVREVRGRGLMLAVELEPEAGGARQYCEALKARGLLAKDT-------HDHTIRLAPPLVITREQVDWAVSQIAKVLA 403 (404)
T ss_pred CCCCEEEEEECCEEEEEEEECCHHHHHHHHHHHHHCCEEECCC-------CCCEEEEECCCCCCHHHHHHHHHHHHHHHC
T ss_conf 4897276644455999998556677999999999799598748-------999899979957899999999999999966
No 41
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.9e-34 Score=234.82 Aligned_cols=340 Identities=14% Similarity=0.187 Sum_probs=233.3
Q ss_pred HHHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CC
Q ss_conf 9975983999289768980344---656677988999999999986378688722443688589999999984012--88
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF--GF 90 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~--g~ 90 (381)
-+++|.|.++.||++||||.|. .-||- +||+|++|+.+++++ ... ...+.+ +++...+|-++|++.+ +.
T Consensus 31 ~ra~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~Ai~~ql~~-l~~-~~~~~~---~~~~~~~lae~L~~~~p~~l 104 (429)
T PRK06173 31 ERADGVMITLKDGRRLIDGMSSWWAALHGY-NHPRLNAAATNQLSK-MSH-IMFGGF---THEPAVELAQLLLEILPPEL 104 (429)
T ss_pred EECCCCEEEECCCCEEEECCCCHHHHHCCC-CCHHHHHHHHHHHHH-CCC-CCCCCC---CCHHHHHHHHHHHHHCCCCC
T ss_conf 846217899799999998563288532379-989999999999975-778-556775---77799999999998479775
Q ss_pred CCEEEECCCCHHHHHHHHHH---------CCCCCCCCHHHHCCHHHHHHHHHCCC------------C---CEE------
Q ss_conf 85167416602456556663---------16897100454202677526664087------------6---403------
Q gi|254780486|r 91 EKMLYFGSGYAANMAILSTL---------PQATDLIVYDKLVHASIREGINSGKA------------Q---AIA------ 140 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~l---------~~~~d~ii~D~~~HaSi~~g~~ls~a------------~---~~~------ 140 (381)
+.+++++||..||.+++..- .++..++..+..-|.+-+-+..+++. . ..+
T Consensus 105 ~~v~f~~SGsEAvE~AiKlA~~y~~~~g~~~r~~ii~~~~~yHG~T~~a~s~~~~~~~~~~~~~~~~p~~~~~p~~~~~~ 184 (429)
T PRK06173 105 NKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNSSLPVQYFLPQPSVKF 184 (429)
T ss_pred CEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 87997186599999999999999997289876526750588588757677605764466666678898653468998765
Q ss_pred ---ECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCC-CCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCC
Q ss_conf ---056881478997643100024786079714621-57661346----8999998631360898613112223477764
Q gi|254780486|r 141 ---IPHNNINSFAENINKWRKSGGKGFPWIVVESIY-SMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGK 212 (381)
Q Consensus 141 ---f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~-Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~ 212 (381)
|..++++.+++.+++. +.....|++|.+. +..|.+.| |+++++||++||++||+||++ +| +|++|+
T Consensus 185 ~~~~~~~~~~~l~~~~~~~----~~~iAavi~EPi~qg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~-tG-fGRtG~ 258 (429)
T PRK06173 185 GEAWRDEAIEPLQDLLEQH----GDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIA-TG-FGRTGK 258 (429)
T ss_pred CCCCCHHHHHHHHHHHHHC----CCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC-CC-CCCCCC
T ss_conf 6542277999999999855----88636999986446789866789999999998751248557730132-06-873668
Q ss_pred EE-EEEHHCCCCCCCCCCCCCCCCC---EEEEEECCCCCCCCCCCC-CCCEEC--CCCCCCCHHHHHHHHHHHHHHCCCH
Q ss_conf 01-1000013465210013465653---026752451001000012-110000--1357750257898878988627102
Q gi|254780486|r 213 GL-THIIEERNNVIVMHSCSKALGS---SGALVGSNKIIYDYLINY-AKPFIY--TTSPSPILAVVACEALKLIKRKPAL 285 (381)
Q Consensus 213 G~-~~~~~~~~~~iv~~TlsKa~g~---~GG~i~~~~~ii~~l~~~-~~~~if--st~l~P~~~aaa~aal~~l~~~~~~ 285 (381)
.. .+++++.||++ ||+|++|+ ..|.+++++++.+.+... ...|.+ |-+.+|..|++++++|+++++++ +
T Consensus 259 ~fa~e~~gv~PDiv---t~gKglggG~~P~~avi~~~~i~~~~~~g~~~~f~hg~T~~Gnpla~Aaa~a~L~~i~~~~-l 334 (429)
T PRK06173 259 LFALEHAGVVPDIM---CIGKALTGGYLTLSATITTEEIAQTICSGEAKCFMHGPTFMANPLACAIAAESIRLLLESP-W 334 (429)
T ss_pred CCHHHCCCCCCCEE---EECCCCCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC-H
T ss_conf 44532368999789---8554456887761789876899964246876663527899868999999999999998646-9
Q ss_pred HHHHHHHHHHHHH-HHH-CCC----CCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCC
Q ss_conf 2478999999998-764-179----7899897289995897999999999997791898622888888870399962878
Q gi|254780486|r 286 HKSLLQLINITDK-IAN-KKI----GFSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLN 359 (381)
Q Consensus 286 ~~~l~~~~~~~~~-~~~-~~~----g~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~ 359 (381)
.++.++..+++.+ +.. ... .+.+..-+..+.+.++..+..+.++++++|+++.+. + ..|||+|+..
T Consensus 335 ~~~~~~~g~~l~~~L~~~~~~~~v~dVRG~Gl~~~iel~~~~~~~~l~~~~~~~Gll~~~~-------g-~~l~l~PPL~ 406 (429)
T PRK06173 335 QQNIQRIERQLRQELSPAAEFDYVAEVRVLGAIGVVEMKSPVDMATLQPRFVEHGIWVRPF-------G-KLVYLMPPFI 406 (429)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEC-------C-CEEEEECCCC
T ss_conf 9999999999999999631699668742357299999468456999999999699589834-------9-9899958936
Q ss_pred CCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999998873
Q gi|254780486|r 360 VDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 360 ~t~edi~~~~~~l~~v~~E~ 379 (381)
.|++||++++++|+++++|-
T Consensus 407 it~~ei~~~~~~l~~aL~e~ 426 (429)
T PRK06173 407 ISQDELTQLTSGLLRVLTQE 426 (429)
T ss_pred CCHHHHHHHHHHHHHHHHHH
T ss_conf 89999999999999999998
No 42
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-34 Score=234.30 Aligned_cols=342 Identities=20% Similarity=0.259 Sum_probs=242.3
Q ss_pred HHCCCEEEECCCCEEEECCCC-CCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC---C
Q ss_conf 975983999289768980344-656677-98899999999998637868872244368858999999998401288---8
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSH-DYLALS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF---E 91 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~-dYLGl~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~---e 91 (381)
+++|.+.+..+|++||||.|. +-+.+. +||.|++|+.+++++...+ .++.++ .+...++-++|.+.+.. .
T Consensus 44 ra~G~~l~DvdG~~ylDf~sgi~v~~~GH~hP~Vv~Av~~q~~~~~h~---~~~~~~--~e~~v~~ae~L~~~~p~~~~~ 118 (447)
T COG0160 44 RAEGAYLYDVDGNEYLDFLSGIAVLNLGHNHPRVVEAVKRQLAKLNHT---HTRDLY--YEPYVELAEKLTALAPGSGLK 118 (447)
T ss_pred ECCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC---CCCCCC--CHHHHHHHHHHHHHCCCCCCC
T ss_conf 402688995899989882567620103789989999999999973013---577666--336999999999758865677
Q ss_pred CEEEECCCCHHHHHHHH---HHCCCCCCCCHHHHCCHHHHHHHHHCCCC---------------CEEECC--CC------
Q ss_conf 51674166024565566---63168971004542026775266640876---------------403056--88------
Q gi|254780486|r 92 KMLYFGSGYAANMAILS---TLPQATDLIVYDKLVHASIREGINSGKAQ---------------AIAIPH--NN------ 145 (381)
Q Consensus 92 ~al~~~sG~~An~~~i~---~l~~~~d~ii~D~~~HaSi~~g~~ls~a~---------------~~~f~H--nD------ 145 (381)
.+++.+||..||.+++. +.+++..+|-.+.--|....-.+-+++.+ ..+|+. .+
T Consensus 119 ~~~f~~sGaeA~E~AiKiAr~~Tgr~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~ 198 (447)
T COG0160 119 KVFFGNSGAEAVEAAIKIARAYTGRPGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGG 198 (447)
T ss_pred EEEECCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCH
T ss_conf 69956883778999999999985898489978865563266687545766533578899998588168865567555663
Q ss_pred -------HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE
Q ss_conf -------147899764310002478607971462157661346----899999863136089861311222347776401
Q gi|254780486|r 146 -------INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL 214 (381)
Q Consensus 146 -------~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~ 214 (381)
.+.+++.+.... ..+.....+++|.|++-.|.+.| |++++++|++||.+||+||+| .| +|+||+..
T Consensus 199 ~~~~~~~~~~~e~~i~~~~-~~~~~vAaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQ-tG-~GRTG~~f 275 (447)
T COG0160 199 EECGDDALEYIERALFDLE-VGPEEVAAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQ-TG-FGRTGKMF 275 (447)
T ss_pred HHHHHHHHHHHHHHHHHHC-CCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC-CC-CCCCCCCH
T ss_conf 5556899999999987404-787754699984210789974798999999999999819889995665-58-88662601
Q ss_pred -EEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf -100001346521001346565302---6752451001000012110000135775025789887898862710224789
Q gi|254780486|r 215 -THIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLL 290 (381)
Q Consensus 215 -~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~ 290 (381)
.|++++.|++| ||||++|. | |.|++++++.++.. ..+-+|-+.+|..+++++++|++++++ .+.++..
T Consensus 276 a~E~~gv~PDiv---t~aK~ig~-G~Pl~avv~r~ei~~~~~---g~~~~Tf~GNpva~Aaa~AvL~vie~e-~L~~~a~ 347 (447)
T COG0160 276 AFEHFGVEPDIV---TLAKSLGG-GLPLSAVVGRAEIMDWPP---GGHGGTFGGNPVACAAALAVLDVIEEE-NLLERAA 347 (447)
T ss_pred HHHHCCCCCCEE---EECCCCCC-CCCEEEEECCHHHCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHHHC-CHHHHHH
T ss_conf 224209998789---85333457-872067744577601477---654777786989999999999999874-2999999
Q ss_pred HHHHHH-HHH---HHCC--C-CCCCCCCEEEEEE--------CCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEE
Q ss_conf 999999-987---6417--9-7899897289995--------89799999999999779189862288888887039996
Q gi|254780486|r 291 QLINIT-DKI---ANKK--I-GFSSQSHIQSIVI--------GDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRIS 355 (381)
Q Consensus 291 ~~~~~~-~~~---~~~~--~-g~~~~s~I~~v~~--------gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~ 355 (381)
+..+++ +++ ..+. + .+.+..-.+.|.+ ++...+..+.++++++|+++... .....-|||.
T Consensus 348 ~~G~~l~~~L~~l~~~~~~IgdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~-----G~~~nviRi~ 422 (447)
T COG0160 348 ELGEYLRDRLEELQEKHPLIGDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTC-----GPHGNVLRIL 422 (447)
T ss_pred HHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEECC-----CCCCCEEEEE
T ss_conf 99999999999998646744212446507899983378778999999999999999869888545-----7878679982
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 287899999999999999998873
Q gi|254780486|r 356 ITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 356 v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
++...|+|++|+.+++|++++.+.
T Consensus 423 PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 423 PPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 895438999999999999999854
No 43
>PRK06942 glutamate-1-semialdehyde 2,1-aminomutase; Validated
Probab=100.00 E-value=2.6e-35 Score=240.25 Aligned_cols=335 Identities=14% Similarity=0.177 Sum_probs=228.5
Q ss_pred HHHCCCEEEECCCCEEEECCCCC-CCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-CCCC
Q ss_conf 99759839992897689803446-56677-988999999999986378688722443688589999999984012-8885
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSHD-YLALS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF-GFEK 92 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~d-YLGl~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~-g~e~ 92 (381)
-+++|.+.++.||++||||.+.- -+.|. .||+|++|+.+++.+ ++. +...++...+|-++|++++ +.+.
T Consensus 37 ~rg~G~~l~D~dGn~YiD~~~g~g~~~lGH~~p~v~~Av~~q~~~--~~~------~~~~~~~~~~lAe~L~~~~P~~~~ 108 (425)
T PRK06942 37 ARAQGPYFWDADGKRYIDYIGSWGPMIVGHVHPEVLRAVQRVLAD--GFS------FGAPTEAEIEIAEEICKLVPSIEQ 108 (425)
T ss_pred EEEECCEEEECCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHH--CCC------CCCCCHHHHHHHHHHHHHCCCCCE
T ss_conf 970439899598998888234288654288979999999999985--785------789978999999999985889885
Q ss_pred EEEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHH---H--HHH-------HHC-C------CCCEEECCCCHHHHH
Q ss_conf 16741660245655666---316897100454202677---5--266-------640-8------764030568814789
Q gi|254780486|r 93 MLYFGSGYAANMAILST---LPQATDLIVYDKLVHASI---R--EGI-------NSG-K------AQAIAIPHNNINSFA 150 (381)
Q Consensus 93 al~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi---~--~g~-------~ls-~------a~~~~f~HnD~~~Le 150 (381)
+.+++||..||..++.. .+++..+|-.+..-|... . .|. ..+ + .....++.||+++|+
T Consensus 109 v~f~~SGsEA~e~AiklAR~~tgr~~ii~~~g~YHG~~~~~~~~~~~~~~~~~~p~~~g~p~~~~~~~~~~~~nd~~~l~ 188 (425)
T PRK06942 109 VRMVSSGTEATMSALRLARGFTGRSRIVKFEGCYHGHADSLLVKAGSGLLTFGNPTSAGVPADVAKHTTVLEYNNVAALE 188 (425)
T ss_pred EEEECCHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH
T ss_conf 98738879999999999610347986531234514774102121378765558886568876545766466767688899
Q ss_pred HHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCE-EEEEHHCCCCCC
Q ss_conf 9764310002478607971462157661346----89999986313608986131122234777640-110000134652
Q gi|254780486|r 151 ENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKG-LTHIIEERNNVI 225 (381)
Q Consensus 151 ~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G-~~~~~~~~~~~i 225 (381)
+.+.++. .....|++|.|.+..|-+.| |+++++||++||++||+||++ +|+ ++|.+ .++++++.||++
T Consensus 189 ~~~~~~~----~~iAAvI~EPi~g~~G~i~p~~~yl~~lr~lc~~~gilLI~DEV~-TGf--R~g~~~a~~~~gv~PDi~ 261 (425)
T PRK06942 189 EAFAAFG----GEIAAVIVEPVAGNMNLVRGTPEFLNALRALCTKHGAVLIFDEVM-CGF--RVALGGAQQHYGITPDLT 261 (425)
T ss_pred HHHHHCC----CCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCC-CCC--CCCCCHHHHHHCCCCCEE
T ss_conf 9998438----966899955644778750289899999999861378389997462-574--067653876218998799
Q ss_pred CCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEEC-CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH-HHHH
Q ss_conf 1001346565302---6752451001000012110000-135775025789887898862710224789999999-9876
Q gi|254780486|r 226 VMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIY-TTSPSPILAVVACEALKLIKRKPALHKSLLQLINIT-DKIA 300 (381)
Q Consensus 226 v~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~if-st~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~-~~~~ 300 (381)
||+|++|+ | |.+++++++++.+...+.-+.. |-+.+|+.|+|++++|+++++++ +.+++.+..+++ +.+.
T Consensus 262 ---t~gK~igg-G~Pi~Av~g~~eim~~~~~~g~~~h~gTf~gnp~a~AAalatL~~~~~~~-~~~~~~~~g~~L~~gl~ 336 (425)
T PRK06942 262 ---CLGKVIGG-GMPAAAFGGRRDIMAHLAPLGGVYQAGTLSGNPIAVAAGLKTLRLIQAPG-FYDALAAQTRRLADGLA 336 (425)
T ss_pred ---EEHHHCCC-CCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHH
T ss_conf ---87100579-88702102599999750678887227899878799999999999984567-99999999999999999
Q ss_pred --HCCCCCC----CCCCEEEEEECC-------------HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCC
Q ss_conf --4179789----989728999589-------------799999999999779189862288888887039996287899
Q gi|254780486|r 301 --NKKIGFS----SQSHIQSIVIGD-------------NKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVD 361 (381)
Q Consensus 301 --~~~~g~~----~~s~I~~v~~gd-------------~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t 361 (381)
....+++ ....+..+.+.+ ......+...|+++||+..+-.+ -+..++..||
T Consensus 337 ~~~~~~g~~~~~~g~gs~f~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Gv~~~p~~~---------~~~f~s~aHt 407 (425)
T PRK06942 337 AEARAAGVPFAADSIGGMFGLYFTERVPTSFAEVTKSDVERFNRFFHLMLDEGVYFAPSAY---------EAGFVSSTHD 407 (425)
T ss_pred HHHHHCCCCEEEEEECCEEEEEECCCCCCCHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCH---------HCCCCCCCCC
T ss_conf 9999779988996537647998689999999999855499999999999978967798524---------2176230379
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999998873
Q gi|254780486|r 362 EPTIVKLFDILPQIISEG 379 (381)
Q Consensus 362 ~edi~~~~~~l~~v~~E~ 379 (381)
++|||+.+++++++++++
T Consensus 408 ~~did~~l~a~~~a~~~l 425 (425)
T PRK06942 408 DAVLDATLDAARRAFAAL 425 (425)
T ss_pred HHHHHHHHHHHHHHHHHC
T ss_conf 999999999999999739
No 44
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=4.9e-34 Score=232.32 Aligned_cols=340 Identities=14% Similarity=0.207 Sum_probs=229.8
Q ss_pred HHHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CC
Q ss_conf 9975983999289768980344---656677988999999999986378688722443688589999999984012--88
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF--GF 90 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~--g~ 90 (381)
-+++|.|.++.+|++||||.|. .-||- .||+|.+|+.++++ +..... .+. -.++...+|-++|+++. +.
T Consensus 34 ~rg~G~~l~D~dG~~YlD~~sg~~~~~lGH-~~p~v~~Ai~~Q~~-~l~~~~-~~~---~~~~~~~elAe~L~~~~P~~l 107 (467)
T PRK07030 34 KRGEGVWLEDFEGKRYLDAVSSWWVNVFGH-ANPRINQRIKDQVD-QLEHVI-LAG---FSHQPVIELSERLVKITPAGL 107 (467)
T ss_pred EECCCCEEEECCCCEEEECCCCHHHHCCCC-CCHHHHHHHHHHHH-HCCCCC-CCC---CCCHHHHHHHHHHHHHCCCCC
T ss_conf 936369899799999999454388634148-96999999999997-577724-577---687799999999997388886
Q ss_pred CCEEEECCCCHHHHHHHHHH---------CCCCCCCCHHHHCCHHHHHHHHHCCCC------------C--EEECC----
Q ss_conf 85167416602456556663---------168971004542026775266640876------------4--03056----
Q gi|254780486|r 91 EKMLYFGSGYAANMAILSTL---------PQATDLIVYDKLVHASIREGINSGKAQ------------A--IAIPH---- 143 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~l---------~~~~d~ii~D~~~HaSi~~g~~ls~a~------------~--~~f~H---- 143 (381)
+.+++++||..||.+++..- .++..+|-.+..-|.+-.-+.-+++.. . ++++.
T Consensus 108 ~~v~f~~SGSEAvE~AiKlAr~y~~~~g~~gr~~iis~~~sYHG~T~ga~s~~~~~~~~~~~~p~~~~~~~~p~p~~~~~ 187 (467)
T PRK07030 108 DRVFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETIAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLR 187 (467)
T ss_pred CEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCC
T ss_conf 87998378489999999999999998089887079873373434217777634870114787787888667589864356
Q ss_pred -----------CCHHHHHHHHHHHHHCCCCCCCEEEECCC-CCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCC
Q ss_conf -----------88147899764310002478607971462-157661346----89999986313608986131122234
Q gi|254780486|r 144 -----------NNINSFAENINKWRKSGGKGFPWIVVESI-YSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVC 207 (381)
Q Consensus 144 -----------nD~~~Le~~l~~~~~~~~~~~~~vv~egv-~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~ 207 (381)
+..++||+.+.+ .++....|++|.+ -+-.|.+.| |++++++|++||++||+||++ +| +
T Consensus 188 ~~g~~~~~~~~~~~~~le~~l~~----~~~~iAAvi~EPiiqg~GG~~~~~~~yl~~lr~lc~~~giLlI~DEV~-tG-f 261 (467)
T PRK07030 188 PEGMSWEEHSRNMFAHMEQTLAE----HHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVHLIHDEIA-VG-F 261 (467)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH----CCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCE-EC-C
T ss_conf 67888899999999999999984----799746999823233679972799899999999997559468725003-17-8
Q ss_pred CCCCCE-EEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCC---CCCCEE--CCCCCCCCHHHHHHHHHHH
Q ss_conf 777640-1100001346521001346565302---675245100100001---211000--0135775025789887898
Q gi|254780486|r 208 GPLGKG-LTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLIN---YAKPFI--YTTSPSPILAVVACEALKL 278 (381)
Q Consensus 208 G~~G~G-~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~---~~~~~i--fst~l~P~~~aaa~aal~~ 278 (381)
|++|+. .++++++.|+++ |++|++|+.. |.+++++++.+.+.. ...++. +|-+.+|..|+|++++|++
T Consensus 262 GRTG~~fa~e~~gv~PDii---t~aKgl~gG~~Pl~av~~~~~I~~~~~~~~~~~~~~~Hg~Ty~GnPlacAAala~L~i 338 (467)
T PRK07030 262 GRTGTMFACEQAGIRPDFL---CLSKALTGGYLPLAAVLTTDTVYQAFYDDYPTLRAFLHSHSYTGNPLACAAALATLDI 338 (467)
T ss_pred CCCCCCCCCCCCCCCCCEE---EEECCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 6245853200567899889---9704311687753899874899987632565555767588999799999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHC--CCC----CCCCCCEEEEEEC-----------CHHHHHHHHHHHHHCCEEEEEEC
Q ss_conf 862710224789999999987641--797----8998972899958-----------97999999999997791898622
Q gi|254780486|r 279 IKRKPALHKSLLQLINITDKIANK--KIG----FSSQSHIQSIVIG-----------DNKSCLNIAKNLQKKGFDIRAIR 341 (381)
Q Consensus 279 l~~~~~~~~~l~~~~~~~~~~~~~--~~g----~~~~s~I~~v~~g-----------d~~~a~~~~~~L~~~Gi~v~~i~ 341 (381)
++++. +.++.++..+++.+.... ..+ +.+..-+..|.+- +...+..+.+.++++|+++.+.
T Consensus 339 i~~e~-l~~~~~~~g~~l~~~l~~l~~~p~VgdVRG~GL~~giElv~d~~t~~p~~~~~~~~~~v~~~~~~~G~l~~~~- 416 (467)
T PRK07030 339 FEQDN-VIEANRALARRMAEATAHLADHPHVAEVRQTGMALAIEMVQDKASKTPYPWQERRGLKVYQHALERGALLRPL- 416 (467)
T ss_pred HHHCC-HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEC-
T ss_conf 99768-9999999999999999987079975888347519999970378767888546679999999999789889734-
Q ss_pred CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 88888887039996287899999999999999998873
Q gi|254780486|r 342 PPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 342 ~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
| ..|||+|+...|++|||+++++|++++++-
T Consensus 417 ------g-nvi~~~PPL~it~~eid~~~~~l~~al~~a 447 (467)
T PRK07030 417 ------G-SVVYFLPPYVITPEQIDFLAEVASEGIDIA 447 (467)
T ss_pred ------C-CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf ------9-999997992789999999999999999999
No 45
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=4.8e-35 Score=238.59 Aligned_cols=331 Identities=16% Similarity=0.228 Sum_probs=238.0
Q ss_pred HHHHHCCCEEEECCCCEEEECCCCCC---CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 99997598399928976898034465---667798899999999998637868872244368858999999998401288
Q gi|254780486|r 14 QKIKSKGRHRQLLRRQDIWDFTSHDY---LALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF 90 (381)
Q Consensus 14 ~~~~~~g~~~~~~~~~~~l~f~s~dY---LGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~ 90 (381)
.-.+++|.|.++.||+++|||.|.-. ||- +||+|++++.+++++.+.. +..+ .++...+|.++|++..+.
T Consensus 14 ~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~Ai~~ql~~~~~~----~~~~--~~~~~~~la~~l~~~~~~ 86 (377)
T PRK02936 14 EIVKGKGTKVIDNNGKQYLDFTSGIAVCNLGH-CHPTVTKAVQEQLDDIWHV----SNLF--TNSLQEEVASLLTENSAG 86 (377)
T ss_pred CEEEEECCEEEECCCCEEEECCCCHHHHHCCC-CCHHHHHHHHHHHHHCCCC----CCHH--CCHHHHHHHHHHHCCCCC
T ss_conf 77984639999598799999662988601058-9799999999998657886----6201--048999999973206887
Q ss_pred CCEEEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHHHHHHHHCC------------CCCEEECCCCHHHHHHHHHH
Q ss_conf 8516741660245655666---31689710045420267752666408------------76403056881478997643
Q gi|254780486|r 91 EKMLYFGSGYAANMAILST---LPQATDLIVYDKLVHASIREGINSGK------------AQAIAIPHNNINSFAENINK 155 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi~~g~~ls~------------a~~~~f~HnD~~~Le~~l~~ 155 (381)
+.+++++||..||.+++.. ..++.-+|-.+.--|.+-.-+..+++ ..+..++.||++.+++.+..
T Consensus 87 ~~v~f~~sGsEAve~AiklAr~~tgr~~ii~~~~~yHG~T~ga~s~t~~~~~~~~~~~~~~~~~~~p~~d~~~l~~~~~~ 166 (377)
T PRK02936 87 DLVFFCNSGAEANEAALKLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFLHVPFNDIKALEEVMNE 166 (377)
T ss_pred CEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHHCCCC
T ss_conf 88999687778999999998875599879998785511443200105874334577899998144674589999851689
Q ss_pred HHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-EEEHHCCCCCCCCCCC
Q ss_conf 10002478607971462157661346----899999863136089861311222347776401-1000013465210013
Q gi|254780486|r 156 WRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL-THIIEERNNVIVMHSC 230 (381)
Q Consensus 156 ~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~-~~~~~~~~~~iv~~Tl 230 (381)
....|++|.|.+..|.+.| |++++++|++||++||+||++ +| +|++|+.. ++++++.||++ +|
T Consensus 167 -------~iAavi~EPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~-tG-fGRtG~~~a~e~~gv~PDii---~~ 234 (377)
T PRK02936 167 -------EVAAVMLEVVQGEGGVIPADLSFLQEVQTLCKKFGALLIIDEVQ-TG-IGRTGTLFAYEQFGLEPDIV---TV 234 (377)
T ss_pred -------CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCC-CC-CCCCCCCCHHHHCCCCCCEE---EE
T ss_conf -------67899997876788976899999999999999829845712211-27-76556720364449887678---86
Q ss_pred CCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-H--CCC
Q ss_conf 46565302---67524510010000121100001357750257898878988627102247899999999876-4--179
Q gi|254780486|r 231 SKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIA-N--KKI 304 (381)
Q Consensus 231 sKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~-~--~~~ 304 (381)
||++|+ | |.+++++++.+.+.....+. |-+.+|..|++++++|+++++++ +.++.++...++.+.. . ...
T Consensus 235 gK~l~~-G~P~sav~~~~~i~~~~~~~~~~~--T~~gnpl~~aaa~a~L~~i~~~~-l~~~~~~~g~~l~~~L~~~~~~~ 310 (377)
T PRK02936 235 AKGLGN-GIPVGAMIGKKELGSAFTAGSHGS--TFGGNYLAMAAAKEVLQVIKQPS-FLEEVQEKGEYFLQKLQEELQHV 310 (377)
T ss_pred EHHHCC-CCCCCCEECCHHHHHCCCCCCCCC--CCCCCHHHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 201027-898733303287763037899888--89859999999999999985111-99999999999999999984369
Q ss_pred C----CCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 7----89989728999589799999999999779189862288888887039996287899999999999999998
Q gi|254780486|r 305 G----FSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 305 g----~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
+ +.+..-...+.+.++ +.++.+.++++|+++.+ .+...||+.|+...|++|+++++++|++++
T Consensus 311 ~~i~~vRG~Gl~~gie~~~~--~~~~~~~~~~~Gll~~~-------~g~~~ir~~PpL~it~~ei~~~l~~l~~aL 377 (377)
T PRK02936 311 ECVKNIRGKGLMIGIECTHE--VAPFIEQLREEGLLVLQ-------AGPNVIRLLPPLIVTKEELDQAVYMLKKVL 377 (377)
T ss_pred CCEEEEEECCEEEEEEECCC--HHHHHHHHHHCCEEEEE-------CCCCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 96677125569999997785--99999999969929943-------689989996990288999999999999869
No 46
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.8e-34 Score=235.04 Aligned_cols=343 Identities=14% Similarity=0.180 Sum_probs=229.4
Q ss_pred HHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC---C
Q ss_conf 975983999289768980344---6566779889999999999863786887224436885899999999840128---8
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG---F 90 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g---~ 90 (381)
+++|.|.++.||++||||.|. .-||- +||+|.+|+.++++ ++.. ++ ..........+|.++|+++.. .
T Consensus 44 ra~G~~l~D~dG~~ylD~~sg~~~~~lGh-~~p~v~~Ai~~Q~~-~l~h-~~---~~~~~~~~~~~lae~L~~~~p~~~~ 117 (446)
T PRK06058 44 RAGGGIVEDVDGNRLIDLGSGIAVTTVGN-SAPAVVDAVRAQVA-RFTH-TC---FMVTPYEGYVAVAEQLNRLTPGDHE 117 (446)
T ss_pred EEECCEEEECCCCEEEEECCCHHHHHCCC-CCHHHHHHHHHHHH-HCCC-CC---CCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 70319899699698878033477512178-98999999999997-4357-22---4666547899999999985787666
Q ss_pred CCEEEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHHHHHHHHCCC-------------CC----EEECCCCH----
Q ss_conf 8516741660245655666---316897100454202677526664087-------------64----03056881----
Q gi|254780486|r 91 EKMLYFGSGYAANMAILST---LPQATDLIVYDKLVHASIREGINSGKA-------------QA----IAIPHNNI---- 146 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi~~g~~ls~a-------------~~----~~f~HnD~---- 146 (381)
....+++||..||.+++.. ..++..+|-.+..-|.+...+..+++. .+ ..|+++|.
T Consensus 118 ~~~~~~~SGSEAvE~AiKlAR~~tgr~~iis~~~~YHG~t~~~~~~t~~~~~~~~~~~p~~p~~~~~p~~~~~~~~~~~~ 197 (446)
T PRK06058 118 KRSALFNSGAEAVENAVKIARSYTGKPAVVAFDHAYHGRTNLTMALTAKSMPYKSGFGPFAPEVYRAPLSYPYRDGLLDK 197 (446)
T ss_pred CEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
T ss_conf 26772488668999999999975699879997698688987302112788664346788999845668887766633355
Q ss_pred -------HHHHHHHHHHHHC-CCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCE-
Q ss_conf -------4789976431000-2478607971462157661346----89999986313608986131122234777640-
Q gi|254780486|r 147 -------NSFAENINKWRKS-GGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKG- 213 (381)
Q Consensus 147 -------~~Le~~l~~~~~~-~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G- 213 (381)
...++.+...... .++....|++|.|.+-.|.+.| |+++++||++||++||+||++ +| +|++|..
T Consensus 198 ~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~-TG-fGRtG~~f 275 (446)
T PRK06058 198 ELATDGEEAAARAITVIDKQIGADNLAAVIIEPIQGEGGFIVPAEGFLPALLDWCRENGVVFIADEVQ-TG-FARTGAMF 275 (446)
T ss_pred CCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCE-EC-CCCCCCCH
T ss_conf 62223899999999999974389977999972776888986798899999999998749258704312-06-77556604
Q ss_pred EEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 1100001346521001346565302---6752451001000012110000135775025789887898862710224789
Q gi|254780486|r 214 LTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLL 290 (381)
Q Consensus 214 ~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~ 290 (381)
.++++++.||++ ||+|++|+ | +.+++++++.+......-+ .|-+.+|..|++++++|++++++. +.++.+
T Consensus 276 a~e~~gv~PDiv---t~gKgl~g-G~Plsav~~~~ei~~~~~~~~~g--~T~~Gnpla~aaala~L~~i~~e~-l~~~v~ 348 (446)
T PRK06058 276 ACEHEGIVPDLI---TTAKGIAG-GLPLSAVTGRAEIMDAPHVGGLG--GTYGGNPVACAAALAAIETIESDD-LVARAR 348 (446)
T ss_pred HHHHCCCCCCEE---EECHHCCC-CCCCCCCCCCHHHHCCCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHCC-HHHHHH
T ss_conf 565358899854---42210137-88851000469886067678767--788989899999999999998656-999999
Q ss_pred HHHHHHHH-HHH--CCCC----CCCCCCEEEEEE-------CCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEC
Q ss_conf 99999998-764--1797----899897289995-------897999999999997791898622888888870399962
Q gi|254780486|r 291 QLINITDK-IAN--KKIG----FSSQSHIQSIVI-------GDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISI 356 (381)
Q Consensus 291 ~~~~~~~~-~~~--~~~g----~~~~s~I~~v~~-------gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v 356 (381)
+..+++.+ +.. ...+ +.+..-+..|.+ .++..+..+..+++++|+++.+.. .....|||.|
T Consensus 349 ~~g~~l~~~L~~l~~~~~~i~dvRG~GLm~gielv~~~~~~~~~~~~~~v~~~~~~~Gll~~~~g-----~~g~~lrl~P 423 (446)
T PRK06058 349 QIERLVTDRLGALQAEDDRIGDVRGRGAMIAIELVKSGTTEPDAELTKALAAAAHAAGVIVLTCG-----TYGNVIRLLP 423 (446)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEECCC-----CCCCEEEEEC
T ss_conf 99899999999998609978877645469999993088889598999999999997898896258-----8999899979
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 87899999999999999998873
Q gi|254780486|r 357 TLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 357 ~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
+...|++|||+++++|+++++|+
T Consensus 424 PL~it~~eid~~l~il~~al~ev 446 (446)
T PRK06058 424 PLVISDELLSEGLDVLEAALADL 446 (446)
T ss_pred CEECCHHHHHHHHHHHHHHHHHC
T ss_conf 94578999999999999999749
No 47
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=3.3e-34 Score=233.40 Aligned_cols=341 Identities=15% Similarity=0.220 Sum_probs=231.2
Q ss_pred HHHHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--C
Q ss_conf 99975983999289768980344---656677988999999999986378688722443688589999999984012--8
Q gi|254780486|r 15 KIKSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF--G 89 (381)
Q Consensus 15 ~~~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~--g 89 (381)
-.+++|.|.++.+|++||||.+. .-||- +||+|.+++.++++ +...-+ -+.+ +++...+|-++|.++. +
T Consensus 28 i~ra~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~Ai~~q~~-~l~~~~-~~~~---~~~~~~~lA~~L~~~~p~~ 101 (421)
T PRK05964 28 IVRAEGAYLYLADGRELIDAISSWWVATHGH-NHPHIDAAIREQLD-RLDHVM-FAGF---THEPAERLAKRLVALTPGG 101 (421)
T ss_pred EEEEECCEEEECCCCEEEECCCCHHHHCCCC-CCHHHHHHHHHHHH-HCCCCC-CCCC---CCHHHHHHHHHHHHHCCCC
T ss_conf 9953538899799999999360687402689-98999999999997-578754-6875---7589999999999847877
Q ss_pred CCCEEEECCCCHHHHHHHHHH--------CCCCCCCCHHHHCCHHHHHHHHHC--------------CCCCEEECCC---
Q ss_conf 885167416602456556663--------168971004542026775266640--------------8764030568---
Q gi|254780486|r 90 FEKMLYFGSGYAANMAILSTL--------PQATDLIVYDKLVHASIREGINSG--------------KAQAIAIPHN--- 144 (381)
Q Consensus 90 ~e~al~~~sG~~An~~~i~~l--------~~~~d~ii~D~~~HaSi~~g~~ls--------------~a~~~~f~Hn--- 144 (381)
.+.+++++||..||.+++..- .++.-+|-.+..-|.+...++-++ .....+|+++
T Consensus 102 ~~~v~f~~SGsEA~e~AiKlA~~y~~~~g~~r~~ii~~~~~yHG~T~~a~s~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 181 (421)
T PRK05964 102 LDHVFFSDSGSVAVEVALKMALQYWRNRGEPRSRFLSLRGGYHGDTLGTMSVGMHGLFNATYGPLLFQVLALPVPRDYEQ 181 (421)
T ss_pred CCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCEECCCCCCCCH
T ss_conf 58799947813699999999999998639975189997388689851343235753345788888888765589986338
Q ss_pred -CHHHHHHHHHHHHHCCCCCCCEEEECC-CCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-EEE
Q ss_conf -814789976431000247860797146-2157661346----899999863136089861311222347776401-100
Q gi|254780486|r 145 -NINSFAENINKWRKSGGKGFPWIVVES-IYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL-THI 217 (381)
Q Consensus 145 -D~~~Le~~l~~~~~~~~~~~~~vv~eg-v~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~-~~~ 217 (381)
+.+.|++.+++. +.....|++|. +.+..|.+.| ++++++||++||++||+||++ +| +|++|... .++
T Consensus 182 ~~~~~le~~~~~~----~~~iAAvi~EP~iqg~GG~~~~p~~y~~~lr~lc~~~gillI~DEV~-tG-fGRtG~~fa~e~ 255 (421)
T PRK05964 182 AYLDALEALLEKH----AGEIAAVIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIA-TG-FGRTGTLFACEQ 255 (421)
T ss_pred HHHHHHHHHHHHC----CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEECCCCC-CC-CCCCCCCCCCCC
T ss_conf 8999999999747----99778999978846789976788899999988710068046512110-26-875678875430
Q ss_pred HHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCC--CCCCEEC--CCCCCCCHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 001346521001346565302---675245100100001--2110000--135775025789887898862710224789
Q gi|254780486|r 218 IEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLIN--YAKPFIY--TTSPSPILAVVACEALKLIKRKPALHKSLL 290 (381)
Q Consensus 218 ~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~--~~~~~if--st~l~P~~~aaa~aal~~l~~~~~~~~~l~ 290 (381)
+++.||++ |++|++++.+ |.+++++++.+.+.. ..+++.+ |-+.+|..|++++++|+++++++ +.++.+
T Consensus 256 ~gv~PDiv---t~gKgl~gG~~Pisav~~~~~i~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~i~~~~-l~~~~~ 331 (421)
T PRK05964 256 AGVSPDIM---CLSKGLTGGYLPLAATLCTAEIFDAFYSDDRAKAFMHSPSYTANPLACAAANASLDLFEDEP-VLERVA 331 (421)
T ss_pred CCCCCCEE---EECCCCCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCH-HHHHHH
T ss_conf 02589878---87220357876248999858999763167877640037888889699999999999996451-999999
Q ss_pred HHHHHHHHHHHC--CCC----CCCCCCEEEEEE---CCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCC
Q ss_conf 999999987641--797----899897289995---89799999999999779189862288888887039996287899
Q gi|254780486|r 291 QLINITDKIANK--KIG----FSSQSHIQSIVI---GDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVD 361 (381)
Q Consensus 291 ~~~~~~~~~~~~--~~g----~~~~s~I~~v~~---gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t 361 (381)
+..+++.+.... ... +.+..-+..+.+ .+...+..+.+.++++|+++.+. + ..|||.|+...|
T Consensus 332 ~~g~~l~~~L~~l~~~~~I~dvRG~GL~~~ie~~~~~~~~~~~~i~~~~~~~Glli~~~-------g-n~ir~~PpL~it 403 (421)
T PRK05964 332 ALSAGLTEGLEPFRDLPRVADVRVLGAIGAVELDRPDDGRIGPALTAAFLDRGVLLRPL-------G-NTIYLMPPYIIT 403 (421)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEC-------C-CEEEEECCCCCC
T ss_conf 99999999999743599767641046299999725786799999999999789099966-------9-999997893689
Q ss_pred HHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999998873
Q gi|254780486|r 362 EPTIVKLFDILPQIISEG 379 (381)
Q Consensus 362 ~edi~~~~~~l~~v~~E~ 379 (381)
++|||+++++|+++++|+
T Consensus 404 ~~eid~~~~~l~~al~ev 421 (421)
T PRK05964 404 PEELARITDAIVEVADEL 421 (421)
T ss_pred HHHHHHHHHHHHHHHHHC
T ss_conf 999999999999999629
No 48
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=1.1e-34 Score=236.29 Aligned_cols=333 Identities=17% Similarity=0.251 Sum_probs=234.9
Q ss_pred HHHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-
Q ss_conf 9975983999289768980344---656677988999999999986378688722443688589999999984012888-
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE- 91 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e- 91 (381)
.+++|.|.++.+|++||||.|. .-||- +||+|.+++.+++++...+ +..+ .++...+|.++|++.++.+
T Consensus 30 ~~a~G~~l~D~~G~~ylD~~~g~~~~~lGh-~~p~i~~ai~~q~~~l~~~----~~~~--~~~~~~~lae~L~~~~~~~~ 102 (398)
T PRK03244 30 VRGEGAVVTDVDGKEYLDLLGGIAVNALGH-AHPAVVEAVTRQLATLGHV----SNLF--ATEPQIALAERLVALLGAPE 102 (398)
T ss_pred EEEECCEEEECCCCEEEECCCCHHHCCCCC-CCHHHHHHHHHHHHHCCCC----CCCC--CCHHHHHHHHHHHHHCCCCC
T ss_conf 984749999799899999670887542238-9899999999999754777----5653--58699999999998608996
Q ss_pred --CEEEECCCCHHHHHHHHH--HCCCCCCCCHHHHCCHHHHHHHHHCC------------CCCEEECCCCHHHHHHHHHH
Q ss_conf --516741660245655666--31689710045420267752666408------------76403056881478997643
Q gi|254780486|r 92 --KMLYFGSGYAANMAILST--LPQATDLIVYDKLVHASIREGINSGK------------AQAIAIPHNNINSFAENINK 155 (381)
Q Consensus 92 --~al~~~sG~~An~~~i~~--l~~~~d~ii~D~~~HaSi~~g~~ls~------------a~~~~f~HnD~~~Le~~l~~ 155 (381)
.+++++||..||.+++.. ..++..+|-.+..-|........+++ ..+..+++||.+.|++.+..
T Consensus 103 ~~kvff~~SGsEA~E~AlKlAr~tgr~~Iis~~~sYHG~T~ga~s~tg~~~~~~~~~p~~~~~~~~p~~d~~~l~~~~~~ 182 (398)
T PRK03244 103 GARVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYGDVDALAAAVDD 182 (398)
T ss_pred CCEEEEECCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHCC
T ss_conf 56799718677899999999998299879998387768876542336885312346788787277157866899997389
Q ss_pred HHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-EEEHHCCCCCCCCCCC
Q ss_conf 10002478607971462157661346----899999863136089861311222347776401-1000013465210013
Q gi|254780486|r 156 WRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL-THIIEERNNVIVMHSC 230 (381)
Q Consensus 156 ~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~-~~~~~~~~~~iv~~Tl 230 (381)
....|++|.|.+..|.+.| |++++++|++||++||+||++ +| +|++|... .+++++.||++ |+
T Consensus 183 -------~iAAii~EPiqg~gG~~~~~~~fl~~l~~lc~~~gillI~DEV~-tG-fGRtG~~fa~e~~~v~PDIv---~~ 250 (398)
T PRK03244 183 -------DTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQ-TG-IGRTGAWFAHQHDGVTPDVV---TL 250 (398)
T ss_pred -------CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEECCCCC-CC-CCCCCCCCHHHHCCCCCCEE---EE
T ss_conf -------85899985876889985688889999999985734536666212-48-77667861565337999889---97
Q ss_pred CCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCC-
Q ss_conf 46565302---67524510010000121100001357750257898878988627102247899999999876417978-
Q gi|254780486|r 231 SKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIANKKIGF- 306 (381)
Q Consensus 231 sKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~~g~- 306 (381)
+|++|+ | |.+++++++.+.+.....+ .|-+.+|..|++++++|+++++++ +.++..+..+++.+.. ..+..
T Consensus 251 gK~lgg-G~P~sa~~~~~~~~~~~~~~~h~--~T~~gnpl~~aaa~a~L~~i~~~~-l~~~v~~~g~~l~~~L-~~l~~~ 325 (398)
T PRK03244 251 AKGLGG-GLPIGACLAFGPAADLLTPGLHG--STFGGNPVACAAALAVLRVIADEG-LLENAERLGKQLRAGI-EALGHP 325 (398)
T ss_pred CCCCCC-CCCCEEEEECHHHHHHCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHH-HHCCCC
T ss_conf 320248-87616889718888641788767--478989899999999999997557-9999999999999999-854898
Q ss_pred -----CCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf -----99897289995897999999999997791898622888888870399962878999999999999999988738
Q gi|254780486|r 307 -----SSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 307 -----~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
.+..-+..|.+. ...+..+...++++|+++.+. +...|||.|+...|++|||.++++|+++++|-.
T Consensus 326 ~i~~VRG~Gl~~giel~-~~~~~~~~~~~~~~Gll~~~~-------g~n~ir~~PPl~it~~eid~~~~~l~~~L~~~a 396 (398)
T PRK03244 326 LVDHVRGRGLLLGIVLT-APVAKAVEAAAREAGFLVNAP-------APDVIRLAPPLIITDAQVDAFVAALPAILDAAA 396 (398)
T ss_pred CEEEEEEEEEEEEEEEC-CCHHHHHHHHHHHCCCEECCC-------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 61410012689999966-731999999999689199318-------999799949957899999999999999999985
No 49
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=100.00 E-value=1.7e-34 Score=235.09 Aligned_cols=331 Identities=16% Similarity=0.217 Sum_probs=233.0
Q ss_pred HHHCCCEEEECCCCEEEECCCC-CCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCE
Q ss_conf 9975983999289768980344-656677-98899999999998637868872244368858999999998401288851
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSH-DYLALS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKM 93 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~-dYLGl~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~a 93 (381)
.+++|.|.++.||++||||.|. --+.|. +||+|++|+.+++++ ..+ .++.+ ..+...++.++++++.+.+.+
T Consensus 27 ~rg~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~-~~~---~~~~~--~~~~~~~~~e~l~~l~~~~~v 100 (396)
T PRK04073 27 SEAEGVWVKDPEGNKYMDMLSAYSAVNQGHRHPKIIQALKDQADK-VTL---TSRAF--HSDQLGPWYEKVAKLTGKDMV 100 (396)
T ss_pred EEEECCEEEECCCCEEEEECCCHHHHHCCCCCHHHHHHHHHHHHH-CCC---CCCCC--CCHHHHHHHHHHHHHCCCCEE
T ss_conf 973659999898999999451788763037979999999999841-787---66532--434789999999975283648
Q ss_pred EEECCCCHHHHHHHHHHC-----------CCCCCCCHHHHCCHHHHHHHHHCCC------------CCEEECCCCHHHHH
Q ss_conf 674166024565566631-----------6897100454202677526664087------------64030568814789
Q gi|254780486|r 94 LYFGSGYAANMAILSTLP-----------QATDLIVYDKLVHASIREGINSGKA------------QAIAIPHNNINSFA 150 (381)
Q Consensus 94 l~~~sG~~An~~~i~~l~-----------~~~d~ii~D~~~HaSi~~g~~ls~a------------~~~~f~HnD~~~Le 150 (381)
++++||..||.+++..-- ++..+|-.+.--|.+...++.+++. .+..++.||++.|+
T Consensus 101 ~f~~sGseAvE~AlklAr~~~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~p~~~~~~~~p~~d~~~l~ 180 (396)
T PRK04073 101 LPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGNFHGRTMAAVSLSSEAEYKRGFGPMLPGIKKIPYGDVEALK 180 (396)
T ss_pred EECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEECCCCHHHHHH
T ss_conf 96187888999999999999876237888987799977750045320522267643345778999982325752166788
Q ss_pred HHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCE-EEEEHHCCCCCC
Q ss_conf 9764310002478607971462157661346----89999986313608986131122234777640-110000134652
Q gi|254780486|r 151 ENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKG-LTHIIEERNNVI 225 (381)
Q Consensus 151 ~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G-~~~~~~~~~~~i 225 (381)
+.+.. ....|++|.|-+..|.+.| |++++++|++||++||+||++ +| +|++|.. ..+++++.||++
T Consensus 181 ~~~~~-------~~AAvi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~-tG-fGRtG~~fa~e~~gv~PDiv 251 (396)
T PRK04073 181 AAITP-------NTAAFLVEPIQGEAGINIPPEGFLKAARELCKEENVLFIADEIQ-TG-LGRTGKLFACDWDNVKPDMY 251 (396)
T ss_pred HHCCC-------CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEECCCCE-EC-CCCCCCCCCEECCCCCCCEE
T ss_conf 61489-------75699998987778977899899999999999839935266341-07-88657630010046898801
Q ss_pred CCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 1001346565302---6752451001000012110000135775025789887898862710224789999999987641
Q gi|254780486|r 226 VMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIANK 302 (381)
Q Consensus 226 v~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~ 302 (381)
||||++|+.. |.+++++++.+.+.....+ .|-+.+|..|++++++|++++++. +.++.++..+++.+.. .
T Consensus 252 ---~~gK~l~gG~~P~~av~~~~~i~~~~~~~~h~--~T~~gnpla~aaa~a~L~~~~~~~-l~~~~~~~g~~l~~~L-~ 324 (396)
T PRK04073 252 ---ILGKALGGGVFPISCVAANRDILGVFTPGSHG--STFGGNPLACAVSIAALDVIEEEK-LPERSLELGEYFKEQL-K 324 (396)
T ss_pred ---ECCCCCCCCCCCEEEEECCHHHHHHCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHH-H
T ss_conf ---02534557877605896078999616689976--054889899999999999998757-9999999999999999-8
Q ss_pred CCC------CCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 797------89989728999589799999999999779189862288888887039996287899999999999999998
Q gi|254780486|r 303 KIG------FSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 303 ~~g------~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
.+. +.+..-+..|.+.++ +..+.++|+++|+++... +...|||+|+...|++|||.++++|++++
T Consensus 325 ~l~~~~i~~vRG~Gl~~giel~~~--~~~~~~~~~~~Gll~~~~-------~~~~ir~~PpL~it~~eid~~l~~l~~~L 395 (396)
T PRK04073 325 EIDNPMIKEVRGRGLFIGVELNEP--ARPYCEALKEEGLLCKET-------HETVIRFAPPLVISKEELDWALEKIKAVL 395 (396)
T ss_pred HCCCCCEEECCCCEEEEEEEECCC--HHHHHHHHHHCCEEEEEC-------CCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 258997487233779999995875--899999999499799527-------99989997993689999999999999985
Q ss_pred H
Q ss_conf 8
Q gi|254780486|r 377 S 377 (381)
Q Consensus 377 ~ 377 (381)
+
T Consensus 396 ~ 396 (396)
T PRK04073 396 S 396 (396)
T ss_pred C
T ss_conf 9
No 50
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=2e-34 Score=234.78 Aligned_cols=342 Identities=15% Similarity=0.186 Sum_probs=235.0
Q ss_pred HHHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--C
Q ss_conf 9975983999289768980344---6566779889999999999863786887224436885899999999840128--8
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG--F 90 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g--~ 90 (381)
.+++|.|.++.||++||||.|. .-||- +||+|.+|+.++++ +.... +.+.+ +++.-.+|.++|+++.+ .
T Consensus 29 ~r~~G~~l~D~dG~~ylD~~~g~~~~~lGH-~~p~v~~Ai~~q~~-~l~~~-~~~~~---~~~~~~~lae~L~~~~p~~~ 102 (423)
T PRK05630 29 TKTDGVFLTLEDGSTVIDAMSSWWSAIHGH-GHPRLKAAAQKQID-TMSHV-MFGGL---THEPAIKLTHKLLNLTGNPF 102 (423)
T ss_pred EEEECCEEEECCCCEEEECCCCHHHHHHCC-CCHHHHHHHHHHHH-HCCCC-CCCCC---CCHHHHHHHHHHHHHHCCCC
T ss_conf 953048899699899998443688761536-99999999999986-57673-46775---76899999999987544776
Q ss_pred CCEEEECCCCHHHHHHHHHH---C------CCCCCCCHHHHCCHHHHHHHHHCCC------------------CCEEECC
Q ss_conf 85167416602456556663---1------6897100454202677526664087------------------6403056
Q gi|254780486|r 91 EKMLYFGSGYAANMAILSTL---P------QATDLIVYDKLVHASIREGINSGKA------------------QAIAIPH 143 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~l---~------~~~d~ii~D~~~HaSi~~g~~ls~a------------------~~~~f~H 143 (381)
+.+++.+||..||.+++..- . ++..+|-.+.--|.+..-..-+++. ..-+++.
T Consensus 103 ~~v~f~~SGsEAvE~AiKlAr~~~~~~g~~~r~~Ii~~~~~yHG~T~ga~s~t~~~~~~~~~~~~~~~~~~~~p~p~~~~ 182 (423)
T PRK05630 103 DHVFYSDSGSVSVEVAIKMALQASKGQGHPERTKLLTWRSGYHGDTFTAMSVCDPENGMHSLWKGTLPEQIFAPAPPVRG 182 (423)
T ss_pred CEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 88996287289999999999999874389876347655585077666454110676665555578898764568998678
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCEEEECCCC-CCCCCHH-H---HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-EEE
Q ss_conf 881478997643100024786079714621-5766134-6---899999863136089861311222347776401-100
Q gi|254780486|r 144 NNINSFAENINKWRKSGGKGFPWIVVESIY-SMDGDKA-P---LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL-THI 217 (381)
Q Consensus 144 nD~~~Le~~l~~~~~~~~~~~~~vv~egv~-Sm~G~~a-p---L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~-~~~ 217 (381)
++.+++++.++......++....|++|.+. +-.|.+. | |++++++|++||++||+||++ +| +||+|+.. .++
T Consensus 183 ~~~~~~~~~l~~l~~~~~~~iAAii~EPi~qg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~-TG-fGRtG~~fa~e~ 260 (423)
T PRK05630 183 SSPQAISEYLDSMELLIDETVSAIIIEPIVQGAGGMRFHDVALIEGVATLCKKHDRFLIVDEIA-TG-FGRTGELFATLS 260 (423)
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCE-EC-CCCCCCCHHHHH
T ss_conf 8878999999999874388725999974677779956798799999998733068058636432-05-874565202765
Q ss_pred HHCCCCCCCCCCCCCCCCC---EEEEEECCCCCCCCCCCC--CCCEE--CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf 0013465210013465653---026752451001000012--11000--0135775025789887898862710224789
Q gi|254780486|r 218 IEERNNVIVMHSCSKALGS---SGALVGSNKIIYDYLINY--AKPFI--YTTSPSPILAVVACEALKLIKRKPALHKSLL 290 (381)
Q Consensus 218 ~~~~~~~iv~~TlsKa~g~---~GG~i~~~~~ii~~l~~~--~~~~i--fst~l~P~~~aaa~aal~~l~~~~~~~~~l~ 290 (381)
+++.||++ |++|++|+ .-|.+++++++.+.+... +..+. +|-+.+|..|++++++|++++++. +.++..
T Consensus 261 ~gV~PDiv---t~gK~l~gG~~Pl~av~~~~~i~~~~~~~~~~~~~~hg~T~~GnPl~~Aaa~a~l~~i~~~~-l~~~~~ 336 (423)
T PRK05630 261 NGVQPDIM---CVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFMANPLACAVSHASLEIIETGM-WQKQVK 336 (423)
T ss_pred CCCCCCEE---EECCHHHCCCCCEEEEEECHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCC-HHHHHH
T ss_conf 69977689---87624328867627997638999754276788765054799978899999999999998478-999999
Q ss_pred HHHHHHHH-HHH-CCC----CCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHH
Q ss_conf 99999998-764-179----789989728999589799999999999779189862288888887039996287899999
Q gi|254780486|r 291 QLINITDK-IAN-KKI----GFSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPT 364 (381)
Q Consensus 291 ~~~~~~~~-~~~-~~~----g~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~ed 364 (381)
+...++.. +.. ... .+.+..-+..|.+.++....++.++++++|+++.+. + ..||+.|+...|+||
T Consensus 337 ~~g~~l~~~L~~L~~~p~V~dVRG~Glm~~vel~~~~~~~~~~~~~~~~Gl~~~~~-------g-~~l~i~PPL~it~ee 408 (423)
T PRK05630 337 RIEAELIAGLSPLRHLPGVADVRVLGAIGVIEMEQNVNVEEATQAALDHGVWIRPF-------G-RLLYVMPPYITTSEQ 408 (423)
T ss_pred HHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHCCCEEEEC-------C-CEEEEECCCCCCHHH
T ss_conf 99999999999870699678773055499999568656999999999699479853-------9-999993893689999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999988
Q gi|254780486|r 365 IVKLFDILPQIIS 377 (381)
Q Consensus 365 i~~~~~~l~~v~~ 377 (381)
|++++++|+++++
T Consensus 409 i~~~~~~l~~alk 421 (423)
T PRK05630 409 CAQICTALHAAVK 421 (423)
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999999999977
No 51
>PRK09792 PLP-dependent GABA aminotransferase; Provisional
Probab=100.00 E-value=5.8e-34 Score=231.83 Aligned_cols=355 Identities=15% Similarity=0.195 Sum_probs=236.5
Q ss_pred CCCCHHHHHHHHHHHH-------------HHCCCEEEECCCCEEEECCCC-CCCCCC-CCHHHHHHHHHHHHHHCCCCCC
Q ss_conf 9886578999999999-------------975983999289768980344-656677-9889999999999863786887
Q gi|254780486|r 1 MKNIQMSFYEERLQKI-------------KSKGRHRQLLRRQDIWDFTSH-DYLALS-SSTLLREKILSSLDSKIPIGSG 65 (381)
Q Consensus 1 m~~~~~~~~~~~l~~~-------------~~~g~~~~~~~~~~~l~f~s~-dYLGl~-~~p~v~~a~~~a~~~~~g~~~~ 65 (381)
|+|++ +++++++.. +++|.|.+..||++||||.|. -.+.|. +||+|.+|+.++++ ++...
T Consensus 1 ~~~~~--~~~~~~~~~~~~~~~~~~~~~e~a~G~~l~D~dG~~yLD~~sg~~~~~lGh~~p~v~~Ai~~Q~~-~~~~~-- 75 (421)
T PRK09792 1 MSNNE--FHQRRLSATPRGVGVMCNFFAQSAENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQ-QFTHT-- 75 (421)
T ss_pred CCHHH--HHHHHHHHCCCCCCCCCCEEEEECCCCEEEECCCCEEEEECCCHHHHHHCCCCHHHHHHHHHHHH-HCCCC--
T ss_conf 98589--99999974777658999879997704989969999998926348851006898999999999997-44675--
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHC---CCCCEEEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHHHHHHHHCCC---
Q ss_conf 22443688589999999984012---888516741660245655666---316897100454202677526664087---
Q gi|254780486|r 66 GSRLLCGNYNQHLELEEEAADFF---GFEKMLYFGSGYAANMAILST---LPQATDLIVYDKLVHASIREGINSGKA--- 136 (381)
Q Consensus 66 ~sr~~~G~~~~~~~lE~~lA~~~---g~e~al~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi~~g~~ls~a--- 136 (381)
+... ..++...+|-++|+++. +...+++++||..||.+++.. ..++..+|-.+..-|....-.+.+++-
T Consensus 76 -~~~~-~~~~~~~~Lae~l~~~~p~~~~~~v~f~~SGsEAvE~AiKlAr~~tgr~~ii~~~~sYHG~T~ga~s~tg~~~~ 153 (421)
T PRK09792 76 -AYQI-VPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGRPGVIAFSGGFHGRTYMTMALTGKVAP 153 (421)
T ss_pred -CCCC-CCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCCCC
T ss_conf -5554-46569999999999847767875599857835799999999887529985999817858852303543289764
Q ss_pred ----------CC--EEECC--------CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHC
Q ss_conf ----------64--03056--------88147899764310002478607971462157661346----89999986313
Q gi|254780486|r 137 ----------QA--IAIPH--------NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDY 192 (381)
Q Consensus 137 ----------~~--~~f~H--------nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y 192 (381)
.+ .+|+. ++++.+++.+... ..++....|++|.|-+..|.+.| |++++++|++|
T Consensus 154 ~~~~~~p~~~~~~~~p~p~~~~~~~~~~~~d~~~~~~~~~--~~~~~iAAvi~EPiqg~gG~~~~p~~yl~~lr~lc~~~ 231 (421)
T PRK09792 154 YKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSD--IEAKQVAAIIFEPVQGEGGFNVAPKELVAAIRRLCDEH 231 (421)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHC--CCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHC
T ss_conf 3356788999737807884224666233699999997644--56674589996564577882308989999999999873
Q ss_pred CEEEEECCCCCCCCCCCCCCE-EEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCH
Q ss_conf 608986131122234777640-1100001346521001346565302---675245100100001211000013577502
Q gi|254780486|r 193 DGFIVVDEAHATGVCGPLGKG-LTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPIL 268 (381)
Q Consensus 193 ~~~LivDEah~~Gv~G~~G~G-~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~ 268 (381)
|++||+||++ +| +|++|.. .++++++.||++ ||+|++|+ | +.+++++++++......-+. |-+.+|..
T Consensus 232 gillI~DEV~-tG-fGRtG~~fa~e~~gv~PDii---~~gK~l~g-G~P~~av~~~~~v~~~~~~~~~~~--Tf~Gnpl~ 303 (421)
T PRK09792 232 GIVMIADEVQ-SG-FARTGKLFAMDHYADKPDLM---TMAKSLAG-GMPLSGVVGNANIMDAPAPGGLGG--TYAGNPLA 303 (421)
T ss_pred CCEEEECCCE-EC-CCCCCCCHHHHHHCCCCCEE---EECCCCCC-CCCEEEEEECHHHHCCCCCCCCCC--CCCCCHHH
T ss_conf 9679720221-06-86366522657509998687---64322348-877189997288864678776478--79989899
Q ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH-H--CCCC----CCCCCCEEEEEECC-------HHHHHHHHHHHHHCC
Q ss_conf 57898878988627102247899999999876-4--1797----89989728999589-------799999999999779
Q gi|254780486|r 269 AVVACEALKLIKRKPALHKSLLQLINITDKIA-N--KKIG----FSSQSHIQSIVIGD-------NKSCLNIAKNLQKKG 334 (381)
Q Consensus 269 ~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~-~--~~~g----~~~~s~I~~v~~gd-------~~~a~~~~~~L~~~G 334 (381)
|++++++|++++++. +.++.++..+++.+.. . ...+ +.+..-+..+.+.| ...+..+.+.++++|
T Consensus 304 ~aaa~a~L~ii~~e~-l~~~v~~~g~~l~~~L~~~~~~~p~v~~VRG~Glm~gvel~d~~~~~p~~~~~~~i~~~~~~~G 382 (421)
T PRK09792 304 VAAAHAVLNIIDKES-LCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFNDPQTGEPSAAIAQKIQQRALAQG 382 (421)
T ss_pred HHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCC
T ss_conf 999999999998658-9999999999999999999756998898541418999997578778832999999999999779
Q ss_pred EEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 18986228888888703999628789999999999999999887
Q gi|254780486|r 335 FDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 335 i~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
+++.... .....|||.|+...|++|||+.+++|+++++|
T Consensus 383 ll~~~~g-----~~g~~i~~~PPL~it~~eid~~~~il~~aL~e 421 (421)
T PRK09792 383 LLLLTCG-----AYGNVIRFLYPLTIPDAQFDAAMKILQDALSD 421 (421)
T ss_pred CEEEECC-----CCCCEEEEECCEECCHHHHHHHHHHHHHHHCC
T ss_conf 7899448-----99898999799238899999999999999639
No 52
>PRK06917 hypothetical protein; Provisional
Probab=100.00 E-value=3e-34 Score=233.63 Aligned_cols=349 Identities=14% Similarity=0.177 Sum_probs=231.3
Q ss_pred HHHCCCEEEECCCCEEEECCCCC---CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--C
Q ss_conf 99759839992897689803446---566779889999999999863786887224436885899999999840128--8
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSHD---YLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG--F 90 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~d---YLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g--~ 90 (381)
.|++|.|.++.||++||||.|.- -||- +||+|.+++.++++ +..... .+.+ .++.-.+|.++|+++.. .
T Consensus 18 ~rg~G~~l~D~dG~~ylD~~sg~~~~~lGh-~~p~i~~ai~~q~~-~~~~~~-~~~~---~~~~~~~la~~l~~~~p~~~ 91 (447)
T PRK06917 18 SHGKGVYLYDQNGNKYFDGSSGAVTAGIGH-GVKEIADVIKEQAE-EVSFVY-RSQF---TSEPAEKLAKKLSDLSPGDL 91 (447)
T ss_pred EEEECCEEEECCCCEEEECCCCHHHHHHCC-CCHHHHHHHHHHHH-HCCCCC-CCCC---CCHHHHHHHHHHHHHCCCCC
T ss_conf 963779999799799998323589898289-97999999999985-388736-6642---45899999999998578887
Q ss_pred CCEEEECCCCHHHHHHHHHH---------CCCCCCCCHHHHCCHHHHHHHHHCCC--------------CCEEECC----
Q ss_conf 85167416602456556663---------16897100454202677526664087--------------6403056----
Q gi|254780486|r 91 EKMLYFGSGYAANMAILSTL---------PQATDLIVYDKLVHASIREGINSGKA--------------QAIAIPH---- 143 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~l---------~~~~d~ii~D~~~HaSi~~g~~ls~a--------------~~~~f~H---- 143 (381)
..+++++||..||.+++..- .++.-+|-....-|.+-.-+..+++- ....+++
T Consensus 92 ~~~~f~~SGsEAvE~AiKlA~~y~~~r~~t~r~~Iis~~~syHG~T~ga~s~sg~~~~~~~~~~~~~~~~~~~~p~~~r~ 171 (447)
T PRK06917 92 NWSFFVNSGSEANETAMKIAIQHWQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSILEDYPTISAPYCYRC 171 (447)
T ss_pred CEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 87996287899999999999999998389998489995055146666036623882114787887889774489865577
Q ss_pred --C---------CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC-CHHH----HHHHHHHHHHCCEEEEECCCCCCCCC
Q ss_conf --8---------814789976431000247860797146215766-1346----89999986313608986131122234
Q gi|254780486|r 144 --N---------NINSFAENINKWRKSGGKGFPWIVVESIYSMDG-DKAP----LDDLVKIANDYDGFIVVDEAHATGVC 207 (381)
Q Consensus 144 --n---------D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G-~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~ 207 (381)
+ ..++|++.+++. .+.....|++|.|....| .+.| |+++++||++||++||+||++ +| +
T Consensus 172 ~~~~~~~~~~~~~~~~le~~i~~~---~~~~iAAvi~EPi~g~~Gg~~~p~~~yl~~lr~lc~~~gillI~DEV~-tG-f 246 (447)
T PRK06917 172 PVQKVYPTCQLACATELERSIERI---GAEHIAAFIAEPIIGAAGGAVVPPKGYYKVIKDICSHYDILFIADEVM-TG-L 246 (447)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHH---CCCCEEEEEECCCEECCCCCEECCHHHHHHHHHHHHHCCCEEEEEECE-EC-C
T ss_conf 777654035899999999999973---887746999713030579716468789999999965269528974110-07-8
Q ss_pred CCCCCEE-EEEHHCCCCCCCCCCCCCCCCCE---EEEEECCCCCCCCCCCCCCCEEC--CCCCCCCHHHHHHHHHHHHHH
Q ss_conf 7776401-10000134652100134656530---26752451001000012110000--135775025789887898862
Q gi|254780486|r 208 GPLGKGL-THIIEERNNVIVMHSCSKALGSS---GALVGSNKIIYDYLINYAKPFIY--TTSPSPILAVVACEALKLIKR 281 (381)
Q Consensus 208 G~~G~G~-~~~~~~~~~~iv~~TlsKa~g~~---GG~i~~~~~ii~~l~~~~~~~if--st~l~P~~~aaa~aal~~l~~ 281 (381)
|++|+.. .+++++.||++ ||+|++|+. -|.+++++++.+.+......+.. |-+.+|..|++++++|+++++
T Consensus 247 GRtG~~fa~e~~gv~PDii---~~gK~l~gG~~Pl~av~~~~~i~~~~~~g~~~~~~g~Tf~gnpla~aaa~a~L~~l~~ 323 (447)
T PRK06917 247 GRTGAWFAMEHWGVEPDIM---TLGKGLGAGYTPMAATVVSDRVMEPILRGSRSVMSGHTLSANPLSAATALAVIEYMEK 323 (447)
T ss_pred CCCCCCCHHHHCCCCCCEE---EECHHHCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 7568743153359897789---7740111898773899881898865405887620177898999999999999999986
Q ss_pred CCCHHHHHHHHHHHHHH-H---HHCC--C-CCCCCCCEEEEEE-----------CCHHHHHHHHHHHHHCCEEEEEECCC
Q ss_conf 71022478999999998-7---6417--9-7899897289995-----------89799999999999779189862288
Q gi|254780486|r 282 KPALHKSLLQLINITDK-I---ANKK--I-GFSSQSHIQSIVI-----------GDNKSCLNIAKNLQKKGFDIRAIRPP 343 (381)
Q Consensus 282 ~~~~~~~l~~~~~~~~~-~---~~~~--~-g~~~~s~I~~v~~-----------gd~~~a~~~~~~L~~~Gi~v~~i~~P 343 (381)
+. +.++.+++.+++.+ + .... + .+.+..-+..|.+ .+...+..+.+.++++|+++.+...-
T Consensus 324 ~~-l~~~~~~~G~~l~~~L~~l~~~~~~i~dVRG~GLm~giel~~d~~~~~~~~~~~~~a~~i~~~~~~~Gll~~~~~~~ 402 (447)
T PRK06917 324 HN-LPEKTAEKGEYLIKGLQEVQQQSTIIGDVRGKGLLIGVEFVADQKTKKPFPQPFSKASELISVAAKNGLLLYPAVSG 402 (447)
T ss_pred CC-HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf 45-99999999999999999998639977876515616999984266556778724899999999999789889874456
Q ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 888887039996287899999999999999998873
Q gi|254780486|r 344 TVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 344 tVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
....+...|||+|+...|++|||+++++|+++++|.
T Consensus 403 ~~g~~~~~lrl~PPL~it~~eid~~i~~l~~al~ev 438 (447)
T PRK06917 403 QAGKEGSALLIAPPMTTTYSELDELLSIFAKSVEEM 438 (447)
T ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 778999989997992278999999999999999999
No 53
>PRK01278 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=2.2e-34 Score=234.42 Aligned_cols=336 Identities=15% Similarity=0.170 Sum_probs=233.1
Q ss_pred HHHHHHCCCEEEECCCCEEEECCCCCC-CCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC
Q ss_conf 999997598399928976898034465-6677-98899999999998637868872244368858999999998401288
Q gi|254780486|r 13 LQKIKSKGRHRQLLRRQDIWDFTSHDY-LALS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF 90 (381)
Q Consensus 13 l~~~~~~g~~~~~~~~~~~l~f~s~dY-LGl~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~ 90 (381)
+.-.+++|.+.++.||++||||.|.-. ..|. +||+|.+++.+++++.+.+ +.++ +.+...+|-++|++....
T Consensus 15 i~i~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~ai~~q~~~l~~~----~~~~--~~~~~~~la~~L~~~~~~ 88 (389)
T PRK01278 15 LRFERGEGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHV----SNLY--RIPEQERLAERLVENSFA 88 (389)
T ss_pred CCEEEEECCEEEECCCCEEEECCCCHHHCEECCCCHHHHHHHHHHHHHCCCC----CCCC--CCHHHHHHHHHHHHCCCC
T ss_conf 7779976599997998999993609886122899789999999998656676----5653--687999999997533676
Q ss_pred CCEEEECCCCHHHHHHHHHH---------CCCCCCCCHHHHCCHHHHHHHHHCCC------------CCEEECCCCHHHH
Q ss_conf 85167416602456556663---------16897100454202677526664087------------6403056881478
Q gi|254780486|r 91 EKMLYFGSGYAANMAILSTL---------PQATDLIVYDKLVHASIREGINSGKA------------QAIAIPHNNINSF 149 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~l---------~~~~d~ii~D~~~HaSi~~g~~ls~a------------~~~~f~HnD~~~L 149 (381)
+..++++||..||.+++..- .++.-+|-.+..-|.+-.-++.+++. .+...+.||++.+
T Consensus 89 d~v~f~~sGsEAve~AlklAr~~~~~~g~t~r~~ii~~~~~yHG~t~~~~s~sg~~~~~~~~~p~~~~~~~~~~~d~~~l 168 (389)
T PRK01278 89 DKVFFTNSGAEAVECAIKTARRYQYGKGHPERYRIITFEGAFHGRTLATIAATGQEKYLEGFGPLVDGFDQVPFGDIEAL 168 (389)
T ss_pred CEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCCCCCHHHCCCCCCCCCCEEECCCCCHHHH
T ss_conf 87999687489999999999998885399997289998888886763511357884433666899888246778978999
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCE-EEEEHHCCCCC
Q ss_conf 99764310002478607971462157661346----89999986313608986131122234777640-11000013465
Q gi|254780486|r 150 AENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKG-LTHIIEERNNV 224 (381)
Q Consensus 150 e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G-~~~~~~~~~~~ 224 (381)
++.+.. ....|++|.|.+..|.+.| +++++++|++||++||+||++ +| +|++|+. ..+++++.||+
T Consensus 169 ~~~~~~-------~iAaviiEPi~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEV~-tG-fGRtG~~fa~e~~gv~PDi 239 (389)
T PRK01278 169 KAAITP-------NTAAILIEPIQGEGGIRPLPDEFLKGLRQLCDENGLLLIFDEVQ-CG-VGRTGKLFAHEWAGVTPDI 239 (389)
T ss_pred HHHHCC-------CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEEEE-CC-CCCCCCCCHHHCCCCCCCE
T ss_conf 986288-------81799996888888960699999999999998606538742100-07-7755664220036768986
Q ss_pred CCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH---
Q ss_conf 21001346565302---675245100100001211000013577502578988789886271022478999999998---
Q gi|254780486|r 225 IVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDK--- 298 (381)
Q Consensus 225 iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~--- 298 (381)
+ ||||++|+ | |.+++++++.+.+.....+ +|-+.+|..|++++++|++++++. +.++.++..+++.+
T Consensus 240 v---~~gK~l~g-G~P~sav~~~~ei~~~~~~g~~~--~T~~gnp~~~aaala~L~~i~~~~-l~~~v~~~G~~l~~~L~ 312 (389)
T PRK01278 240 M---ALAKGIGG-GFPLGACLATEEAAKGMTPGTHG--STYGGNPLAMAVGNAVLDVVLAPG-FLDNVQKMGLYLKQKLE 312 (389)
T ss_pred E---EECCCCCC-CCCEEEEEECHHHHHHCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHH
T ss_conf 7---87012468-87427998638878543688767--799979999999999999998646-99999999999999999
Q ss_pred -HHHCCCC----CCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf -7641797----89989728999589799999999999779189862288888887039996287899999999999999
Q gi|254780486|r 299 -IANKKIG----FSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILP 373 (381)
Q Consensus 299 -~~~~~~g----~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~ 373 (381)
+..+.-. +.+......+.+.++ +.++..+++++|+++.+ .+...|||.|+...|++||+.++++|+
T Consensus 313 ~l~~~~p~~i~~vRG~Gl~~gie~~~~--~~~i~~~~~~~Gll~~~-------~g~~~lr~~PpL~it~~ei~~~~~~l~ 383 (389)
T PRK01278 313 SLVDRFPDVIEEVRGEGLMLGLKCVVP--SRDLVAALRDEGLLTVP-------AGDNVVRLLPPLIITEEEIDEALERLE 383 (389)
T ss_pred HHHHHCCCCEEEEEEEEEEEEEEECCC--HHHHHHHHHHCCCEEEE-------CCCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 998768671355645036999994588--99999999979938972-------799979997881398999999999999
Q ss_pred HHHHHH
Q ss_conf 998873
Q gi|254780486|r 374 QIISEG 379 (381)
Q Consensus 374 ~v~~E~ 379 (381)
++++|+
T Consensus 384 ~al~~v 389 (389)
T PRK01278 384 RAAESL 389 (389)
T ss_pred HHHHHC
T ss_conf 999759
No 54
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=9.3e-34 Score=230.57 Aligned_cols=340 Identities=15% Similarity=0.195 Sum_probs=232.0
Q ss_pred HHHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC---C
Q ss_conf 9975983999289768980344---656677988999999999986378688722443688589999999984012---8
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF---G 89 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~---g 89 (381)
.|++|.|.++.||++||||.|. .-||- +||+|.+|+.+++++ . .++ + .....++...+|.++|+++. |
T Consensus 27 ~rg~G~yl~D~dG~~ylD~~sg~~~~~lGh-~~p~i~~Ai~~Ql~~-l-~~~--~-~~~~~~~~~~~lae~l~~~~p~~g 100 (421)
T PRK06777 27 VRAENATLWDEEGREYIDFAAGIAVLNTGH-RHPKVMAAVRQQLDQ-F-THT--A-YQIVPYASYVTLAERINSLAPISG 100 (421)
T ss_pred EECCCCEEEECCCCEEEEECCCHHHHHHCC-CCHHHHHHHHHHHHH-C-CCC--C-CCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 967249899698799989353387520247-989999999999861-3-574--5-545566699999999997477667
Q ss_pred CCCEEEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHHHHHHHHCCC-------------CC--EEECCC-------
Q ss_conf 88516741660245655666---316897100454202677526664087-------------64--030568-------
Q gi|254780486|r 90 FEKMLYFGSGYAANMAILST---LPQATDLIVYDKLVHASIREGINSGKA-------------QA--IAIPHN------- 144 (381)
Q Consensus 90 ~e~al~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi~~g~~ls~a-------------~~--~~f~Hn------- 144 (381)
.+..++++||..||.+++.. ..++..+|-.+..-|.+-.-.+.+++- .+ ..|+..
T Consensus 101 ~~~v~f~~SGSEAve~AiKlAr~~tgr~~ii~~~~syHG~t~~a~s~tg~~~~~~~~~~p~p~~~~~~~~p~~~~~~~~~ 180 (421)
T PRK06777 101 NSKTAFFTTGAEAVENAVKIARAATGRPGVIAFSGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELYGVSVE 180 (421)
T ss_pred CCEEEEECCHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHEECCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHH
T ss_conf 64499967827899999999998639996377578769963433001588775446778999860223689722465689
Q ss_pred -CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-EEEH
Q ss_conf -8147899764310002478607971462157661346----899999863136089861311222347776401-1000
Q gi|254780486|r 145 -NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL-THII 218 (381)
Q Consensus 145 -D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~-~~~~ 218 (381)
.++.+++.++.. ..++....|++|.|.+..|.+.| |+++++||++||++||+||++ +| +|++|+.. ++++
T Consensus 181 ~~~~~l~~~~~~~--~~~~~iAAvi~EPiqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~-tG-fGRtG~~fa~e~~ 256 (421)
T PRK06777 181 EAISSVERLFRCD--ISPTQVAAILLEPIQGEGGFNIAPPEFVSALRTLCDEHGILLIADEVQ-TG-FARTGKLFAMEYY 256 (421)
T ss_pred HHHHHHHHHHHHC--CCCCCEEEEEEECCCCCCCCEECCHHHHHHHHHHHHHCCCEEEECCCE-EC-CCCCCCCCHHHCC
T ss_conf 9999999999750--588858999983543788864099999999999999839779711211-06-7756784343158
Q ss_pred HCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf 01346521001346565302---675245100100001211000013577502578988789886271022478999999
Q gi|254780486|r 219 EERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINI 295 (381)
Q Consensus 219 ~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~ 295 (381)
++.||++ ||+|++|+ | |.+.+++++++...... +-+|-+.+|..|++++++|+++++++ +.++.+++.++
T Consensus 257 gv~PDiv---~~gKgl~g-G~P~~av~~~~~i~~~~~~~~--~~~Tf~G~pl~caaa~a~L~~i~~~~-l~~~~~~~g~~ 329 (421)
T PRK06777 257 DTKVDLI---TMAKSLGG-GMPISAVTGRADVMDAPLPGG--LGGTYAGNPLAVAAALAVLDVIAEEK-LCERALILGAK 329 (421)
T ss_pred CCCCCEE---EECCCCCC-CCCEEEEEECHHHHCCCCCCC--CCCCCCCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHH
T ss_conf 7779788---74400258-765078986278752578876--37889989899999999999998635-99999999999
Q ss_pred HHH-HHHC--CC----CCCCCCCEEEEEECC-------HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCC
Q ss_conf 998-7641--79----789989728999589-------799999999999779189862288888887039996287899
Q gi|254780486|r 296 TDK-IANK--KI----GFSSQSHIQSIVIGD-------NKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVD 361 (381)
Q Consensus 296 ~~~-~~~~--~~----g~~~~s~I~~v~~gd-------~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t 361 (381)
+.+ +... .. .+.+..-+..|.+.| ++.+..+.++++++|+++.+.. .....|||.|+...|
T Consensus 330 l~~~L~~l~~~~p~v~dVRG~GL~~gie~~d~~~~~~~~~~~~~i~~~~~~~Glll~~~g-----~~~nvir~~PPL~it 404 (421)
T PRK06777 330 LVEVLEKAQMSNAAIVGIRARGSMVAVEFNDPVTGKPSPELTRAYQRQALEEGLLLLSCG-----VHGNVIRFLYPLTIP 404 (421)
T ss_pred HHHHHHHHHHHCCCEEEEECCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECC-----CCCCEEEEECCCCCC
T ss_conf 999999988558988986236489999971687789589999999999997898898458-----999989997995478
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999988
Q gi|254780486|r 362 EPTIVKLFDILPQIIS 377 (381)
Q Consensus 362 ~edi~~~~~~l~~v~~ 377 (381)
++|||+++++|+++++
T Consensus 405 ~~eid~~~~il~~aL~ 420 (421)
T PRK06777 405 DKQFKKAMNILTRLLA 420 (421)
T ss_pred HHHHHHHHHHHHHHHC
T ss_conf 9999999999999974
No 55
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=100.00 E-value=4e-34 Score=232.83 Aligned_cols=340 Identities=14% Similarity=0.147 Sum_probs=231.2
Q ss_pred HHHHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC-CCHHHHHHHHHHHHHCC-
Q ss_conf 99975983999289768980344---65667798899999999998637868872244368-85899999999840128-
Q gi|254780486|r 15 KIKSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCG-NYNQHLELEEEAADFFG- 89 (381)
Q Consensus 15 ~~~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G-~~~~~~~lE~~lA~~~g- 89 (381)
-.+++|.|.++.||++||||.|. .-||- +||+|.+|+.++++ +..... +.+ +++.-.+|-++|+++..
T Consensus 29 I~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh-~~p~v~~Ai~~q~~-~l~~~~-----~~~~~~~~~~~lae~L~~~~p~ 101 (428)
T PRK07986 29 VASAEGCELILADGRRLVDGMSSWWAAIHGY-NHPQLNAAMKSQID-AMSHVM-----FGGITHQPAIELCRKLVAMTPQ 101 (428)
T ss_pred EEEEECCEEEECCCCEEEECCCCHHHHHCCC-CCHHHHHHHHHHHH-HCCCCC-----CCCCCCHHHHHHHHHHHHHCCC
T ss_conf 6963328899799999998662287500479-96999999999997-578703-----6886778999999999984888
Q ss_pred -CCCEEEECCCCHHHHHHHHHH--------CCCCCCCCHHHHCCHHHHHHHHHCC----------C--C---CE------
Q ss_conf -885167416602456556663--------1689710045420267752666408----------7--6---40------
Q gi|254780486|r 90 -FEKMLYFGSGYAANMAILSTL--------PQATDLIVYDKLVHASIREGINSGK----------A--Q---AI------ 139 (381)
Q Consensus 90 -~e~al~~~sG~~An~~~i~~l--------~~~~d~ii~D~~~HaSi~~g~~ls~----------a--~---~~------ 139 (381)
.+.+++.+||..||..++..- .++..+|..+.--|..-.-+.-+++ . . ..
T Consensus 102 ~l~~vff~~sGSEAvE~AlKlAr~y~~~~g~~r~~ii~~~~syHG~T~gals~t~~~~~~~~~~~~~~p~~~~~~~~~~~ 181 (428)
T PRK07986 102 PLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTFRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSR 181 (428)
T ss_pred CCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 75869964862899999999999999970998644999838738997122573168644434557779985013788766
Q ss_pred ---EECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC-CCCHH-H---HHHHHHHHHHCCEEEEECCCCCCCCCCCCC
Q ss_conf ---305688147899764310002478607971462157-66134-6---899999863136089861311222347776
Q gi|254780486|r 140 ---AIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSM-DGDKA-P---LDDLVKIANDYDGFIVVDEAHATGVCGPLG 211 (381)
Q Consensus 140 ---~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm-~G~~a-p---L~~i~~l~~~y~~~LivDEah~~Gv~G~~G 211 (381)
.|..||+.++++.+.+. +.....|++|.+..- .|... | |++++++|++||++||+||++ +| +|++|
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~----~~~iAAviiEPi~qg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~-tG-fGRtG 255 (428)
T PRK07986 182 FDGEWDERDIAPFARLMAAH----RHEIAAVILEPIVQGAGGMRIYHPEWLKRIRKLCDREGILLIADEIA-TG-FGRTG 255 (428)
T ss_pred CCCCCCHHHHHHHHHHHHHC----CCCEEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHCCCEEEECCCC-CC-CCCCC
T ss_conf 56555712399999999747----88701899832446769835389999999999998639636611000-27-88667
Q ss_pred CEE-EEEHHCCCCCCCCCCCCCCCCCE---EEEEECCCCCCCCCCCC-CCCEEC--CCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 401-10000134652100134656530---26752451001000012-110000--135775025789887898862710
Q gi|254780486|r 212 KGL-THIIEERNNVIVMHSCSKALGSS---GALVGSNKIIYDYLINY-AKPFIY--TTSPSPILAVVACEALKLIKRKPA 284 (381)
Q Consensus 212 ~G~-~~~~~~~~~~iv~~TlsKa~g~~---GG~i~~~~~ii~~l~~~-~~~~if--st~l~P~~~aaa~aal~~l~~~~~ 284 (381)
+.. ++++++.|+++ |++|++|+. -|.+++++++.+.+... ...|.+ |-+.+|..|++++++|++++++.
T Consensus 256 ~~fa~e~~gv~PDii---t~gKgl~gG~~Pl~av~~~~~i~~~~~~~~~~~f~hg~Tf~Gnpla~Aaa~a~L~~i~~~~- 331 (428)
T PRK07986 256 KLFACEHAGIAPDIL---CLGKALTGGTMTLSATLTTREVAETISNGEAGCFMHGPTFMGNPLACAVANASLSLLESGD- 331 (428)
T ss_pred CCCCCCCCCCCCCEE---EECCCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC-
T ss_conf 865000047899889---9752013887753899986999963056876541017789999899999999999998656-
Q ss_pred HHHHHHHHHHHHHHHHH--CCCC----CCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCC
Q ss_conf 22478999999998764--1797----89989728999589799999999999779189862288888887039996287
Q gi|254780486|r 285 LHKSLLQLINITDKIAN--KKIG----FSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITL 358 (381)
Q Consensus 285 ~~~~l~~~~~~~~~~~~--~~~g----~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a 358 (381)
+.++.++..+++.+... .... +....-+..+.+.++.....+.+.++++|+++.+. + ..|||+|+.
T Consensus 332 l~~~~~~~g~~l~~~L~~L~~~~~V~dVRg~Gl~~~ve~~~p~~~~~~~~~~~~~Gll~~~~-------g-~~i~l~PPL 403 (428)
T PRK07986 332 WQQQVAAIESQLREELAPLRDAEMVADVRVLGAIGVVETTRPVNMAALQRFFVEQGVWIRPF-------G-KLIYLMPPY 403 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCCCHHHHHHHHHHCCCEEEEC-------C-CEEEEECCC
T ss_conf 99999999999999999875599578774267289998079453999999999799489745-------9-999998991
Q ss_pred CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 899999999999999998873
Q gi|254780486|r 359 NVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 359 ~~t~edi~~~~~~l~~v~~E~ 379 (381)
..|++||+.++++|+++++|-
T Consensus 404 iit~~ei~~~~~~l~~al~e~ 424 (428)
T PRK07986 404 IILPEQLQRLTAAVNRAVQDE 424 (428)
T ss_pred CCCHHHHHHHHHHHHHHHHHH
T ss_conf 499999999999999999755
No 56
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=5.5e-34 Score=231.99 Aligned_cols=341 Identities=19% Similarity=0.249 Sum_probs=230.9
Q ss_pred HHCCCEEEECCCCEEEECCCCCC---CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCC
Q ss_conf 97598399928976898034465---6677988999999999986378688722443688589999999984012--888
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSHDY---LALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF--GFE 91 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~dY---LGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~--g~e 91 (381)
+++|.|.++.+|++||||.|+-. ||- +||+|.+++.++++ +...+ ++..+ .++...+|-++|++++ +.+
T Consensus 29 ~g~G~~l~D~dG~~yiD~~~g~~~~~lGh-~~p~i~~Av~~q~~-~~~~~--~~~~~--~~~~~~~lae~L~~~~p~~~~ 102 (429)
T PRK08117 29 KGEGCYYYGVDGKEYLDFTSGIAVLNVGH-NHPKVVQAIKEQAD-RLVHG--GSGVI--YYESILKLAEELAEITPGGLD 102 (429)
T ss_pred EEECCEEEECCCCEEEECCCCHHHHHHCC-CCHHHHHHHHHHHH-HCCCC--CCCCC--CCHHHHHHHHHHHHHCCCCCC
T ss_conf 85769999699799999650877534258-96999999999986-34776--77754--776999999999984878878
Q ss_pred CEEEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHHHHHHHHC---------------CCCCEEECCC---------
Q ss_conf 516741660245655666---3168971004542026775266640---------------8764030568---------
Q gi|254780486|r 92 KMLYFGSGYAANMAILST---LPQATDLIVYDKLVHASIREGINSG---------------KAQAIAIPHN--------- 144 (381)
Q Consensus 92 ~al~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi~~g~~ls---------------~a~~~~f~Hn--------- 144 (381)
.+++.+||..||.+++.. ..++.-+|-.+..-|.+-.-..-++ .....+|++.
T Consensus 103 ~v~f~~sGsEAve~AiklAr~~tgr~~ii~~~~~yHG~t~~a~s~t~~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~ 182 (429)
T PRK08117 103 MFFFSNSGAEAIEGALKLAKHVTKRQGIISFTGAFHGRTLGALSVTTSSSKYRKRYQPLLPSVYHAPYPYCFRCPIGRDP 182 (429)
T ss_pred EEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCH
T ss_conf 89994874689999999999863898599984577888660455316753234577899998366378863256567880
Q ss_pred ------CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE
Q ss_conf ------8147899764310002478607971462157661346----899999863136089861311222347776401
Q gi|254780486|r 145 ------NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL 214 (381)
Q Consensus 145 ------D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~ 214 (381)
+..++++.+.+.. .++....|++|.|.+..|.+.| +++++++|++||++||+||++ +| +|++|...
T Consensus 183 ~~~~~~~~~~l~~~~~~~~--~~~~iAAviiEPi~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~-tG-fGRtG~~f 258 (429)
T PRK08117 183 ESCSLECLRDLESLFKRQI--APEEVAAIIIEPVLGEGGYIVPPKEFLQKVREICDEHGILLIFDEVQ-SG-FGRTGKWF 258 (429)
T ss_pred HHHHHHHHHHHHHHHHHHC--CCCCEEEEEEECCCCCCCCEECCHHHHHHHHHHHHHCCCEEECCCCC-CC-CCCCCCCC
T ss_conf 5668999999999998624--88878999996466788937388899999999987639179734311-07-77667732
Q ss_pred -EEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf -100001346521001346565302---6752451001000012110000135775025789887898862710224789
Q gi|254780486|r 215 -THIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLL 290 (381)
Q Consensus 215 -~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~ 290 (381)
.+++++.|+++ ||||++|+ | +.+++++++.+.+.....+..| +.+|..|++++++|++++++. +.++.+
T Consensus 259 a~~~~gv~PDiv---~~gK~lgg-G~Plsav~~~~~i~~~~~~~~~~~T~--~gnp~~~aaa~a~L~~~~~~~-l~~~v~ 331 (429)
T PRK08117 259 AAETFGVVPDIM---TVAKGIAS-GFPLSAVVASKELMDQWPLGAHGTTF--GGNPVACAAALATLEVIKEEK-LLENAN 331 (429)
T ss_pred HHHCCCCCCCEE---EEEECCCC-CCCCCCCCCCHHHHHCCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHCC-HHHHHH
T ss_conf 654049899878---87101447-89864221479997066888868589--989899999999999997556-999999
Q ss_pred HHHHHHHH----HHHCC--C-CCCCCCCEEEEEE------CCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECC
Q ss_conf 99999998----76417--9-7899897289995------8979999999999977918986228888888703999628
Q gi|254780486|r 291 QLINITDK----IANKK--I-GFSSQSHIQSIVI------GDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISIT 357 (381)
Q Consensus 291 ~~~~~~~~----~~~~~--~-g~~~~s~I~~v~~------gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~ 357 (381)
+..+++.. +..+. + .+.+..-+..+.+ ++...+.++.+.++++|+++.... .....|||+|+
T Consensus 332 ~~g~~l~~~L~~l~~~~p~v~~VRG~Gl~~giel~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g-----~~~n~i~~~PP 406 (429)
T PRK08117 332 NMGAYALERLEKLKEKYPVIGDVRGIGLMIGIEFVDETGEPDGDAVEKILDKCLENGLLLYGCG-----NDGNVLRFIPP 406 (429)
T ss_pred HHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEEECC-----CCCCEEEEECC
T ss_conf 9999999999999971998788522667999999648889469999999999996995898447-----99998999799
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 7899999999999999998873
Q gi|254780486|r 358 LNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 358 a~~t~edi~~~~~~l~~v~~E~ 379 (381)
..+|++|||+++++|+++++|.
T Consensus 407 L~is~~eid~~~~~l~~al~e~ 428 (429)
T PRK08117 407 LTVTKEEIDQGLSILDKGLGEY 428 (429)
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
T ss_conf 7799999999999999999976
No 57
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=100.00 E-value=6.8e-34 Score=231.43 Aligned_cols=335 Identities=16% Similarity=0.210 Sum_probs=233.5
Q ss_pred CEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCCCEEE
Q ss_conf 83999289768980344---656677988999999999986378688722443688589999999984012--8885167
Q gi|254780486|r 21 RHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF--GFEKMLY 95 (381)
Q Consensus 21 ~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~--g~e~al~ 95 (381)
.|..+.+|++||||.|- .-||- +||+|++|+.+++. +..+. |..+ .++...+|.++|+++. +.+.+++
T Consensus 67 ~~L~D~dG~~YLD~~sG~~~~~lGH-~hp~I~~Ai~~Ql~-~~~~~---s~~~--~~~~~~~lae~L~~~~P~~~~~vff 139 (442)
T TIGR03372 67 NTLIDTQGNEFIDCLGGFGIFNVGH-RNPNVIAAVENQLA-KQPLH---SQEL--LDPLRALLAKTLAALTPGKLKYSFF 139 (442)
T ss_pred CEEEECCCCEEEECCHHHHHHHCCC-CCHHHHHHHHHHHH-HCCCE---ECCC--CCHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 6799798999888456388510067-98999999999972-36830---1444--5689999999999747888787986
Q ss_pred ECCCCHHHHHHHHHH---C---CCCCCCCHHHHCCHHHHHHHHHCCC------------CCEEECCCCHHHHHHHHHHHH
Q ss_conf 416602456556663---1---6897100454202677526664087------------640305688147899764310
Q gi|254780486|r 96 FGSGYAANMAILSTL---P---QATDLIVYDKLVHASIREGINSGKA------------QAIAIPHNNINSFAENINKWR 157 (381)
Q Consensus 96 ~~sG~~An~~~i~~l---~---~~~d~ii~D~~~HaSi~~g~~ls~a------------~~~~f~HnD~~~Le~~l~~~~ 157 (381)
.+||..||.+++..- . ++...|-.+..-|..-.-...+++. .+...+.+|.+.+++.+++.+
T Consensus 140 ~nSGSEAvE~AiKlAr~y~~~~Gk~~ii~~~~syHG~T~ga~s~t~~~~~~~~~~p~~~~~~~~~~~d~~~~~~~~~~~~ 219 (442)
T TIGR03372 140 CNSGTESVEAALKLAKAYQSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECK 219 (442)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHHHHHHH
T ss_conf 38867999999999999732689818999916778747570302478433578878999825557899999999999887
Q ss_pred HCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-EEEHHCCCCCCCCCCCCC
Q ss_conf 002478607971462157661346----899999863136089861311222347776401-100001346521001346
Q gi|254780486|r 158 KSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL-THIIEERNNVIVMHSCSK 232 (381)
Q Consensus 158 ~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~-~~~~~~~~~~iv~~TlsK 232 (381)
+. +.....|++|.|.+..|.+.| |++++++|++||++||+||++ +| +|++|+.. .+++++.||++ ||+|
T Consensus 220 ~~-~~~iAaviiEPiqg~gG~~~p~~~yl~~lr~lc~~~gvllI~DEVq-tG-fGRTG~~fa~e~~gV~PDIv---t~gK 293 (442)
T TIGR03372 220 KT-GDDVAAIILEPIQGEGGVILPPEGYLPAVRALCDEFGALLILDEVQ-TG-MGRTGKMFACEHEGVQPDIL---CLAK 293 (442)
T ss_pred HC-CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCC-CC-CCCCCCCHHHHCCCCCCCHH---HHHH
T ss_conf 55-9978999984677777874499999999999999849703236212-27-98477833765489999768---6545
Q ss_pred CCCCEE---EEEECCCCCCCCCCCCCCCEECC--CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH----HHHHCC
Q ss_conf 565302---67524510010000121100001--357750257898878988627102247899999999----876417
Q gi|254780486|r 233 ALGSSG---ALVGSNKIIYDYLINYAKPFIYT--TSPSPILAVVACEALKLIKRKPALHKSLLQLINITD----KIANKK 303 (381)
Q Consensus 233 a~g~~G---G~i~~~~~ii~~l~~~~~~~ifs--t~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~----~~~~~~ 303 (381)
++|+.+ |.+.+++++.+.+-. .++.++ -+.+|..|++++++|+++++++ +.++..+..+++. ++..+.
T Consensus 294 gLggG~~Pi~av~~~~~i~~~~~~--~~~~h~sTf~Gnpla~aaalavL~~i~~~~-l~~~~~~~G~~l~~~L~~L~~~~ 370 (442)
T TIGR03372 294 ALGGGVMPIGATIATEAVFSVLFD--NPFLHTTTFGGNPLACAAALATINELLEKN-LPAQAAIKGDFLLDGFQQLAAEY 370 (442)
T ss_pred HHCCCCCCEEEEEECHHHHHHHHC--CCCCCCCCCCCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 415887762689750999877624--897547888989999999999999998656-99999999999999999998768
Q ss_pred ---C-CCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf ---9-789989728999589799999999999779189862288888887039996287899999999999999998
Q gi|254780486|r 304 ---I-GFSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 304 ---~-g~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
+ .+.+..-++.|.+.++.....+.+.++++|+++.... .+...|||.|+...|+|||+.++++|++++
T Consensus 371 p~~V~dVRG~GLm~giE~~~~~~~~~~~~~~~~~gvl~~~~~-----~~~~~iri~PPL~it~eeid~~i~~l~~aL 442 (442)
T TIGR03372 371 PDLIIEARGKGLLMAIEFRDNEIGYAFAKELFQQNILVAGTL-----NNAKSIRIEPPLTITIEQCALVIKAAKDAL 442 (442)
T ss_pred CCCEEEEEECCEEEEEEECCCHHHHHHHHHHHHCCCEEEECC-----CCCCEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 781668564538999997881679999999997897998558-----998989998895089999999999999869
No 58
>PRK07678 aminotransferase; Validated
Probab=100.00 E-value=1.6e-33 Score=229.05 Aligned_cols=347 Identities=16% Similarity=0.205 Sum_probs=228.3
Q ss_pred HHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC-
Q ss_conf 975983999289768980344---6566779889999999999863786887224436885899999999840128885-
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEK- 92 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~- 92 (381)
+++|.|.++.+|++||||.|. .-||- +||+|.+|+.++++ +....+ . ...++...+|-++|+++++...
T Consensus 35 ra~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~Ai~~q~~-~l~~~~---~--~~~~~~~~~lae~L~~~~p~~~~ 107 (451)
T PRK07678 35 KAEGCWVTDIQGKRYLDGMSGLWCVNVGY-GRKELAEAAYEQLQ-TLSYFP---L--SQSHEPAIKLAEKLNEWLGGEYV 107 (451)
T ss_pred EEEECEEEECCCCEEEECCCCHHHHHHCC-CCHHHHHHHHHHHH-HCCCCC---C--CCCCHHHHHHHHHHHHHCCCCCE
T ss_conf 60448899798899999870898634269-96999999999997-588867---7--53468999999999975797618
Q ss_pred EEEECCCCHHHHHHHHHH---------CCCCCCCCHHHHCCHHHHHHHHHCCCCC--------------E----EECC--
Q ss_conf 167416602456556663---------1689710045420267752666408764--------------0----3056--
Q gi|254780486|r 93 MLYFGSGYAANMAILSTL---------PQATDLIVYDKLVHASIREGINSGKAQA--------------I----AIPH-- 143 (381)
Q Consensus 93 al~~~sG~~An~~~i~~l---------~~~~d~ii~D~~~HaSi~~g~~ls~a~~--------------~----~f~H-- 143 (381)
+++++||..||.+++..- .++...|-.+..-|....-+..+++-.. + .|+.
T Consensus 108 vff~~SGsEAvE~AiKlAr~y~~~~g~~~r~~ii~~~~~yHG~T~ga~s~tg~~~~~~~~~p~~~~~~~~~~p~~~r~~~ 187 (451)
T PRK07678 108 IFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRGYHGNTMGALAATGQAQRKYKYEPLAPGFLHVAPPDCYRMPG 187 (451)
T ss_pred EEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCHHHHHHCCCHHCCCCCCCCCCCEEECCCCCCCCCCC
T ss_conf 99539738999999999999998609997424346267403897234511574310578888888815738984235776
Q ss_pred ---CCH------HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCC
Q ss_conf ---881------47899764310002478607971462157661346----89999986313608986131122234777
Q gi|254780486|r 144 ---NNI------NSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPL 210 (381)
Q Consensus 144 ---nD~------~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~ 210 (381)
+|. +++++.+ ....+.....|++|.|.+..|.+.| |+++++||++||++||+||++ +| +|++
T Consensus 188 ~~~~~~~~~~~~~~le~~i---~~~~~~~iAaii~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~-tG-fGRt 262 (451)
T PRK07678 188 IESEDIYDLECVKEIDRVM---TWELSETIAAFIMEPIITGGGILMPPQDYMKAVHEICQKHGALLISDEVI-CG-FGRT 262 (451)
T ss_pred CCCCCHHHHHHHHHHHHHH---HHCCCCCEEEEEEEECCCCCCCCCCCHHHHHHHHHHEEECCCEEEECCCC-CC-CCCC
T ss_conf 6652266799999999998---75078867999997537778823188798677877412459557732240-27-8745
Q ss_pred CCEE-EEEHHCCCCCCCCCCCCCCCCCE---EEEEECCCCCCCCCCCCCC--CE--ECCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 6401-10000134652100134656530---2675245100100001211--00--001357750257898878988627
Q gi|254780486|r 211 GKGL-THIIEERNNVIVMHSCSKALGSS---GALVGSNKIIYDYLINYAK--PF--IYTTSPSPILAVVACEALKLIKRK 282 (381)
Q Consensus 211 G~G~-~~~~~~~~~~iv~~TlsKa~g~~---GG~i~~~~~ii~~l~~~~~--~~--ifst~l~P~~~aaa~aal~~l~~~ 282 (381)
|+.. ++++++.||++ ||||++|+. -|.+++++++.+.+..... .+ ..|-+.+|..|++++++|++++++
T Consensus 263 G~~fa~e~~gv~PDiv---~~gK~l~gG~~Plsav~~~~ei~~~~~~~~~~~~~~h~~T~~gnpla~aaa~a~L~~l~~~ 339 (451)
T PRK07678 263 GKAFGFMNYGVKPDII---TMAKGITSAYLPLSATAVKKEIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIMENE 339 (451)
T ss_pred CCCCCHHHCCCCCCEE---EECCCCCCCCCCCEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 6650011059527720---0133445777761677762989976357887666434788987989999999999998415
Q ss_pred CCHHHHHHHHHHHH-HHHHH--CCCC----CCCCCCEEEEEE---------CCHHHHHHHHHHHHHCCEEEEEECCCCCC
Q ss_conf 10224789999999-98764--1797----899897289995---------89799999999999779189862288888
Q gi|254780486|r 283 PALHKSLLQLINIT-DKIAN--KKIG----FSSQSHIQSIVI---------GDNKSCLNIAKNLQKKGFDIRAIRPPTVP 346 (381)
Q Consensus 283 ~~~~~~l~~~~~~~-~~~~~--~~~g----~~~~s~I~~v~~---------gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp 346 (381)
. +.++.++..+++ .++.. ...+ +.+..-...|.+ .+...+..+..+++++|+++.+.... ++
T Consensus 340 ~-l~~~~~~~g~~l~~~L~~~~~~~p~i~dVRG~GLm~gielv~d~~~~~p~~~~~~~~i~~~~~~~Glli~~~g~~-~~ 417 (451)
T PRK07678 340 N-LIERSAQLGSLLLEQLKEELGEHPLVGDIRGKGLLVGIELVNDKETKEPADNDKVASVVNACKEKGLIIGKNGMT-VA 417 (451)
T ss_pred C-HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCC-CC
T ss_conf 0-999999999999999999974599888876165689999853665578799999999999999779888147873-25
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 8870399962878999999999999999988738
Q gi|254780486|r 347 INTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 347 ~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
.....|||.|+...|++|||.++++|+++++|..
T Consensus 418 ~~~n~lr~~PPL~it~~eid~~~~~l~~al~~v~ 451 (451)
T PRK07678 418 GYNNVLTLAPPLCISSEELAFVVGTLKTAMERIK 451 (451)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 7899899978824889999999999999999639
No 59
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=100.00 E-value=5.1e-35 Score=238.44 Aligned_cols=334 Identities=18% Similarity=0.268 Sum_probs=236.4
Q ss_pred HHHHHHHHHHHHHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 78999999999975983999289768980344---656677988999999999986378688722443688589999999
Q gi|254780486|r 6 MSFYEERLQKIKSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEE 82 (381)
Q Consensus 6 ~~~~~~~l~~~~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~ 82 (381)
|.+|+..+.-.+++|.|.++.||++||||.|. .-||- +||++++++.++++ +.... ++ .+ .++...++-+
T Consensus 1 ~~~y~~~i~ivrg~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~ai~~ql~-~~~~~--~~-~~--~~~~~~~l~~ 73 (364)
T PRK04013 1 MSLYRKRLRLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGH-NHPEWVEEMSEQLE-KLVVA--GP-MF--EHEEKEEMLE 73 (364)
T ss_pred CCCCCCCCCEEEEECCEEEECCCCEEEECCHHHHHHHHCC-CCHHHHHHHHHHHH-HCCCC--CC-CC--CCHHHHHHHH
T ss_conf 9988888768984789999699799999575277656548-98899999999997-55765--77-63--6589999999
Q ss_pred HHHHHCCCCCEEEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHHHHHHHHCCC------------CCEEECCCCHH
Q ss_conf 984012888516741660245655666---316897100454202677526664087------------64030568814
Q gi|254780486|r 83 EAADFFGFEKMLYFGSGYAANMAILST---LPQATDLIVYDKLVHASIREGINSGKA------------QAIAIPHNNIN 147 (381)
Q Consensus 83 ~lA~~~g~e~al~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi~~g~~ls~a------------~~~~f~HnD~~ 147 (381)
+|+++.+.+.+++.+||..||.+++.. ..++..+|-.+.--|.+-.-...+++. ....++.||++
T Consensus 74 ~l~~~~~~~~v~f~~SGseAve~AiklAr~~tgr~~ii~~~~~yHG~t~g~ls~~~~~~~~~~~~~~~~~~~~~p~~d~~ 153 (364)
T PRK04013 74 ELSKWVNYEYVYMGNSGTEAVEAALKFARLYTGRKEIIAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVE 153 (364)
T ss_pred HHHHCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHH
T ss_conf 97525797889963884699999999987627999899964886778666334457733345778998870555764399
Q ss_pred HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-EEEHHCCC
Q ss_conf 7899764310002478607971462157661346----899999863136089861311222347776401-10000134
Q gi|254780486|r 148 SFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL-THIIEERN 222 (381)
Q Consensus 148 ~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~-~~~~~~~~ 222 (381)
++++.+.+ ....|++|.|.+..|.+.| +++++++|++||++||+||++ +| + ++|+.. .+++++.|
T Consensus 154 ~~~~~~~~-------~iAavi~EPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~-tG-f-RtG~~~a~e~~gv~P 223 (364)
T PRK04013 154 AAKEAITK-------ETAAVIFEPIQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQ-SG-L-RTGKFLAIEHYKVEP 223 (364)
T ss_pred HHHHHHCC-------CCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCC-CC-C-CCCCCCHHHCCCCCC
T ss_conf 99987266-------73599997677788862487799999999999769976710230-36-0-434302311589999
Q ss_pred CCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
Q ss_conf 6521001346565302---6752451001000012110000135775025789887898862710224789999999987
Q gi|254780486|r 223 NVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKI 299 (381)
Q Consensus 223 ~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~ 299 (381)
|++ ||+|++|+ | |.+.++.++... .++. |-+.+|..|++++++|++++++. +.++..+ .+.++
T Consensus 224 Div---~~gKglgg-G~Pl~av~~~~~i~~~--~h~~----T~~Gnp~~~aaa~a~L~ii~~e~-l~~~~~~---~~~~~ 289 (364)
T PRK04013 224 DIV---TMGKGIGN-GVPVSLTLTNFDVERG--KHGS----TFGGNPLACKAVAVTLRILRRER-LVEKAGE---KFIEI 289 (364)
T ss_pred CEE---EECCCCCC-CCCCEEEEECCCCCCC--CCCC----CCCCCHHHHHHHHHHHHHHHHCH-HHHHHHH---HHHHH
T ss_conf 899---96340008-8651899964101137--6567----55889899999999999998663-9999999---99985
Q ss_pred HHCCC-CCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 64179-78998972899958979999999999977918986228888888703999628789999999999999999887
Q gi|254780486|r 300 ANKKI-GFSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 300 ~~~~~-g~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
....+ ...+..-...|.+.++ +.++.++|+++|+++.+. +...|||.|+...|++|||+++++|+++++|
T Consensus 290 ~~~~v~~vRG~GL~~gie~~~p--~~~~~~~~~~~G~l~~~~-------g~~virl~PPL~it~~eid~~~~~l~~al~e 360 (364)
T PRK04013 290 KGERVVTTRGRGLMIGIVLKKP--VGKYVEELQNRGYLVHTA-------GQRVIRLLPPLIISKDTMEEAKSAIEGVIND 360 (364)
T ss_pred CCCCEEEEECCCEEEEEEECCC--HHHHHHHHHHCCEEEEEC-------CCCEEEEECCEECCHHHHHHHHHHHHHHHHH
T ss_conf 6570089861537999997784--899999999599699637-------9998999888137899999999999999999
Q ss_pred H
Q ss_conf 3
Q gi|254780486|r 379 G 379 (381)
Q Consensus 379 ~ 379 (381)
.
T Consensus 361 v 361 (364)
T PRK04013 361 I 361 (364)
T ss_pred H
T ss_conf 8
No 60
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2e-33 Score=228.45 Aligned_cols=342 Identities=15% Similarity=0.175 Sum_probs=228.9
Q ss_pred HHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC---C
Q ss_conf 975983999289768980344---6566779889999999999863786887224436885899999999840128---8
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG---F 90 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g---~ 90 (381)
|++|.|.++.||++||||.|. .-||- +||+|.+|+.++++ +... ++... + +++...+|-++|++.+. .
T Consensus 26 raeG~~l~D~dG~~ylD~~sg~~~~~lGh-~~p~i~~Ai~~ql~-~l~~-~~~~~-~--~~~~~~~lae~L~~~~p~~~~ 99 (422)
T PRK07495 26 RAENAEIWDKEGRRYIDFAAGIAVVNTGH-RHPKVIAAVKAQLD-RFTH-TCHQV-V--PYENYVRLAERLNALVPGDFE 99 (422)
T ss_pred ECCCCEEEECCCCEEEEECCCHHHHHHCC-CCHHHHHHHHHHHH-HCCC-CCCCC-C--CCHHHHHHHHHHHHHCCCCCC
T ss_conf 55039899898899999260889763457-97999999999985-4667-55665-4--657999999999975687745
Q ss_pred CCEEEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHHHHHHHHCCC---------------CCEEECCC----C---
Q ss_conf 8516741660245655666---316897100454202677526664087---------------64030568----8---
Q gi|254780486|r 91 EKMLYFGSGYAANMAILST---LPQATDLIVYDKLVHASIREGINSGKA---------------QAIAIPHN----N--- 145 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi~~g~~ls~a---------------~~~~f~Hn----D--- 145 (381)
+.+++++||..||.+++.. ..++..+|-.+.--|.+-.-+..+++- ...+|++. +
T Consensus 100 ~~~~F~~SGsEAvE~AiKlAr~~tgr~~iis~~~~yHG~T~~a~s~tg~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~ 179 (422)
T PRK07495 100 KKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMALTGKVVPYKVGFGAMPPDVFHVPFPVELHGVSVDQ 179 (422)
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHH
T ss_conf 47997278625999999975652799879998788778642124313887654356788999936707883235776677
Q ss_pred -HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-EEEHH
Q ss_conf -147899764310002478607971462157661346----899999863136089861311222347776401-10000
Q gi|254780486|r 146 -INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL-THIIE 219 (381)
Q Consensus 146 -~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~-~~~~~ 219 (381)
++.+++.++.. ..+.....|++|.|.+..|.+.| +++++++|++||++||+||++ +| +|++|... +++++
T Consensus 180 ~~~~l~~~~~~~--~~~~~iAAvIvEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~-TG-fGRtG~~fa~e~~g 255 (422)
T PRK07495 180 SLAALDKLFKAD--VDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQ-TG-FARTGKLFAMEHHE 255 (422)
T ss_pred HHHHHHHHHHHC--CCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHCCCEEECCCCC-CC-CCCCCCCHHHHCCC
T ss_conf 999999998751--687757899966764788866388899999999998739668776301-08-87665502654489
Q ss_pred CCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 1346521001346565302---6752451001000012110000135775025789887898862710224789999999
Q gi|254780486|r 220 ERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINIT 296 (381)
Q Consensus 220 ~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~ 296 (381)
+.||++ ||+|++|+ | |.+++++++++......-+ +|-+.+|..|++++++|+++++++ +.++.++..+++
T Consensus 256 v~PDiv---~~gKgl~g-G~Pl~av~~~~~i~~~~~~~~~~--~Tf~Gnpla~aaa~a~L~i~~~~~-l~~~~~~~g~~l 328 (422)
T PRK07495 256 VAADLT---TMAKSLAG-GFPLAAVTGRAEIMDAPGPGGLG--GTYGGNPLGIAAAHAVLDVIEEED-LCERANQLGNRL 328 (422)
T ss_pred CCCCEE---EECHHHHC-CCCCEEEEECHHHHHCCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHH
T ss_conf 998099---96415428-87516888739988355888866--679989899999999999998648-999999999999
Q ss_pred H-HHHH--CCCC----CCCCCCEEEEEEC-------CHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCH
Q ss_conf 9-8764--1797----8998972899958-------97999999999997791898622888888870399962878999
Q gi|254780486|r 297 D-KIAN--KKIG----FSSQSHIQSIVIG-------DNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDE 362 (381)
Q Consensus 297 ~-~~~~--~~~g----~~~~s~I~~v~~g-------d~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~ 362 (381)
. ++.. ...+ +.+..-+..|.+. +...+..+..+++++|+++.+.. .....|||.|+...|+
T Consensus 329 ~~~L~~l~~~~p~v~dvRG~GLm~giel~~~~~~~p~~~~~~~v~~~~~~~Gll~~~~g-----~~~nvi~~~PPL~it~ 403 (422)
T PRK07495 329 KQRLASIRETVPEIADIRGPGFMNAVEFNDADTGLPSAEFANRVRLEALEKGLILLTCG-----VHGNVIRFLAPITIQD 403 (422)
T ss_pred HHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCCCCHHHHHHHHHHHHHCCCEEEECC-----CCCCEEEEECCCCCCH
T ss_conf 99999998549988988624569999983388889788999999999997798898348-----8999899979902579
Q ss_pred HHHHHHHHHHHHHHHHHC
Q ss_conf 999999999999988738
Q gi|254780486|r 363 PTIVKLFDILPQIISEGN 380 (381)
Q Consensus 363 edi~~~~~~l~~v~~E~~ 380 (381)
+||++++++|+++++|.-
T Consensus 404 ~eid~~~~~l~~aL~E~~ 421 (422)
T PRK07495 404 EVFGEALDILEASILEAR 421 (422)
T ss_pred HHHHHHHHHHHHHHHHHC
T ss_conf 999999999999999960
No 61
>PRK07894 consensus
Probab=100.00 E-value=6.2e-34 Score=231.68 Aligned_cols=340 Identities=13% Similarity=0.124 Sum_probs=231.4
Q ss_pred HHCCCEE---EECCCCEEEECCC---CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--
Q ss_conf 9759839---9928976898034---4656677988999999999986378688722443688589999999984012--
Q gi|254780486|r 17 KSKGRHR---QLLRRQDIWDFTS---HDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF-- 88 (381)
Q Consensus 17 ~~~g~~~---~~~~~~~~l~f~s---~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~-- 88 (381)
+++|.|. ...+|++||||.| |+-||-+ ||+|.+|+.++++ +....+ .+. =+++.-.+|-++|++..
T Consensus 36 ~a~G~~l~~v~D~dG~~ylD~~sg~~~~~lGh~-hp~i~~Ai~~Q~~-~l~~~~-~~~---~~~~~~~~lae~L~~~~p~ 109 (430)
T PRK07894 36 AASGAWLTLIRDGGPIEVLDAMSSWWTAIHGHG-HPVLDAALTRQLA-TMNHVM-FGG---LTHEPAARLAQLLVDITPA 109 (430)
T ss_pred EEEECEECCEECCCCCEEEECCHHHHHHHCCCC-CHHHHHHHHHHHH-HCCCCC-CCC---CCCHHHHHHHHHHHHHCCC
T ss_conf 866176732088999998873067985403769-8999999999997-577845-687---5768999999999984888
Q ss_pred CCCCEEEECCCCHHHHHHHHHH---------CCCCCCCCHHHHCCHHHHHHHHHCCCC------------------CEE-
Q ss_conf 8885167416602456556663---------168971004542026775266640876------------------403-
Q gi|254780486|r 89 GFEKMLYFGSGYAANMAILSTL---------PQATDLIVYDKLVHASIREGINSGKAQ------------------AIA- 140 (381)
Q Consensus 89 g~e~al~~~sG~~An~~~i~~l---------~~~~d~ii~D~~~HaSi~~g~~ls~a~------------------~~~- 140 (381)
+.+.+++.+||..||.+++..- .++.-+|-.+..-|.+-.-++.+++.+ ..+
T Consensus 110 ~l~~vff~~sGSeAvE~AiKlAr~y~~~~g~~~r~~ii~~~~sYHG~T~ga~s~t~~~~~~~~~~~~~~~~~~~~~~~p~ 189 (430)
T PRK07894 110 GLDTVFFSDSGSVSVEVAVKMALQYWRSRGRPGKHRLMTWRGGYHGDTFTPMSVCDPDGGMHSLWTDVLARQVFAPQVPR 189 (430)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 87979972781889999999999999971887750799971740477711477533877766666788877666899974
Q ss_pred -ECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC-CCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE
Q ss_conf -056881478997643100024786079714621576-61346----899999863136089861311222347776401
Q gi|254780486|r 141 -IPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMD-GDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL 214 (381)
Q Consensus 141 -f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~-G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~ 214 (381)
|.-...++|++.+.+. +.....|++|.+..-. |.+.| |+++++||++||++||+||++ +| +|++|...
T Consensus 190 ~~~~~~~~~l~~~l~~~----~~~iAaii~EP~iqg~GG~~~p~~~yl~~lr~lc~~~gillI~DEV~-tG-fGRTG~~f 263 (430)
T PRK07894 190 DYDPAYSAAFEAQLAQH----ADELAAVIVEPVVQGAGGMRFHDPRYLRDLRDICDRHDVLLIFDEIA-TG-FGRTGALF 263 (430)
T ss_pred CCCHHHHHHHHHHHHHC----CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEECCCC-CC-CCCCCCCC
T ss_conf 32678899999999846----99866999978743889810289999999999875127626502131-17-87356763
Q ss_pred -EEEHHCCCCCCCCCCCCCCCCCE---EEEEECCCCCCCCCCCC-CCCEE--CCCCCCCCHHHHHHHHHHHHHHCCCHHH
Q ss_conf -10000134652100134656530---26752451001000012-11000--0135775025789887898862710224
Q gi|254780486|r 215 -THIIEERNNVIVMHSCSKALGSS---GALVGSNKIIYDYLINY-AKPFI--YTTSPSPILAVVACEALKLIKRKPALHK 287 (381)
Q Consensus 215 -~~~~~~~~~~iv~~TlsKa~g~~---GG~i~~~~~ii~~l~~~-~~~~i--fst~l~P~~~aaa~aal~~l~~~~~~~~ 287 (381)
++++++.|+++ |++|++++. -|.++.++++.+.+... ...+. +|-+.+|..|++++++|++++++. +.+
T Consensus 264 a~e~~gv~PDii---~~aKgl~gGy~Pl~avl~~~~i~~~~~~~~~~~~~Hg~Ty~GnplacAaala~L~~i~~e~-l~~ 339 (430)
T PRK07894 264 AADHAGVSPDIM---CVGKALTGGYLTLAATLCTADVAHTISAGEAGALMHGPTFMANPLACAVSVASVELLLGQD-WRT 339 (430)
T ss_pred HHHCCCCCCEEE---EECCHHHCCCCCCEEEEEHHHHHHHCCCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHCC-HHH
T ss_conf 543189886399---9773544899762012242989974567888861237898889899999999999998567-999
Q ss_pred HHHHHHHHHHH-HHHC-CC----CCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCC
Q ss_conf 78999999998-7641-79----789989728999589799999999999779189862288888887039996287899
Q gi|254780486|r 288 SLLQLINITDK-IANK-KI----GFSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVD 361 (381)
Q Consensus 288 ~l~~~~~~~~~-~~~~-~~----g~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t 361 (381)
+.++..+++.+ +... .. .+....-+..|.+.++.......+.++++|+++.+. ...||+.|+...|
T Consensus 340 ~~~~~g~~l~~~L~~l~~~p~V~dVRg~Gl~~~vel~~~~~~~~~~~~a~~~Gvl~r~~--------~n~i~l~PPL~it 411 (430)
T PRK07894 340 RVAEIEAGLTAGLAPARALPGVTDVRVLGAIGVIELDRPVDLAVATPAALDHGVWLRPF--------RNLVYAMPPYICT 411 (430)
T ss_pred HHHHHHHHHHHHHHHHCCCCCEEEECCCCEEEEEEECCCCCHHHHHHHHHHCCCEEEEC--------CCEEEEECCCCCC
T ss_conf 99999999999999745799769894668099999678456899999999799389854--------9999997994689
Q ss_pred HHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999999988738
Q gi|254780486|r 362 EPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 362 ~edi~~~~~~l~~v~~E~~ 380 (381)
++|||+++++|.++++++.
T Consensus 412 ~~eid~~~~~l~eal~~lg 430 (430)
T PRK07894 412 PAEIAQITSAMVEVARALG 430 (430)
T ss_pred HHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999999999609
No 62
>PRK08466 consensus
Probab=100.00 E-value=4.4e-33 Score=226.35 Aligned_cols=341 Identities=16% Similarity=0.239 Sum_probs=226.9
Q ss_pred HHHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CC
Q ss_conf 9975983999289768980344---656677988999999999986378688722443688589999999984012--88
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF--GF 90 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~--g~ 90 (381)
-|++|.|.++.||++||||.|. .-||- +||+|.+|+.++++ +....+ .+.. .++...+|-++|++++ +.
T Consensus 33 ~rg~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~Q~~-~l~~~~-~~~~---~~~~~~~lae~L~~~~p~~l 106 (430)
T PRK08466 33 KKAKGVYLYDFDGNAYIDCISSWWVNLFGH-CNPYINEAIKKQID-ELEHVI-LAGF---THEPIIKLSERLCELTPRGL 106 (430)
T ss_pred EECCCCEEEECCCCEEEECCCCHHHHHHCC-CCHHHHHHHHHHHH-HCCCCC-CCCC---CCHHHHHHHHHHHHHCCCCC
T ss_conf 957348899899899999243779761147-97999999999996-577734-5775---87799999999998578877
Q ss_pred CCEEEECCCCHHHHHHHHHH------C-CCCCCCC-HHHHCCHHHHHHHHHCCC--------------CCEEECCC----
Q ss_conf 85167416602456556663------1-6897100-454202677526664087--------------64030568----
Q gi|254780486|r 91 EKMLYFGSGYAANMAILSTL------P-QATDLIV-YDKLVHASIREGINSGKA--------------QAIAIPHN---- 144 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~l------~-~~~d~ii-~D~~~HaSi~~g~~ls~a--------------~~~~f~Hn---- 144 (381)
+.+++++||..||.+++..- . ++...|+ .+..-|.+-.-+..+++. -..+++++
T Consensus 107 ~~v~f~~sGseA~E~AiKlAr~y~~~~g~~k~~iis~~~~yHG~T~ga~s~~~~~~~~~~~~p~~~~~~~~p~p~~~~~~ 186 (430)
T PRK08466 107 NKCFYADNGSSAIEVALKMSFHYHKNKGKKKSLFLSLSNSYHGETLGALSVGDVALYKDTYKPLLLECLQTPVPKDDEAY 186 (430)
T ss_pred CEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHH
T ss_conf 87998377199999999999999752268975899964752688521102578400246778877686115899971667
Q ss_pred --CHHHHHHHHHHHHHCCCCCCCEEEECCCC-CCCCCHH-H---HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-EE
Q ss_conf --81478997643100024786079714621-5766134-6---899999863136089861311222347776401-10
Q gi|254780486|r 145 --NINSFAENINKWRKSGGKGFPWIVVESIY-SMDGDKA-P---LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL-TH 216 (381)
Q Consensus 145 --D~~~Le~~l~~~~~~~~~~~~~vv~egv~-Sm~G~~a-p---L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~-~~ 216 (381)
+++.+++.+++. +.....|++|.+- +-.|... | ++++++||++||++||+||++ +| +|++|... .+
T Consensus 187 ~~~~~~l~~~l~~~----~~~iAAvI~EPiiqg~gg~~~~~~~yl~~lr~lc~~~gillI~DEV~-tG-fGRtG~~fa~~ 260 (430)
T PRK08466 187 QEALEALKRILEKH----AEEICAFILEPLVQCAGNMHMYSAEYLKEAIKLCHKYNIHIIFDEIA-VG-FGRTGTMFALE 260 (430)
T ss_pred HHHHHHHHHHHHHC----CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEE-CC-CCCCCCCHHHH
T ss_conf 88899999999858----99777999978766779976898899999999985359668873101-17-87667620554
Q ss_pred EHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCC---CCCCCEEC--CCCCCCCHHHHHHHHHHHHHHCCCHHHH
Q ss_conf 0001346521001346565302---67524510010000---12110000--1357750257898878988627102247
Q gi|254780486|r 217 IIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLI---NYAKPFIY--TTSPSPILAVVACEALKLIKRKPALHKS 288 (381)
Q Consensus 217 ~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~---~~~~~~if--st~l~P~~~aaa~aal~~l~~~~~~~~~ 288 (381)
++++.|+++ ||+|++|+.. |.+++++++.+.+. +...++.+ |-+.+|..|++++++|++++++. +.++
T Consensus 261 ~~gv~PDiv---~~gK~l~gG~~Pisav~~~~ei~~~~~~~~~~~~~~~h~~T~~Gnpla~aaala~L~~l~~~~-l~~~ 336 (430)
T PRK08466 261 QCGISPDFL---CLSKGITGGYLPLSVVLTSDEIYNAFYAPYEENKAFLHSHSYTGNALACAAANATLDIFEDEN-VIEK 336 (430)
T ss_pred HCCCCCCEE---EECCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHCC-HHHH
T ss_conf 169999889---868410178877499998589998750565556660126578889799999999999999688-8899
Q ss_pred HHHHHHHHHHHHHC--CCC----CCCCCCEEEEEEC----CHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCC
Q ss_conf 89999999987641--797----8998972899958----9799999999999779189862288888887039996287
Q gi|254780486|r 289 LLQLINITDKIANK--KIG----FSSQSHIQSIVIG----DNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITL 358 (381)
Q Consensus 289 l~~~~~~~~~~~~~--~~g----~~~~s~I~~v~~g----d~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a 358 (381)
.++..+++.+.... ... +.....+..+.+- ....+..+.+.++++|+++.+. + ..|||+|+.
T Consensus 337 ~~~~g~~l~~~L~~l~~~~~v~~vRg~Gl~~~iel~~~~~~~~~~~~i~~~~l~~Gll~~~~-------g-~~l~~~PpL 408 (430)
T PRK08466 337 NQILSEFIQKELSRLEKLDFVGNLRQCGMVFAFELLGTDTKERVGLFVFQKALKKGLLLRPL-------G-NTIYFMPPY 408 (430)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCHHHHHHHHHHHHHCCEEEECC-------C-CEEEEECCC
T ss_conf 99999999999998624997578841253899998458850379999999999789389114-------9-999997985
Q ss_pred CCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 8999999999999999988738
Q gi|254780486|r 359 NVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 359 ~~t~edi~~~~~~l~~v~~E~~ 380 (381)
.+|++|||.++++|+++++|+.
T Consensus 409 ~it~eeid~~~~~l~~al~elk 430 (430)
T PRK08466 409 IITKEEIKKVIEVLEEIIKELK 430 (430)
T ss_pred CCCHHHHHHHHHHHHHHHHHHC
T ss_conf 8899999999999999999739
No 63
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.3e-33 Score=229.71 Aligned_cols=342 Identities=20% Similarity=0.227 Sum_probs=227.6
Q ss_pred HHHHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC-
Q ss_conf 99975983999289768980344---65667798899999999998637868872244368858999999998401288-
Q gi|254780486|r 15 KIKSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF- 90 (381)
Q Consensus 15 ~~~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~- 90 (381)
-.+++|.|.++.+|++||||.|. .=||- +||+|.+|+.+++++ .... +. ...++....+|.++|+++...
T Consensus 27 i~raeG~~l~D~dG~~yLD~~sg~~~~~lGH-~~p~v~~Ai~~q~~~-l~~~---~~-~~~~~~~~~~lae~L~~~~p~~ 100 (443)
T PRK08360 27 PVRAENAKVWDIEGKEYIDFLSDAAVQNVGH-NNPRVVKAIKEQADK-LIHA---SY-IYAFPVEPLLLAEKLAEIAPID 100 (443)
T ss_pred EEEEECCEEEECCCCEEEECCCCHHHHHHCC-CCHHHHHHHHHHHHH-CCCC---CC-CCCCCHHHHHHHHHHHHHCCCC
T ss_conf 7961449899697699888122578642437-969999999999863-6873---57-7557648999999999857998
Q ss_pred -CCEEEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHHHHHHHHCC--------------CCCEEECC------C--
Q ss_conf -8516741660245655666---31689710045420267752666408--------------76403056------8--
Q gi|254780486|r 91 -EKMLYFGSGYAANMAILST---LPQATDLIVYDKLVHASIREGINSGK--------------AQAIAIPH------N-- 144 (381)
Q Consensus 91 -e~al~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi~~g~~ls~--------------a~~~~f~H------n-- 144 (381)
+.+.+.+||..||.+++.. ..++.-+|-.+..-|.+-.-.+.+++ ...++|++ +
T Consensus 101 ~~~v~f~~SGSEAvE~AlKlAr~~tgr~~ii~~~~syHG~T~gals~tg~~~~~~~~~~~~~~~~~vp~p~~~r~~~~~~ 180 (443)
T PRK08360 101 NPKVSFGLSGGDANDGAIKFARAYTKRRKILSYMRSYYGSTYGAMSLTGLDFEVRAIVGELSDVHYIPYPNCYRCPFGKE 180 (443)
T ss_pred CCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCC
T ss_conf 67599748678899999999887629973874046657686010331377545455678999966817986435767888
Q ss_pred ----C---HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCE
Q ss_conf ----8---147899764310002478607971462157661346----89999986313608986131122234777640
Q gi|254780486|r 145 ----N---INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKG 213 (381)
Q Consensus 145 ----D---~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G 213 (381)
+ .+.|++.++.. ...+....|++|.|....|.+.| +++++++|++||++||+||++ +| +|++|..
T Consensus 181 ~~~~~~~~~~~l~~~~~~~--~~~~~iAAviiEPvqG~gG~~~pp~~yl~~lr~lc~~~gillI~DEV~-tG-fGRtG~~ 256 (443)
T PRK08360 181 PGSCKMECVEYLKEKFEGE--VYAEGVAALFAEPIQGDSGMVVPPENYFKKVKKILDEHGILLVVDEVQ-SG-LGRTGKW 256 (443)
T ss_pred CCHHHHHHHHHHHHHHHHC--CCCCCEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHCCCEEEEECCC-CC-CCCCCHH
T ss_conf 5213699999999998620--366875799986767888418688899768988777659079851130-38-7654405
Q ss_pred E-EEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 1-100001346521001346565302---675245100100001211000013577502578988789886271022478
Q gi|254780486|r 214 L-THIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSL 289 (381)
Q Consensus 214 ~-~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l 289 (381)
. .+++++.||++ ||+|++|+ | |.+++++++.+.+.....+ +|-+.+|..|++++++|+++++++ +.++.
T Consensus 257 fa~e~~gv~PDiv---~~gKgl~~-G~Pisav~~~~ei~~~~~~~~h~--~T~~gnpl~caaa~a~L~~i~~~~-l~~~~ 329 (443)
T PRK08360 257 FAIEHFGVEPDII---TLGKPLGG-GLPISATIGRAEIMDSLPPLSHA--FTLSGNPTASRAALAVIEEIEEKD-LLKRA 329 (443)
T ss_pred HHHHCCCCCCCEE---EECCCCCC-CCCCCCCCCHHHHHHHCCCCCCC--CCCCCCHHHHHHHHHHHHHHHHCC-HHHHH
T ss_conf 5764579698657---76344457-88862311149898504887656--687899799999999999998635-99999
Q ss_pred HHHHHHHHH----HHHCC--C-CCCCCCCEEEEEEC--------CHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEE
Q ss_conf 999999998----76417--9-78998972899958--------979999999999977918986228888888703999
Q gi|254780486|r 290 LQLINITDK----IANKK--I-GFSSQSHIQSIVIG--------DNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRI 354 (381)
Q Consensus 290 ~~~~~~~~~----~~~~~--~-g~~~~s~I~~v~~g--------d~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi 354 (381)
++..+++.+ +.... + .+.+..-+..+.+- ....+..+..+++++|+++.+. +...|||
T Consensus 330 ~~~G~~l~~~L~~l~~~~p~i~dVRG~Gl~~gie~v~d~~~~~~~~~~~~~i~~~~~~~Glli~~~-------~~~~i~~ 402 (443)
T PRK08360 330 EKLGNYTKKRLEEMKEKHELIGDVRGLGLMIGVDLVKDRETKERAYEETKKVVWRAFELGLIVTFF-------QGNVLRI 402 (443)
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEEC-------CCCEEEE
T ss_conf 999999999999988718988852036469999981277655445799999999999689388116-------9998999
Q ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 62878999999999999999988738
Q gi|254780486|r 355 SITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 355 ~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
.|+...|++|||+++++|+++++|.+
T Consensus 403 ~PPL~it~~eid~~~~~l~~al~ev~ 428 (443)
T PRK08360 403 EPPLTIEEEVLDEGLDILEEAIEDVE 428 (443)
T ss_pred ECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 79912899999999999999999998
No 64
>PRK05965 hypothetical protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=228.19 Aligned_cols=342 Identities=17% Similarity=0.180 Sum_probs=223.3
Q ss_pred HHCCCEEEECCCCEEEECCCCC---CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCC
Q ss_conf 9759839992897689803446---56677988999999999986378688722443688589999999984012--888
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSHD---YLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF--GFE 91 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~d---YLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~--g~e 91 (381)
+++|.|.++.||++||||.|.- -||- +||+|++|+.++++ +.... +..+.=.++.-.+|-++|++.+ +.+
T Consensus 34 ~a~G~~l~D~dG~~ylD~~sg~~~~~lGh-~hp~v~~Ai~~Q~~-~l~~~---~~~~~~~~~~~~~la~~L~~~~p~~l~ 108 (459)
T PRK05965 34 SAKGAFLTDASGHQLLDAFAGLWCVNVGY-GQESIVEAAAKQMR-KLPYA---TGYFHFGSEPAIRLAAELAERAPGSLN 108 (459)
T ss_pred EEEECEEEECCCCEEEECCHHHHHHHHHC-CCHHHHHHHHHHHH-HCCCC---CCCCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 62508899589999988686288656505-97999999999997-56773---566566866999999999985788868
Q ss_pred CEEEECCCCHHHHHHHHHH---------CCCCCCCCHHHHCCHHHHHHHHHCCC--------------CCE----EECC-
Q ss_conf 5167416602456556663---------16897100454202677526664087--------------640----3056-
Q gi|254780486|r 92 KMLYFGSGYAANMAILSTL---------PQATDLIVYDKLVHASIREGINSGKA--------------QAI----AIPH- 143 (381)
Q Consensus 92 ~al~~~sG~~An~~~i~~l---------~~~~d~ii~D~~~HaSi~~g~~ls~a--------------~~~----~f~H- 143 (381)
.+++++||..||.+++... .++.-+|-.+..-|.+-.-++-+++. ... .|+.
T Consensus 109 ~v~f~~SGSEAvE~AlKlar~y~~a~g~~~r~~ii~~~~syHG~T~~~~slt~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 188 (459)
T PRK05965 109 HVYFTLGGSDAVDSAVRFITHYWNATGRPSKKQFIALERGYHGSSSVGAGLTALPAFHRGFDLPLPWQHHIPSPYAYRNP 188 (459)
T ss_pred EEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
T ss_conf 79984867999999999999999972799875799971785899743102577743223568999986235788655687
Q ss_pred ----------CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCC
Q ss_conf ----------88147899764310002478607971462157661346----8999998631360898613112223477
Q gi|254780486|r 144 ----------NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGP 209 (381)
Q Consensus 144 ----------nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~ 209 (381)
+++++|++.+.+. .++....|++|.|.+..|.+.| |+++++||++||++||+||++ +| +|+
T Consensus 189 ~~~~~~~~~~~~~~~l~~~i~~~---~~~~vAAvi~EPi~g~gG~~~pp~~yl~~lr~lc~~~gillI~DEV~-TG-fGR 263 (459)
T PRK05965 189 VGDDPQAIIAASVAALEAKVAEL---GADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACRELGILFVADEVI-TG-FGR 263 (459)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHH---CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEEECC-CC-CCC
T ss_conf 88977889999999999999861---88757999954644668853287688799999987569179983054-17-762
Q ss_pred CCCE-EEEEHHCCCCCCCCCCCCCCCCCE---EEEEECCCCCCCCCCCCC---CC--EECCCCCCCCHHHHHHHHHHHHH
Q ss_conf 7640-110000134652100134656530---267524510010000121---10--00013577502578988789886
Q gi|254780486|r 210 LGKG-LTHIIEERNNVIVMHSCSKALGSS---GALVGSNKIIYDYLINYA---KP--FIYTTSPSPILAVVACEALKLIK 280 (381)
Q Consensus 210 ~G~G-~~~~~~~~~~~iv~~TlsKa~g~~---GG~i~~~~~ii~~l~~~~---~~--~ifst~l~P~~~aaa~aal~~l~ 280 (381)
+|.. .++++++.||++ ||+|++|+. -|.+++++++.+.+.... .+ +-+|-+.+|..|++++++|++++
T Consensus 264 tG~~fa~e~~gv~PDiv---~~gKgL~gG~~Plsav~~~~~i~~~~~~~~~~~~~~~hg~T~~gnpla~Aaa~a~L~~l~ 340 (459)
T PRK05965 264 TGPLFACEAEGVVPDLM---TVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVGLEVLRLYH 340 (459)
T ss_pred CCCCCCCCCCCCCCCEE---EECCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 44741003666188888---873434578675168976489998761156656544567789989899999999999998
Q ss_pred HCCCHHHHHHHHHHHHHHHHHC--CCC----CCCCCCEEEEEEC-C----------HHHHHHHHHHHHHCCEEEEEECCC
Q ss_conf 2710224789999999987641--797----8998972899958-9----------799999999999779189862288
Q gi|254780486|r 281 RKPALHKSLLQLINITDKIANK--KIG----FSSQSHIQSIVIG-D----------NKSCLNIAKNLQKKGFDIRAIRPP 343 (381)
Q Consensus 281 ~~~~~~~~l~~~~~~~~~~~~~--~~g----~~~~s~I~~v~~g-d----------~~~a~~~~~~L~~~Gi~v~~i~~P 343 (381)
++. +.++.++..+++.+.... ..+ +.+..-+..|.+- | ...+..+.++++++|+++.+.
T Consensus 341 ~~~-l~~~~~~~g~~l~~~L~~L~~~p~i~dVRG~GLm~gielv~d~~~~~~~~~~~~~~~~i~~~~~~~Glli~~~--- 416 (459)
T PRK05965 341 EGG-LLANGQAAAPRFAAGLDALRAHPLVGDVRGRGLLGALELVADKASKTPFDAALEPADRIFDRAYANGLVFRAF--- 416 (459)
T ss_pred HCC-HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEC---
T ss_conf 634-9999999999999999987649976867825627999971265446677554799999999999699299807---
Q ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 888887039996287899999999999999998873
Q gi|254780486|r 344 TVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 344 tVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
+...|||+|+...|++|||.++++|+++++|.
T Consensus 417 ----g~~vl~l~PPL~It~~eid~~~~~l~~al~ev 448 (459)
T PRK05965 417 ----GDGVLGFAPALCCTEGEFDLIFERTRKTLDDV 448 (459)
T ss_pred ----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf ----99989997882089999999999999999999
No 65
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=100.00 E-value=6.4e-33 Score=225.35 Aligned_cols=342 Identities=18% Similarity=0.221 Sum_probs=229.0
Q ss_pred HHHHCCCEEEECCCCEEEECCCCCC---CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--C
Q ss_conf 9997598399928976898034465---6677988999999999986378688722443688589999999984012--8
Q gi|254780486|r 15 KIKSKGRHRQLLRRQDIWDFTSHDY---LALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF--G 89 (381)
Q Consensus 15 ~~~~~g~~~~~~~~~~~l~f~s~dY---LGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~--g 89 (381)
-.+++|.|.+..+|++||||.|.-. ||- +||+|.+|+.++++ +....+ .+ ...++...+|-++|++.. +
T Consensus 35 i~~a~G~~l~D~dG~~ylD~~sg~~~~~lGh-~hp~i~~Ai~~Q~~-~l~~~~---~~-~~~~~~~~~lae~L~~~~p~~ 108 (445)
T PRK09221 35 LVSAEGMYYTDADGRKILDGTAGLWCCNAGH-GRPEIVEAVARQAA-TLDYAP---AF-QMGHPLAFELAERLAELAPGG 108 (445)
T ss_pred EEEEECCEEEECCCCEEEECCCCHHHCCCCC-CCHHHHHHHHHHHH-HCCCCC---CC-CCCCHHHHHHHHHHHHHCCCC
T ss_conf 9970539899699899999672687411478-97999999999986-568724---55-568889999999999848887
Q ss_pred CCCEEEECCCCHHHHHHHHHH---------CCCCCCCCHHHHCCHHHHHHHHHCC--------------CCCEEECCCC-
Q ss_conf 885167416602456556663---------1689710045420267752666408--------------7640305688-
Q gi|254780486|r 90 FEKMLYFGSGYAANMAILSTL---------PQATDLIVYDKLVHASIREGINSGK--------------AQAIAIPHNN- 145 (381)
Q Consensus 90 ~e~al~~~sG~~An~~~i~~l---------~~~~d~ii~D~~~HaSi~~g~~ls~--------------a~~~~f~HnD- 145 (381)
.+.+++++||..||.+++..- .++..+|-.+..-|.+-.-+.-+++ ....+++++.
T Consensus 109 l~~v~f~~SGsEAvE~AiKlAr~y~~~~g~~~r~~ii~~~~syHG~t~g~~s~~g~~~~~~~f~~~~~~~~~~p~~~~~~ 188 (445)
T PRK09221 109 LDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKMFGGLLPGVDHLPHTLDLP 188 (445)
T ss_pred CCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCC
T ss_conf 58799608789999999999999999719997526962037747997220002688543435678899944716876665
Q ss_pred ---------------HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCC
Q ss_conf ---------------147899764310002478607971462157661346----8999998631360898613112223
Q gi|254780486|r 146 ---------------INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGV 206 (381)
Q Consensus 146 ---------------~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv 206 (381)
.+++|+.+... .+.....|++|.|-+..|.+.| |+++++||++||++||+||++ +|
T Consensus 189 ~~~~~~~~~~~~~~~a~~le~~i~~~---~~~~iAaviiEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEVq-tG- 263 (445)
T PRK09221 189 ENAFSKGLPEHGAELADELERLVALH---DASNIAAVIVEPMAGSAGVLVPPKGYLQRLREICDKHGILLIFDEVI-TG- 263 (445)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHC---CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCC-CC-
T ss_conf 43345676067899999999999853---98766899977755778714188899999999987558489984153-17-
Q ss_pred CCCCCCEE-EEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCC---CCCEEC--CCCCCCCHHHHHHHHHH
Q ss_conf 47776401-100001346521001346565302---6752451001000012---110000--13577502578988789
Q gi|254780486|r 207 CGPLGKGL-THIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINY---AKPFIY--TTSPSPILAVVACEALK 277 (381)
Q Consensus 207 ~G~~G~G~-~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~---~~~~if--st~l~P~~~aaa~aal~ 277 (381)
+|++|+.. .+++++.||++ ||||++++.+ |.+++++++.+.+... ...|.+ |-+.+|..|++++++|+
T Consensus 264 ~GRtG~~fa~e~~gv~PDiv---~~gKgl~gG~~Plsav~~~~ei~d~~~~~~~~~~~~~hg~T~~gnpla~aaa~a~L~ 340 (445)
T PRK09221 264 FGRLGAAFAAERFGVTPDLI---TFAKGLTNGAIPMGAVIASDEIYDAFMQGPEYAIEFFHGYTYSGHPVACAAGLATLD 340 (445)
T ss_pred CCCCCCCCEEECCCCCCCEE---EECCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 88135761240576799867---763435678775489996578999760387555323346678889899999999999
Q ss_pred HHHHCCCHHHHHHHHHHHHHHHHHC--CCC----CCCCCCEEEEEEC----C-HHHHHHHHHHHHHCCEEEEEECCCCCC
Q ss_conf 8862710224789999999987641--797----8998972899958----9-799999999999779189862288888
Q gi|254780486|r 278 LIKRKPALHKSLLQLINITDKIANK--KIG----FSSQSHIQSIVIG----D-NKSCLNIAKNLQKKGFDIRAIRPPTVP 346 (381)
Q Consensus 278 ~l~~~~~~~~~l~~~~~~~~~~~~~--~~g----~~~~s~I~~v~~g----d-~~~a~~~~~~L~~~Gi~v~~i~~PtVp 346 (381)
+++++. +.++..+..+++.+.... ... +.+..-+..|.+. . ...+.++...++++|+++.+.
T Consensus 341 ~i~~~~-l~~~~~~~g~~l~~~L~~L~~~~~v~dVRG~Glm~giel~~~~~~~~~~~~~~~~~~~~~Gll~~~~------ 413 (445)
T PRK09221 341 IYREED-LFERAAELAPYFEDAVHSLKGLPHVIDIRNYGLVAGIELAPRPGAPGKRGYEAFMKCFEKGLLVRYT------ 413 (445)
T ss_pred HHHHCC-HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEEC------
T ss_conf 998646-9999999999999999986269975987504089999985788855578999999999699289637------
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 887039996287899999999999999998873
Q gi|254780486|r 347 INTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 347 ~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
| ..|||.|+...|++|||.++++|+++++|.
T Consensus 414 -g-~~lrl~PPL~it~~eid~~~~~l~~al~~v 444 (445)
T PRK09221 414 -G-DTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred -C-CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf -9-979998993489999999999999999986
No 66
>PRK07483 hypothetical protein; Provisional
Probab=100.00 E-value=7.1e-33 Score=225.08 Aligned_cols=349 Identities=14% Similarity=0.181 Sum_probs=228.1
Q ss_pred HHHCCCEEEECCCCEEEECCCCC---CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CC
Q ss_conf 99759839992897689803446---56677988999999999986378688722443688589999999984012--88
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSHD---YLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF--GF 90 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~d---YLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~--g~ 90 (381)
.+++|.+.++.||++||||.|.- -||- +||+|++++.++++ +.+... +..+ .++.-.+|-++|++.. +.
T Consensus 17 v~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~q~~-~l~~~~--~~~~--~~~~~~~Lae~L~~~~p~~~ 90 (443)
T PRK07483 17 VAGDGIYIIDSTGKRYLDASGGAAVSCLGH-SHPRVIAAIKAQID-RLAYAH--TSFF--TTEPAEALADRLVAAAPAGL 90 (443)
T ss_pred EEEECCEEEECCCCEEEECCCCHHHHHHCC-CCHHHHHHHHHHHH-HCCCCC--CCCC--CCHHHHHHHHHHHHHCCCCC
T ss_conf 965559899799799998351889774479-97999999999983-368744--5755--77899999999998578885
Q ss_pred CCEEEECCCCHHHHHHHHHH---------CCCCCCCCHHHHCCHHHHHHHHHCCC--------------CCE--EECCCC
Q ss_conf 85167416602456556663---------16897100454202677526664087--------------640--305688
Q gi|254780486|r 91 EKMLYFGSGYAANMAILSTL---------PQATDLIVYDKLVHASIREGINSGKA--------------QAI--AIPHNN 145 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~l---------~~~~d~ii~D~~~HaSi~~g~~ls~a--------------~~~--~f~HnD 145 (381)
+.+.+++||..||..++..- .++..+|-.+..-|....-...+++- ..+ .|++++
T Consensus 91 ~~v~f~~sGsEAve~AiklAr~y~~~~g~~~r~~ii~~~~~yHG~t~gals~sg~~~~~~~~~p~~~~~~~~~p~~~~~~ 170 (443)
T PRK07483 91 EHVYFVSGGSEAVEAALKLARQYFVEKGQPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYRD 170 (443)
T ss_pred CEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCHHHCCCCCCCCCCCCCCCCCCEEECCCCCCCC
T ss_conf 87999686688999999999999987189987289998378878850011014761015888888888444068875445
Q ss_pred --------------HHHHHHHHHHHHHCCCCCCCEEEECCCCC-CCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCC
Q ss_conf --------------14789976431000247860797146215-7661346----8999998631360898613112223
Q gi|254780486|r 146 --------------INSFAENINKWRKSGGKGFPWIVVESIYS-MDGDKAP----LDDLVKIANDYDGFIVVDEAHATGV 206 (381)
Q Consensus 146 --------------~~~Le~~l~~~~~~~~~~~~~vv~egv~S-m~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv 206 (381)
.++||..+.+ ..++....|++|.|-. ..|.+.| |++++++|++||++||+||++ +|
T Consensus 171 ~~~~~~~~~~~~~~~~~le~~i~~---~~~~~iAavi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~gillI~DEV~-tG- 245 (443)
T PRK07483 171 QRAGETDEAYGQRLADELEAKILE---LGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVM-CG- 245 (443)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHH---HCCCCEEEEEEECCCCCCCCCEECCHHHHHHHHHHHHHCCEEEEEECCC-CC-
T ss_conf 678888789999999999999986---0888678999834304758854488899999999998669589996152-27-
Q ss_pred CCCCCCE-EEEEHHCCCCCCCCCCCCCCCCCE---EEEEECCCCCCCCCCCCCCCEEC--CCCCCCCHHHHHHHHHHHHH
Q ss_conf 4777640-110000134652100134656530---26752451001000012110000--13577502578988789886
Q gi|254780486|r 207 CGPLGKG-LTHIIEERNNVIVMHSCSKALGSS---GALVGSNKIIYDYLINYAKPFIY--TTSPSPILAVVACEALKLIK 280 (381)
Q Consensus 207 ~G~~G~G-~~~~~~~~~~~iv~~TlsKa~g~~---GG~i~~~~~ii~~l~~~~~~~if--st~l~P~~~aaa~aal~~l~ 280 (381)
+|++|.. ..+++++.||++ ||||++|+. =|.+++++++.+.+....+.|.+ |-+.+|..|++++++|++++
T Consensus 246 fGRtG~~fa~e~~gv~PDiv---~~gKgl~gG~~Pl~a~~~~~~i~~~~~~~~~~~~hg~T~~gnpla~aaa~a~L~~i~ 322 (443)
T PRK07483 246 MGRTGTLFACEEDGVAPDLL---TIAKGLGAGYQPIGAVLASDRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIA 322 (443)
T ss_pred CCCCCCCCCCCCCCCCCCCE---EECCCCCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 88543775300045589810---133322488773279975689997543687533458888899899999999999998
Q ss_pred HCCCHHHHHHHHHHHHHH-HHH--CCCC----CCCCCCEEEEEEC---------CH--HHHHHHHHHHHHCCEEEEEECC
Q ss_conf 271022478999999998-764--1797----8998972899958---------97--9999999999977918986228
Q gi|254780486|r 281 RKPALHKSLLQLINITDK-IAN--KKIG----FSSQSHIQSIVIG---------DN--KSCLNIAKNLQKKGFDIRAIRP 342 (381)
Q Consensus 281 ~~~~~~~~l~~~~~~~~~-~~~--~~~g----~~~~s~I~~v~~g---------d~--~~a~~~~~~L~~~Gi~v~~i~~ 342 (381)
+++ +.++.++..+++.+ +.. ...+ +.+..-+..|.+- |+ ..+..+...++++|+++.+...
T Consensus 323 ~~~-l~~~~~~~g~~l~~~L~~l~~~~p~I~dVRG~GLm~gielv~~~~~~~~~d~~~~~~~~i~~~~~~~Gll~~~~g~ 401 (443)
T PRK07483 323 EDG-LLANVRARGEQLRARLRERLGQHPHVGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGG 401 (443)
T ss_pred HCC-HHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEECCC
T ss_conf 646-9999999999999999999864997788540414899997326765677775689999999999978958987777
Q ss_pred CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 8888887039996287899999999999999998873
Q gi|254780486|r 343 PTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 343 PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
-........|||.|+...|++|||.++++|++++++-
T Consensus 402 ~~~g~~~~~i~l~PPL~it~~eid~~i~~l~~aL~~v 438 (443)
T PRK07483 402 TIDGVRGDHVLLAPPFIITAQQIDEIVERLGDAIDAA 438 (443)
T ss_pred CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 6457769989998996289999999999999999999
No 67
>PRK03715 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=4.3e-33 Score=226.40 Aligned_cols=333 Identities=17% Similarity=0.263 Sum_probs=226.7
Q ss_pred HHHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
Q ss_conf 9975983999289768980344---6566779889999999999863786887224436885899999999840128885
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEK 92 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~ 92 (381)
-+++|.|.+..+|++||||.|. +-||- +||+|.+|+.+++++.. ++ +..+ .++...+|.++|++..+.+.
T Consensus 23 ~ra~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~Q~~~l~--~~--~~~~--~~~~~~~la~~L~~~~~~~~ 95 (395)
T PRK03715 23 THGKGSWLYDHTGKRYLDFIQGWAVNCLGH-CNPGMVEALAAQAEKLI--NP--SPAF--YNEPMAKLAGLLTQHSCFDK 95 (395)
T ss_pred EEEECCEEEECCCCEEEECCCCHHHHHHCC-CCHHHHHHHHHHHHHCC--CC--CCCC--CCHHHHHHHHHHHCCCCCCE
T ss_conf 983548899798799988231788777458-96999999999997547--67--7320--27899999999841558887
Q ss_pred EEEECCCCHHHHHHHHHH--------CCCCCCCCHHHHCCHHHHHHHHHCCCC---------CEEEC---CCCHHHHHHH
Q ss_conf 167416602456556663--------168971004542026775266640876---------40305---6881478997
Q gi|254780486|r 93 MLYFGSGYAANMAILSTL--------PQATDLIVYDKLVHASIREGINSGKAQ---------AIAIP---HNNINSFAEN 152 (381)
Q Consensus 93 al~~~sG~~An~~~i~~l--------~~~~d~ii~D~~~HaSi~~g~~ls~a~---------~~~f~---HnD~~~Le~~ 152 (381)
+++++||..||.+++..- .++..+|..+..-|.+-.-+..+++.+ ..-|+ .||++++++.
T Consensus 96 v~f~~sGsEAvE~AlKlAr~y~~~~~~gr~~ii~~~~~yHG~T~~~~s~sg~~~~~~~~~p~~~~~~~~~~~d~~~~~~~ 175 (395)
T PRK03715 96 VFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLATMSASGKPGWDTIFAPQVPGFPKAELNDIASVEKL 175 (395)
T ss_pred EEEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 99818758899999999999862468998459997578898740221046864445567898899675554558999973
Q ss_pred HHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCE-EEEEHHCCCCCCCC
Q ss_conf 64310002478607971462157661346----89999986313608986131122234777640-11000013465210
Q gi|254780486|r 153 INKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKG-LTHIIEERNNVIVM 227 (381)
Q Consensus 153 l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G-~~~~~~~~~~~iv~ 227 (381)
+. +...-|++|.|.+..|.+.| +++++++|++||++||+||++ +| +|++|+. ..+++++.||++
T Consensus 176 ~~-------~~~aAviiEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~-tG-fGRtG~~fa~e~~gv~PDiv-- 244 (395)
T PRK03715 176 IT-------DKTVAVMLEPVQGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQ-TG-CGRTGTLFAYELAGIEPDIM-- 244 (395)
T ss_pred CC-------CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCC-CC-CCCCCCCCCCCCCCCCCCEE--
T ss_conf 49-------980799993788877985298899999999995189735620110-38-88666853000489999989--
Q ss_pred CCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-H---HH
Q ss_conf 01346565302---67524510010000121100001357750257898878988627102247899999999-8---76
Q gi|254780486|r 228 HSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITD-K---IA 300 (381)
Q Consensus 228 ~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~-~---~~ 300 (381)
||||++|+ | |.+++++++..+ .....+ .|-+.+|..|++++++|++++++. +.++.+++.+++. + +.
T Consensus 245 -~~gKgl~g-G~Pl~av~~~~~i~~~-~~g~~g--~T~~gnpla~aaa~a~L~~i~~~~-l~~~~~~~g~~l~~~L~~l~ 318 (395)
T PRK03715 245 -TLGKGIGG-GVPLAALLAKAEVAVF-EAGDQG--GTYNGNPLMTAVGYAVISQLVAPG-FLEGVRARGEYLKEKLLELS 318 (395)
T ss_pred -EECCHHHC-CCCEEEEEECHHHCCC-CCCCCC--CCCCCCHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHHHHHH
T ss_conf -97524428-9852899982674247-789888--798997189999999999996268-99999999999999999865
Q ss_pred HCC--CCCCCCCCEEEEEECCH--HHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 417--97899897289995897--99999999999779189862288888887039996287899999999999999998
Q gi|254780486|r 301 NKK--IGFSSQSHIQSIVIGDN--KSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 301 ~~~--~g~~~~s~I~~v~~gd~--~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
... .+..+..-+..+.+..+ ....+.+..+.++|+++.. | +...|||+|+...|++|||+++++|++++
T Consensus 319 ~~~~i~~vRG~Gl~~~iel~~~~~~~~~~~~~~~~~~gll~~~------~-~~n~irl~PpL~it~~eid~~~~~l~~aL 391 (395)
T PRK03715 319 AERGLEGERGEGLLRALLLGKDIGPQIVEKARDMQPDGLLLNA------P-RPNLLRFMPALNVTTDEIDQMIAMLRSVL 391 (395)
T ss_pred CCCCCEEEEECCEEEEEEECCCCCHHHHHHHHHHHHCCEEEEC------C-CCCEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 0399135743558999996788708999999999839989922------8-99989997994388999999999999999
Q ss_pred HHH
Q ss_conf 873
Q gi|254780486|r 377 SEG 379 (381)
Q Consensus 377 ~E~ 379 (381)
+|+
T Consensus 392 ~~l 394 (395)
T PRK03715 392 DKL 394 (395)
T ss_pred HHH
T ss_conf 986
No 68
>PRK07481 hypothetical protein; Provisional
Probab=100.00 E-value=3.9e-33 Score=226.69 Aligned_cols=346 Identities=14% Similarity=0.186 Sum_probs=226.0
Q ss_pred HHHCCCEEEECCCCEEEECCCCC---CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC---C
Q ss_conf 99759839992897689803446---56677988999999999986378688722443688589999999984012---8
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSHD---YLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF---G 89 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~d---YLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~---g 89 (381)
.+++|.|.++.||++||||.|.- =||- +||+|.+|+.++++ +....+. +-.-.++.-.+|.++|.+.+ +
T Consensus 29 ~~g~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~q~~-~~~~~~~---~~~~~~~~~~~la~~L~~~~~p~~ 103 (448)
T PRK07481 29 VRGDGCYVYDIDGKKLLDGVGGLWNVNVGH-NREEVKEAIVRQLD-ELEYYST---FDGTTHPRAIELSYKLIDMFEPEG 103 (448)
T ss_pred EEEECCEEEECCCCEEEECCCCHHHHHHCC-CCHHHHHHHHHHHH-HCCCCCC---CCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 971518899698899999543588633257-97999999999996-5677136---664468899999999998518778
Q ss_pred CCCEEEECCCCHHHHHHHHHHC---------CCCCCCCHHHHCCHHHHHHHHHCCC--------------CCEEE-----
Q ss_conf 8851674166024565566631---------6897100454202677526664087--------------64030-----
Q gi|254780486|r 90 FEKMLYFGSGYAANMAILSTLP---------QATDLIVYDKLVHASIREGINSGKA--------------QAIAI----- 141 (381)
Q Consensus 90 ~e~al~~~sG~~An~~~i~~l~---------~~~d~ii~D~~~HaSi~~g~~ls~a--------------~~~~f----- 141 (381)
.+.+++.+||..||..++..-- ++.-+|-.+..-|..-.-.+.+++. ..+.+
T Consensus 104 ~~rv~f~~SGseA~E~AiKlAr~y~~~~g~~~r~~Ii~~~~syHG~t~g~~s~sg~~~~~~~~~~~~~~~~~~~~p~~~~ 183 (448)
T PRK07481 104 MRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYR 183 (448)
T ss_pred CCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCC
T ss_conf 78899749779999999999999999718988636996368637766221214688434468889999827826875223
Q ss_pred -CCC-CHHHHHHH----HHHH-HHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCC
Q ss_conf -568-81478997----6431-0002478607971462157661346----89999986313608986131122234777
Q gi|254780486|r 142 -PHN-NINSFAEN----INKW-RKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPL 210 (381)
Q Consensus 142 -~Hn-D~~~Le~~----l~~~-~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~ 210 (381)
+-| |.+++.+. +++. ....+.....|++|.|-+..|.+.| |+++++||++||++||+||++ +| +|++
T Consensus 184 ~p~~~~~~~~~~~~~~~le~~i~~~~~~~iAavi~EPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~-tG-fGRt 261 (448)
T PRK07481 184 NPFTQDPEELGRLCARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANYWPLVREVCDRHGILLIADEVV-TG-FGRT 261 (448)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEECCCHHHHHHHHHHHHHCCEEEEEEECC-CC-CCCC
T ss_conf 777899899999999999999874188847999960466679714599999999999999779279995145-38-8847
Q ss_pred CCEE-EEEHHCCCCCCCCCCCCCCCCCE---EEEEECCCCCCCCCCCCC---CCEE--CCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 6401-10000134652100134656530---267524510010000121---1000--0135775025789887898862
Q gi|254780486|r 211 GKGL-THIIEERNNVIVMHSCSKALGSS---GALVGSNKIIYDYLINYA---KPFI--YTTSPSPILAVVACEALKLIKR 281 (381)
Q Consensus 211 G~G~-~~~~~~~~~~iv~~TlsKa~g~~---GG~i~~~~~ii~~l~~~~---~~~i--fst~l~P~~~aaa~aal~~l~~ 281 (381)
|... .+++++.|+++ ||||++|+. -|.+++++++.+.+.... ..+. +|-+.+|..|++++++|+++++
T Consensus 262 G~~fa~e~~gv~PDiv---~~gK~lggG~~Plsa~~~~~~i~~~~~~~~~~~~~~~hg~T~~gnpla~aaala~L~~i~~ 338 (448)
T PRK07481 262 GSWFGSRGWGVKPDIM---CLAKGISSGYVPLGATMVNARIEDAFEANADFGGAIMHGYTYSGHPVACAAALASLDIVVR 338 (448)
T ss_pred CCHHHHHCCCCCCCEE---EECCCCCCCCCCCCHHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 6325765689999710---0122435897764211156899997656887665210066778897999999999999975
Q ss_pred CCCHHHHHHHHHHHHH-HHH--HCCCC----CCCCCCEEEEEE-C----------CHHHHHHHHHHHHHCCEEEEEECCC
Q ss_conf 7102247899999999-876--41797----899897289995-8----------9799999999999779189862288
Q gi|254780486|r 282 KPALHKSLLQLINITD-KIA--NKKIG----FSSQSHIQSIVI-G----------DNKSCLNIAKNLQKKGFDIRAIRPP 343 (381)
Q Consensus 282 ~~~~~~~l~~~~~~~~-~~~--~~~~g----~~~~s~I~~v~~-g----------d~~~a~~~~~~L~~~Gi~v~~i~~P 343 (381)
++ +.++.+++.+++. ++. ....+ +.+...+..|.+ . ....+..+.+.++++|+++.+.
T Consensus 339 ~~-l~~~~~~~g~~l~~~L~~l~~~~~~i~~VRG~Glm~~ielv~d~~~~~~~~~~~~~~~~v~~~~~~~Gll~~~~--- 414 (448)
T PRK07481 339 ED-LPANAAKRGAYLLEGLQPLVERFELVGDVRGKGLMVALDLVADKATRAPIDPSKGYANAVADVARENGVLVRPS--- 414 (448)
T ss_pred CC-HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEC---
T ss_conf 56-99999999999999999999848984675522499999996066556767712799999999999699499724---
Q ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 8888870399962878999999999999999988738
Q gi|254780486|r 344 TVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 344 tVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
| ..+|++|+..+|++|||+++++|+++++|.-
T Consensus 415 ----g-~~i~~~PpL~it~~eid~~l~~l~~al~~v~ 446 (448)
T PRK07481 415 ----G-TKIILSPPLVIQREDVDRIVDALDAGFAAVP 446 (448)
T ss_pred ----C-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf ----9-9899989978899999999999999999753
No 69
>PRK06541 hypothetical protein; Provisional
Probab=100.00 E-value=4.2e-33 Score=226.50 Aligned_cols=347 Identities=15% Similarity=0.169 Sum_probs=227.4
Q ss_pred HHHCCCEEEECCCCEEEECCCCC---CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CC
Q ss_conf 99759839992897689803446---56677988999999999986378688722443688589999999984012--88
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSHD---YLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF--GF 90 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~d---YLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~--g~ 90 (381)
.+++|.|.++.+|++||||.|+- -||- +||+|.+|+.+++. +....+.. + ..++...+|-++|+++. +.
T Consensus 39 ~rg~G~~l~D~dG~~ylD~~~g~~~~~lGH-~hp~v~~Ai~~Q~~-~l~~~~~~-~---~~~~~~~~lae~L~~~~p~~l 112 (460)
T PRK06541 39 VRGEGVYIWDDRGKRYLDGLAGLFVVQVGH-GRAELAEAAAEQAG-TLAFFPLW-S---YAHPPAIELAERLAALAPGDL 112 (460)
T ss_pred EECCCCEEEECCCCEEEECCCCHHHHHCCC-CCHHHHHHHHHHHH-HCCCCCCC-C---CCCHHHHHHHHHHHHHCCCCC
T ss_conf 966149899699999999651487531178-98999999999997-57875677-5---578799999999997488886
Q ss_pred CCEEEECCCCHHHHHHHHHH---------CCCCCCCCHHHHCCHHHHHHHHHCCCC--------------CE--------
Q ss_conf 85167416602456556663---------168971004542026775266640876--------------40--------
Q gi|254780486|r 91 EKMLYFGSGYAANMAILSTL---------PQATDLIVYDKLVHASIREGINSGKAQ--------------AI-------- 139 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~l---------~~~~d~ii~D~~~HaSi~~g~~ls~a~--------------~~-------- 139 (381)
+.+.+.+||..||..++..- .++..+|-.+..-|.+-.-...+++-. ..
T Consensus 113 ~~v~f~~SGsEA~E~AiklAr~y~~~~G~~~r~~iis~~~~yHG~t~ga~s~tg~~~~~~~~~p~~~g~~~vp~~~~~~~ 192 (460)
T PRK06541 113 NRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAPFEPLTPGGFRVPNTNFYRA 192 (460)
T ss_pred CEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCHHHHHHCCCHHHCCCCCCCCCCCEECCCCCCCCC
T ss_conf 98997087489999999999999996199986189996687167865788751880003788788999167688864457
Q ss_pred EECCCCHHHHHH----HHHH-HHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCC
Q ss_conf 305688147899----7643-10002478607971462157661346----89999986313608986131122234777
Q gi|254780486|r 140 AIPHNNINSFAE----NINK-WRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPL 210 (381)
Q Consensus 140 ~f~HnD~~~Le~----~l~~-~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~ 210 (381)
++..+|.+...+ .+++ .....++....|++|.|.+..|.+.| +++|+++|++||++||+||++ +| +|++
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavI~EPi~g~gG~~~~~~~fl~~lr~lc~~~gillI~DEVq-tG-fGRt 270 (460)
T PRK06541 193 PEHGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDRYDVLLVSDEVI-CA-FGRL 270 (460)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCE-EC-CCCC
T ss_conf 767899889999999999999985199857899845777878865686899999999746479537667512-07-8653
Q ss_pred CCE-EEEEHHCCCCCCCCCCCCCCCCCE---EEEEECCCCCCCCCCCCCCCEE--CCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 640-110000134652100134656530---2675245100100001211000--0135775025789887898862710
Q gi|254780486|r 211 GKG-LTHIIEERNNVIVMHSCSKALGSS---GALVGSNKIIYDYLINYAKPFI--YTTSPSPILAVVACEALKLIKRKPA 284 (381)
Q Consensus 211 G~G-~~~~~~~~~~~iv~~TlsKa~g~~---GG~i~~~~~ii~~l~~~~~~~i--fst~l~P~~~aaa~aal~~l~~~~~ 284 (381)
|+. ..+++++.|+++ ||||++|+. =|.+++++++.+.+..-...|. .|-+.+|..|++++++|++++++.
T Consensus 271 G~~fa~e~~gv~PDiv---~~gKglg~G~~Pl~av~~~~~i~~~~~~~~~~~~hg~T~~gnpla~aaa~avL~~i~~~~- 346 (460)
T PRK06541 271 GEMFGCERFGYVPDII---TCAKGITSGYSPLGAMIASDRLVEPFLDGKTMFLHGYTFGGHPVSAAVALANLDIFEREG- 346 (460)
T ss_pred CCCCHHCCCCCCCCHH---HHHHHCCCCCCCCEEEECCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC-
T ss_conf 3732201689489514---122312588777046740399987652688531357678889899999999999998657-
Q ss_pred HHHHHHHHHHHHHHHHHC--CCC----CCCCCCEEEEEECC---------HHH-----HHHHHHHHHHCCEEEEEECCCC
Q ss_conf 224789999999987641--797----89989728999589---------799-----9999999997791898622888
Q gi|254780486|r 285 LHKSLLQLINITDKIANK--KIG----FSSQSHIQSIVIGD---------NKS-----CLNIAKNLQKKGFDIRAIRPPT 344 (381)
Q Consensus 285 ~~~~l~~~~~~~~~~~~~--~~g----~~~~s~I~~v~~gd---------~~~-----a~~~~~~L~~~Gi~v~~i~~Pt 344 (381)
+.++.++...++.+.... ..+ +.+..-+..|.+-+ ... ...+.+.|+++|+++.+..
T Consensus 347 l~~~v~~~G~~l~~~L~~l~~~p~v~dVRG~GL~~giElv~d~~~~~~~~~~~~~~~~~~~l~~~~~~~Gl~~~~~~--- 423 (460)
T PRK06541 347 LLDHVRDNEPAFRATLEKLLDLPIVGDVRGDGYFYGIELVKDKATKETFTDDESERLLRGFLSPALFEAGLYCRADD--- 423 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEECC---
T ss_conf 99999999999999999974699778741077389999545765456676467789999999999997895997458---
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 88887039996287899999999999999998873
Q gi|254780486|r 345 VPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 345 Vp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
.+...|||.|+...|++|||.++++|+++++|.
T Consensus 424 --~~~~virl~PPL~it~~eid~~l~~l~~aL~e~ 456 (460)
T PRK06541 424 --RGDPVVQLAPPLISGQEEFDEIEAILRSVLTEA 456 (460)
T ss_pred --CCCCEEEEECCEECCHHHHHHHHHHHHHHHHHH
T ss_conf --999889997893378999999999999999999
No 70
>PRK07482 hypothetical protein; Provisional
Probab=100.00 E-value=4.5e-33 Score=226.30 Aligned_cols=345 Identities=17% Similarity=0.136 Sum_probs=224.5
Q ss_pred HHHCCCEEEECCCCEEEECCCCCC-CCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--CC
Q ss_conf 997598399928976898034465-6677-9889999999999863786887224436885899999999840128--88
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSHDY-LALS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG--FE 91 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~dY-LGl~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g--~e 91 (381)
-+++|.|.++.||++||||.|.-. +.|. +||+|.+|+.++++ +..+.... ..-.++...+|.++|+++.. .+
T Consensus 37 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGH~~p~v~~Ai~~Q~~-~l~~~~~~---~~~~~~~~~~lAe~L~~~~p~~l~ 112 (461)
T PRK07482 37 AGGEGIRITDHQGRRYIDAFAGLYCVNVGYGRTEVAEAIAEQAK-ELAYYHTY---VGHGTEASIELSKRIIDRAPAGMS 112 (461)
T ss_pred EEEEEEEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHH-HCCCCCCC---CCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 96424689979999999966358864257694999999999996-58761146---775688999999999975788868
Q ss_pred CEEEECCCCHHHHHHHHHH------CC---CCCCCCHHHHCCHHHHHHHHHCC--------------CCCEEE----CCC
Q ss_conf 5167416602456556663------16---89710045420267752666408--------------764030----568
Q gi|254780486|r 92 KMLYFGSGYAANMAILSTL------PQ---ATDLIVYDKLVHASIREGINSGK--------------AQAIAI----PHN 144 (381)
Q Consensus 92 ~al~~~sG~~An~~~i~~l------~~---~~d~ii~D~~~HaSi~~g~~ls~--------------a~~~~f----~Hn 144 (381)
.+++++||..||.+++..- .+ +..+|-.+.--|..-.-..-+++ .....+ +..
T Consensus 113 ~v~f~~SGSEAvE~AiKlAr~y~~~~g~~~r~~Iis~~~syHG~T~~a~s~tg~~~~~~~~~~~~~~~~~~~~P~~~~~~ 192 (461)
T PRK07482 113 KVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGIVTGSLTGLSLFHQHFDLPIDRVLHTEAPHYYRRA 192 (461)
T ss_pred EEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
T ss_conf 79961866999999999999998861887654599961785567531300246633346667998783224688545678
Q ss_pred C------------HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCC
Q ss_conf 8------------147899764310002478607971462157661346----899999863136089861311222347
Q gi|254780486|r 145 N------------INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCG 208 (381)
Q Consensus 145 D------------~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G 208 (381)
+ .++||+.+.+. .+.....|++|.|-+..|.+.| |+++++||++||++||+||++ +| +|
T Consensus 193 ~~~~~~~~~~~~~~~~le~~i~~~---~~~~iAAvI~EPi~g~gG~~~p~~~yl~~lr~lc~~~gilLI~DEV~-tG-fG 267 (461)
T PRK07482 193 DAGMSEEQFSAYCADELEELILAE---GPDTIAAFIGEPVLGTGGIVPPPAGYWEAIQAVLKKYDILLIADEVV-TG-FG 267 (461)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHH---CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCE-EC-CC
T ss_conf 866337777899999999999850---98848999805635768855188789799999962459637715443-24-75
Q ss_pred CCCCEE-EEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCC---CCE--ECCCCCCCCHHHHHHHHHHHH
Q ss_conf 776401-100001346521001346565302---67524510010000121---100--001357750257898878988
Q gi|254780486|r 209 PLGKGL-THIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYA---KPF--IYTTSPSPILAVVACEALKLI 279 (381)
Q Consensus 209 ~~G~G~-~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~---~~~--ifst~l~P~~~aaa~aal~~l 279 (381)
|+|+.. .+++++.||++ ||+|++|+.. |.+++++++.+.+.... .++ -+|-+.+|..|++++++|+++
T Consensus 268 RtG~~fa~e~~gv~PDiv---~~gKgl~gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~h~~T~~GnPlacAaa~a~L~~l 344 (461)
T PRK07482 268 RLGSMFGSQHYGIEPDLI---TIAKGLTSAYAPLSGSIVGEKVWDVLEQGSDEHGAMGHGWTYSGHPICAAAALANLDIL 344 (461)
T ss_pred CCCCCCHHCCCCCCCCEE---EECCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 035841111689999777---63244457767627998568899876326544666401568999989999999999998
Q ss_pred HHCCCHHHHHHHHHHHHHH-HHH--CCCCC----CCCCCEEEEEEC-----------CHHHHHHHHHHHHHCCEEEEEEC
Q ss_conf 6271022478999999998-764--17978----998972899958-----------97999999999997791898622
Q gi|254780486|r 280 KRKPALHKSLLQLINITDK-IAN--KKIGF----SSQSHIQSIVIG-----------DNKSCLNIAKNLQKKGFDIRAIR 341 (381)
Q Consensus 280 ~~~~~~~~~l~~~~~~~~~-~~~--~~~g~----~~~s~I~~v~~g-----------d~~~a~~~~~~L~~~Gi~v~~i~ 341 (381)
++++ +.++..++.+++.+ +.. ...++ .+..-+..|.+- +...+..+.+.++++|+++..
T Consensus 345 ~~~~-l~~~~~~~G~~l~~~L~~~~~~~p~v~~VRG~GL~~gvelv~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~-- 421 (461)
T PRK07482 345 EREN-LVGNAGEVGAYFRAQLRAAFGGHPLVGEVRGVGMLAAVEFVADRDDRTFFDPALKIGPQVSAAALERGVIARA-- 421 (461)
T ss_pred HHCC-HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCEEEE--
T ss_conf 3062-9999999999999999999854998788880675899999505654666674579999999999978988960--
Q ss_pred CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 88888887039996287899999999999999998873
Q gi|254780486|r 342 PPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 342 ~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
.|.+ ..|||+|+...|++|||+++++|+++++|.
T Consensus 422 ---~~~g-~vl~~~PPL~Is~~eid~~~~~l~~al~~v 455 (461)
T PRK07482 422 ---MPHG-DILGFAPPLVLTRAEADEIVAIAAKAVDEV 455 (461)
T ss_pred ---CCCC-CEEEEECCEECCHHHHHHHHHHHHHHHHHH
T ss_conf ---5999-989997994088999999999999999999
No 71
>PRK06062 hypothetical protein; Provisional
Probab=100.00 E-value=6.7e-33 Score=225.22 Aligned_cols=342 Identities=14% Similarity=0.163 Sum_probs=226.0
Q ss_pred HHHCCCEEEECCCCEEEECCCCC---CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CC
Q ss_conf 99759839992897689803446---56677988999999999986378688722443688589999999984012--88
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSHD---YLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF--GF 90 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~d---YLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~--g~ 90 (381)
.+++|.+.+..||++||||.|.- -||- +||+|.+++.+++++ ... . ++. + .++...++.++|++.. +.
T Consensus 23 ~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~Ai~~q~~~-~~~-~-~~~-~--~~~~~~~la~~l~~~~p~~~ 95 (434)
T PRK06062 23 AAAEGSYVWDYEGNRYLDFSSQLVNTNIGH-QHPKVVAAIQEQAAR-LCT-V-APA-H--ANDARSEAARLIAERAPGDL 95 (434)
T ss_pred EEEECCEEEECCCCEEEEECHHHHHHHHCC-CCHHHHHHHHHHHHH-CCC-C-CCC-C--CCHHHHHHHHHHHHHCCCCC
T ss_conf 981338899797899998606178676568-979999999999975-476-4-675-2--45999999999997477775
Q ss_pred CCEEEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHHHHHHHHCCCC-----------CE----EEC------C-CC
Q ss_conf 8516741660245655666---3168971004542026775266640876-----------40----305------6-88
Q gi|254780486|r 91 EKMLYFGSGYAANMAILST---LPQATDLIVYDKLVHASIREGINSGKAQ-----------AI----AIP------H-NN 145 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi~~g~~ls~a~-----------~~----~f~------H-nD 145 (381)
+.+++++||..||.+++.. ..++..+|-.+..-|....-+..+++.. .. +|. . ++
T Consensus 96 ~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 175 (434)
T PRK06062 96 SKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGTAINLTGDPRRWPNDTGNAGVVHFFGPFLYRSSFHATTE 175 (434)
T ss_pred CEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCH
T ss_conf 87998378438999999999985299837664046678865207840682014688888995341588766766778886
Q ss_pred -------HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE
Q ss_conf -------147899764310002478607971462157661346----899999863136089861311222347776401
Q gi|254780486|r 146 -------INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL 214 (381)
Q Consensus 146 -------~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~ 214 (381)
++.|++.+. ...+.....|++|.|-+..|.+.| |++++++|++||++||+||++ +| +|++|...
T Consensus 176 ~~~~~~~l~~l~~~i~---~~~~~~iAAvivEPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~-TG-~GRtG~~f 250 (434)
T PRK06062 176 EEECERALAHLERVIA---LEGPSTIAAIVLESVPGTAGIMVPPPGYLAGVRELCDRHGIVFIADEVM-AG-FGRTGKWF 250 (434)
T ss_pred HHHHHHHHHHHHHHHH---HCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCC-CC-CCCCCCCC
T ss_conf 8999999999999998---5199977999947867889986687678768999999859506746432-27-87666642
Q ss_pred -EEEHHCCCCCCCCCCCCCCCCCE---EEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH
Q ss_conf -10000134652100134656530---26752451001000012110000135775025789887898862710224789
Q gi|254780486|r 215 -THIIEERNNVIVMHSCSKALGSS---GALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLL 290 (381)
Q Consensus 215 -~~~~~~~~~~iv~~TlsKa~g~~---GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~ 290 (381)
++++++.||++ ||||++|+. -|.+++++++.+.+.....+.-+|-+.+|..|++++++|++++++. +.++.+
T Consensus 251 a~e~~gv~PDiv---~~gK~l~gG~~Plsav~~~~~i~~~~~~~~~~~g~T~~Gnpla~Aaa~a~L~~i~~~~-l~~~~~ 326 (434)
T PRK06062 251 AIEHFDVVPDLI---TFAKGVNSGYVPLGGVAISEAIADTFADRPYPGGLTYSGHPLACAAAVATINAMEEEG-IVENAA 326 (434)
T ss_pred CCCCCCCCCCHH---EEHHHHCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC-HHHHHH
T ss_conf 100589797621---0103314887761788745999987422675678788898799999999999997358-999999
Q ss_pred HHH-HH----HHHHHHCC--C-CCCCCCCEEEEEE--------------CCHHHHHHHHHHHHHCCEEEEEECCCCCCCC
Q ss_conf 999-99----99876417--9-7899897289995--------------8979999999999977918986228888888
Q gi|254780486|r 291 QLI-NI----TDKIANKK--I-GFSSQSHIQSIVI--------------GDNKSCLNIAKNLQKKGFDIRAIRPPTVPIN 348 (381)
Q Consensus 291 ~~~-~~----~~~~~~~~--~-g~~~~s~I~~v~~--------------gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~ 348 (381)
+.. ++ +.++..+. + .+.+..-...|.+ .....+..+...++++|+++.+ .+
T Consensus 327 ~~G~~~l~~~L~~l~~~~p~v~~VRG~GL~~gielv~~~~~~~~~~~~~~~~~~~~~v~~~~~~~Gll~~~-------~g 399 (434)
T PRK06062 327 RIGAEVLGPGLRELAERHPSVGEVRGLGVFWALELVADRETREPLVPYGAASAAMAAVVAACKERGLLPFV-------NG 399 (434)
T ss_pred HHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE-------CC
T ss_conf 99999999999999865898688861662699998226443555554433279999999999979927833-------59
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 703999628789999999999999999887387
Q gi|254780486|r 349 TARLRISITLNVDEPTIVKLFDILPQIISEGNS 381 (381)
Q Consensus 349 ~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~s 381 (381)
..|||.|+...|++|||+++++|++++++.+.
T Consensus 400 -n~irl~PpL~it~~eid~~l~~l~~al~~~~a 431 (434)
T PRK06062 400 -NRIHVVPPCTVTEDEVREGLAILDAALAVADA 431 (434)
T ss_pred -CEEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf -98999789238899999999999999998765
No 72
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=1.2e-32 Score=223.65 Aligned_cols=340 Identities=18% Similarity=0.272 Sum_probs=225.7
Q ss_pred HHCCCEEEECCCCEEEECCCCC---CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCC
Q ss_conf 9759839992897689803446---56677988999999999986378688722443688589999999984012--888
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSHD---YLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF--GFE 91 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~d---YLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~--g~e 91 (381)
+++|.+.++.||++||||.|.- =||- +||+|++|+.++++ +...+ +.+ .-.+....+|.++|+++. +.+
T Consensus 46 ~a~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~Q~~-~l~~~---~~~-~~~~~~~~~LAe~L~~~~p~~~~ 119 (462)
T PRK06916 46 RGEGRKLYDVNGNEYWDGVSSIWLNVHGH-RVPELDEAIREQLN-KIAHS---TML-GLANVPSILLAEKLIEVVPEGLK 119 (462)
T ss_pred EEECCEEEECCCCEEEECCCCHHHCCCCC-CCHHHHHHHHHHHH-HCCCC---CCC-CCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 73518899799999988463377403568-96999999999986-65685---677-76778899999999985775548
Q ss_pred CEEEECCCCHHHHHHHHHH---------CCCCCCCCHHHHCCHHHHHHHHHCCC--------------CCEEEC----C-
Q ss_conf 5167416602456556663---------16897100454202677526664087--------------640305----6-
Q gi|254780486|r 92 KMLYFGSGYAANMAILSTL---------PQATDLIVYDKLVHASIREGINSGKA--------------QAIAIP----H- 143 (381)
Q Consensus 92 ~al~~~sG~~An~~~i~~l---------~~~~d~ii~D~~~HaSi~~g~~ls~a--------------~~~~f~----H- 143 (381)
.+++.+||..||.+++..- .++..+|-.+..-|.+-.-++-+++. ...+|+ +
T Consensus 120 ~v~f~~SGseA~E~AiKlAr~y~~~~g~~~r~~ii~~~~syHG~T~ga~s~s~~~~~~~~~~~~~~~~~~~p~p~~~~~~ 199 (462)
T PRK06916 120 KVFYSDSGSSAVEIAIKMAFQYWQHKGKPKKQRFVTLKEAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSP 199 (462)
T ss_pred EEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCC
T ss_conf 79954974999999999999999982888763799836885877520010467411357777878884676899755676
Q ss_pred --CC--------HHHHHHHHHHHHHCCCCCCCEEEECCC-CCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCC
Q ss_conf --88--------147899764310002478607971462-157661346----899999863136089861311222347
Q gi|254780486|r 144 --NN--------INSFAENINKWRKSGGKGFPWIVVESI-YSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCG 208 (381)
Q Consensus 144 --nD--------~~~Le~~l~~~~~~~~~~~~~vv~egv-~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G 208 (381)
+| ++++++.+++ .++....|++|.+ -+-.|.+.| |++|++||++||++||+||++ +| +|
T Consensus 200 ~~~~~~~~~~~~~~~le~~i~~----~~~~iAaviiEP~iqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~-TG-fG 273 (462)
T PRK06916 200 YGNDKEEIVKKHLEEMEELLKE----KHEEIAAIIVEPLMQGAGGMITMPKGYLKGLRNLCTKYNVLFITDEVA-TG-FG 273 (462)
T ss_pred CCCCHHHHHHHHHHHHHHHHHH----CCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCC-CC-CC
T ss_conf 7898789999999999999975----799766999961445789965787899999999986059726725430-27-87
Q ss_pred CCCCE-EEEEHHCCCCCCCCCCCCCCCCCE---EEEEECCCCCCCCCCC---CCCCEE--CCCCCCCCHHHHHHHHHHHH
Q ss_conf 77640-110000134652100134656530---2675245100100001---211000--01357750257898878988
Q gi|254780486|r 209 PLGKG-LTHIIEERNNVIVMHSCSKALGSS---GALVGSNKIIYDYLIN---YAKPFI--YTTSPSPILAVVACEALKLI 279 (381)
Q Consensus 209 ~~G~G-~~~~~~~~~~~iv~~TlsKa~g~~---GG~i~~~~~ii~~l~~---~~~~~i--fst~l~P~~~aaa~aal~~l 279 (381)
|+|+. ..+++++.||++ ||+|++|+. -|.+++++++.+.+.. ...++. +|-+.+|..|++++++|+++
T Consensus 274 RtG~~fa~e~~gv~PDiv---~~gKgl~gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~GnPla~Aaa~a~L~~i 350 (462)
T PRK06916 274 RTGKMFACEHENVTPDIL---TAGKGLTGGYLPIAITVTTDEIYNAFLGDYEEQKTFFHGHSYTGNPLGCAVAIANLELY 350 (462)
T ss_pred CCCCCCHHHCCCCCCCHH---HHCHHCCCCCCCEEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 556711664279668834---31211037877627997618988753166545666556777888879999999999999
Q ss_pred HHCCCHHHHHHHHHHHHHH-HHH-CCCC----CCCCCCEEEEEEC-----------CHHHHHHHHHHHHHCCEEEEEECC
Q ss_conf 6271022478999999998-764-1797----8998972899958-----------979999999999977918986228
Q gi|254780486|r 280 KRKPALHKSLLQLINITDK-IAN-KKIG----FSSQSHIQSIVIG-----------DNKSCLNIAKNLQKKGFDIRAIRP 342 (381)
Q Consensus 280 ~~~~~~~~~l~~~~~~~~~-~~~-~~~g----~~~~s~I~~v~~g-----------d~~~a~~~~~~L~~~Gi~v~~i~~ 342 (381)
+++. +.++.++..+++.+ +.. .... +.+..-+..|.+- +...+..++.+++++|+++.+.
T Consensus 351 ~~e~-l~~~v~~~g~~l~~~L~~l~~~~~v~dVRG~Gl~~gielv~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~-- 427 (462)
T PRK06916 351 EKTN-LIEQVARKTEYVATQLEDLFALKHVGDIRQLGLMVGIELVKNKETKEPFPWTERVGVQVCKRSRELGMILRPL-- 427 (462)
T ss_pred HHCC-HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEC--
T ss_conf 9668-8999999999999999986269985877247718999983266546778557899999999999699499744--
Q ss_pred CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 88888870399962878999999999999999988738
Q gi|254780486|r 343 PTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 343 PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
| ..|||.|+..+|++||++++++|+++++|..
T Consensus 428 -----g-n~i~~~PPL~it~~eid~~~~il~~al~ev~ 459 (462)
T PRK06916 428 -----G-NTIVFMPPLASTIDELDEMLRILYKAISDVT 459 (462)
T ss_pred -----C-CEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf -----9-9999989934889999999999999999997
No 73
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=5.4e-33 Score=225.82 Aligned_cols=341 Identities=15% Similarity=0.158 Sum_probs=221.6
Q ss_pred HHCCCEEEECCCCEEEECCCCCC---CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC----
Q ss_conf 97598399928976898034465---66779889999999999863786887224436885899999999840128----
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSHDY---LALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG---- 89 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~dY---LGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g---- 89 (381)
+++|.|.++.+|++||||.|.-. ||- +||+|++|+.+++++...+++ . .-+++...++-++|++.+.
T Consensus 51 ra~G~~l~D~dG~~yLD~~sg~~~~~lGh-~~p~i~~Ai~~ql~~~~~~~~---~--~~~~~~~~~la~~L~~~~p~~~~ 124 (464)
T PRK06938 51 RARGIYVEDVEGRQFIDCLAGAGTLALGH-NHPVVIEAIQQVLADELPLHT---L--DLTTPVKDQFVQDLFGSLPEAFA 124 (464)
T ss_pred EEECCEEEECCCCEEEEECHHHHHHHHCC-CCHHHHHHHHHHHHHCCCEEE---C--CCCCHHHHHHHHHHHHHCCHHHH
T ss_conf 83648899798899999164088656707-959999999999860898126---7--85868999999999996205553
Q ss_pred -CCCEEEEC-CCCHHHHHHHHHH---CCCCCCCCHHHHCCHHHHHHHHHCC--------------CCCEEECCC------
Q ss_conf -88516741-6602456556663---1689710045420267752666408--------------764030568------
Q gi|254780486|r 90 -FEKMLYFG-SGYAANMAILSTL---PQATDLIVYDKLVHASIREGINSGK--------------AQAIAIPHN------ 144 (381)
Q Consensus 90 -~e~al~~~-sG~~An~~~i~~l---~~~~d~ii~D~~~HaSi~~g~~ls~--------------a~~~~f~Hn------ 144 (381)
.....+|+ ||..||.+++..- .++..+|-.+..-|.+-.-..-+++ ....+|++.
T Consensus 125 ~~~~v~f~~~SGSEAvE~AiKlAR~~tgr~~Iis~~~~YHG~T~gals~tg~~~~~~~~~~~~~~~~~~p~p~~~r~p~~ 204 (464)
T PRK06938 125 KEAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFG 204 (464)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCC
T ss_conf 04408984798089999999998646798859998347889706556541787555567888999678168864467667
Q ss_pred ---------CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCC
Q ss_conf ---------8147899764310002478607971462157661346----899999863136089861311222347776
Q gi|254780486|r 145 ---------NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLG 211 (381)
Q Consensus 145 ---------D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G 211 (381)
+.+.+|+.+.... ...+....|++|.|.+..|.+.| +++++++|++||++||+||++ +| +|++|
T Consensus 205 ~~~~~~~~~~~~~le~~i~~~~-~g~~~iAAvi~EpIqg~gGvi~~p~~yl~~lr~lc~~~giLlI~DEVq-tG-fGRTG 281 (464)
T PRK06938 205 LGGEAGVRANLHYLENLLDDPE-SGVQLPAAVILEVVQGEGGVIPADDEWLRGLRRITEEAGIPLIVDEIQ-SG-FGRTG 281 (464)
T ss_pred CCHHHHHHHHHHHHHHHHHHHH-CCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCC-CC-CCCCC
T ss_conf 7615678888999999974054-068824899988856877986499899999999986679159864201-26-77436
Q ss_pred CEE-EEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHH
Q ss_conf 401-100001346521001346565302---6752451001000012110000135775025789887898862710224
Q gi|254780486|r 212 KGL-THIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHK 287 (381)
Q Consensus 212 ~G~-~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~ 287 (381)
+.. .+++++.||++ ||+|++|+ | |.+++++++ +..... .+.+|-+.+|..|++++++|++++++. +.+
T Consensus 282 ~~fa~e~~gv~PDii---t~gKglgG-g~Plsavi~~~~i-~~~~~g--~h~~T~~gnpla~AaalavL~iie~e~-l~~ 353 (464)
T PRK06938 282 KMFAFEHAGIIPDVV---VLSKAIGG-SLPLAVVVYREWL-DTWQPG--AHAGTFRGNQMAMAAGSATLRYIKEHR-LAE 353 (464)
T ss_pred CCHHHHHCCCCCCEE---EECHHCCC-CCCEEEEEECHHH-HHCCCC--CCCCCCCCCHHHHHHHHHHHHHHHHCC-HHH
T ss_conf 840643236888879---86300048-7734999982776-504788--748728999899999999999998644-999
Q ss_pred HHHHHHHHHH-HHHHC--CCC----CCCCCCEEEEEEC--------------CHHHHHHHHHHHHHCCEEEEEECCCCCC
Q ss_conf 7899999999-87641--797----8998972899958--------------9799999999999779189862288888
Q gi|254780486|r 288 SLLQLINITD-KIANK--KIG----FSSQSHIQSIVIG--------------DNKSCLNIAKNLQKKGFDIRAIRPPTVP 346 (381)
Q Consensus 288 ~l~~~~~~~~-~~~~~--~~g----~~~~s~I~~v~~g--------------d~~~a~~~~~~L~~~Gi~v~~i~~PtVp 346 (381)
+.++...++. ++... ..+ +.+..-+..|.+- +...+..+..+++++|+++.+-.
T Consensus 354 ~a~~~G~~l~~~L~~l~~~~p~V~dVRG~GLm~giElv~~~~~~d~~~~~p~~~~~~~~v~~~~l~~Gll~~~~g----- 428 (464)
T PRK06938 354 HAAAMGERLLEHLRQLQRDYPQLGDVRGRGLMLGVEIVDPQGEPDALGHPPANGELASRIQRECLRRGLILELGG----- 428 (464)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC-----
T ss_conf 999999999999999985399879764160699999841666644333565558999999999997892896468-----
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 887039996287899999999999999998873
Q gi|254780486|r 347 INTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 347 ~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
.....|||.|+...|++|||+++++|+++++|-
T Consensus 429 ~~g~virl~PPL~it~eeid~~~~~l~~al~~a 461 (464)
T PRK06938 429 RHGSVVRFLPPLIITAEQIDEVAEIFAEAVYAA 461 (464)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 899989997991288999999999999999998
No 74
>PRK07323 consensus
Probab=100.00 E-value=6.5e-33 Score=225.31 Aligned_cols=337 Identities=16% Similarity=0.184 Sum_probs=226.6
Q ss_pred HHCCCEEEECCCCEEEECCCCCC---CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC----
Q ss_conf 97598399928976898034465---66779889999999999863786887224436885899999999840128----
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSHDY---LALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG---- 89 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~dY---LGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g---- 89 (381)
+++|.|.++.||++||||.|.-. ||- +||+|.+|+.+++++ .. ..+.+.+ .++...+|-++|++.+.
T Consensus 46 r~~G~~l~D~dG~~ylD~~sg~~~~~lGh-~~p~i~~Ai~~q~~~-l~-~~~~~~~---~~~~~~~lae~L~~~~~~~~~ 119 (443)
T PRK07323 46 RGEGCMLEDVDGNVFLDFTAGIAVTTTGH-AHPHVVRAVQEQAER-FA-HVCGTDF---YYEPTTSLAERLVGHAPFPGE 119 (443)
T ss_pred EEECCEEEECCCCEEEECCCCHHHCEECC-CCHHHHHHHHHHHHH-CC-CCCCCCC---CCHHHHHHHHHHHHHCCCCCC
T ss_conf 73409899698899999250877443168-989999999999975-55-6554655---778999999999984789766
Q ss_pred CCCEEEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHHHHHHHHCCC---------------CCEEECC--------
Q ss_conf 88516741660245655666---316897100454202677526664087---------------6403056--------
Q gi|254780486|r 90 FEKMLYFGSGYAANMAILST---LPQATDLIVYDKLVHASIREGINSGKA---------------QAIAIPH-------- 143 (381)
Q Consensus 90 ~e~al~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi~~g~~ls~a---------------~~~~f~H-------- 143 (381)
...+++++||..||.+++.. ..++..+|-.+..-|.+-.-++.+++. ..++|++
T Consensus 120 ~~rv~f~~SGsEAvE~AiklAr~~tgr~~iis~~~~yHG~T~ga~s~tg~~~~~~~~~~p~~~~~~~~p~p~~~~~~~~~ 199 (443)
T PRK07323 120 KWRVFFGNSGAESVEAAIKLARYHTGRSHIIAFLGAFHGRTYGAMSLTGSKTVYRQGFGPLLPGVSHIPYPNPFRPPLGS 199 (443)
T ss_pred CCEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
T ss_conf 56899837746899999999998469987999707878987642431288300013568889990670687632343468
Q ss_pred -------CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCC
Q ss_conf -------88147899764310002478607971462157661346----8999998631360898613112223477764
Q gi|254780486|r 144 -------NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGK 212 (381)
Q Consensus 144 -------nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~ 212 (381)
..++.|++.++... .++....+++|.|.+..|.+.| ++++++||++||++||+||++ +| +|++|.
T Consensus 200 ~~~~~~~~~~~~le~~~~~~~--~~~~iAAvi~EPiqg~gG~~~pp~~yl~~lr~lc~~~~illI~DEV~-tG-fGRtG~ 275 (443)
T PRK07323 200 TPEECGHAVLDHLESLFQTVL--PAEEVAAIVVEPIQGEGGYIVPPDGFLPRLRAICDRHGILLVVDEVQ-AG-MGRTGR 275 (443)
T ss_pred CHHHHHHHHHHHHHHHHHHHC--CCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCC-CC-CCCCCC
T ss_conf 726789999999999998517--89978999986877888985699899999999999849758867423-27-886664
Q ss_pred EE-EEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHH
Q ss_conf 01-100001346521001346565302---67524510010000121100001357750257898878988627102247
Q gi|254780486|r 213 GL-THIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKS 288 (381)
Q Consensus 213 G~-~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~ 288 (381)
.. ++++++.||++ |++|++|+ | |.+++++++.++.. ...+ .|-+.+|..|++++++|+++++ .+.++
T Consensus 276 ~fa~e~~gv~PDiv---~~gKglg~-G~Plsav~~~~~i~~~~~-g~h~--~T~~gnpl~~aaa~a~L~iie~--~l~~~ 346 (443)
T PRK07323 276 LFAIEHWGVQPDII---TLAKGIAS-GMPLGAILAREELMTWPP-GSHG--TTFGGNPVAAAAAHATLDLLEG--GLMEN 346 (443)
T ss_pred CCHHHCCCCCCCEE---EECHHHCC-CCCEEEEEECHHHHCCCC-CCCC--CCCCCCHHHHHHHHHHHHHHHH--HHHHH
T ss_conf 30201469788889---87134328-873189998578613656-7765--3658974899999999999987--79999
Q ss_pred HHHHHHHHHH-HHHC--CCC----CCCCCCEEEEEE------CCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEE
Q ss_conf 8999999998-7641--797----899897289995------89799999999999779189862288888887039996
Q gi|254780486|r 289 LLQLINITDK-IANK--KIG----FSSQSHIQSIVI------GDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRIS 355 (381)
Q Consensus 289 l~~~~~~~~~-~~~~--~~g----~~~~s~I~~v~~------gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~ 355 (381)
..+...++.+ +... ..+ +.+..-+..+.+ .++..+.++.+.++++|+++.+. |...|||.
T Consensus 347 v~~~g~~l~~~L~~l~~~~p~v~~vRG~GL~~giel~~~~~~~~~~~~~~i~~~~~~~Gll~~~~-------g~~~ir~~ 419 (443)
T PRK07323 347 AARMGEFLLAELRQLQDRFPFLGDVRGRGLMIGLDFVDPDGNPDGDLRDRAVRLAFEKGLLLLGC-------GKAAIRIC 419 (443)
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEC-------CCCEEEEE
T ss_conf 99999999999999886099799873156399999954888848899999999999799799836-------99989997
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 287899999999999999998873
Q gi|254780486|r 356 ITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 356 v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
|+...|++|||+++++|+++++|+
T Consensus 420 PPL~is~~eid~~l~~l~~al~el 443 (443)
T PRK07323 420 PPLVLTREEAATGLDILREVFREL 443 (443)
T ss_pred CCEECCHHHHHHHHHHHHHHHHHC
T ss_conf 891088999999999999999849
No 75
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=100.00 E-value=1.5e-32 Score=222.98 Aligned_cols=339 Identities=18% Similarity=0.249 Sum_probs=224.9
Q ss_pred HHCCCEEEECCCCEEEECCCCCC---CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--CC
Q ss_conf 97598399928976898034465---66779889999999999863786887224436885899999999840128--88
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSHDY---LALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG--FE 91 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~dY---LGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g--~e 91 (381)
+++|.|.++.||++||||.|.-. ||- +||+|.+|+.+++++ . .+++.+.+ .++...+|-++|+++.. ..
T Consensus 43 ra~G~~l~D~dG~~yLD~~~g~~~~~lGh-~~p~v~~Ai~~Q~~~-l-~~~~~~~~---~~~~~~~lae~L~~~~p~~~~ 116 (454)
T PRK06918 43 SANGALVTDVDGNQYIDFAGAIGTINVGH-CHPKVKEALHKQVDQ-Y-IHTGFNVM---MYEPYIELAEKLAALAPGSFD 116 (454)
T ss_pred EEECCEEEECCCCEEEEECCCHHHHHHCC-CCHHHHHHHHHHHHH-C-CCCCCCCC---CCHHHHHHHHHHHHHCCCCCC
T ss_conf 70619899799799999150698655268-979999999999864-6-67677755---476999999999984774547
Q ss_pred -CEEEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHHHHHHHHCCC---------------CCEEECC-----CC--
Q ss_conf -516741660245655666---316897100454202677526664087---------------6403056-----88--
Q gi|254780486|r 92 -KMLYFGSGYAANMAILST---LPQATDLIVYDKLVHASIREGINSGKA---------------QAIAIPH-----NN-- 145 (381)
Q Consensus 92 -~al~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi~~g~~ls~a---------------~~~~f~H-----nD-- 145 (381)
.+++++||..||.+++.. ..++..+|-.+.--|.+-.-.+.+++. ...+|++ .+
T Consensus 117 ~~v~f~~SGsEAvE~AlKlAr~~t~r~~ii~~~~~yHG~T~~a~s~t~~~~~~~~~~~p~~p~~~~~p~p~~~~~~~~~~ 196 (454)
T PRK06918 117 KQVLFLNSGAEAVENAVKIARKYTKRQGIIAFSKGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLT 196 (454)
T ss_pred CEEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
T ss_conf 46998278517999999999987288756763387178624456530798542246788899836657864235778997
Q ss_pred --------HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCE
Q ss_conf --------147899764310002478607971462157661346----89999986313608986131122234777640
Q gi|254780486|r 146 --------INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKG 213 (381)
Q Consensus 146 --------~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G 213 (381)
++.+++.+.. ...+.....|++|.|.+-.|.+.| |+++++||++||++||+||++ +| +|++|..
T Consensus 197 ~~~~~~~~~~~~~~~~~~--~~~~~~iAAvi~EPiqg~gG~~~p~~~yl~~lr~lc~~~gillI~DEV~-tG-fGRtG~~ 272 (454)
T PRK06918 197 EEQYDDFIIEEFKNFFIS--EVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQ-TG-FSRTGKY 272 (454)
T ss_pred HHHHHHHHHHHHHHHHHH--HCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECC-CC-CCCCCCC
T ss_conf 667789999999999986--2488866899996887888986689899999999885649168720112-48-7613574
Q ss_pred -EEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEEC-CCCCCCCHHHHHHHHHHHHHHCCCHHHH
Q ss_conf -1100001346521001346565302---6752451001000012110000-1357750257898878988627102247
Q gi|254780486|r 214 -LTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIY-TTSPSPILAVVACEALKLIKRKPALHKS 288 (381)
Q Consensus 214 -~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~if-st~l~P~~~aaa~aal~~l~~~~~~~~~ 288 (381)
..+++++.||++ ||+|++|+ | |.+++++++.+... ++..+ |-+.+|..|++++++|+++++++ +.++
T Consensus 273 fa~e~~gv~PDiv---~~gK~lg~-G~Plsav~~~~~i~~~~~---~~~~~~Tf~gnpla~aaa~a~L~~i~~e~-l~~~ 344 (454)
T PRK06918 273 FAIDHYDVVPDLI---TVSKSLGA-GVPISGVIGRKEIMNEAA---PGELGGTYAGSPLGCAAALAVLDIIEKEN-LNDR 344 (454)
T ss_pred CHHHCCCCCCEEE---EECCHHHC-CCCCCCEEECHHHHHCCC---CCCCCCCCCCCHHHHHHHHHHHHHHHHCC-HHHH
T ss_conf 0222279898599---97726558-998722652188760468---86715617989899999999999998668-9999
Q ss_pred HHHHHHHHH-HHHH--CCCC----CCCCCCEEEEEE--------CCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEE
Q ss_conf 899999999-8764--1797----899897289995--------897999999999997791898622888888870399
Q gi|254780486|r 289 LLQLINITD-KIAN--KKIG----FSSQSHIQSIVI--------GDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLR 353 (381)
Q Consensus 289 l~~~~~~~~-~~~~--~~~g----~~~~s~I~~v~~--------gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlR 353 (381)
..+..+++. ++.. ...+ +.+...+..|.+ +|...+..+..+++++|+++.+.. .....||
T Consensus 345 ~~~~G~~l~~~L~~l~~~~p~v~~vRG~Gl~~gvelv~d~~~~~p~~~~~~~i~~~~~~~Gll~~~~g-----~~~~vlr 419 (454)
T PRK06918 345 AIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELVQDRKTKEPDKTLTANLCAEANKRGLLLLSAG-----TYGNVIR 419 (454)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEECC-----CCCCEEE
T ss_conf 99999999999999986299868882264799999950676689779999999999996895998468-----8999899
Q ss_pred EECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9628789999999999999999887
Q gi|254780486|r 354 ISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 354 i~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
|.++..+|++|||+++++|++++++
T Consensus 420 ~~PPL~it~~eid~~l~~l~~al~a 444 (454)
T PRK06918 420 VLMPLVITDEQLEEGLTIIEESLQA 444 (454)
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 9788228999999999999999999
No 76
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=100.00 E-value=6.9e-33 Score=225.13 Aligned_cols=344 Identities=20% Similarity=0.256 Sum_probs=224.7
Q ss_pred HHCCCEEEECCCCEEEECCCCC-CCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC----CC
Q ss_conf 9759839992897689803446-56677-988999999999986378688722443688589999999984012----88
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSHD-YLALS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF----GF 90 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~d-YLGl~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~----g~ 90 (381)
+++|.+.+..+|++||||.|.- -+.|. +||+|.+|+.++++ +.++.. ++.+ .+....++-+++++.. +.
T Consensus 27 ra~G~~l~D~dG~~ylD~~sg~~~~~lGH~~p~I~~Ai~~ql~-~~~~~h-~~~~---~~~~~~~l~e~l~~~il~p~~l 101 (426)
T PRK09264 27 KAKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQ-RDGITH-GLDM---HTEAKREFLETFERLILKPRGL 101 (426)
T ss_pred EEECCEEEECCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHH-HCCCCC-CCCC---CCHHHHHHHHHHHHHHCCCCCC
T ss_conf 8453989989989999837059853005897999999999998-548600-1342---1289999999999973575579
Q ss_pred C-CEEEEC-CCCHHHHHHHHH---HCCCCCCCCHHHHCCHHHHHHHHHCC--------------CCCEEEC------CCC
Q ss_conf 8-516741-660245655666---31689710045420267752666408--------------7640305------688
Q gi|254780486|r 91 E-KMLYFG-SGYAANMAILST---LPQATDLIVYDKLVHASIREGINSGK--------------AQAIAIP------HNN 145 (381)
Q Consensus 91 e-~al~~~-sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi~~g~~ls~--------------a~~~~f~------HnD 145 (381)
+ ..++++ ||..||.+++.. ..++..+|-.+..-|.+-.-+.-+++ ....+|+ .++
T Consensus 102 ~~~v~F~~~SGSEAvE~AiKlAR~~tgr~~Iis~~~~YHG~T~gals~tg~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~ 181 (426)
T PRK09264 102 DYKVQFTGPTGTNAVEAALKLARKVTGRTNIISFTNGFHGMTLGALAVTGNAHKRGGAGVPLNHVTFMPYDGYFGGDVDT 181 (426)
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCCCCHHH
T ss_conf 80489558982279999999999834998599983775787414555037843457788997881772788866787016
Q ss_pred HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCE-EEEEHHC
Q ss_conf 147899764310002478607971462157661346----89999986313608986131122234777640-1100001
Q gi|254780486|r 146 INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKG-LTHIIEE 220 (381)
Q Consensus 146 ~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G-~~~~~~~ 220 (381)
.+.+++.++.... ..+....|++|.|-+..|.+.| |++++++|++||++||+||++ +| +|+||+. .++++++
T Consensus 182 ~~~~e~~l~~~~~-g~d~iAAviiEPiqg~gG~~~~p~~yl~~lr~lc~~~giLlI~DEV~-tG-fGRTG~~fa~e~~gv 258 (426)
T PRK09264 182 LAYLEKLLEDSSS-GVDLPAAVIVETVQGEGGLNVASAEWLQRLEKLCRKHDILLIVDDIQ-AG-CGRTGTFFSFEEAGI 258 (426)
T ss_pred HHHHHHHHHHHCC-CCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEECC-CC-CCCCCCCCCCCCCCC
T ss_conf 9999999876237-88861699987866888982499899999999998707506733201-07-786778302104799
Q ss_pred CCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Q ss_conf 346521001346565302---67524510010000121100001357750257898878988627102247899999999
Q gi|254780486|r 221 RNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITD 297 (381)
Q Consensus 221 ~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~ 297 (381)
.|+++ ||+|++++.| |.+++++++ +... . ..+..|-+.+|+.|+++.++|+++.+++.+.++.++...++.
T Consensus 259 ~PDiv---~~gKglsGgg~P~sav~~~~e~-d~~~-~-g~h~~Tf~Gnp~a~aaa~a~L~~~~~~~~l~~~v~~~g~~l~ 332 (426)
T PRK09264 259 KPDIV---TLSKSISGYGLPMALVLIKPEL-DQWK-P-GEHNGTFRGNNLAFVTATAALETYWSDDAFEKEVKRKGELVR 332 (426)
T ss_pred CCCEE---EECHHHCCCCCCEEEEEECHHH-CCCC-C-CCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_conf 98779---8864336897104999973444-0467-7-544667788829999999999999871479999999999999
Q ss_pred ----HHHHCCCC----CCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf ----87641797----8998972899958979999999999977918986228888888703999628789999999999
Q gi|254780486|r 298 ----KIANKKIG----FSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLF 369 (381)
Q Consensus 298 ----~~~~~~~g----~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~ 369 (381)
++..+..+ +.+..-+..|.+.++..+.++.+.++++|+++....+ +...|||.|+..+|++|||.++
T Consensus 333 ~~L~~l~~~~~~~v~dvRG~Glm~giel~~~~~~~~i~~~~~~~Gll~~~~g~-----~~~vir~~PPL~it~~eid~~~ 407 (426)
T PRK09264 333 ERLEEIAAEYPGLGLSVRGRGMMQGIDFGDGELAGKICRRAFENGLIIETSGP-----NDEVVKLLPPLTIDEEELEEGL 407 (426)
T ss_pred HHHHHHHHHCCCCEEEEEEEEEEEEEEECCHHHHHHHHHHHHHCCCEEEECCC-----CCCEEEEECCEECCHHHHHHHH
T ss_conf 99999997689962788860289999937768899999999978988964489-----9988999799208899999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999998873
Q gi|254780486|r 370 DILPQIISEG 379 (381)
Q Consensus 370 ~~l~~v~~E~ 379 (381)
++|+++++|.
T Consensus 408 ~~l~~al~~v 417 (426)
T PRK09264 408 DILEEAVAEV 417 (426)
T ss_pred HHHHHHHHHH
T ss_conf 9999999999
No 77
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=100.00 E-value=6.1e-33 Score=225.48 Aligned_cols=344 Identities=19% Similarity=0.226 Sum_probs=227.3
Q ss_pred HHHHHHCCCEEEECCCCEEEECCCCC---CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 99999759839992897689803446---566779889999999999863786887224436885899999999840128
Q gi|254780486|r 13 LQKIKSKGRHRQLLRRQDIWDFTSHD---YLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG 89 (381)
Q Consensus 13 l~~~~~~g~~~~~~~~~~~l~f~s~d---YLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g 89 (381)
..-.+++|.|.++.||++||||.|.- -||- +||+|++|+.++++ +....+ .+.. .++...+|-++|.++..
T Consensus 29 ~~i~~g~G~~l~D~dG~~ylD~~~g~~~~~lGh-~hp~i~~Ai~~q~~-~l~~~~---~~~~-~~~~~~~lae~L~~~~p 102 (441)
T PRK13360 29 RLLVAAKGMYYTSHDGRRVLDGTAGLWCVNAGH-GRDEIVEAVRAQAG-ELDYAP---TFQM-GHPKAFELATRIAEIAP 102 (441)
T ss_pred CEEEEEECCEEEECCCCEEEECCCCHHHHCCCC-CCHHHHHHHHHHHH-HCCCCC---CCCC-CCHHHHHHHHHHHHHCC
T ss_conf 648986538899699999999653388640077-97999999999986-558734---6767-87799999999998578
Q ss_pred --CCCEEEECCCCHHHHHHHHHHC---------CCCCCCCHHHHCCHHHHHHHHHCC--------------CCCEEECCC
Q ss_conf --8851674166024565566631---------689710045420267752666408--------------764030568
Q gi|254780486|r 90 --FEKMLYFGSGYAANMAILSTLP---------QATDLIVYDKLVHASIREGINSGK--------------AQAIAIPHN 144 (381)
Q Consensus 90 --~e~al~~~sG~~An~~~i~~l~---------~~~d~ii~D~~~HaSi~~g~~ls~--------------a~~~~f~Hn 144 (381)
.+.+++.+||..||.+++..-- ++..+|-.+..-|.+-.-+.-+++ ....++.++
T Consensus 103 ~~l~~v~f~~SGsEA~E~AiKlAr~y~~~~g~~~r~~ii~~~~syHG~t~ga~s~sg~~~~~~~~~~~~~~~~~~p~~~~ 182 (441)
T PRK13360 103 GGLNHVFFTNSGSESVDTALKIALAYHRARGQGQRTRLIGRERGYHGVGFGGISVGGIAPNRKAFGALLPGVDHLPHTLD 182 (441)
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCC
T ss_conf 88687998487899999999999999886099872289932786279884655355887544567788998513588764
Q ss_pred C----------------HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCC
Q ss_conf 8----------------147899764310002478607971462157661346----89999986313608986131122
Q gi|254780486|r 145 N----------------INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHAT 204 (381)
Q Consensus 145 D----------------~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~ 204 (381)
. .++||+.+.... +.....|++|.|.+..|.+.| ++++++||++||++||+||++ +
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~le~~~~~~~---~~~iAAii~EPiqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~-t 258 (441)
T PRK13360 183 LARNAFSKGQPEHGAELADELERLVTLHD---ASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDKHGILLIFDEVI-T 258 (441)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHCC---CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCC-C
T ss_conf 22243345752567999999999998549---8857999977766778952389999999999986359557720131-2
Q ss_pred CCCCCCCCEE-EEEHHCCCCCCCCCCCCCCCCCE---EEEEECCCCCCCCCCCC---CCCEEC--CCCCCCCHHHHHHHH
Q ss_conf 2347776401-10000134652100134656530---26752451001000012---110000--135775025789887
Q gi|254780486|r 205 GVCGPLGKGL-THIIEERNNVIVMHSCSKALGSS---GALVGSNKIIYDYLINY---AKPFIY--TTSPSPILAVVACEA 275 (381)
Q Consensus 205 Gv~G~~G~G~-~~~~~~~~~~iv~~TlsKa~g~~---GG~i~~~~~ii~~l~~~---~~~~if--st~l~P~~~aaa~aa 275 (381)
| +|++|... .+++++.||++ |+||++++. -|.+++++++.+.+... ...|.+ |-+.+|..|++++++
T Consensus 259 G-~GRTG~~fa~e~~gv~PDiv---~~gKgl~gG~~Plsav~~~~~i~~~~~~~~~~~~~~~hg~T~~Gnplacaaa~a~ 334 (441)
T PRK13360 259 G-FGRLGAPFAAQYFGVTPDLL---TCAKGLTNGAIPMGAVFVSSEIHDAFMQGPEAGIEFFHGYTYSGHPLACAAALAT 334 (441)
T ss_pred C-CCCCCCCCEECCCCCCCCEE---EECCHHHCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 6-86235671001689878789---9772321787343225524999974336975554211367778898999999999
Q ss_pred HHHHHHCCCHHHHHHHHHHHHHHHHHC--CC----CCCCCCCEEEEEEC----C-HHHHHHHHHHHHHCCEEEEEECCCC
Q ss_conf 898862710224789999999987641--79----78998972899958----9-7999999999997791898622888
Q gi|254780486|r 276 LKLIKRKPALHKSLLQLINITDKIANK--KI----GFSSQSHIQSIVIG----D-NKSCLNIAKNLQKKGFDIRAIRPPT 344 (381)
Q Consensus 276 l~~l~~~~~~~~~l~~~~~~~~~~~~~--~~----g~~~~s~I~~v~~g----d-~~~a~~~~~~L~~~Gi~v~~i~~Pt 344 (381)
|+++++++ +.++.++..+++.+.... .. .+.+..-+..|.+. . ...+.++..+++++|+++.+.
T Consensus 335 L~~i~~e~-l~~~~~~~g~~l~~~L~~l~~~~~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~Gll~~~~---- 409 (441)
T PRK13360 335 LDLYEREG-LLTRAARLAPYWEDALHSLRDAPHVIDIRNLGLVGGIELAPRDGKPGKRAYEVFLKCFEKGLMIRYT---- 409 (441)
T ss_pred HHHHHHCC-HHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEECC----
T ss_conf 99999748-8999999999999999986249986885155489999997888865489999999999699499317----
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 88887039996287899999999999999998873
Q gi|254780486|r 345 VPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 345 Vp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
| ..|||+|+...|++|||+++++|+++++|.
T Consensus 410 ---g-n~irl~PPL~it~~eid~~~~~l~~aL~e~ 440 (441)
T PRK13360 410 ---G-DILALSPPLIIEEAQIDELFDIVAQALKET 440 (441)
T ss_pred ---C-CEEEEECCEECCHHHHHHHHHHHHHHHHHH
T ss_conf ---9-989998992088999999999999999956
No 78
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=1.2e-32 Score=223.69 Aligned_cols=341 Identities=14% Similarity=0.208 Sum_probs=224.3
Q ss_pred HHCCCEEEECCCCEEEECCCCCCCCCCC-CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC--CCE
Q ss_conf 9759839992897689803446566779-8899999999998637868872244368858999999998401288--851
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSHDYLALSS-STLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF--EKM 93 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~dYLGl~~-~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~--e~a 93 (381)
+++|.|.+..+|++||||+++.-..|.+ ||+|++|+.++++ +..+. ++.+ .++...+|.++|+++.+. ..+
T Consensus 61 raeG~yl~D~dG~~YLD~~G~~v~~lGh~hp~v~~Ai~~Q~~-~l~~~---~~~~--~~~~~~~lA~~L~~~~p~~l~~v 134 (460)
T PRK06082 61 AAEGIYIQDASGKKYMDFHGNNVHQLGYGHPHVIKKVTEQIA-KLPFS---PRRF--TNETAIECAEKLTEICGGELNRV 134 (460)
T ss_pred ECCCCEEEECCCCEEEEECCHHHCCCCCCCHHHHHHHHHHHH-HCCCC---CCCC--CCHHHHHHHHHHHHHCCCCCCEE
T ss_conf 052698997988999983478768567799999999999997-58887---6552--68899999999998578776979
Q ss_pred EEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHHHHHHHHCC--------------CCCEE----EC----CCCHHH
Q ss_conf 6741660245655666---31689710045420267752666408--------------76403----05----688147
Q gi|254780486|r 94 LYFGSGYAANMAILST---LPQATDLIVYDKLVHASIREGINSGK--------------AQAIA----IP----HNNINS 148 (381)
Q Consensus 94 l~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi~~g~~ls~--------------a~~~~----f~----HnD~~~ 148 (381)
++.+||..||.+++.. ..++..+|-.+..-|..-..++-+++ ...++ |+ -+|..+
T Consensus 135 ~f~~SGSEAvE~AiKlAr~~tgr~kiIs~~~syHG~T~~als~~g~~~~r~~~~pl~~g~~~vp~p~~~~~~~~~~~~~~ 214 (460)
T PRK06082 135 LFAPGGTSVIGMALKLARHITGNYKVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPRADGSD 214 (460)
T ss_pred EECCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCCCCHHHCCCCCCCCCCCEECCCCCCCCCCCCCCCHHH
T ss_conf 84396589999999999885288648996078677626665504954333688898999754798632366667643112
Q ss_pred H--HHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH---HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-EEEHHCCC
Q ss_conf 8--99764310002478607971462157661346---899999863136089861311222347776401-10000134
Q gi|254780486|r 149 F--AENINKWRKSGGKGFPWIVVESIYSMDGDKAP---LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL-THIIEERN 222 (381)
Q Consensus 149 L--e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap---L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~-~~~~~~~~ 222 (381)
+ .+.++......+ ....|++|.|-+..+.++| |++++++|++||++||+||++ +| +|++|+.. ++++++.|
T Consensus 215 ~~~~~~le~~ie~~g-~iAA~i~EPi~~~g~~~P~~~yl~~lr~lc~~~giLlI~DEVq-tG-fGRTG~~fa~e~~gv~P 291 (460)
T PRK06082 215 VHYADYLEYVIEKEG-GIGAFIAEAVRNTDVQVPSKAYWKRIREICDKHNVLLIIDDIP-NG-MGRSGEWFTHQAFDIEP 291 (460)
T ss_pred HHHHHHHHHHHHCCC-CEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCC-CC-CCCCCCHHHHHCCCCCC
T ss_conf 899999999860579-7899996166678880689899999999999729857603320-28-87544344663179998
Q ss_pred CCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-H
Q ss_conf 6521001346565302---67524510010000121100001357750257898878988627102247899999999-8
Q gi|254780486|r 223 NVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITD-K 298 (381)
Q Consensus 223 ~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~-~ 298 (381)
+++ ||+|++|+.. |.++++.++.+... .+.++ ||-+.+|..|++++++|++++++. +.++.++..+++. +
T Consensus 292 DIv---~~gKglggG~~Pisav~~~~~~~~~~~-~~~g~-~T~~gnPl~cAaAlA~L~iie~e~-l~~~a~~~G~~l~~~ 365 (460)
T PRK06082 292 DIL---CIGKGLGGGLVPIAAMITKDKYNTAAQ-ISLGH-YTHEKSPIGCAAALATMEAIEQEG-LLDKVKADSQFMREK 365 (460)
T ss_pred CEE---EECHHHHCCCCCEEEEEEHHHHHHHCC-CCCCC-CCCCCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHH
T ss_conf 289---988164389776389987488552015-77654-367898799999999999997257-889999999999999
Q ss_pred HHH--CCCC----CCCCCCEEEEEEC--------CHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHH
Q ss_conf 764--1797----8998972899958--------9799999999999779189862288888887039996287899999
Q gi|254780486|r 299 IAN--KKIG----FSSQSHIQSIVIG--------DNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPT 364 (381)
Q Consensus 299 ~~~--~~~g----~~~~s~I~~v~~g--------d~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~ed 364 (381)
+.. ...+ +.+..-+..|.+. ....+..+..+++++|+++.+ + ....|||.|+...|++|
T Consensus 366 L~~L~~~~p~VgdVRG~GLm~giElv~d~~tk~~~~~~a~~v~~~~~~~Gl~~~~------~-~gnvirl~PPL~It~~e 438 (460)
T PRK06082 366 LLEMKAKYPVIGDVRGIGLLWGIELVTDHETKTRAYDEAEAVLYQCLNNGLSFKV------S-QGNVIQLSPPLIISREQ 438 (460)
T ss_pred HHHHHHCCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCEEEC------C-CCCEEEEECCCCCCHHH
T ss_conf 9999862997885233654999997417765656679999999999968917910------8-99989997991189999
Q ss_pred HHHHHHHHHHHHHHH
Q ss_conf 999999999998873
Q gi|254780486|r 365 IVKLFDILPQIISEG 379 (381)
Q Consensus 365 i~~~~~~l~~v~~E~ 379 (381)
||+++++|+++++|.
T Consensus 439 id~~l~~l~~al~ev 453 (460)
T PRK06082 439 LTEALAIFEEAIAKV 453 (460)
T ss_pred HHHHHHHHHHHHHHH
T ss_conf 999999999999999
No 79
>PRK06105 aminotransferase; Provisional
Probab=100.00 E-value=4.6e-32 Score=220.02 Aligned_cols=343 Identities=18% Similarity=0.201 Sum_probs=227.1
Q ss_pred HHHCCCEEEECCCCEEEECCCCCC-CCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--CC
Q ss_conf 997598399928976898034465-6677-9889999999999863786887224436885899999999840128--88
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSHDY-LALS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG--FE 91 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~dY-LGl~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g--~e 91 (381)
-+++|.|.++.+|++||||.|.-. +.|. +||+|++|+.++++ +.++....+ .-.++.-.+|.++|+++.. .+
T Consensus 35 ~rg~G~~l~D~dG~~ylD~~sg~~~~~lGh~hp~i~~Ai~~Q~~-~~~~~~~~~---~~~~~~~~~lAe~L~~~~p~~l~ 110 (460)
T PRK06105 35 ERGEGVYVYDDAGKRYIEGMAGLWSVAVGFSEQRLVEAAARQMK-KLPFYHTFS---HKSHGPVIDLAEKLVAMAPVPMS 110 (460)
T ss_pred EEEECCEEEECCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHH-HCCCEECCC---CCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 96041889979999999976238751026799999999999996-578601258---76788999999999973788848
Q ss_pred CEEEECCCCHHHHHHHHHH---------CCCCCCCCHHHHCCHHHHHHHHHCCCC--------------CEEECC----C
Q ss_conf 5167416602456556663---------168971004542026775266640876--------------403056----8
Q gi|254780486|r 92 KMLYFGSGYAANMAILSTL---------PQATDLIVYDKLVHASIREGINSGKAQ--------------AIAIPH----N 144 (381)
Q Consensus 92 ~al~~~sG~~An~~~i~~l---------~~~~d~ii~D~~~HaSi~~g~~ls~a~--------------~~~f~H----n 144 (381)
.+++.+||..||.+++..- .++..+|-.+..-|....-...+++-. ...+++ .
T Consensus 111 ~v~f~~sGSEAvE~AlKlA~~y~~a~g~~~r~~iis~~~syHG~T~ga~s~tg~~~~~~~~~~~~~~~~~~~~P~~~r~~ 190 (460)
T PRK06105 111 KVFFTNSGSEANDTVVKLIWYYNNALGRPEKKKIISRKRGYHGVTIASASLTGLPNNHRSFDLPIDRILHTGCPHYYRFG 190 (460)
T ss_pred EEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCC
T ss_conf 79983770889999999999999963898863699723763665044554208953355668998880446788434668
Q ss_pred ------------CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCC
Q ss_conf ------------8147899764310002478607971462157661346----899999863136089861311222347
Q gi|254780486|r 145 ------------NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCG 208 (381)
Q Consensus 145 ------------D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G 208 (381)
..++||+.+.+ ..+.....|++|.|.+..|.+.| |+++++||++||++||+||++ +| +|
T Consensus 191 ~~~~~~~~~~~~~~~~le~~i~~---~~~~~iAavIvEPiqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~-tG-fG 265 (460)
T PRK06105 191 LPGESEEAFATRLANELEALILA---EGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRKYDILLVADEVI-CG-FG 265 (460)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHH---HCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCC-CC-CC
T ss_conf 88878899999999999999985---198856799836724888872698689899999998569779933541-17-87
Q ss_pred CCCCE-EEEEHHCCCCCCCCCCCCCCCCCE---EEEEECCCCCCCCCCCCCC---C--EECCCCCCCCHHHHHHHHHHHH
Q ss_conf 77640-110000134652100134656530---2675245100100001211---0--0001357750257898878988
Q gi|254780486|r 209 PLGKG-LTHIIEERNNVIVMHSCSKALGSS---GALVGSNKIIYDYLINYAK---P--FIYTTSPSPILAVVACEALKLI 279 (381)
Q Consensus 209 ~~G~G-~~~~~~~~~~~iv~~TlsKa~g~~---GG~i~~~~~ii~~l~~~~~---~--~ifst~l~P~~~aaa~aal~~l 279 (381)
++|+. ..+++++.||++ ||||++|+. -|.+++++++.+.+..... . +.+|-+.+|..|++++++|+++
T Consensus 266 RtG~~fa~e~~gv~PDiv---~~gKglggG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~gnpla~Aaala~L~~i 342 (460)
T PRK06105 266 RTGNMFGCETFGIKPDIL---VLSKQLTSSYQPLSAVLINERVYDPIADESGKIGTFGHGFTASGHPVAAAVALENLAII 342 (460)
T ss_pred CCCCCCEEECCCCCCCEE---EEECCCCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 333761220587378745---66112357877504884238898765036666666532568999989999999999999
Q ss_pred HHCCCHHHHHHHHHHHHHHHHHC--CCC----CCCCCCEEEEEEC-C----------HHHHHHHHHHHHHCCEEEEEECC
Q ss_conf 62710224789999999987641--797----8998972899958-9----------79999999999977918986228
Q gi|254780486|r 280 KRKPALHKSLLQLINITDKIANK--KIG----FSSQSHIQSIVIG-D----------NKSCLNIAKNLQKKGFDIRAIRP 342 (381)
Q Consensus 280 ~~~~~~~~~l~~~~~~~~~~~~~--~~g----~~~~s~I~~v~~g-d----------~~~a~~~~~~L~~~Gi~v~~i~~ 342 (381)
+++. +.++.++..+++.+.... ..+ +.+..-+..|.+- | ...+..+.+.++++|+++.+.
T Consensus 343 ~~~~-l~~~~~~~g~~l~~~L~~l~~~p~i~~VRG~Gl~~gielv~~~~~~~~~~~~~~~~~~v~~~~~~~Gll~~~~-- 419 (460)
T PRK06105 343 EERD-LVGNAAELGARFQDRLRALADHPLVGEVRGVGLIAAVELVADKATKTPFDPPGAVGARANARAHEHGVISRAM-- 419 (460)
T ss_pred HHCC-HHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEC--
T ss_conf 8648-9999999999999999986269976888516739999985165445567720799999999999789689306--
Q ss_pred CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 8888887039996287899999999999999998873
Q gi|254780486|r 343 PTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 343 PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
| ..|||+|+...|++|||+++++|+++++|.
T Consensus 420 -----g-n~i~i~PPL~it~~eid~~~~~l~~aL~e~ 450 (460)
T PRK06105 420 -----G-DTLAFCPPLIITAAQVDEMVDRFGRALDDT 450 (460)
T ss_pred -----C-CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf -----9-989997992488999999999999999999
No 80
>PRK07480 putative aminotransferase; Validated
Probab=100.00 E-value=3.9e-32 Score=220.43 Aligned_cols=342 Identities=18% Similarity=0.202 Sum_probs=221.5
Q ss_pred HHHCCCEEEECCCCEEEECCCCC-CCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCC
Q ss_conf 99759839992897689803446-56677-988999999999986378688722443688589999999984012--888
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSHD-YLALS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF--GFE 91 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~d-YLGl~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~--g~e 91 (381)
.|++|.|.++.||++||||.|.- -..|. +||+|++++.++++ +.... +.++...++...+|-++|+++. +.+
T Consensus 40 ~ra~G~yl~D~dG~~ylD~~sg~~~~~lGh~~p~v~~Ai~~q~~-~l~~~---~~~~~~~~~~~~~lAe~L~~~~p~~l~ 115 (459)
T PRK07480 40 TRAEGVYLWDSEGNKILDGMAGLWCVNVGYGRKELADAAYRQMR-ELPYY---NTFFKTTHPPVIELAAKLAEVAPAGFN 115 (459)
T ss_pred EECEECEEEECCCCEEEECCCCHHHCCCCCCCHHHHHHHHHHHH-HCCCC---CCCCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 94520889969999999876248745168899999999999997-55770---255455788999999999984888758
Q ss_pred CEEEECCCCHHHHHHHHHH------CC---CCCCCCHHHHCCHHHHHHHHHCCC--------------CCE--EECC---
Q ss_conf 5167416602456556663------16---897100454202677526664087--------------640--3056---
Q gi|254780486|r 92 KMLYFGSGYAANMAILSTL------PQ---ATDLIVYDKLVHASIREGINSGKA--------------QAI--AIPH--- 143 (381)
Q Consensus 92 ~al~~~sG~~An~~~i~~l------~~---~~d~ii~D~~~HaSi~~g~~ls~a--------------~~~--~f~H--- 143 (381)
.+++.+||..||.+++..- .+ +..+|-.+..-|....-+..+++- ..+ +|+.
T Consensus 116 ~v~f~~SGsEA~E~AiKlAr~y~~~~g~~~r~~ii~~~~syHG~T~ga~s~sg~~~~~~~~~~~~~~~~~v~~P~~~~~~ 195 (459)
T PRK07480 116 HVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVVISRKNGYHGSTVAGASLGGMKYMHEQGDLPIPGIVHIDQPYWFGEG 195 (459)
T ss_pred EEEEECCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCEECCCCCCCCCC
T ss_conf 79970875899999999999999970999870899945864664066666338843234568888885664798743346
Q ss_pred --CCH--------HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCC
Q ss_conf --881--------47899764310002478607971462157661346----8999998631360898613112223477
Q gi|254780486|r 144 --NNI--------NSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGP 209 (381)
Q Consensus 144 --nD~--------~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~ 209 (381)
.|. ++|++.+.+ ..++....|++|.|-+..|.+.| |+++++||++||++||+||++ +| +|+
T Consensus 196 ~~~~~~~~~~~~~~~le~~i~e---~~~~~iAavi~EPi~g~gG~~~~p~~yl~~lr~lc~~~giLlI~DEV~-tG-fGR 270 (459)
T PRK07480 196 GDMTPEEFGLAAARQLEAKILE---LGAENVAAFIGEPIQGAGGVIIPPSTYWPEIQRICRKYDILLVADEVI-CG-FGR 270 (459)
T ss_pred CCCCHHHHHHHHHHHHHHHHHH---HCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC-CC-CCC
T ss_conf 7898678789999999999985---088765787625524668842288899999999886439779997353-28-875
Q ss_pred CCCEE-EEEHHCCCCCCCCCCCCCCCCCE---EEEEECCCCCCCCCCCCCCCEEC--CCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 76401-10000134652100134656530---26752451001000012110000--13577502578988789886271
Q gi|254780486|r 210 LGKGL-THIIEERNNVIVMHSCSKALGSS---GALVGSNKIIYDYLINYAKPFIY--TTSPSPILAVVACEALKLIKRKP 283 (381)
Q Consensus 210 ~G~G~-~~~~~~~~~~iv~~TlsKa~g~~---GG~i~~~~~ii~~l~~~~~~~if--st~l~P~~~aaa~aal~~l~~~~ 283 (381)
+|... .+++++.||++ ||+|++|+. =|.+++++++.+.+......+.. |-+.+|..|++++++|++++++.
T Consensus 271 TG~~fa~e~~gv~PDii---~~gKglggG~~Pl~av~~~~~i~~~~~~~~~~~~hg~T~~Gnplacaaala~L~~i~~~~ 347 (459)
T PRK07480 271 TGEWFGHQHFGFEPDLM---TIAKGLTSGYIPMGAVIVGDRVAEVLIEEGGEFNHGFTYSGHPVAAAVALANLRILRDEG 347 (459)
T ss_pred CCCCCCCCCCCCCCCEE---EECCCCCCCCCCCEEEEECHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 54542356779888689---875200289877369987389998761178754247789999799999999999986162
Q ss_pred CHHHHHH-HHHHHHHHHH-H-CCCC----CCCCCCEEEEEE-CCH----------HHHHHHHHHHHHCCEEEEEECCCCC
Q ss_conf 0224789-9999999876-4-1797----899897289995-897----------9999999999977918986228888
Q gi|254780486|r 284 ALHKSLL-QLINITDKIA-N-KKIG----FSSQSHIQSIVI-GDN----------KSCLNIAKNLQKKGFDIRAIRPPTV 345 (381)
Q Consensus 284 ~~~~~l~-~~~~~~~~~~-~-~~~g----~~~~s~I~~v~~-gd~----------~~a~~~~~~L~~~Gi~v~~i~~PtV 345 (381)
+.++.+ +..+++.+.. . ...+ +.+..-+..|.+ .|. .....+.+.++++|+++.+.
T Consensus 348 -l~~~~~~~~g~~l~~~l~~L~~~p~i~~vRG~Glm~giel~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----- 421 (459)
T PRK07480 348 -IVERVRTDTGPYLQKRLRELADHPLVGEVRGVGLVGALELVKDKATRERFAAGGGVGTICRDHCFNNGLIMRAV----- 421 (459)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEC-----
T ss_conf -99999999999999999985159968772305528999974374434456633689999999999799499616-----
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 888703999628789999999999999999887
Q gi|254780486|r 346 PINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 346 p~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
+ ..||++|+...|++|||++++.|++++++
T Consensus 422 --g-n~l~l~PPL~it~~eid~~l~~l~~aL~~ 451 (459)
T PRK07480 422 --G-DRMILSPPLVISRAEIDELVEKARKALDL 451 (459)
T ss_pred --C-CEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf --9-98999788238899999999999999999
No 81
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=2.2e-32 Score=222.01 Aligned_cols=343 Identities=17% Similarity=0.189 Sum_probs=225.9
Q ss_pred HHHCCCEEEECCCCEEEECCCCCC---CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC--
Q ss_conf 997598399928976898034465---667798899999999998637868872244368858999999998401288--
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSHDY---LALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF-- 90 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~dY---LGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~-- 90 (381)
.+++|.+.++.||++||||.|.-. ||- +||+|.+|+.++++ +....+ . ...+.+.-.+|-++|+++...
T Consensus 40 ~rg~G~~l~D~dG~~ylD~~~g~~~~~lGH-~~p~i~~Ai~~Q~~-~l~~~~--~--~~~~~~~~~~lae~L~~~~P~~~ 113 (457)
T PRK05639 40 KRGFGPFIEDVDGNVFIDFLAGAAAASTGY-SHPKLVKAVKEQVE-LIQHSM--I--GYTHSERAIRVAEKLVKISPIKN 113 (457)
T ss_pred EEEEECEEEECCCCEEEECCHHHHHHHHCC-CCHHHHHHHHHHHH-HCCCCC--C--CCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 972409899699698888054188667617-96999999999986-444765--7--77488799999999997589887
Q ss_pred CCEEEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHHHHHHHHCCC---------------CCEEECC---------
Q ss_conf 8516741660245655666---316897100454202677526664087---------------6403056---------
Q gi|254780486|r 91 EKMLYFGSGYAANMAILST---LPQATDLIVYDKLVHASIREGINSGKA---------------QAIAIPH--------- 143 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi~~g~~ls~a---------------~~~~f~H--------- 143 (381)
+.+++.+||..||.+++.. ..++..+|-.+..-|.+..-+..+++. ...+|++
T Consensus 114 ~~v~f~~sGSEAvE~AiKlAr~~t~r~~Iis~~~~yHG~T~ga~s~~~~~~~~~~~~~~~~~~~~~~p~p~~~r~~~~~~ 193 (457)
T PRK05639 114 SKVIFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVASFQVSQKRGYSPLMPNVFWLPYPNPYRNIWGIN 193 (457)
T ss_pred CEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCC
T ss_conf 75998186589999999998642598869999357798651400014687544568888899847817986334533567
Q ss_pred --CCHHHHHH----HHHHHHH---CCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCC
Q ss_conf --88147899----7643100---02478607971462157661346----89999986313608986131122234777
Q gi|254780486|r 144 --NNINSFAE----NINKWRK---SGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPL 210 (381)
Q Consensus 144 --nD~~~Le~----~l~~~~~---~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~ 210 (381)
++.+.+.. .++.... ..+.....|++|.|.+..|.+.| |+++++||++||++||+||++ +| +|++
T Consensus 194 ~~~~~~~~~~~~~~~le~~i~~~~~~~~~iAavi~EPiqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~-tG-fGRt 271 (457)
T PRK05639 194 GYEEPNELINRVLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLNELGILLVMDEVQ-TG-IGRT 271 (457)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCC-CC-CCCC
T ss_conf 633789999999999999998614688978999982766887986289899889999997639868731032-27-7625
Q ss_pred CCEE-EEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHH
Q ss_conf 6401-100001346521001346565302---675245100100001211000013577502578988789886271022
Q gi|254780486|r 211 GKGL-THIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALH 286 (381)
Q Consensus 211 G~G~-~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~ 286 (381)
|+.. .+++++.||++ ||+|++|+ | +.+++++++.+... ....+|.+.+|..|++++++|+++++++ +.
T Consensus 272 G~~fa~e~~gv~PDii---~~gKgl~~-G~plsav~~~~~i~~~~~---g~~~~T~~gnpla~Aaa~a~L~~i~~~~-l~ 343 (457)
T PRK05639 272 GKWFASEWFSVKPDMI---IFGKGVAS-GMGLSGVIGRKEIMDITS---GSALLTPAANPVISAAAEATLEIIEEEN-LL 343 (457)
T ss_pred CCHHHHHCCCCCCCEE---EECCHHCC-CCCCEEEEECHHHHHHHC---CCCCCCCCCCHHHHHHHHHHHHHHHHCC-HH
T ss_conf 6545664379999999---97722107-987079998488775405---7655578865299999999999999655-99
Q ss_pred HHHHHHHHHHH----HHHHCC--C-CCCCCCCEEEEEE------CCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEE
Q ss_conf 47899999999----876417--9-7899897289995------897999999999997791898622888888870399
Q gi|254780486|r 287 KSLLQLINITD----KIANKK--I-GFSSQSHIQSIVI------GDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLR 353 (381)
Q Consensus 287 ~~l~~~~~~~~----~~~~~~--~-g~~~~s~I~~v~~------gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlR 353 (381)
++.++..+++. ++.... + .+.+..-+..|.+ .++..+.++..+++++|+++.+. ......||
T Consensus 344 ~~a~~~g~~l~~~L~~L~~~~~~v~dVRG~GL~~giel~~~~~~~~~~~~~~v~~~~~~~Gll~~~~-----g~~~nvir 418 (457)
T PRK05639 344 KNALEVGNFIMKRLEEMKEVFEIIGDVRGKGLMIGVEIVKENGRPDPEMTGKICWRAFELGLILPSY-----GMFGNVIR 418 (457)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCEEECC-----CCCCCEEE
T ss_conf 9999999999999999886389756550378099999943789989999999999999679688158-----99999899
Q ss_pred EECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 96287899999999999999998873
Q gi|254780486|r 354 ISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 354 i~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
|.|+..+|++|||+++++|+++++|-
T Consensus 419 l~PPL~it~~eid~~~~il~~al~ea 444 (457)
T PRK05639 419 ITPPLVLTKEVAEKGLEIIERAIKDA 444 (457)
T ss_pred EECCEECCHHHHHHHHHHHHHHHHHH
T ss_conf 97893168999999999999999999
No 82
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=3.8e-33 Score=226.77 Aligned_cols=339 Identities=14% Similarity=0.193 Sum_probs=225.3
Q ss_pred HHHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--C
Q ss_conf 9975983999289768980344---6566779889999999999863786887224436885899999999840128--8
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG--F 90 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g--~ 90 (381)
.+++|.|..+.+|++||||.|. .-||- +||+|.+|+.++++ +....+ .+ .-+++...+|-++|+++++ .
T Consensus 40 ~rgeG~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~v~~Ai~~Ql~-~l~~~~-~~---~~~~~~~~~lae~L~~~~p~~l 113 (452)
T PRK06943 40 ARGEGAWLYDRDGRRYLDAISSWWVNLFGH-ANPRINAALKDQLD-TLEHAM-LA---GCTHEPAIELAERLAALTGHTL 113 (452)
T ss_pred EECCCCEEEECCCCEEEECCHHHHHHHHCC-CCHHHHHHHHHHHH-HCCCCC-CC---CCCCHHHHHHHHHHHHHCCCCC
T ss_conf 968028899798999998344389771357-96999999999986-574713-57---7687699999999997466655
Q ss_pred CCEEEECCCCHHHHHHHHHH---------CCCCCCCCHHHHCCHHHHHHHHHCC--------------CCCEEECC----
Q ss_conf 85167416602456556663---------1689710045420267752666408--------------76403056----
Q gi|254780486|r 91 EKMLYFGSGYAANMAILSTL---------PQATDLIVYDKLVHASIREGINSGK--------------AQAIAIPH---- 143 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~l---------~~~~d~ii~D~~~HaSi~~g~~ls~--------------a~~~~f~H---- 143 (381)
..+++.+||..||.+++..- .++..+|.....-|.+..-..-+++ ....++++
T Consensus 114 ~~v~f~~SGSEA~E~AiKlA~~~~~~rg~~~r~~ii~~~~syHG~T~ga~s~t~~~~~~~~~~p~~~~~~~~~~p~~~~~ 193 (452)
T PRK06943 114 GHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGA 193 (452)
T ss_pred CEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCEEECCCCHHHCCCCCCCCCCCEECCCCCCCCC
T ss_conf 75996087189999999999999986189986058734788688763014626851203356776777624589975567
Q ss_pred -----------CCHHHHHHHHHHHHHCCCCCCCEEEECC-CCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCC
Q ss_conf -----------8814789976431000247860797146-2157661346----89999986313608986131122234
Q gi|254780486|r 144 -----------NNINSFAENINKWRKSGGKGFPWIVVES-IYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVC 207 (381)
Q Consensus 144 -----------nD~~~Le~~l~~~~~~~~~~~~~vv~eg-v~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~ 207 (381)
++++++|+.+++. +.....|++|. |.+-.|.+.| |+++++||++||++||+||++ +| +
T Consensus 194 ~~~~~~~~~~~~~~~~le~~~~~~----~~~iAAvivEP~iqg~gG~~~~~~~yl~~lr~lc~~~giLlI~DEV~-tG-f 267 (452)
T PRK06943 194 RPGETAADVAARALADVRRLFAER----AGKIAALIVEPLVQCAAGMAMHDPSYVRGLRALCDEYGVHLIADEIA-VG-C 267 (452)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHC----CCCEEEEEEECCCCCCCCEEECCHHHHHHHHHHHHHCCCEEEECCCC-CC-C
T ss_conf 888877789999999999999856----99778999957514679618588999999999986449648713320-28-8
Q ss_pred CCCCCE-EEEEHHCCCCCCCCCCCCCCCCCE---EEEEECCCCCCCCCCC--CCCCEEC--CCCCCCCHHHHHHHHHHHH
Q ss_conf 777640-110000134652100134656530---2675245100100001--2110000--1357750257898878988
Q gi|254780486|r 208 GPLGKG-LTHIIEERNNVIVMHSCSKALGSS---GALVGSNKIIYDYLIN--YAKPFIY--TTSPSPILAVVACEALKLI 279 (381)
Q Consensus 208 G~~G~G-~~~~~~~~~~~iv~~TlsKa~g~~---GG~i~~~~~ii~~l~~--~~~~~if--st~l~P~~~aaa~aal~~l 279 (381)
|++|+. ..+++++.||++ ||+|++|+. -|.+++++++.+.+.. ..++|.+ |-+.+|..|++++++|+++
T Consensus 268 GRTG~~fa~e~~gv~PDii---t~gKgl~gG~~Plsav~~~~ei~~~~~~~~~~~~~~h~~T~~GnplacAaala~L~~l 344 (452)
T PRK06943 268 GRTGTFFACEQAGVWPDFL---CLSKGISGGYLPLSLVLSRDEIFDAFYDDDTTRGFLHSHSYTGNPLACRAAVATLDLF 344 (452)
T ss_pred CCCCCCCCCCCCCCCCEEE---EECCHHHCCCCCCCEEEECHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 6451771023469988299---9765212898653124303889986437997678675778898889999999999999
Q ss_pred HHCCCHHHHHHHHHHHHHH-HHHC-C---C-CCCCCCCEEEEEEC-----CHHHHHHHHHHHHHCCEEEEEECCCCCCCC
Q ss_conf 6271022478999999998-7641-7---9-78998972899958-----979999999999977918986228888888
Q gi|254780486|r 280 KRKPALHKSLLQLINITDK-IANK-K---I-GFSSQSHIQSIVIG-----DNKSCLNIAKNLQKKGFDIRAIRPPTVPIN 348 (381)
Q Consensus 280 ~~~~~~~~~l~~~~~~~~~-~~~~-~---~-g~~~~s~I~~v~~g-----d~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~ 348 (381)
+++. +.++.++..+++.+ +... . + .+.+..-+..|.+. ....+..+...++++|+++.+. |
T Consensus 345 ~~e~-l~~~~~~~g~~l~~~L~~l~~~~~V~dVRG~GL~~gvel~~~~~~~~~~~~~i~~~~~~~Gll~~~~-------g 416 (452)
T PRK06943 345 ARDD-VLARNARKSALLRAALAPLAAHPQVRHLRQRGTIFAFDVALDGDAARTFSRRFFEHALERELLLRPI-------G 416 (452)
T ss_pred HHCC-HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEC-------C
T ss_conf 8657-9999999999999999987359988886307589999966787645799999999999699289864-------9
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 703999628789999999999999999887
Q gi|254780486|r 349 TARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 349 ~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
..||++|+...|++|||.+++.|+++++|
T Consensus 417 -~~i~l~PPL~it~~eid~~~~~L~~aL~~ 445 (452)
T PRK06943 417 -TTVYLMPPYVLDDEEIAWLAQRTRATLDA 445 (452)
T ss_pred -CEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf -99999799038899999999999999999
No 83
>PRK12403 putative aminotransferase; Provisional
Probab=100.00 E-value=3.7e-32 Score=220.61 Aligned_cols=340 Identities=18% Similarity=0.190 Sum_probs=220.5
Q ss_pred HHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--CC
Q ss_conf 975983999289768980344---6566779889999999999863786887224436885899999999840128--88
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG--FE 91 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g--~e 91 (381)
+++|.|..+.||++||||.|. .-||- +||+|.+|+.++++ +.... +..+..+.+...+|.++|+++.. .+
T Consensus 42 ra~G~~v~D~dG~~ylD~~sg~~~~~lGh-~~p~I~~Ai~~q~~-~l~~~---~~~~~~~~~~~~elAe~L~~~~P~~~~ 116 (460)
T PRK12403 42 RGEGLHLWDNDGKRYLDGMSGLWCTNLGY-GRKDLAAAAARQME-QLPYY---NMFFHTTHPAVIELSELLFSLLPGHYS 116 (460)
T ss_pred EEEECEEEECCCCEEEECCCCHHHHHHCC-CCHHHHHHHHHHHH-HCCCC---CCCCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 62228899799899999563688643557-95999999999997-55871---565456788999999999975787658
Q ss_pred CEEEECCCCHHHHHHHHHHC-------CCCC-CCCH-HHHCCHHHHHHHHHCCCC-------------CEEECC--C---
Q ss_conf 51674166024565566631-------6897-1004-542026775266640876-------------403056--8---
Q gi|254780486|r 92 KMLYFGSGYAANMAILSTLP-------QATD-LIVY-DKLVHASIREGINSGKAQ-------------AIAIPH--N--- 144 (381)
Q Consensus 92 ~al~~~sG~~An~~~i~~l~-------~~~d-~ii~-D~~~HaSi~~g~~ls~a~-------------~~~f~H--n--- 144 (381)
.+++.+||..||.+++..-- +++. .|+. ...-|.+..-+..+++.+ .+.++. .
T Consensus 117 ~v~f~~sGSEA~E~AiklAr~y~~~~g~~~~~~ii~~~~~yHG~T~ga~s~sg~~~~~~~~~~~p~~~~~~~P~~~~~~~ 196 (460)
T PRK12403 117 HAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAATALGGMKFMHEMGGLIPDVAHIDEPYWYANGG 196 (460)
T ss_pred EEEECCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 69844871899999999999999860899746999966887740798872467412445678899841147754455667
Q ss_pred C--H--------HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCC
Q ss_conf 8--1--------47899764310002478607971462157661346----89999986313608986131122234777
Q gi|254780486|r 145 N--I--------NSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPL 210 (381)
Q Consensus 145 D--~--------~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~ 210 (381)
+ . .++++.+ .+..+.....|++|.|.+..|.+.| |+++++||++||++||+||++ +| +||+
T Consensus 197 ~~~~~~~~~~~~~~le~~i---~~~~~~~iAavi~EPi~g~gG~i~pp~~yl~~lr~lc~~~gillI~DEV~-tG-fGRt 271 (460)
T PRK12403 197 ELTPAEFGRRAALQLEEKI---LELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQYDVLLCADEVI-GG-FGRT 271 (460)
T ss_pred CCCHHHHHHHHHHHHHHHH---HHHCCCCEEEEEECCCCCCCCEECCCHHHHHHHHHHHHCCCCEEEEECCC-CC-CCCC
T ss_conf 7887788899999999999---96289866999954522558657275677699999973259669986251-27-7634
Q ss_pred CCEE-EEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEE--CCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 6401-100001346521001346565302---675245100100001211000--0135775025789887898862710
Q gi|254780486|r 211 GKGL-THIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFI--YTTSPSPILAVVACEALKLIKRKPA 284 (381)
Q Consensus 211 G~G~-~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~i--fst~l~P~~~aaa~aal~~l~~~~~ 284 (381)
|++. .+++++.||++ ||||++|+.. |.+++++++.+.+......+. +|-+.+|..|++++++|++++++.
T Consensus 272 G~~fa~e~~gV~PDiv---t~gK~l~gG~~Plsav~~~~~i~~~~~~~~~~~~hg~T~~Gnpla~Aaala~l~~i~~e~- 347 (460)
T PRK12403 272 GEWFAHEHFGFEPDTL---SIAKGLTSGYVPMGGLVLSKRIAEALVEQGGVFAHGLTYSGHPVAAAVAIANLKALRDEG- 347 (460)
T ss_pred CCCCCCCCCCCCCCEE---EECCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC-
T ss_conf 3773002179587712---221244578776179973589998750378650147788999899999999999998666-
Q ss_pred HHHHHHH-HHHHHHHHH---HCCCC----CCCCCCEEEEEECC-----------HHHHHHHHHHHHHCCEEEEEECCCCC
Q ss_conf 2247899-999999876---41797----89989728999589-----------79999999999977918986228888
Q gi|254780486|r 285 LHKSLLQ-LINITDKIA---NKKIG----FSSQSHIQSIVIGD-----------NKSCLNIAKNLQKKGFDIRAIRPPTV 345 (381)
Q Consensus 285 ~~~~l~~-~~~~~~~~~---~~~~g----~~~~s~I~~v~~gd-----------~~~a~~~~~~L~~~Gi~v~~i~~PtV 345 (381)
+.++.++ ...++.+.. ....+ +.+..-+..|.+-+ ...+..+.+..+++|+++.+.
T Consensus 348 l~~~~~~~~g~~l~~~L~~l~~~~p~vgdVRG~GLm~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Glli~~~----- 422 (460)
T PRK12403 348 VVTRVKDDTGPYLQRCLREVFGDHPLVGEVQGAGLVAALQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRST----- 422 (460)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEEC-----
T ss_conf 999999999999999999987259958863014549999942576421136525789999999999799899736-----
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 888703999628789999999999999999887
Q gi|254780486|r 346 PINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 346 p~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
..+++++|+...|++|||+++++|++.++|
T Consensus 423 ---~~~~~l~PPLiit~~eid~~~~~l~~al~~ 452 (460)
T PRK12403 423 ---LGRMIMAPALVAGRAEIDELVDKTRIAVDR 452 (460)
T ss_pred ---CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
T ss_conf ---980999899438899999999999999999
No 84
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=100.00 E-value=3.4e-32 Score=220.81 Aligned_cols=338 Identities=19% Similarity=0.222 Sum_probs=223.7
Q ss_pred HHCCCEEEECCCCEEEECCC---CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-CC-
Q ss_conf 97598399928976898034---46566779889999999999863786887224436885899999999840128-88-
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTS---HDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG-FE- 91 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s---~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g-~e- 91 (381)
+++|.|.++.||++||||.+ +.-||- +||+|.+|+.++++ +. .+.+.+++ .++.-.+|-++|++++. ..
T Consensus 43 ra~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~Av~~Q~~-~l-~~~~~~~~---~~~~~~elae~L~~~~p~~~~ 116 (442)
T PRK05769 43 RGEGVWVEDVDGNVYLDFNSGIAVTNVGH-AHPKVVEAIKEQAE-KF-LHYSLTDF---YYEPAVELAERLVEIAPGGFP 116 (442)
T ss_pred EEECCEEEECCCCEEEEECCCHHHHHHCC-CCHHHHHHHHHHHH-HC-CCCCCCCC---CCHHHHHHHHHHHHHCCCCCC
T ss_conf 73539899698699999254477413448-97999999999986-17-67456776---888999999999985786667
Q ss_pred -CEEEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHHHHHHHHCCC---------------CCEEECC--------C
Q ss_conf -516741660245655666---316897100454202677526664087---------------6403056--------8
Q gi|254780486|r 92 -KMLYFGSGYAANMAILST---LPQATDLIVYDKLVHASIREGINSGKA---------------QAIAIPH--------N 144 (381)
Q Consensus 92 -~al~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi~~g~~ls~a---------------~~~~f~H--------n 144 (381)
.+++.+||..||..++.. ..++..+|-.+..-|....-...+++. ..++|++ .
T Consensus 117 ~~v~f~~sGSEAvE~AiklAr~~tgr~~ii~~~~syHG~t~ga~s~t~~~~~~~~~~~p~~p~~~~~p~p~~~~~~~~~~ 196 (442)
T PRK05769 117 KKVFFTNSGTESNEAAIKLARYYTGRKYIIAFLGAFHGRTYGSMSLTASKPVQRRGFFPLMPGVIHVPYPNPYRNPFGYE 196 (442)
T ss_pred CEEEEECCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHCCCCHHHCCCCCCCCCCCEEECCCCCCCCCCCCC
T ss_conf 57998186778999999998986599869972486778863365320783011047789999927807897345655778
Q ss_pred CHH--------HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCC
Q ss_conf 814--------7899764310002478607971462157661346----8999998631360898613112223477764
Q gi|254780486|r 145 NIN--------SFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGK 212 (381)
Q Consensus 145 D~~--------~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~ 212 (381)
+.+ .+|+.+.+. ...+.....|++|.|.+..|.+.| +++++++|++||++||+||++ +| +|++|.
T Consensus 197 ~~~~~~~~~~~~le~~i~~~-~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~l~~lc~~~gillI~DEV~-tG-fGRtG~ 273 (442)
T PRK05769 197 NPEELGNAVLDFIEDYLFKT-LVPPEEVAAIFFEPIQGEGGYVVPPKNFFKELRKLADKYGILLIVDEVQ-TG-FGRTGK 273 (442)
T ss_pred CHHHHHHHHHHHHHHHHHHH-CCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCC-CC-CCCCCC
T ss_conf 98999999999999999873-5898978999998977788970689899989999998749358711101-27-775566
Q ss_pred EE-EEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHH
Q ss_conf 01-100001346521001346565302---67524510010000121100001357750257898878988627102247
Q gi|254780486|r 213 GL-THIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKS 288 (381)
Q Consensus 213 G~-~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~ 288 (381)
.. ++++++.||++ |+||++|+ | |.+++++++.+.-. ..+-.|-+.+|..|++++++|+++++ .+.++
T Consensus 274 ~fa~e~~gv~PDiv---~~gK~lgg-G~Plsav~~~~~i~~~~~---g~h~~T~~g~pl~~aaa~a~L~~lee--~l~~~ 344 (442)
T PRK05769 274 MFAIEHFGVEPDII---TLAKAIAG-GLPLGAVIGRAELMFLPP---GSHANTFGGNPVAAAAALATLELIEE--GLLEN 344 (442)
T ss_pred CCHHHCCCCCCCEE---EECCHHCC-CCCEEEEEECHHHHCCCC---CCCCCCCCCCHHHHHHHHHHHHHHHH--HHHHH
T ss_conf 21310467788889---97401038-874089998067503777---87151899867999999999999988--89999
Q ss_pred HHHHHHHHH-HHHH--CCCC----CCCCCCEEEEEE------CCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEE
Q ss_conf 899999999-8764--1797----899897289995------89799999999999779189862288888887039996
Q gi|254780486|r 289 LLQLINITD-KIAN--KKIG----FSSQSHIQSIVI------GDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRIS 355 (381)
Q Consensus 289 l~~~~~~~~-~~~~--~~~g----~~~~s~I~~v~~------gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~ 355 (381)
.++..+++. ++.. ...+ +.+..-+..|.+ .+.....++.++++++|+++.+. +...|||.
T Consensus 345 v~~~G~~l~~~L~~l~~~~p~v~~vRG~Gl~~giel~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~-------g~~~i~~~ 417 (442)
T PRK05769 345 AARLGEYLLKRLTELKEEYEFIGDVRGLGLMIGVELVKDRKEPDPKLRDKVLREAFKRGLLLLGA-------GKSAIRII 417 (442)
T ss_pred HHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCEEEEEC-------CCCEEEEE
T ss_conf 99999999999999986299867603434599999815777879999999999999699599317-------99979997
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 287899999999999999998873
Q gi|254780486|r 356 ITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 356 v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
++..+|++||++++++|+++++|+
T Consensus 418 PpL~it~~eid~~~~~l~~al~ev 441 (442)
T PRK05769 418 PPLVITEEEADTGLEILEEAIKEV 441 (442)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 994699999999999999999986
No 85
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=100.00 E-value=3.2e-32 Score=220.97 Aligned_cols=341 Identities=14% Similarity=0.170 Sum_probs=228.0
Q ss_pred HHHHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--
Q ss_conf 99975983999289768980344---6566779889999999999863786887224436885899999999840128--
Q gi|254780486|r 15 KIKSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG-- 89 (381)
Q Consensus 15 ~~~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g-- 89 (381)
..+++|.|.++.||++||||.|. +-||- .||+|.+|+.+++. +..... .+. -+++.-.+|-++|.++..
T Consensus 50 I~rgeG~~l~D~dG~~yLD~~sg~~~~~lGh-~~p~i~~Ai~~Q~~-~l~~~~-~~~---~~~~~~~~Lae~L~~~~P~~ 123 (472)
T PRK08742 50 IARGEGAWLVGHDGRRYLDAVSSWWTNLFGH-AEPRIGAAIAAQAG-ELEQVM-LAG---FTHEPAVQLAERLLAIAPRQ 123 (472)
T ss_pred EEEEECCEEEECCCCEEEECCCCHHHHCCCC-CCHHHHHHHHHHHH-HCCCCC-CCC---CCCHHHHHHHHHHHHHCCCC
T ss_conf 8971458899799999988664489647557-98999999999997-666601-377---67718999999999857344
Q ss_pred -----CCCEEEECCCCHHHHHHHHHH---------CCCCCCCCHHHHCCHHHHHHHHHCCCC--------------CEEE
Q ss_conf -----885167416602456556663---------168971004542026775266640876--------------4030
Q gi|254780486|r 90 -----FEKMLYFGSGYAANMAILSTL---------PQATDLIVYDKLVHASIREGINSGKAQ--------------AIAI 141 (381)
Q Consensus 90 -----~e~al~~~sG~~An~~~i~~l---------~~~~d~ii~D~~~HaSi~~g~~ls~a~--------------~~~f 141 (381)
.+.+++.+||..||..++..- .++..+|-.+..-|.+..-++.+++-. ..++
T Consensus 124 ~~~~~l~~Vff~~SGSEAvE~AiKlA~~y~~~rg~~~r~~ii~~~~~YHG~T~ga~s~~~~~~~~~~~~~~~~~~~~~p~ 203 (472)
T PRK08742 124 PGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALSVGDIPLYRRVYAPLLLESLFAPS 203 (472)
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEECCC
T ss_conf 56677687997186689999999999999995399877158730587888727656515883225677787888456589
Q ss_pred CC---------------CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC-CCHHH----HHHHHHHHHHCCEEEEECCC
Q ss_conf 56---------------881478997643100024786079714621576-61346----89999986313608986131
Q gi|254780486|r 142 PH---------------NNINSFAENINKWRKSGGKGFPWIVVESIYSMD-GDKAP----LDDLVKIANDYDGFIVVDEA 201 (381)
Q Consensus 142 ~H---------------nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~-G~~ap----L~~i~~l~~~y~~~LivDEa 201 (381)
++ ++.+.||..+++ .+.....+++|.|.... |.+.| |++++++|++||++||+||+
T Consensus 204 p~~~~~~~~~~~~~~~~~~~~~le~~~~~----~~~~iAA~IiEPviqg~GG~~~p~~~yl~~lr~lc~~~giLLI~DEV 279 (472)
T PRK08742 204 PDAYLAEPGQSAEDYALQAADALQALFEQ----SPGEICALILEPRVQCAGGMRMHHPAYLRRARELCDAHGAFLIADEI 279 (472)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHH----CCCCEEEEEECCCCCCCCCEECCCHHHHHHHHHHHHHHCCEEEECCC
T ss_conf 97534678887789999989999999985----78864799971576653870568999999999998872966884033
Q ss_pred CCCCCCCCCCCEE-EEEHHCCCCCCCCCCCCCCCCCE---EEEEECCCCCCCCCCCC--CCCEE--CCCCCCCCHHHHHH
Q ss_conf 1222347776401-10000134652100134656530---26752451001000012--11000--01357750257898
Q gi|254780486|r 202 HATGVCGPLGKGL-THIIEERNNVIVMHSCSKALGSS---GALVGSNKIIYDYLINY--AKPFI--YTTSPSPILAVVAC 273 (381)
Q Consensus 202 h~~Gv~G~~G~G~-~~~~~~~~~~iv~~TlsKa~g~~---GG~i~~~~~ii~~l~~~--~~~~i--fst~l~P~~~aaa~ 273 (381)
+ +| +|++|... ++++++.||++ ||+|++++. -|.+++++++.+.+... ..+|. +|-+.+|..|++++
T Consensus 280 ~-tG-fGRtG~~fa~e~~gv~PDiv---~~aKgltgGy~Plsav~~~~eI~~~~~~~~~~~~~~hg~Ty~GnPlacAaal 354 (472)
T PRK08742 280 A-TG-FGRTGTLFACEQAGVMPDLL---CLSKGLTGGFLPLSAVLATQQLYDAFLDDSRERAFLHSHSYTGNPLACAAAL 354 (472)
T ss_pred C-CC-CCCCCCCEEECCCCCCCCEE---EECHHHCCCCCCEEEEEECHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 0-16-87134452312467799720---1212103887770789876999976514776665135789999989999999
Q ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC------CCCCCCEEEEEECC-----------HHHHHHHHHHHHHCCEE
Q ss_conf 87898862710224789999999987641797------89989728999589-----------79999999999977918
Q gi|254780486|r 274 EALKLIKRKPALHKSLLQLINITDKIANKKIG------FSSQSHIQSIVIGD-----------NKSCLNIAKNLQKKGFD 336 (381)
Q Consensus 274 aal~~l~~~~~~~~~l~~~~~~~~~~~~~~~g------~~~~s~I~~v~~gd-----------~~~a~~~~~~L~~~Gi~ 336 (381)
++|++++++. +.++.+....++.++...... +.+..-+..|.+.+ .+....+.+.++++|++
T Consensus 355 a~L~i~~~e~-l~~~~~~~g~~l~~~~~~l~~~p~V~dVRg~GL~~gvElv~d~~~~~~~~~~~~~~~~~~~~~~~~Gll 433 (472)
T PRK08742 355 ATLDIFADDD-VIARNQPIAARMTQLAAQIGEHPAVADVRQAGMIVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVV 433 (472)
T ss_pred HHHHHHHHCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCE
T ss_conf 9999998655-999999999999999996158997898426864999997158765787877789999999999978948
Q ss_pred EEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9862288888887039996287899999999999999998873
Q gi|254780486|r 337 IRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 337 v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
+.+. | ..|||+|+...|++|||.++++++++++|-
T Consensus 434 ~r~~-------G-~~i~~~PPL~it~~eid~~~~~l~~al~ea 468 (472)
T PRK08742 434 LRPL-------G-DVLYWMPPYCVDEAQLALLADTTRHAIDEA 468 (472)
T ss_pred EEEC-------C-CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9854-------9-999997994068999999999999999999
No 86
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=100.00 E-value=2.3e-32 Score=221.84 Aligned_cols=338 Identities=16% Similarity=0.226 Sum_probs=239.5
Q ss_pred HHCCCEEEECCCCEEEECCCCC-CCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC-CCE
Q ss_conf 9759839992897689803446-56677-98899999999998637868872244368858999999998401288-851
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSHD-YLALS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF-EKM 93 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~d-YLGl~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~-e~a 93 (381)
+.+|.+.+++||++|+||+-.. =+-|. +||.|++|+.+++++ |++.+. .++.-.++-+.+.+.++. |..
T Consensus 41 ~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~--G~~fg~------Pte~Ei~~Aell~~~~p~~e~v 112 (432)
T COG0001 41 RGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLER--GLSFGA------PTELEVELAELLIERVPSIEKV 112 (432)
T ss_pred ECCCCEEEECCCCEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHH--CCCCCC------CCHHHHHHHHHHHHHCCCCCEE
T ss_conf 45578699479987540130576500088987999999999972--677789------9778999999999865865089
Q ss_pred EEECCCCHHHHHHHH---HHCCCCCCCCHHHHCCHH---HHHHHH---------HCC-------CCCEEECCCCHHHHHH
Q ss_conf 674166024565566---631689710045420267---752666---------408-------7640305688147899
Q gi|254780486|r 94 LYFGSGYAANMAILS---TLPQATDLIVYDKLVHAS---IREGIN---------SGK-------AQAIAIPHNNINSFAE 151 (381)
Q Consensus 94 l~~~sG~~An~~~i~---~l~~~~d~ii~D~~~HaS---i~~g~~---------ls~-------a~~~~f~HnD~~~Le~ 151 (381)
.++|||+.|++++|. +++++.-+|.++=-.|.+ ...++. .|- ..+..++.||++.+++
T Consensus 113 rfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~~a~~ti~~~yND~~al~~ 192 (432)
T COG0001 113 RFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPADVAKHTLVLPYNDLEALEE 192 (432)
T ss_pred EEECCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCHHHHCCEEEECCCCHHHHHH
T ss_conf 98606408999999999876479759997288888711878426767555789999999734534478845799999999
Q ss_pred HHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCC
Q ss_conf 764310002478607971462157661346----8999998631360898613112223477764011000013465210
Q gi|254780486|r 152 NINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVM 227 (381)
Q Consensus 152 ~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~ 227 (381)
.+++. ++....|++|.|-+.-|-+.| |.+|++||++||++||+||++ +|+....| |.+.++++.|++.
T Consensus 193 ~~~~~----g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEVi-TGFR~~~g-Gaq~~~gi~PDlt-- 264 (432)
T COG0001 193 AFEEY----GDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVI-TGFRVALG-GAQGYYGVEPDLT-- 264 (432)
T ss_pred HHHHC----CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCH-HHCCCCCC-CCCCCCCCCCCHH--
T ss_conf 99876----8967999954246788989898789999999999719489986221-20454776-4201008696333--
Q ss_pred CCCCCCCCC--EEEEEECCCCCCCCCCCCCCCEE-CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-----H
Q ss_conf 013465653--02675245100100001211000-013577502578988789886271022478999999998-----7
Q gi|254780486|r 228 HSCSKALGS--SGALVGSNKIIYDYLINYAKPFI-YTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDK-----I 299 (381)
Q Consensus 228 ~TlsKa~g~--~GG~i~~~~~ii~~l~~~~~~~i-fst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~-----~ 299 (381)
||+|.+|. -=|.+.|++++++.+--.++-|. .|.+.+|..++|.+++++.+++++...+++.+....+.. .
T Consensus 265 -tlGKiIGGGlP~ga~gGr~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~~~~~~L~~gl~~~~ 343 (432)
T COG0001 265 -TLGKIIGGGLPIGAFGGRAEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLDALGERLAEGLRAAA 343 (432)
T ss_pred -HHHHHHCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf -2224404775201125699999632778876456777886899999999999987365189999999999999999999
Q ss_pred HHCCCCC--CCCCCEEEEEECC-------------HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHH
Q ss_conf 6417978--9989728999589-------------799999999999779189862288888887039996287899999
Q gi|254780486|r 300 ANKKIGF--SSQSHIQSIVIGD-------------NKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPT 364 (381)
Q Consensus 300 ~~~~~g~--~~~s~I~~v~~gd-------------~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~ed 364 (381)
....+.+ ........+++.+ ......+...|+++||++.|..|-+ ..++..||++|
T Consensus 344 ~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~~ea---------~flS~ahte~d 414 (432)
T COG0001 344 ERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQFEA---------GFLSTAHTEED 414 (432)
T ss_pred HHHCCCEEEEEECCEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCCCCCCCCC---------EEEECCCCHHH
T ss_conf 983998588620425899955899888999986356999999999996882347755554---------55200468999
Q ss_pred HHHHHHHHHHHHHHHC
Q ss_conf 9999999999988738
Q gi|254780486|r 365 IVKLFDILPQIISEGN 380 (381)
Q Consensus 365 i~~~~~~l~~v~~E~~ 380 (381)
||+++++++++++++.
T Consensus 415 i~~~~~a~~~~~~~~~ 430 (432)
T COG0001 415 IDRTLEAADEAFKELA 430 (432)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999863
No 87
>PRK04612 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Provisional
Probab=100.00 E-value=1.4e-32 Score=223.20 Aligned_cols=338 Identities=16% Similarity=0.176 Sum_probs=223.9
Q ss_pred HHHHHHCCCEEEECCCCEEEECCC---CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-
Q ss_conf 999997598399928976898034---4656677988999999999986378688722443688589999999984012-
Q gi|254780486|r 13 LQKIKSKGRHRQLLRRQDIWDFTS---HDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF- 88 (381)
Q Consensus 13 l~~~~~~g~~~~~~~~~~~l~f~s---~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~- 88 (381)
+.-.+++|.+.++.||++||||.| +.=||- +||+|.+++.+++++.+.++ ..+ .++.-.+|-++|++..
T Consensus 24 ivi~r~~G~~l~D~dG~~ylD~~sg~~~~~lGh-~hp~v~~Ai~~Q~~~l~~~~----~~~--~~~~~~~lae~L~~~~~ 96 (408)
T PRK04612 24 VVLERGQGSRVWDDQGREYLDLSSGIAVSGLGH-NDPDLVAALTEQAGKLWHTS----NVF--FSAPPLKLAEELVTASR 96 (408)
T ss_pred EEEEEEECCEEEECCCCEEEEECHHHHHHHHCC-CCHHHHHHHHHHHHHCCCCC----CCC--CCHHHHHHHHHHHHCCC
T ss_conf 169985639999698899999245077512258-98999999999986525766----752--26589999999972268
Q ss_pred CCCCEEEECCCCHHHHHHHHHHC------C---CCCCCCH-HHHCCHHHHHHHHHCCC------------CCEEECCCCH
Q ss_conf 88851674166024565566631------6---8971004-54202677526664087------------6403056881
Q gi|254780486|r 89 GFEKMLYFGSGYAANMAILSTLP------Q---ATDLIVY-DKLVHASIREGINSGKA------------QAIAIPHNNI 146 (381)
Q Consensus 89 g~e~al~~~sG~~An~~~i~~l~------~---~~d~ii~-D~~~HaSi~~g~~ls~a------------~~~~f~HnD~ 146 (381)
..+.+++++||..||..++..-- + +...|+. +..-|..-.-...+++. .+...+.||+
T Consensus 97 ~~~~v~f~~SGsEAvE~AlKlAr~y~~~~G~~~~k~~ii~~~~syHG~t~~als~t~~~~~~~~~~p~p~~~~~~~~~d~ 176 (408)
T PRK04612 97 FAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLASVTATAQPKYQEGYEPLPGGFRYVDFNDV 176 (408)
T ss_pred CCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCEEECCCCCH
T ss_conf 87669971874689999999999998732887777699998585259876742256784334688899885254366749
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-EEEHHCC
Q ss_conf 47899764310002478607971462157661346----899999863136089861311222347776401-1000013
Q gi|254780486|r 147 NSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL-THIIEER 221 (381)
Q Consensus 147 ~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~-~~~~~~~ 221 (381)
+.+++.+. +.....|++|.|-+..|.+.| +++++++|++||++||+||++ +| +|++|... .+++++.
T Consensus 177 ~~le~~~~------~~~iAAvivEPi~g~gG~~~~~~~yl~~l~~lc~~~gillI~DEV~-TG-fGRtG~~fa~~~~~v~ 248 (408)
T PRK04612 177 EALEAAMA------GGDVAAVMLEPIQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQ-CG-MGRTGTLFAHWQEQVT 248 (408)
T ss_pred HHHHHHCC------CCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECC-CC-CCCCCCHHHHHHCCCC
T ss_conf 99997156------9978999997867888830689999999999997569469850122-47-8867620355512899
Q ss_pred CCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 46521001346565302---675245100100001211000013577502578988789886271022478999999998
Q gi|254780486|r 222 NNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDK 298 (381)
Q Consensus 222 ~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~ 298 (381)
||++ ||+|++|+ | |.+++++++.+.+.....+. |-+.+|..|++++++|++++++. +.++.+++.+++.+
T Consensus 249 PDii---~~gKglg~-G~Pl~av~~~~~i~~~~~~~~h~~--T~~gnpla~aaala~L~~i~~~~-l~~~~~~~g~~l~~ 321 (408)
T PRK04612 249 PDIV---TLAKALGG-GFPIGAMLAGPKVAETMQFGAHGT--TFGGNPLAAAVARVALRKLASPQ-IAANVARQSAALRA 321 (408)
T ss_pred CCEE---EEEHHHCC-CCCEEEEEECHHHHHHCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHH
T ss_conf 9989---97232238-876289998688885146899788--88735999999999999998666-99999999999999
Q ss_pred -HHH--CCCC----CCCCCCEEEEEEC--CHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf -764--1797----8998972899958--979999999999977918986228888888703999628789999999999
Q gi|254780486|r 299 -IAN--KKIG----FSSQSHIQSIVIG--DNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLF 369 (381)
Q Consensus 299 -~~~--~~~g----~~~~s~I~~v~~g--d~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~ 369 (381)
+.. ...+ +.+..-+..+.+. ....+..+.+.++++|+++.+ .+...|||.|+...|++|||+.+
T Consensus 322 ~L~~l~~~~~~i~~vRG~GLm~giel~~~~~~~~~~i~~~~~~~Gll~~~-------~g~~~irl~PPL~it~~eide~l 394 (408)
T PRK04612 322 GLEALNAEFGVFAQIRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQ-------AGPDVLRFVPALNLTDAELADGL 394 (408)
T ss_pred HHHHHHHCCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHHCCCEEEC-------CCCCEEEEECCCCCCHHHHHHHH
T ss_conf 99998740798883220446999995478862699999999978919931-------79997999688338899999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999998873
Q gi|254780486|r 370 DILPQIISEG 379 (381)
Q Consensus 370 ~~l~~v~~E~ 379 (381)
++|++++++.
T Consensus 395 ~~l~~al~~~ 404 (408)
T PRK04612 395 ARLRLALAAY 404 (408)
T ss_pred HHHHHHHHHH
T ss_conf 9999999999
No 88
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=100.00 E-value=2.7e-33 Score=227.70 Aligned_cols=334 Identities=16% Similarity=0.169 Sum_probs=222.0
Q ss_pred HHHHHHHHHHHCCCEEEECCCCEEEECCCCCC-CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99999999997598399928976898034465-66779889999999999863786887224436885899999999840
Q gi|254780486|r 8 FYEERLQKIKSKGRHRQLLRRQDIWDFTSHDY-LALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAAD 86 (381)
Q Consensus 8 ~~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dY-LGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~ 86 (381)
|...-+.-.+++|.+.++.||+++|||.|.-. ..|.+||+|.+++.+++++ .... + ...+.++.+++++
T Consensus 8 y~~~Pi~~~~a~G~~l~D~dG~~ylD~~~g~~~~~lGh~p~i~~ai~~q~~~-~~~~---~------~~~~~~~~~~la~ 77 (375)
T PRK04260 8 YKRAAIEFVKAEGNYLIDTTGKTYLDFSSGIGVTNLGFHPQVQQALTDQAGL-IWHS---P------NLYLSSLQEEVAQ 77 (375)
T ss_pred CCCCCCCEEEEECCEEEECCCCEEEEECCCHHHHCCCCCHHHHHHHHHHHHH-CCCC---C------HHHHHHHHHHHHH
T ss_conf 8999988898574999969779999915378764027899999999999856-5698---7------4778899999998
Q ss_pred HC-CCC--CEEEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHHHHHHHHCCCC------------CEEECCCCHHH
Q ss_conf 12-888--516741660245655666---3168971004542026775266640876------------40305688147
Q gi|254780486|r 87 FF-GFE--KMLYFGSGYAANMAILST---LPQATDLIVYDKLVHASIREGINSGKAQ------------AIAIPHNNINS 148 (381)
Q Consensus 87 ~~-g~e--~al~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi~~g~~ls~a~------------~~~f~HnD~~~ 148 (381)
.+ +.. .+++++||..||.+++.. ..++..+|-.+.--|.+..-...+++.. ......||++.
T Consensus 78 ~l~~~~~~~~~f~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~ga~s~tg~~~~~~~~~~~~p~~~~~~~~d~~~ 157 (375)
T PRK04260 78 KLTGDKDYLAFFCNSGAEANEAAIKLARKATGKQEIITFQNSFHGRTFGAMSATGQDKIKQGFGDGVPHFSYAIFNDLNS 157 (375)
T ss_pred HCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCEEEECCCCHHH
T ss_conf 52366674799708678999999998765479986999778899674401220487433457788998734521045889
Q ss_pred HHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-EEEHHCCCC
Q ss_conf 899764310002478607971462157661346----899999863136089861311222347776401-100001346
Q gi|254780486|r 149 FAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL-THIIEERNN 223 (381)
Q Consensus 149 Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~-~~~~~~~~~ 223 (381)
+++...+ ....|++|.|.+..|.+.| |++++++|++||++||+||++ +| +|++|+.. ++++++.||
T Consensus 158 ~~~~~~~-------~iAAiiiEpiqg~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~-tG-fGRtG~~fa~e~~gv~PD 228 (375)
T PRK04260 158 VKALVNK-------NTAAVMLELVQGESGVLPADKAFVKALADYCQETGILLIVDEVQ-TG-IGRTGKLYAFEHYGIEPD 228 (375)
T ss_pred HHHHHCC-------CCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCC-CC-CCCCCCCCHHHCCCCCCC
T ss_conf 9986377-------83599998105889875789899999999999847625730121-17-876568655431698887
Q ss_pred CCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HH
Q ss_conf 521001346565302---67524510010000121100001357750257898878988627102247899999999-87
Q gi|254780486|r 224 VIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITD-KI 299 (381)
Q Consensus 224 ~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~-~~ 299 (381)
++ |+||++|+ | |.+++++++.+.+.....+. |-+.+|..|++++++|+++++++ +.++.++..+++. ++
T Consensus 229 iv---~~gKglg~-G~P~sav~~~~~i~~~~~~~~h~~--T~~gnpla~aaa~a~L~~i~~~~-l~~~~~~~g~~l~~~L 301 (375)
T PRK04260 229 IF---TLAKGLAN-GLPVGAMLGKSSLGGAFGYGSHGS--TFGGNKLSMAAAKATLEIMLTAG-FLETVLSKGNKLQEQL 301 (375)
T ss_pred EE---EECHHCCC-CCCEEEEEECHHHHCCCCCCCCCC--CCCCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHH
T ss_conf 89---87101048-864399998678744667878577--79989899999999999998646-9999999999999999
Q ss_pred HH--CCCCC----CCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 64--17978----9989728999589799999999999779189862288888887039996287899999999999999
Q gi|254780486|r 300 AN--KKIGF----SSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILP 373 (381)
Q Consensus 300 ~~--~~~g~----~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~ 373 (381)
.. .+.+. .+..-...+.+..+ ..++.+.++++|+++.+. +...|||.|+...|++|||+++++|+
T Consensus 302 ~~~~~~~~~i~~vRG~Gl~~gie~~~~--~~~~~~~~~~~Gll~~~~-------g~nvi~~~Ppl~it~~eid~~~~~l~ 372 (375)
T PRK04260 302 QEALQDKETVTTVRGLGYMIGIETTAD--LSQLVQAARDKGLIILTA-------GTNVIRLLPPLTISKAEIEKGIAILS 372 (375)
T ss_pred HHHHHCCCCEEEEEEEEEEEEEEECCC--HHHHHHHHHHCCCEEEEC-------CCCEEEEECCCCCCHHHHHHHHHHHH
T ss_conf 999853997376305579999995789--999999999689699407-------99989998993488999999999999
Q ss_pred HHH
Q ss_conf 998
Q gi|254780486|r 374 QII 376 (381)
Q Consensus 374 ~v~ 376 (381)
+|+
T Consensus 373 ~vF 375 (375)
T PRK04260 373 EIF 375 (375)
T ss_pred HHC
T ss_conf 869
No 89
>PRK07036 hypothetical protein; Provisional
Probab=100.00 E-value=9.6e-32 Score=218.01 Aligned_cols=342 Identities=17% Similarity=0.208 Sum_probs=224.1
Q ss_pred HHHCCCEEEECCCCEEEECCCCC---CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--C
Q ss_conf 99759839992897689803446---566779889999999999863786887224436885899999999840128--8
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSHD---YLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG--F 90 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~d---YLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g--~ 90 (381)
.+++|.|.++.||++||||.|.- -||- +||+|.+|+.++++ +.... +++..-.++...+|.++|+++.. .
T Consensus 38 ~~g~G~~l~D~dG~~ylD~~sg~~~~~lGh-~~p~v~~Ai~~Q~~-~l~~~---~~~~~~~~~~~~~lae~L~~~~p~~~ 112 (466)
T PRK07036 38 VEAEGIYVTDADGRRYLDGIGGMWCVNIGY-GREEMADAIADQAR-RLPYY---TPFGDMTNAPAAELAAKLAELAPGDL 112 (466)
T ss_pred EEEEECEEEECCCCEEEECCCCHHHHCCCC-CCHHHHHHHHHHHH-HCCCC---CCCCCCCCHHHHHHHHHHHHHCCCCC
T ss_conf 964226899699999999653478502178-97999999999997-67860---67643268999999999997488775
Q ss_pred CCEEEECCCCHHHHHHHHHH------C---CCCCCCCHHHHCCHHHHHHHHHCCCC--------------CEE----ECC
Q ss_conf 85167416602456556663------1---68971004542026775266640876--------------403----056
Q gi|254780486|r 91 EKMLYFGSGYAANMAILSTL------P---QATDLIVYDKLVHASIREGINSGKAQ--------------AIA----IPH 143 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~l------~---~~~d~ii~D~~~HaSi~~g~~ls~a~--------------~~~----f~H 143 (381)
+..++.+||..||.+++..- . ++..+|-.+..-|.+-.-...+++-. .+. |+.
T Consensus 113 ~~v~f~~SGsEA~E~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~T~~a~s~sg~~~~~~~~~~~~~~v~~~~~p~~~~~ 192 (466)
T PRK07036 113 NHVFLTTGGSTAVDSALRFVHYYFNCRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRR 192 (466)
T ss_pred CEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHECCCCCCCCCCCCCCCCCEEECCCCCCCCC
T ss_conf 87998377388999999999999875088876089834897689656562205884456787788875043257765557
Q ss_pred --C-C--------HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCC
Q ss_conf --8-8--------147899764310002478607971462157661346----899999863136089861311222347
Q gi|254780486|r 144 --N-N--------INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCG 208 (381)
Q Consensus 144 --n-D--------~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G 208 (381)
+ + .+++++.+ ....++....|++|.|....|.+.| |+++++||++||++||+||++ +| +|
T Consensus 193 p~~~~~~~~~~~~~~~~e~~i---~~~~~~~iAa~i~EPi~G~gG~~~pp~~yl~~lr~lc~~~gillI~DEV~-tG-~G 267 (466)
T PRK07036 193 PAGMSEAAFCDFLVDEFEDKI---LELGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYDILYISDEVV-TG-FG 267 (466)
T ss_pred CCCCCHHHHHHHHHHHHHHHH---HHCCCCCEEEEEECCCCCCCCEECCCHHHHHHHHHHHHHCCEEEEEECCC-CC-CC
T ss_conf 766523678999999999999---86188866899856621668713088899999999986379079974564-28-88
Q ss_pred CCCCEEE--EEHHCCCCCCCCCCCCCCCCCE---EEEEECCCCCCCCCCC-CCCC--EEC--CCCCCCCHHHHHHHHHHH
Q ss_conf 7764011--0000134652100134656530---2675245100100001-2110--000--135775025789887898
Q gi|254780486|r 209 PLGKGLT--HIIEERNNVIVMHSCSKALGSS---GALVGSNKIIYDYLIN-YAKP--FIY--TTSPSPILAVVACEALKL 278 (381)
Q Consensus 209 ~~G~G~~--~~~~~~~~~iv~~TlsKa~g~~---GG~i~~~~~ii~~l~~-~~~~--~if--st~l~P~~~aaa~aal~~ 278 (381)
++|+... +++++.|+++ ||+|++|+. -|.+++++++.+.+.. ..++ |.+ |-+.+|..|++++++|++
T Consensus 268 RtG~~fa~~~~~gv~PDiv---~~gKgl~gG~~Pl~av~~~~~i~~~~~~~~~~~~~~~hg~T~~gnpla~Aaa~a~L~~ 344 (466)
T PRK07036 268 RLGHFFASEAVFGIQPDII---TVAKGLTSGYQPLGAVIISERLVDVISGPNAKGGVFTHGFTYSGHPVACAAALKNIEI 344 (466)
T ss_pred CCCCCHHHHHHHCCCCCEE---EECCCCCCCCCCEEEEEECHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHH
T ss_conf 6755204358638898779---8713356887764899985999987504678884550367888998999999999999
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHC--CCCC----CCCCCEEEEEE-----------CCHHHHHHHHHHHHHCCEEEEEEC
Q ss_conf 862710224789999999987641--7978----99897289995-----------897999999999997791898622
Q gi|254780486|r 279 IKRKPALHKSLLQLINITDKIANK--KIGF----SSQSHIQSIVI-----------GDNKSCLNIAKNLQKKGFDIRAIR 341 (381)
Q Consensus 279 l~~~~~~~~~l~~~~~~~~~~~~~--~~g~----~~~s~I~~v~~-----------gd~~~a~~~~~~L~~~Gi~v~~i~ 341 (381)
++++. +.++.++..+++.+.... ..+. .+..-+..|.+ .+...+..+..+++++|+++.+.
T Consensus 345 l~~e~-l~~~~~~~G~~l~~~L~~L~~~p~v~dVRG~GLm~gie~v~d~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~- 422 (466)
T PRK07036 345 MEREG-LCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVECVADKGSKALLPEDIAIGQRIDRHCQERGLLVRPL- 422 (466)
T ss_pred HHHCC-HHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEC-
T ss_conf 86266-9999999999999999975159977888632389999970266544457711799999999999699499966-
Q ss_pred CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 88888887039996287899999999999999998873
Q gi|254780486|r 342 PPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 342 ~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
+ ..+|++|+...|++|||+++++|+++++|.
T Consensus 423 ------g-~~~~l~PPL~it~~eid~~l~~l~~al~ev 453 (466)
T PRK07036 423 ------E-HLCVLSPPLIITRAQIDEIVAILRAAIEET 453 (466)
T ss_pred ------C-CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf ------9-889998997689999999999999999999
No 90
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=100.00 E-value=3.1e-32 Score=221.05 Aligned_cols=342 Identities=17% Similarity=0.208 Sum_probs=219.8
Q ss_pred HHCCCEEEECCCCEEEECCCCCC---CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC--C
Q ss_conf 97598399928976898034465---667798899999999998637868872244368858999999998401288--8
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSHDY---LALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF--E 91 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~dY---LGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~--e 91 (381)
+++|.|.++.+|++||||.|.-. ||- +||+|.+++.+++.+...++ +.. -+++.-.+|.++|.+++.. .
T Consensus 41 rg~G~~l~D~dG~~yLD~~sg~~~~~lGH-~~p~v~~Ai~~ql~~~~~~~--~~~---~~~~~~~~lae~L~~~~p~~~~ 114 (454)
T PRK06931 41 KAQGCWVTDVEGNEYLDCLAGAGTLALGH-NHPAVMQSIQDVLDSGLPLH--TLD---LTTPLKDAFSEELLSFLPGEKD 114 (454)
T ss_pred EEECCEEEECCCCEEEEECCCHHHHHHCC-CCHHHHHHHHHHHHHCCCCE--ECC---CCCHHHHHHHHHHHHHCCCCCC
T ss_conf 83648899798899989163177554617-95999999999986288711--277---6867999999999984776567
Q ss_pred CE-E-EE-CCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHHHHHHHHCC--------------CCCEEECCC-------
Q ss_conf 51-6-74-1660245655666---31689710045420267752666408--------------764030568-------
Q gi|254780486|r 92 KM-L-YF-GSGYAANMAILST---LPQATDLIVYDKLVHASIREGINSGK--------------AQAIAIPHN------- 144 (381)
Q Consensus 92 ~a-l-~~-~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi~~g~~ls~--------------a~~~~f~Hn------- 144 (381)
.. . +| +||..||.+++.. ..++..+|-.+..-|..-.-..-+++ .+.++|+|.
T Consensus 115 ~~~~~F~~~SGSEAvE~AlKlAr~~tgR~~iis~~~sYHG~T~gals~tg~~~~~~~~~~l~p~~~~~p~p~~~r~p~~~ 194 (454)
T PRK06931 115 EYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALSLTGNLSAKNAVNGLMPGVQFMPYPHEYRCPLGI 194 (454)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCC
T ss_conf 24899738974899999999987606998199980688997433531107965222568889996680797523576677
Q ss_pred ----CHHHHHHHHHHHH---HCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCE
Q ss_conf ----8147899764310---002478607971462157661346----89999986313608986131122234777640
Q gi|254780486|r 145 ----NINSFAENINKWR---KSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKG 213 (381)
Q Consensus 145 ----D~~~Le~~l~~~~---~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G 213 (381)
+.+++++.+++.. .........|++|.|.+..|.+.| +++++++|++||++||+||++ +| +|++|..
T Consensus 195 ~~~~~~~~~~~~~~~~i~~~~~~~~~~AAviiEPiqg~gG~~~~p~~yl~~lr~lc~~~gillI~DEV~-tG-fGRTG~~ 272 (454)
T PRK06931 195 GGEAGVKALTYYFENFIEDVESGVVKPAAVILEAIQGEGGVVPAPVSWLQKIREVTQKHGILLIVDEVQ-AG-FARSGKM 272 (454)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCC-CC-CCCCCCC
T ss_conf 623369999999999999997068872599994766888976188899889998751168189950344-37-7867784
Q ss_pred E-EEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 1-100001346521001346565302---675245100100001211000013577502578988789886271022478
Q gi|254780486|r 214 L-THIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSL 289 (381)
Q Consensus 214 ~-~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l 289 (381)
. .+++++.||++ ||+|++|+ | |.++.++. ++..... .+.+|-+.+|..|++++++|+++++++ +.++.
T Consensus 273 fa~e~~gv~PDIi---~~gKglgg-G~P~a~~~~~~~-~~~~~~~--~h~~T~~Gnpla~Aaala~L~~i~~e~-l~~~~ 344 (454)
T PRK06931 273 FAFEHAGIEPDIV---VMSKAVGG-GLPLAVLGIKKE-FDAWQPA--GHTGTFRGNQLAMATGLATLKILRDEN-LAQNA 344 (454)
T ss_pred CHHCCCCCCCCEE---EEHHHHCC-CCCEEEEEEHHH-HCCCCCC--CCCCCCCCCHHHHHHHHHHHHHHHHCC-HHHHH
T ss_conf 1210258898960---02153248-885489987555-5246788--866456898478899999999998624-99999
Q ss_pred HHHHHHHHH-HHH--CCCC----CCCCCCEEEEEE--------------CCHHHHHHHHHHHHHCCEEEEEECCCCCCCC
Q ss_conf 999999998-764--1797----899897289995--------------8979999999999977918986228888888
Q gi|254780486|r 290 LQLINITDK-IAN--KKIG----FSSQSHIQSIVI--------------GDNKSCLNIAKNLQKKGFDIRAIRPPTVPIN 348 (381)
Q Consensus 290 ~~~~~~~~~-~~~--~~~g----~~~~s~I~~v~~--------------gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~ 348 (381)
++..+++.+ +.. ...+ +.+..-...|.+ .|...+..+.+.++++|+++.+.. .+
T Consensus 345 ~~~G~~l~~~L~~l~~~~p~V~dVRG~GL~~giElv~~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~g-----~~ 419 (454)
T PRK06931 345 QERGEWLTAALRELSKEYPCIGNVRGRGLMIGIEIVDERKPADATGSYPADGELAAAIQKACFNNKLLLERGG-----RN 419 (454)
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECC-----CC
T ss_conf 9999999999999987099888631374489999800676432235566668999999999997896895468-----99
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 7039996287899999999999999998873
Q gi|254780486|r 349 TARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 349 ~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
...|||.|+...|++||++++++|+++++|-
T Consensus 420 ~nvlr~~PPL~it~~eid~~l~~l~~al~e~ 450 (454)
T PRK06931 420 GNVVRLLCPLNITQAECEEFIKRFKQAVAEA 450 (454)
T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 9989997990168999999999999999999
No 91
>PRK07046 aminotransferase; Validated
Probab=100.00 E-value=7.5e-32 Score=218.68 Aligned_cols=332 Identities=13% Similarity=0.150 Sum_probs=220.1
Q ss_pred HHCCCEEEECCCCEEEECCCCCC---CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCE
Q ss_conf 97598399928976898034465---667798899999999998637868872244368858999999998401288851
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSHDY---LALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKM 93 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~dY---LGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~a 93 (381)
+++|.+.+..||++||||++... ||- +||+|.+|+.+++++ |.+. ...++...++.++|++.++.+..
T Consensus 62 ~a~G~~l~D~DG~~YiD~~~g~~~~~lGH-~~p~v~~Av~~q~~~--g~~~------~~~~~~~~~lae~l~~~~~~~~~ 132 (452)
T PRK07046 62 EARGARFTDVDGHRYVDFCLGDTGAMFGH-SPAPVARALAEQARR--GLTT------MLPSEDAAWVGEELARRFGLPYW 132 (452)
T ss_pred EEEECEEEECCCCEEEECCHHHHHCCCCC-CCHHHHHHHHHHHHH--CCCC------CCCCHHHHHHHHHHHHHHCCCEE
T ss_conf 74518899698999988561155121577-999999999999872--5545------57857999999998987388617
Q ss_pred EEECCCCHHHHHHHH---HHCCCCCCCCHHHHCCHHHHHH-HHHCC-----------------CCCEEECCCCHHHHHHH
Q ss_conf 674166024565566---6316897100454202677526-66408-----------------76403056881478997
Q gi|254780486|r 94 LYFGSGYAANMAILS---TLPQATDLIVYDKLVHASIREG-INSGK-----------------AQAIAIPHNNINSFAEN 152 (381)
Q Consensus 94 l~~~sG~~An~~~i~---~l~~~~d~ii~D~~~HaSi~~g-~~ls~-----------------a~~~~f~HnD~~~Le~~ 152 (381)
.+++||..||..++. +.+++..+|..+-..|.+.-.. +.+.. .....++.||++.+|+.
T Consensus 133 ~f~~sGsEA~~~AirlAR~~TgR~~Ii~f~g~YHG~~d~~~~~~~~g~~~~~~~~~g~~~~~~~~~~~~~~nd~~~le~~ 212 (452)
T PRK07046 133 QVATTASDANRFVLRWARAATGRKKILVFNGCYHGTVDDVFVDLADGRPVQRPGLLGQVHDLTATTRVVEFNDLAALEAA 212 (452)
T ss_pred EEECCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCHHHHHHH
T ss_conf 75377999999999998645499769996367678605789864799866789888988776776430166878999997
Q ss_pred HHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCC
Q ss_conf 64310002478607971462157661346----89999986313608986131122234777640110000134652100
Q gi|254780486|r 153 INKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMH 228 (381)
Q Consensus 153 l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~ 228 (381)
+.. .....|++|.|.+..|-+.| |+++++||++||++||+||++. +..|.. |.++.+|+.||++
T Consensus 213 l~~------~~iAAvi~EPi~g~~G~i~p~~~fl~~lrelc~~~giLLI~DEV~T-~r~g~G--g~~~~~Gv~PDl~--- 280 (452)
T PRK07046 213 LAD------GDVACVLAEPAMTNIGMVLPEPGFWEALRELTRRHGTLLVIDETHT-ISSGPG--GYTRAHGLEPDFL--- 280 (452)
T ss_pred HCC------CCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCC-CCCCCC--HHHHHHCCCCCEE---
T ss_conf 178------9867999976886788757999999999999975897999936661-001685--3879868796667---
Q ss_pred CCCCCCCC--EEEEEECCCCCCCCCCCC----CCCEE---CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH-HH
Q ss_conf 13465653--026752451001000012----11000---0135775025789887898862710224789999999-98
Q gi|254780486|r 229 SCSKALGS--SGALVGSNKIIYDYLINY----AKPFI---YTTSPSPILAVVACEALKLIKRKPALHKSLLQLINIT-DK 298 (381)
Q Consensus 229 TlsKa~g~--~GG~i~~~~~ii~~l~~~----~~~~i---fst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~-~~ 298 (381)
||+|++|+ ..|.+.+++++.+.+... ..++. .|-+.+|..|+|++++|++++++. ..+++.++..++ ++
T Consensus 281 t~gK~iggG~P~ga~~~~~~i~~~~~~~~~~~~~g~~~~ggTf~gnpla~AAa~A~L~~l~~~~-~~~~~~~~g~~L~~g 359 (452)
T PRK07046 281 VVGKPIAGGVPCAVYGFSAALAERARAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTDA-AYAHMFALAARLAAG 359 (452)
T ss_pred EEHHHHCCCCCEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC-HHHHHHHHHHHHHHH
T ss_conf 6444312888634340259999888752145678756878887879899999999999995552-999999999999999
Q ss_pred HH--HCCCCCC----CCCCEEEEEE-C-------------CHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCC
Q ss_conf 76--4179789----9897289995-8-------------9799999999999779189862288888887039996287
Q gi|254780486|r 299 IA--NKKIGFS----SQSHIQSIVI-G-------------DNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITL 358 (381)
Q Consensus 299 ~~--~~~~g~~----~~s~I~~v~~-g-------------d~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a 358 (381)
+. ....+++ .......+.+ . |......+...|+++||++.|. + ..+.+++
T Consensus 360 L~~~~~~~~~~~~v~g~G~~~~~~f~~~~~~~~~~~~~~~d~~~~~~~~~~ll~rGVll~p~-------~-n~~~~sp-- 429 (452)
T PRK07046 360 LRATIARHGLPWHVTRIGARVEFQFAPTPPRNGAEAGAALDGELEHALHLYLLNRGVLITPF-------H-NMMLVCP-- 429 (452)
T ss_pred HHHHHHHCCCCEEEEEECCEEEEEEECCCCCCHHHHHHCCCHHHHHHHHHHHHHCCEEECCC-------C-CCEEECC--
T ss_conf 99999867997599755746899960788756788874433999999999999799558876-------7-5477864--
Q ss_pred CCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 8999999999999999988738
Q gi|254780486|r 359 NVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 359 ~~t~edi~~~~~~l~~v~~E~~ 380 (381)
.||+||||+++++++++++|+-
T Consensus 430 ~~T~edID~~v~a~~~al~el~ 451 (452)
T PRK07046 430 QTTAEDVDRLVAAFDACLGELL 451 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHH
T ss_conf 4899999999999999999850
No 92
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=100.00 E-value=6.3e-32 Score=219.17 Aligned_cols=327 Identities=12% Similarity=0.149 Sum_probs=212.6
Q ss_pred HHCCCEEEECCCCEEEECCCCC-CCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH-CCCCCE
Q ss_conf 9759839992897689803446-56677-98899999999998637868872244368858999999998401-288851
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSHD-YLALS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADF-FGFEKM 93 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~d-YLGl~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~-~g~e~a 93 (381)
+++|.|.++.||++||||.+.- -+.|. +||+|.+|+.+++++ +... +..+....++-++|++. -+.+.+
T Consensus 36 rg~G~~l~D~dG~~YlD~~~g~~~~~lGH~~p~i~~Ai~~Ql~~--~~~~------~~~~~~~~~~ae~l~~~~p~~~~v 107 (431)
T PRK06209 36 RGKGAHVWDVDGNEYIEYGMGLRAVGLGHAYPPVVEAVREALQD--GCNF------TRPSAIELDAAELFLDLIDGAEMV 107 (431)
T ss_pred EEECCEEEECCCCEEEECCHHHHHHHHCCCCHHHHHHHHHHHHH--CCCC------CCCCHHHHHHHHHHHHHCCCCCEE
T ss_conf 64339899798799998466499897737969999999999975--2655------476589999999999758986569
Q ss_pred EEECCCCHHHHHHHHH---HCCCCCCCCHHHH--------CCHH--HHHHHHH-CCCCCEEECCCCHHHHHHHHHHHHHC
Q ss_conf 6741660245655666---3168971004542--------0267--7526664-08764030568814789976431000
Q gi|254780486|r 94 LYFGSGYAANMAILST---LPQATDLIVYDKL--------VHAS--IREGINS-GKAQAIAIPHNNINSFAENINKWRKS 159 (381)
Q Consensus 94 l~~~sG~~An~~~i~~---l~~~~d~ii~D~~--------~HaS--i~~g~~l-s~a~~~~f~HnD~~~Le~~l~~~~~~ 159 (381)
.+++||..||.+++.. ..++.-++.+-.. .|.+ +-.|+.. .......|+.||+++|++.+++.
T Consensus 108 ~F~nSGsEA~e~AlklAR~~tgr~~i~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~y~d~~~le~~~~~~--- 184 (431)
T PRK06209 108 KFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTKTFRYNDIASLEALFEDY--- 184 (431)
T ss_pred EECCCCCHHHHHHHHHHHHHHCCCEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHC---
T ss_conf 87278837899999999997599537770577556435665578765578887545666564765599999987645---
Q ss_pred CCCCCCEEEECCCCCCCCCHHH---HHHHHHHHHHCCEEEEECCCCCCCCCCCCCC-EEEEEHHCCCCCCCCCCCCCCCC
Q ss_conf 2478607971462157661346---8999998631360898613112223477764-01100001346521001346565
Q gi|254780486|r 160 GGKGFPWIVVESIYSMDGDKAP---LDDLVKIANDYDGFIVVDEAHATGVCGPLGK-GLTHIIEERNNVIVMHSCSKALG 235 (381)
Q Consensus 160 ~~~~~~~vv~egv~Sm~G~~ap---L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~-G~~~~~~~~~~~iv~~TlsKa~g 235 (381)
+.....|++|.|-+ ..+| |+++++||++||++||+||++ +|+ ++|. |.++++++.||++ ||+|++|
T Consensus 185 -~~~iAAvIvEPi~g---~~p~~~fl~~lr~lc~~~giLLI~DEV~-TGf--R~g~~~a~~~~gv~PDi~---t~gK~ig 254 (431)
T PRK06209 185 -PGRIACVILEPATA---DEPQDNFLHEVQRLCHENGALFILDEMI-TGF--RWHMRGAQKLYGIVPDLS---CFGKAMG 254 (431)
T ss_pred -CCCEEEEEEECCCC---CCCCHHHHHHHHHHHHHCCCEEEECCCC-CCC--CCCCCCHHHHCCCCCCEE---EEHHHHH
T ss_conf -56667888503137---7897899999999998729079970560-266--167522766208998799---8701322
Q ss_pred CEE---EEEECCCCCCCCCC--CCC--CCEECC--CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH-HH--HCC
Q ss_conf 302---67524510010000--121--100001--3577502578988789886271022478999999998-76--417
Q gi|254780486|r 236 SSG---ALVGSNKIIYDYLI--NYA--KPFIYT--TSPSPILAVVACEALKLIKRKPALHKSLLQLINITDK-IA--NKK 303 (381)
Q Consensus 236 ~~G---G~i~~~~~ii~~l~--~~~--~~~ifs--t~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~-~~--~~~ 303 (381)
+ | |.+++++++++..- ..+ +.|.++ -+.+|..++|++++|+++++++ +.+++++..+++.+ +. ..+
T Consensus 255 g-G~Pi~Av~g~~eim~~~~~~~~~~~~~f~~~~T~~g~p~~~AAalatL~~~~~~~-l~~~~~~~G~~L~~~l~~l~~~ 332 (431)
T PRK06209 255 N-GFSISALAGKREYMELGGLEHTDFERVFLLSTTHGAETHALAAAIATMAIYREED-VIERLWEQGAKLAAGVNEAAAE 332 (431)
T ss_pred C-CCCCEEEEEHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8-8880577786997640355567866541104577888799999999999998544-9999999999999999999976
Q ss_pred CCCC----C-CCCEEEEEE-C------CHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf 9789----9-897289995-8------97999999999997791898622888888870399962878999999999999
Q gi|254780486|r 304 IGFS----S-QSHIQSIVI-G------DNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDI 371 (381)
Q Consensus 304 ~g~~----~-~s~I~~v~~-g------d~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~ 371 (381)
.++. . ..++.+.+. . +......+.++|+++||+..+ +.++..||++|||+++++
T Consensus 333 ~~~~~~vr~~G~~~~~~f~~~~~~~~~~~~~~~~~~~~ml~~Gvl~~~--------------~~iS~aHt~~di~~~l~a 398 (431)
T PRK06209 333 HGLQDHVRVSGRPCCLTYSTLDGNGQPSQAFRTLFLQEMIRRGVLMPS--------------LVVSYAHGDADIERTIDA 398 (431)
T ss_pred CCCCEEEEEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCEEHHH--------------HHHHHCCCHHHHHHHHHH
T ss_conf 799779976401337899324455687699999999999958975124--------------776053399999999999
Q ss_pred HHHHHHHHC
Q ss_conf 999988738
Q gi|254780486|r 372 LPQIISEGN 380 (381)
Q Consensus 372 l~~v~~E~~ 380 (381)
++++++++.
T Consensus 399 ~~~al~~l~ 407 (431)
T PRK06209 399 VHGALGVYR 407 (431)
T ss_pred HHHHHHHHH
T ss_conf 999999999
No 93
>PRK08555 consensus
Probab=100.00 E-value=5.7e-31 Score=213.21 Aligned_cols=339 Identities=18% Similarity=0.209 Sum_probs=220.6
Q ss_pred HHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC---
Q ss_conf 975983999289768980344---65667798899999999998637868872244368858999999998401288---
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF--- 90 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~--- 90 (381)
+++|.|.+..||++||||.|. .-||- +||+|.+|+.++++ +... .++++. .++...+|.++|+++...
T Consensus 40 ra~G~~l~D~dG~~ylD~~~g~~~~~lGh-~~p~i~~Ai~~ql~-~l~~-~~~~~~---~~~~~~~lae~L~~~~p~~~~ 113 (443)
T PRK08555 40 RGEGVYVYDVDGNVYLDFSSGIGVNNLGH-SHPRVIEAVEEQLH-KLWH-AAGTDF---YNEYQVELAKKLVEIAPGDFE 113 (443)
T ss_pred EEECCEEEECCCCEEEEECCCHHHHHHCC-CCHHHHHHHHHHHH-HCCC-CCCCCC---CCHHHHHHHHHHHHHCCCCCC
T ss_conf 84659999798899999053276421248-97999999999986-1767-465643---688999999999985775656
Q ss_pred CCEEEECCCCHHHHHHHHH---HCCCCCCCCHHHHCCHHHHHHHHHC---------------CCCCEEEC----C-----
Q ss_conf 8516741660245655666---3168971004542026775266640---------------87640305----6-----
Q gi|254780486|r 91 EKMLYFGSGYAANMAILST---LPQATDLIVYDKLVHASIREGINSG---------------KAQAIAIP----H----- 143 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~---l~~~~d~ii~D~~~HaSi~~g~~ls---------------~a~~~~f~----H----- 143 (381)
..+++.+||..||..++.. ..++.-+|-.+..-|.+-.-..-++ +...++|+ +
T Consensus 114 ~~v~f~~SGSEAvE~AiklAr~~tgr~~ii~~~~~yHG~t~g~~s~t~~~~~~~~~~~p~~~~~~~vp~p~~~r~p~~~~ 193 (443)
T PRK08555 114 KKVFFSNSGTEANEAALKIAKWYTGRKMFIAFIGAFHGRTQGSLSLTASKPVQRSGFFPTMPGVEHVPYPNPYRNPWGID 193 (443)
T ss_pred CEEEEECCHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCEEEECCCCHHCCCCCCCCCCCEEECCCCCCCCCCCCC
T ss_conf 55998087788999999998873799889999587078972116872585011047789999936816886224644566
Q ss_pred --CCHHHHHH-H---HHHHH---HCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCC
Q ss_conf --88147899-7---64310---002478607971462157661346----89999986313608986131122234777
Q gi|254780486|r 144 --NNINSFAE-N---INKWR---KSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPL 210 (381)
Q Consensus 144 --nD~~~Le~-~---l~~~~---~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~ 210 (381)
.+.+++.+ . +++.. ...++....|++|.|.+..|.+.| +++++++|++||++||+||++ +| +|++
T Consensus 194 ~~~~~~~~~~~~~~~ie~~i~~~~~~~~~iAavi~EPi~g~gG~~~pp~~yl~~l~~lc~~~gillI~DEV~-tG-fGRt 271 (443)
T PRK08555 194 GYENPDELVNRVIDYIEEYLFEHYVPPEEVAGIFFEPIQGEGGYVVPPKNFFKELKKLADKYGILLIDDEVQ-MG-LGRT 271 (443)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCCC-CC-CCCC
T ss_conf 656999999999999999998625798988999995876888987588788789999999749469635441-27-8702
Q ss_pred CCE-EEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHH
Q ss_conf 640-1100001346521001346565302---675245100100001211000013577502578988789886271022
Q gi|254780486|r 211 GKG-LTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALH 286 (381)
Q Consensus 211 G~G-~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~ 286 (381)
|.. ..+++++.|+++ ||+|++|+ | |.+++++++ +.-.. ..+-.|-+.+|..|++++++|+++++ .+.
T Consensus 272 G~~fa~e~~gv~PDiv---~~gKgl~~-G~Pl~av~~~~e~-~~~~~--~~h~~T~~gnpla~aaa~a~L~~i~e--~l~ 342 (443)
T PRK08555 272 GKMFAIEHFGVEPDII---TLAKALGG-GIPIGATIFRADL-DFKKP--GLHSNTFGGNALASAAGLAVIEEIKE--GLL 342 (443)
T ss_pred CCCCEECCCCCCCCEE---EECCCCCC-CCCEEEEEEHHHH-CCCCC--CCCCCCCCCCHHHHHHHHHHHHHHHH--HHH
T ss_conf 4741231688899889---97742448-8750899982453-55777--77376888548999999999999997--799
Q ss_pred HHHHHHHHHHHH-HHHC--CCC----CCCCCCEEEEEE--------CCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCE
Q ss_conf 478999999998-7641--797----899897289995--------8979999999999977918986228888888703
Q gi|254780486|r 287 KSLLQLINITDK-IANK--KIG----FSSQSHIQSIVI--------GDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTAR 351 (381)
Q Consensus 287 ~~l~~~~~~~~~-~~~~--~~g----~~~~s~I~~v~~--------gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~r 351 (381)
++.++..+++.+ +... +.. +.+..-+..|.+ ++...+.++...++++|+++.+. +...
T Consensus 343 ~~~~~~g~~l~~~L~~l~~~~~~v~dvRG~Gl~~gielv~~~~~~~~~~~~~~~i~~~~~~~Gll~~~~-------g~n~ 415 (443)
T PRK08555 343 ENVQKLGKYFRERLEELKEKYEIIGDVRGLGLAWAIEFVKDRKTKEPNPKLRDRVVVEAFKRGLILLGC-------GKSA 415 (443)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEC-------CCCE
T ss_conf 999999999999999988619977872326679999982377656779899999999999789099737-------9998
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9996287899999999999999998873
Q gi|254780486|r 352 LRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 352 lRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
|||.|+...|++||+.++++|+++++|.
T Consensus 416 ir~~PPL~it~~eid~~~~~l~~al~~V 443 (443)
T PRK08555 416 IRLIPPLIISEEEAKIGLEILEEAIKVV 443 (443)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHC
T ss_conf 9997794388999999999999999639
No 94
>PRK08297 L-lysine aminotransferase; Provisional
Probab=100.00 E-value=2.9e-31 Score=215.01 Aligned_cols=341 Identities=13% Similarity=0.149 Sum_probs=214.6
Q ss_pred HHHCCCEEEEC-CCCEEEECCCCC-CCCCC-CCHHHHHHH--HHHHHHHCCCC-CCCCCCCCCCCHHHHHHHHHHHHHC-
Q ss_conf 99759839992-897689803446-56677-988999999--99998637868-8722443688589999999984012-
Q gi|254780486|r 16 IKSKGRHRQLL-RRQDIWDFTSHD-YLALS-SSTLLREKI--LSSLDSKIPIG-SGGSRLLCGNYNQHLELEEEAADFF- 88 (381)
Q Consensus 16 ~~~~g~~~~~~-~~~~~l~f~s~d-YLGl~-~~p~v~~a~--~~a~~~~~g~~-~~~sr~~~G~~~~~~~lE~~lA~~~- 88 (381)
-|++|.|..+. ||++||||.|.- ...|. +||+|+++. ++.+.. .... .+.+... +....++-+++++..
T Consensus 40 ergeG~yl~D~~DG~~YLD~~sg~~~~~lGH~hP~iv~a~~~~~~~~~-~~~~~~~~~~~~---~~~~~~l~~~l~~~~~ 115 (449)
T PRK08297 40 ERSRGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELAQ-AALNKPSNSDVY---TVAMARFVDTFARVLG 115 (449)
T ss_pred EEEECCEEEECCCCCEEEECHHHHHHHHHHCCCHHHHHHHHHHHHHHH-HHHHCCCCCHHH---HHHHHHHHHHHHHHHC
T ss_conf 851539999999998865722529988884798999987999999999-987364652366---6999999999998618
Q ss_pred --CCCCEEEECCCCHHHHHHHHHH---CCC------------CCCCCHHHHCCHHHHHHHHHCCC---CCE---------
Q ss_conf --8885167416602456556663---168------------97100454202677526664087---640---------
Q gi|254780486|r 89 --GFEKMLYFGSGYAANMAILSTL---PQA------------TDLIVYDKLVHASIREGINSGKA---QAI--------- 139 (381)
Q Consensus 89 --g~e~al~~~sG~~An~~~i~~l---~~~------------~d~ii~D~~~HaSi~~g~~ls~a---~~~--------- 139 (381)
+.+.+++++||..||.+++..- .++ .-+|-.+..-|..-.-++-+++. +..
T Consensus 116 ~~~l~~vff~nsGSEAvE~AlKlA~~~~~r~~~~~g~~~~~~~kii~~~~sYHG~T~gals~tg~~~~~~~~~p~~~~~~ 195 (449)
T PRK08297 116 DPALPHLFFVDGGALAVENALKVAFDWKSRHNEAHGIDPALGTRVLHLRGAFHGRSGYTLSLTNTDPVKTARFPKFDWPR 195 (449)
T ss_pred CCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCC
T ss_conf 87777588618768999999999999865430023677767756999636537960777886179853357888888877
Q ss_pred -EECC-------C--------CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEEC
Q ss_conf -3056-------8--------8147899764310002478607971462157661346----899999863136089861
Q gi|254780486|r 140 -AIPH-------N--------NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVD 199 (381)
Q Consensus 140 -~f~H-------n--------D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivD 199 (381)
..++ . +++++++.+. ..++....|++|.|-+-.|.+.| |++++++|++||++||+|
T Consensus 196 ~~~P~~~~~~~~~~~~~~~~~~l~~l~~~i~----~~~~~iAAvIvEPIqG~gG~~~~p~~yl~~lr~lc~~~giLLI~D 271 (449)
T PRK08297 196 IDAPYVRPGLDADAVAALEAEALRQARAAFE----AHPHDIACFIAEPIQGEGGDRHFRPEFFAAMRALCDEHDALLIFD 271 (449)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH----HCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEECC
T ss_conf 8899877898730166789999999999998----589977999996787477998899899999999999718845445
Q ss_pred CCCCCCCCCCCCCE-EEEEHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC--CCCCEEC-CCCCCCCHHHHHHHH
Q ss_conf 31122234777640-1100001346521001346565302675245100100001--2110000-135775025789887
Q gi|254780486|r 200 EAHATGVCGPLGKG-LTHIIEERNNVIVMHSCSKALGSSGALVGSNKIIYDYLIN--YAKPFIY-TTSPSPILAVVACEA 275 (381)
Q Consensus 200 Eah~~Gv~G~~G~G-~~~~~~~~~~~iv~~TlsKa~g~~GG~i~~~~~ii~~l~~--~~~~~if-st~l~P~~~aaa~aa 275 (381)
|++ +| +|++|+. .++++++.||++ ||+|+++. ||.+++ ..+.+...+ ..++... |-+.+|..|++++++
T Consensus 272 EVq-tG-fGRTG~~fa~e~~gv~PDii---t~~Kgl~~-G~~~~~-~~~~~~~~~~~~~~~~~~sTf~Gnp~acaaala~ 344 (449)
T PRK08297 272 EVQ-TG-CGLTGTAWAYQQLGVAPDVV---AFGKKTQV-CGVMAG-RRVDEVADNVFAVSSRINSTWGGNLTDMVRARRI 344 (449)
T ss_pred CCE-EC-CCCCCCHHHCCCCCCCCCEE---EECCCCCC-CCHHHH-HHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 220-27-87676513313358999889---87763345-507788-9999999886416877788889888999999999
Q ss_pred HHHHHHCCCHHHHHHHHHHHHH----HHHHCC--C--CCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCC
Q ss_conf 8988627102247899999999----876417--9--7899897289995897999999999997791898622888888
Q gi|254780486|r 276 LKLIKRKPALHKSLLQLINITD----KIANKK--I--GFSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPI 347 (381)
Q Consensus 276 l~~l~~~~~~~~~l~~~~~~~~----~~~~~~--~--g~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~ 347 (381)
|++++++. +.++.++...++. ++..+. + .+.+..-+..|.+.++....++.++++++|+++.+.
T Consensus 345 L~ii~~e~-l~~~~~~~g~~l~~~L~~l~~~~p~ii~dVRG~GLm~giel~~~~~~~~~~~~~~~~Gll~~~~------- 416 (449)
T PRK08297 345 LEVIEAEG-LFDRARQQGAYLLARLDELAAEFPAVVLDPRGRGLMCAFSLPTTADRDELIRRLWRERVILLPA------- 416 (449)
T ss_pred HHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCHHHHHHHHHHHHHCCCEEEEC-------
T ss_conf 99984304-9999999999999999999976898446531156899998288678999999999789589757-------
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 87039996287899999999999999998873
Q gi|254780486|r 348 NTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 348 ~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
+...|||+|+...|++|||+++++|+++++|+
T Consensus 417 g~~~irl~PPL~it~~eid~~~~~l~~al~el 448 (449)
T PRK08297 417 GEDSVRFRPALTVSRAEIDAAVDAVRRVLRTL 448 (449)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 99979998991288999999999999999986
No 95
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=100.00 E-value=2.4e-31 Score=215.54 Aligned_cols=343 Identities=13% Similarity=0.164 Sum_probs=212.3
Q ss_pred HHHHHHCCCEEEEC-CCCEEEECCCC---CCCCCCCCHHHHHHHHHHHH-HHCCCCC-CCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99999759839992-89768980344---65667798899999999998-6378688-7224436885899999999840
Q gi|254780486|r 13 LQKIKSKGRHRQLL-RRQDIWDFTSH---DYLALSSSTLLREKILSSLD-SKIPIGS-GGSRLLCGNYNQHLELEEEAAD 86 (381)
Q Consensus 13 l~~~~~~g~~~~~~-~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~-~~~g~~~-~~sr~~~G~~~~~~~lE~~lA~ 86 (381)
++--|++|.|.++. ||++||||.|. .-||- +||+|+++.....+ .++.+.. ..+... +....++-+++++
T Consensus 21 i~i~rgeG~~l~D~~dG~~yLD~~~g~~~~~lGh-~hp~iv~a~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~l~~ 96 (431)
T TIGR03251 21 LDLDRSRGSVLVDARDGRRYLDMFSFFASMALGM-NHPALVDDLAFRARLGAAAVNKPSNSDVY---TVAMARFVDTFAR 96 (431)
T ss_pred EEEEEEECCEEEECCCCCEEEECCHHHHHHHHCC-CCHHHHHHHHHHHHHHHHHHCCCCCCHHH---HHHHHHHHHHHHH
T ss_conf 0688602699998999988417014199887707-97999999999999988765385662255---6999999999998
Q ss_pred HC---CCCCEEEECCCCHHHHHHHHHH---CCC-----------CC-CCCHHHHCCHHHHHHHHHCCCC-----------
Q ss_conf 12---8885167416602456556663---168-----------97-1004542026775266640876-----------
Q gi|254780486|r 87 FF---GFEKMLYFGSGYAANMAILSTL---PQA-----------TD-LIVYDKLVHASIREGINSGKAQ----------- 137 (381)
Q Consensus 87 ~~---g~e~al~~~sG~~An~~~i~~l---~~~-----------~d-~ii~D~~~HaSi~~g~~ls~a~----------- 137 (381)
.+ +.+.+++++||..||.+++..- ..+ +. +|-.+..-|..-.-++-+++..
T Consensus 97 ~~~~~~l~~v~f~~sGsEAvE~AiKlA~~y~~r~~~~~~~~~~~~~kiis~~~syHG~T~gals~t~~~~~~~~~~p~~~ 176 (431)
T TIGR03251 97 VLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFD 176 (431)
T ss_pred HCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCEECCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 50887778589758679999999999999976431234557777647999725365996333344368753357788778
Q ss_pred -------CEEECCC--C--------HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEE
Q ss_conf -------4030568--8--------147899764310002478607971462157661346----899999863136089
Q gi|254780486|r 138 -------AIAIPHN--N--------INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFI 196 (381)
Q Consensus 138 -------~~~f~Hn--D--------~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~L 196 (381)
...++.+ + .++|+. ++......++....|++|.|.+-.|.+.| |+++++||++||++|
T Consensus 177 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~iAAvI~EPIqG~gG~~~~p~~yl~~lr~lc~~~giLL 255 (431)
T TIGR03251 177 WPRIDNPKLTFPLDAPNLDQVIALEEEALRQ-ARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRAMRALCDEHDALL 255 (431)
T ss_pred CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH-HHHHHHHCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCEE
T ss_conf 7777798876888876500255568999999-999997389957999967776777985689899999999987627505
Q ss_pred EECCCCCCCCCCCCCCEE-EEEHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCC-C-CCCEECCC-CCCCCHHHHH
Q ss_conf 861311222347776401-100001346521001346565302675245100100001-2-11000013-5775025789
Q gi|254780486|r 197 VVDEAHATGVCGPLGKGL-THIIEERNNVIVMHSCSKALGSSGALVGSNKIIYDYLIN-Y-AKPFIYTT-SPSPILAVVA 272 (381)
Q Consensus 197 ivDEah~~Gv~G~~G~G~-~~~~~~~~~~iv~~TlsKa~g~~GG~i~~~~~ii~~l~~-~-~~~~ifst-~l~P~~~aaa 272 (381)
|+||++ +| +|++|... .+++++.||++ ||+|+++ .||.+++. .+.+...+ . .++...+| +.+|..|+++
T Consensus 256 I~DEVq-tG-fGRtG~~fa~e~~gv~PDiv---~~gKgl~-~g~~~~~~-~~~~~~~~~~~~~~~~~sT~~gnpla~aaa 328 (431)
T TIGR03251 256 IFDEVQ-TG-VGLTGTAWAYQQLGVQPDIV---AFGKKTQ-VCGIMAGR-RVDEVADNVFAVPSRLNSTWGGNLVDMVRA 328 (431)
T ss_pred ECCCCE-EC-CCCCCCCHHHHHCCCCCCEE---EECCCCC-CCHHHHHH-HHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
T ss_conf 534101-36-77667744677507889989---8777223-55188899-999999986417877678888898999999
Q ss_pred HHHHHHHHHCCCHHHHHHHHHHHHH----HHHHCC---C-CCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCC
Q ss_conf 8878988627102247899999999----876417---9-7899897289995897999999999997791898622888
Q gi|254780486|r 273 CEALKLIKRKPALHKSLLQLINITD----KIANKK---I-GFSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPT 344 (381)
Q Consensus 273 ~aal~~l~~~~~~~~~l~~~~~~~~----~~~~~~---~-g~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~Pt 344 (381)
+++|++++++. +.++.++...++. ++..+. + .+.+..-+..|.+.++..+.++.++++++|+++.+
T Consensus 329 la~l~ii~~e~-l~~~v~~~g~~l~~~L~~l~~~~p~~V~dVRG~GLm~giel~~~~~~~~~~~~~~~~Gll~~~----- 402 (431)
T TIGR03251 329 TRILEIIEEER-LVDNARVQGAHLLARLHELAAEFPHLVSNPRGRGLMCAFDLPSTADRDEVIRQLYREGVLLLG----- 402 (431)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCEEEEEECCCHHHHHHHHHHHHHCCCEEEE-----
T ss_conf 98899986246-999999999999999999987687824563013369999818816799999999978939974-----
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 8888703999628789999999999999999
Q gi|254780486|r 345 VPINTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 345 Vp~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
.+...|||.|+...|++|||+++++|++|
T Consensus 403 --~g~~~ir~~PPL~it~~eid~~~~~l~~V 431 (431)
T TIGR03251 403 --CGERSIRFRPPLTVTREEIDAAIDAIRRV 431 (431)
T ss_pred --CCCCEEEEECCCCCCHHHHHHHHHHHCCC
T ss_conf --79998999889308899999999997269
No 96
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=100.00 E-value=7.1e-31 Score=212.61 Aligned_cols=316 Identities=19% Similarity=0.169 Sum_probs=216.2
Q ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCC
Q ss_conf 80344656677988999999999986378688722443688589999999984012888516741660245655666316
Q gi|254780486|r 33 DFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQ 112 (381)
Q Consensus 33 ~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~ 112 (381)
||.| ||.-- -||++++|..++- .|- ..+|+.+...+||+++|+++|+|++++++||++||+.++.++++
T Consensus 1 df~S-Dt~t~-p~p~m~~A~~~A~---~gd------~~yg~D~~~~~le~~~a~l~g~eaa~f~~sGT~aN~~al~~~~~ 69 (338)
T cd06502 1 DFRS-DTVTG-PTPEMLEAMAAAN---VGD------DVYGEDPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQ 69 (338)
T ss_pred CCCC-CCCCC-CCHHHHHHHHCCC---CCC------CCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHCC
T ss_conf 9765-31888-9999999998063---678------66678989999999999984898299807841899999998569
Q ss_pred CCCCCCHHHHCCHHHHHH---HHHCCCCCEEECCCC----HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH---H
Q ss_conf 897100454202677526---664087640305688----147899764310002478607971462157661346---8
Q gi|254780486|r 113 ATDLIVYDKLVHASIREG---INSGKAQAIAIPHNN----INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP---L 182 (381)
Q Consensus 113 ~~d~ii~D~~~HaSi~~g---~~ls~a~~~~f~HnD----~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap---L 182 (381)
|++.|++++.+|.+..++ ..++++++.++++.| ++++++.++.....+.....+|.+|..-. .|.+-| |
T Consensus 70 ~~~~vi~~~~aHi~~~E~g~~~~~~G~~~~~~~~~~g~l~~~~i~~~i~~~~~~h~~~~~lv~ient~e-~G~v~~~~el 148 (338)
T cd06502 70 PGGSVICHETAHIYTDEAGAPEFLSGVKLLPVPGENGKLTPEDLEAAIRPRDDIHFPPPSLVSLENTTE-GGTVYPLDEL 148 (338)
T ss_pred CCCEEEEECCCCEEEECCCCHHHHCCCEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCCEEEEEEECCC-CCEECCHHHH
T ss_conf 997588504671456537739987496256433899973899999963156886466520799873128-9631279999
Q ss_pred HHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCC-EEEEEECCCCCCCCCCCCCCCEECC
Q ss_conf 999998631360898613112223477764011000013465210013465653-0267524510010000121100001
Q gi|254780486|r 183 DDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGS-SGALVGSNKIIYDYLINYAKPFIYT 261 (381)
Q Consensus 183 ~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~-~GG~i~~~~~ii~~l~~~~~~~ifs 261 (381)
++|.++|++||..|.+|.|.-+......|....++. ...+.++..|||++|+ .|+.|++++++++..+..-.- +.
T Consensus 149 ~~i~~~a~~~gl~lH~DGARl~nA~~a~g~~~~~~~--~~~Dsvs~~~sKglgap~gavl~g~~~~i~~a~~~rK~--~G 224 (338)
T cd06502 149 KAISALAKENGLPLHLDGARLANAAAALGVALKTYK--SGVDSVSFCLSKGGGAPVGAVVVGNRDFIARARRRRKQ--AG 224 (338)
T ss_pred HHHHHHHHHCCCEEEECCCCEECEEECCCCCHHHHH--HHCCEEEEECCCCCCCCCCEEEECCHHHHHHHHHHHHH--HC
T ss_conf 999999997497266536530044541599989986--41878999665667774324787788999999999986--47
Q ss_pred CCCC--CCHHHHHHHHHHHHHHCCC--HHHHHHHHHHHHHHHHHCCCCC---CCCCCEEEEEECCHH----HHHHHHHHH
Q ss_conf 3577--5025789887898862710--2247899999999876417978---998972899958979----999999999
Q gi|254780486|r 262 TSPS--PILAVVACEALKLIKRKPA--LHKSLLQLINITDKIANKKIGF---SSQSHIQSIVIGDNK----SCLNIAKNL 330 (381)
Q Consensus 262 t~l~--P~~~aaa~aal~~l~~~~~--~~~~l~~~~~~~~~~~~~~~g~---~~~s~I~~v~~gd~~----~a~~~~~~L 330 (381)
..+. ...+++.+++| +++.+ +.++...+++++.+ ....+++ +.+++|+.+...+.. ...+...++
T Consensus 225 g~mrq~g~lAAa~~~~L---~~~~~~~~l~~dh~~A~~La~-~l~~~~~~~~~~etniv~~~~~~~n~~~~~~~~~~~~~ 300 (338)
T cd06502 225 GGMRQSGFLAAAGLAAL---ENDLWLRRLRHDHEMARRLAE-ALEELGGLESEVQTNIVLLDPVEANAVFVELSKEAIER 300 (338)
T ss_pred CCHHHHHHHHHHHHHHH---HCCHHHHHHHHHHHHHHHHHH-HHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 53645999999999998---548378999999999999999-99867997666657758983275418898746999999
Q ss_pred HHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 977918986228888888703999628789999999999999999
Q gi|254780486|r 331 QKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 331 ~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
+++|+.+.+. +...+|++.+..+|++||++++++|+++
T Consensus 301 ~~~g~~~~~~-------~~~~vR~Vt~~~~t~~dvd~~i~~ik~v 338 (338)
T cd06502 301 RGEGVLFYAW-------GEGGVRFVTHWDTTEEDVDELLSALKAV 338 (338)
T ss_pred HHCCEEEEEC-------CCCEEEEEECCCCCHHHHHHHHHHHHHC
T ss_conf 9689699946-------9992899988999999999999999629
No 97
>KOG1402 consensus
Probab=99.97 E-value=6.4e-30 Score=206.63 Aligned_cols=330 Identities=18% Similarity=0.277 Sum_probs=233.7
Q ss_pred HHCCCEEEECCCCEEEECCC-CCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEE
Q ss_conf 97598399928976898034-4656677-988999999999986378688722443688589999999984012888516
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTS-HDYLALS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKML 94 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s-~dYLGl~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al 94 (381)
|++|.+.+..+|++++||-| ++-..-. .||.|+++.+++.++ .-+ +||.++ .+...+.|+.+++++|.+..+
T Consensus 47 ka~g~~vwD~eGk~ylDflsaysaVnqGhchpki~~aLqeq~~k-Ltl---ssrafY--nd~~~~f~~~vt~lf~~~kvl 120 (427)
T KOG1402 47 KAKGSRVWDPEGKEYLDFLSAYSAVNQGHCHPKIIKALQEQADK-LTL---SSRAFY--NDVLGEFAEYVTKLFGYDKVL 120 (427)
T ss_pred ECCCCEEECCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH-HHH---HHHHHH--HHHHHHHHHHHHHHCCCCEEE
T ss_conf 16785798777550344665542102577877999999998767-513---367776--556789999999866854553
Q ss_pred EECCCCHHHHHHHHHHC------C--CCC--CCCHHHHC-CHHHHHHHHHCCC-------------CCEEECCCCHHHHH
Q ss_conf 74166024565566631------6--897--10045420-2677526664087-------------64030568814789
Q gi|254780486|r 95 YFGSGYAANMAILSTLP------Q--ATD--LIVYDKLV-HASIREGINSGKA-------------QAIAIPHNNINSFA 150 (381)
Q Consensus 95 ~~~sG~~An~~~i~~l~------~--~~d--~ii~D~~~-HaSi~~g~~ls~a-------------~~~~f~HnD~~~Le 150 (381)
-+++|..|+.+++...- + |.+ .|++-..| |.--.-.+.+|.- .+...+.||.++||
T Consensus 121 pmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fgp~~P~~~~~v~Y~d~eale 200 (427)
T KOG1402 121 PMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFGPFLPGVVDKVPYGDAEALE 200 (427)
T ss_pred ECCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCEEEEEEECCCCCHHHCCCCCCCCCCEEECCCCHHHHH
T ss_conf 23554067787999999977763168866004898505556733456771578006545699999863032268779999
Q ss_pred HHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-EEEHHCCCCCC
Q ss_conf 9764310002478607971462157661346----899999863136089861311222347776401-10000134652
Q gi|254780486|r 151 ENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL-THIIEERNNVI 225 (381)
Q Consensus 151 ~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~-~~~~~~~~~~i 225 (381)
..|+.- .-.-.++|.|..--|-+.| |++.++||++||+++|.||.| +| +|++|+-. +++..++|+++
T Consensus 201 ~~l~~~------~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQ-TG-l~RTGk~la~d~env~PDiv 272 (427)
T KOG1402 201 VALKSP------NVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQ-TG-LARTGKLLACDYENVRPDIV 272 (427)
T ss_pred HHHCCC------CEEEEEEECCCCCCCEEECCCHHHHHHHHHHHHHCEEEEEHHHH-HC-CCCCCCEEEEEHHHCCCCEE
T ss_conf 986298------75689851134665337289206789999987514788824434-25-23467478865431587768
Q ss_pred CCCCCCCCCCCEEE-----EEECCCCCCCCCC--CCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH-HHH
Q ss_conf 10013465653026-----7524510010000--121100001357750257898878988627102247899999-999
Q gi|254780486|r 226 VMHSCSKALGSSGA-----LVGSNKIIYDYLI--NYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLIN-ITD 297 (381)
Q Consensus 226 v~~TlsKa~g~~GG-----~i~~~~~ii~~l~--~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~-~~~ 297 (381)
+ |+|||+ || .++++.+++-.++ .|+.+| +.+|..++++.++|++++++. +.++..++.. ++.
T Consensus 273 i---lgKalS--GG~~Pvsavl~~~~im~~~~pgeHgsTy----ggNpLg~~vaiAalevi~eek-L~era~~lG~~l~~ 342 (427)
T KOG1402 273 I---LGKALS--GGVYPVSAVLADDDIMLNIKPGEHGSTY----GGNPLGCAVAIAALEVIVEEK-LVERAAKLGEILRD 342 (427)
T ss_pred E---EECCCC--CCEEEEEEEEECHHHHHCCCCCCCCCCC----CCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
T ss_conf 9---811136--8704568998547898616877555656----888088899999999999978-99999998799999
Q ss_pred HHHHCCCCC-------CCCCCEEEEEEC----CHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHH
Q ss_conf 876417978-------998972899958----979999999999977918986228888888703999628789999999
Q gi|254780486|r 298 KIANKKIGF-------SSQSHIQSIVIG----DNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIV 366 (381)
Q Consensus 298 ~~~~~~~g~-------~~~s~I~~v~~g----d~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~ 366 (381)
++....-.+ .+..-+..|.+. ....+.+++-.|.++|+++.+ .....|||.++...+++|++
T Consensus 343 ~L~~l~~~~p~~v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkp-------tH~~IiRfaPPL~I~e~dl~ 415 (427)
T KOG1402 343 QLNKLQKKFPHVVKEVRGRGLLNAIVINPSKTSGQDAWDVCLALKENGLLAKP-------THGNIIRFAPPLVISEEDLR 415 (427)
T ss_pred HHHHCCCCCCCHHHEEECCCEEEEEEECCCCCCCHHHHHHHHCCCCCCCCCCC-------CCCCEEEECCCCCCCHHHHH
T ss_conf 99854402564443342253378899615556646588888703025610477-------78875874688435789998
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999988
Q gi|254780486|r 367 KLFDILPQIIS 377 (381)
Q Consensus 367 ~~~~~l~~v~~ 377 (381)
+-++++.+.+.
T Consensus 416 eg~e~i~k~i~ 426 (427)
T KOG1402 416 EGIEAIEKTIA 426 (427)
T ss_pred HHHHHHHHHHC
T ss_conf 89999999742
No 98
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.97 E-value=9.2e-28 Score=193.20 Aligned_cols=337 Identities=18% Similarity=0.231 Sum_probs=221.9
Q ss_pred HHHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC---
Q ss_conf 9975983999289768980344---6566779889999999999863786887224436885899999999840128---
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG--- 89 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g--- 89 (381)
.+++|-|.++.+|+++||-.|- +-.|. +||++.+|+.++++ +..... .-.+ ++.+-.+|-++|+++..
T Consensus 31 ~~aeG~yl~d~~G~r~lDg~sg~W~~~~Gh-~~~~i~~Ai~~Q~~-~l~~~~--~~~~--t~~Pa~~LA~~L~~~aP~~~ 104 (449)
T COG0161 31 VRAEGVYLTDIDGRRYLDGMSGLWCVNHGH-GRPEIAEAIKKQLD-KLPHVM--FGGF--THEPAIELAEKLAELAPEGG 104 (449)
T ss_pred EECCEEEEEECCCCEEEECCCHHHHHHCCC-CCHHHHHHHHHHHH-HCCCCH--HCCC--CCCHHHHHHHHHHHHCCCCC
T ss_conf 636436999789989975210778863476-97799999999998-577401--1455--78369999999998679877
Q ss_pred CCCEEEECCCCHHHHHHHHHH-------CCC-CCCCCH-HHHCCHHHHHHHHHCC---------------CCCEEECC--
Q ss_conf 885167416602456556663-------168-971004-5420267752666408---------------76403056--
Q gi|254780486|r 90 FEKMLYFGSGYAANMAILSTL-------PQA-TDLIVY-DKLVHASIREGINSGK---------------AQAIAIPH-- 143 (381)
Q Consensus 90 ~e~al~~~sG~~An~~~i~~l-------~~~-~d~ii~-D~~~HaSi~~g~~ls~---------------a~~~~f~H-- 143 (381)
...+++.+||-.||..++.-. -+| ...+++ -.-.|.+-+-++-+++ .-..+.+|
T Consensus 105 l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~Sv~g~~~~~~~~~~~ll~~~~~~~~P~~y 184 (449)
T COG0161 105 LDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAMSVGGPVALRHAFYDPLLPEVLHLPAPYAY 184 (449)
T ss_pred CCEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHEECCCCHHHHHHHCCCCCCCCEECCCCCCC
T ss_conf 56799808961899999999999999659975318999526747665300135685455543014445576226899643
Q ss_pred --C-----------CHHHHHHHHHHHHHCCCCCCCEEEECCCCCC-CCCHHH----HHHHHHHHHHCCEEEEECCCCCCC
Q ss_conf --8-----------8147899764310002478607971462157-661346----899999863136089861311222
Q gi|254780486|r 144 --N-----------NINSFAENINKWRKSGGKGFPWIVVESIYSM-DGDKAP----LDDLVKIANDYDGFIVVDEAHATG 205 (381)
Q Consensus 144 --n-----------D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm-~G~~ap----L~~i~~l~~~y~~~LivDEah~~G 205 (381)
+ ..+.||+++.++ .+....-+++|.|--- .|-+.| |+++++||++||++||.||+- +|
T Consensus 185 ~~~~~~~~~~~~~~~a~~le~~i~~~---g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~iC~ky~ILlI~DEV~-tG 260 (449)
T COG0161 185 RRGFFGEGDEEFAEAADELEALILEH---GPETIAAFIVEPVVGGAGGMLVPPPGYLKRVREICDKYGILLIADEVA-TG 260 (449)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHC---CCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEECCCE-EC
T ss_conf 45777777488999999999999860---955289999552005667754187689999999999839479930110-07
Q ss_pred CCCCCCCE-EEEEHHCCCCCCCCCCCCCCCCCEEEE-----EECCCCCCCCCCCC-C----CCEECCCCCCCCHHHHHHH
Q ss_conf 34777640-110000134652100134656530267-----52451001000012-1----1000013577502578988
Q gi|254780486|r 206 VCGPLGKG-LTHIIEERNNVIVMHSCSKALGSSGAL-----VGSNKIIYDYLINY-A----KPFIYTTSPSPILAVVACE 274 (381)
Q Consensus 206 v~G~~G~G-~~~~~~~~~~~iv~~TlsKa~g~~GG~-----i~~~~~ii~~l~~~-~----~~~ifst~l~P~~~aaa~a 274 (381)
+||||.- .|+++++.||++ |++|++. ||| ++.+..+.+.+..- + .++.| +.+|..||++++
T Consensus 261 -FGRTG~~FA~e~~gi~PDi~---~~aKGLT--~GY~Pl~a~l~~~~I~~~~~~~~~~~f~HG~TY--sghPlacAaAla 332 (449)
T COG0161 261 -FGRTGKMFACEHAGIVPDIL---CLAKGLT--GGYLPLSAVLTSDRIYEAFSDGDAGAFMHGHTY--SGNPLACAAALA 332 (449)
T ss_pred -CCCCCHHHHHHHCCCCCCEE---EECCCCC--CCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCC--CCCHHHHHHHHH
T ss_conf -88575155665259997846---5513101--265010767505999999864668701447866--448999999998
Q ss_pred HHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC-------CCCCCCEEEEEECC---------HHHHHHHHHHHHHCCEEEE
Q ss_conf 7898862710224789999999987641797-------89989728999589---------7999999999997791898
Q gi|254780486|r 275 ALKLIKRKPALHKSLLQLINITDKIANKKIG-------FSSQSHIQSIVIGD---------NKSCLNIAKNLQKKGFDIR 338 (381)
Q Consensus 275 al~~l~~~~~~~~~l~~~~~~~~~~~~~~~g-------~~~~s~I~~v~~gd---------~~~a~~~~~~L~~~Gi~v~ 338 (381)
+|+++++++ +.++.++...++.+.....+. +....-|..|.+-. .+....+.+.++++|++++
T Consensus 333 ~L~i~e~e~-l~~~~~~~~~~l~~~L~~~l~~~p~VgdVR~~Gli~~iElv~d~~t~~~f~~~~~~~~~~~~~e~Gl~iR 411 (449)
T COG0161 333 NLDILEEED-LLERVAEIGAYLQAGLQAALADHPLVGDVRGLGLIGAIELVADKATKTPFEARVGARVRAAALERGLLIR 411 (449)
T ss_pred HHHHHHHCC-HHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCEEEE
T ss_conf 899998567-9999999999999999875136992787222655999998415666664045699999999997893895
Q ss_pred EECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 62288888887039996287899999999999999998873
Q gi|254780486|r 339 AIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 339 ~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
|+ |. .+=++|+...|++||+++++++.+.+++.
T Consensus 412 p~-------g~-~i~~~PPliit~~eid~l~~~l~~al~~~ 444 (449)
T COG0161 412 PL-------GD-VIYLMPPLIITREEIDELVDALREALDET 444 (449)
T ss_pred EC-------CC-EEEECCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 55-------98-89973883489999999999999999998
No 99
>PRK10534 L-threonine aldolase; Provisional
Probab=99.96 E-value=5.2e-28 Score=194.76 Aligned_cols=317 Identities=17% Similarity=0.194 Sum_probs=210.3
Q ss_pred EEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHH
Q ss_conf 89803446566779889999999999863786887224436885899999999840128885167416602456556663
Q gi|254780486|r 31 IWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTL 110 (381)
Q Consensus 31 ~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l 110 (381)
++||.|-+.=+ -+|++++|..+|- .|- -++|.-+.-.+||+++|+++|+|+++++|||++||+-++.++
T Consensus 1 ~id~rSDtvt~--p~~~m~~Am~~A~---~Gd------dvYgeDptv~~Le~~~A~l~G~eaalFvpsGTmaN~iAl~~~ 69 (333)
T PRK10534 1 MIDLRSDTVTR--PSRAMLEAMMAAP---VGD------DVYGDDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSH 69 (333)
T ss_pred CCCCCCCCCCC--CCHHHHHHHHCCC---CCC------CCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
T ss_conf 92465442899--9999999997375---577------545769899999999999858971899578757899999984
Q ss_pred CCCCCCCCHHHHCCHHHHHH---HHHCCCCCEEECCC-----CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH-
Q ss_conf 16897100454202677526---66408764030568-----8147899764310002478607971462157661346-
Q gi|254780486|r 111 PQATDLIVYDKLVHASIREG---INSGKAQAIAIPHN-----NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP- 181 (381)
Q Consensus 111 ~~~~d~ii~D~~~HaSi~~g---~~ls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap- 181 (381)
++|++.|++++.+|...+++ ..+++.+..+.+.+ ++++++..++... .+.....+|.+|.- ..|.+-|
T Consensus 70 ~~~g~~vi~~~~sHI~~~E~Gg~a~l~g~~~~~i~~~~~g~~~~~~v~~~i~~~~-~h~~~~~lv~lenT--~~G~v~p~ 146 (333)
T PRK10534 70 CERGEEYIVGQAAHNYLYEAGGAAVLGSIQPQPIDAAADGTLPLDKVAAKIKPDD-IHFARTRLLSLENT--HNGKVLPR 146 (333)
T ss_pred CCCCCEEEECCCCCCHHCCCCCHHHHCCCCEEEECCCCCCCCCHHHHHHHCCCCC-CCCCCEEEEEEEEC--CCCEECCH
T ss_conf 7899869875777610114664898769521551478898248999998618788-76676246655403--58853689
Q ss_pred --HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCC-EEEEEECCCCCCCCCCCCCCCE
Q ss_conf --8999998631360898613112223477764011000013465210013465653-0267524510010000121100
Q gi|254780486|r 182 --LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGS-SGALVGSNKIIYDYLINYAKPF 258 (381)
Q Consensus 182 --L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~-~GG~i~~~~~ii~~l~~~~~~~ 258 (381)
|++|.++|+++|..+.+|-|-=+-..-..|....++...- +.++-.|||++|+ .|+.++|++++|+.-+..-+
T Consensus 147 ~el~~i~~~a~~~gl~vHlDGARl~NA~~a~g~~~~e~~~~~--Dsvs~clsKgLGap~Gsvl~g~~~~i~~a~~~RK-- 222 (333)
T PRK10534 147 EYLKEAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQYC--DSFTICLSKGLGTPVGSLLVGNRDYIKRAIRWRK-- 222 (333)
T ss_pred HHHHHHHHHHHHCCCEEEECHHHHHHHHHHCCCCHHHHHHHC--CEEEEEEECCCCCCCCEEEECCHHHHHHHHHHHH--
T ss_conf 999999999997598376232777644654299999999758--9889874067887332146468999999999999--
Q ss_pred ECCCCC--CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHH-HHHHCCCC-CCCCCCEEEEEECCHHHHHHHHHHHHHCC
Q ss_conf 001357--750257898878988627102247899999999-87641797-89989728999589799999999999779
Q gi|254780486|r 259 IYTTSP--SPILAVVACEALKLIKRKPALHKSLLQLINITD-KIANKKIG-FSSQSHIQSIVIGDNKSCLNIAKNLQKKG 334 (381)
Q Consensus 259 ifst~l--~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~-~~~~~~~g-~~~~s~I~~v~~gd~~~a~~~~~~L~~~G 334 (381)
.+..++ .-..+++.+.+|+ +.-++...-+++.+.+. .+...... ...+++++++.+++. .+..+.+.+.++|
T Consensus 223 ~~GGgmrQ~g~lAAa~l~aL~---~~~~rl~~dH~nA~~La~~L~~~g~~~~~~eTN~vf~~~~~~-~~~~l~~~~~~~g 298 (333)
T PRK10534 223 MTGGGMRQAGILAAAGLYALK---HNVARLQEDHDNAAWLAQQLREAGADVMRQDTNMLFVRVGEE-NAAALGEYMRERN 298 (333)
T ss_pred HHCCHHHHHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHH-HHHHHHHHHHHCC
T ss_conf 854655589999999999996---399989999998999999999769874899764799977877-7999999999879
Q ss_pred EEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 18986228888888703999628789999999999999999887
Q gi|254780486|r 335 FDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 335 i~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
|++.. .+.+|++.+...|++||+++++++++++++
T Consensus 299 v~~~~---------~~~vR~Vth~~it~~dv~~~i~~~r~~l~~ 333 (333)
T PRK10534 299 VLINA---------SPIVRLVTHLDVSREQLAEVVAHWRAFLAR 333 (333)
T ss_pred EEECC---------CCCEEEEEECCCCHHHHHHHHHHHHHHHCC
T ss_conf 67579---------981899980899999999999999999719
No 100
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=1.6e-25 Score=179.25 Aligned_cols=319 Identities=20% Similarity=0.241 Sum_probs=197.1
Q ss_pred CEEEECCCC-CCCCCCCCHHHHHHHHHHHHH--HCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CEEEECCCC-HHH
Q ss_conf 768980344-656677988999999999986--378688722443688589999999984012888-516741660-245
Q gi|254780486|r 29 QDIWDFTSH-DYLALSSSTLLREKILSSLDS--KIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE-KMLYFGSGY-AAN 103 (381)
Q Consensus 29 ~~~l~f~s~-dYLGl~~~p~v~~a~~~a~~~--~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e-~al~~~sG~-~An 103 (381)
++.++|++| |=+|. .|.+.++..+++.. +|+ .+.+.+|=++||+++|.+ +-+++.+|. .+.
T Consensus 32 ~~ii~l~~Nenp~gp--~~~v~~ai~~~~~~~~~YP------------d~~~~~Lr~aiA~~~~v~~~~Ilv~nGs~e~i 97 (367)
T PRK02731 32 ADIIKLASNENPLGP--SPKAIEAIRAAADELHRYP------------DGSGFELKAALAEKFGVDPEQIILGNGSDEIL 97 (367)
T ss_pred CCEEEECCCCCCCCC--CHHHHHHHHHHHHHHCCCC------------CCCHHHHHHHHHHHHCCCHHHEEECCCHHHHH
T ss_conf 876881198999998--9999999998775511595------------98789999999999785811199857899999
Q ss_pred HHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCHH-HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHH
Q ss_conf 65566631689710045420267752666408764030568814-78997643100024786079714621576613468
Q gi|254780486|r 104 MAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHNNIN-SFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPL 182 (381)
Q Consensus 104 ~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD~~-~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL 182 (381)
..++.++++++|.|++-.=.-..-...+++.+++++.++-+|.. |++..+.... ++.+.+++.-.=. =+|.+-+.
T Consensus 98 ~l~~~a~~~pgd~Vl~~~P~f~~Y~~~a~~~G~~~~~vp~~~~~~d~~~l~~~i~---~~tklv~l~nPnN-PTG~~~~~ 173 (367)
T PRK02731 98 ELLARAYLGPGDEVIYSEHAFAVYPIAAQAVGAKPVEVPAKDYGHDLDAMLAAVT---PRTKLVFIANPNN-PTGTYLPA 173 (367)
T ss_pred HHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCC---CCCCEEEECCCCC-CCCCCCCH
T ss_conf 9999998479986444798626899999982988999547677659689998558---7886899828999-98865756
Q ss_pred HHHHHHHHH--CCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCC
Q ss_conf 999998631--36089861311222347776401100001346521001346565302---6752451001000012110
Q gi|254780486|r 183 DDLVKIAND--YDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKP 257 (381)
Q Consensus 183 ~~i~~l~~~--y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~ 257 (381)
.++.+|++. .++++++|||+.--+.+..-..........+++|+++||||+||..| ||+++++++++.+...-.+
T Consensus 174 ~~l~~l~~~~~~~~~vviDEaY~ef~~~~~~~~~~~l~~~~~n~iv~rSfSK~~glaGlRlGy~ia~~~~i~~l~~~~~p 253 (367)
T PRK02731 174 EEVERFLAGVPPDVLVVLDEAYAEYVARKDYEDGIELVKEFPNVVVTRTFSKAYGLAGLRVGYGIAPPEIIDALNRVRQP 253 (367)
T ss_pred HHHHHHHHHCCCCCEEEEEHHHHHHCCCCCCCCHHHHHHHCCCEEEEEECCHHHCCCCCCEEEEECCHHHHHHHHHHHCC
T ss_conf 99999998545576388411267642576665589997623764799746666516887058886699999999998476
Q ss_pred EECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHCCCCC---CCCCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 000135775025789887898862710224789999999987--6417978---99897289995897999999999997
Q gi|254780486|r 258 FIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKI--ANKKIGF---SSQSHIQSIVIGDNKSCLNIAKNLQK 332 (381)
Q Consensus 258 ~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~--~~~~~g~---~~~s~I~~v~~gd~~~a~~~~~~L~~ 332 (381)
| ..+.+...++.++|+ +++...+......+.++++ ....+|+ ++.+..+-+.+.+...+.++.++|++
T Consensus 254 ~----~v~~~aq~aa~aaL~---d~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~ps~~nFil~~~~~~~~a~~~~~~L~~ 326 (367)
T PRK02731 254 F----NVNSLALAAAVAALD---DDAFVEKSRELNAKGMARLEEFLAELGLEYIPSYGNFILVDFDDGKDAAAIYEALLK 326 (367)
T ss_pred C----CCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEECCCCCCHHHHHHHHHH
T ss_conf 6----588999999999966---999999999999999999999999784988789861899988999999999999996
Q ss_pred CCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 7918986228888888703999628789999999999999999887
Q gi|254780486|r 333 KGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 333 ~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
+||+|++..-.-. ...+||++. |++|+++++++|+++++|
T Consensus 327 ~gI~vr~~~~fgl---~~~~Risig---t~een~~li~al~~~l~e 366 (367)
T PRK02731 327 RGVIVRPLAGYGL---PNALRITIG---TPEENRRFLAALKEFLAQ 366 (367)
T ss_pred CCEEEEECCCCCC---CCEEEEEEC---CHHHHHHHHHHHHHHHHH
T ss_conf 8938985888899---896999928---999999999999999850
No 101
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=3.4e-25 Score=177.17 Aligned_cols=318 Identities=16% Similarity=0.189 Sum_probs=205.7
Q ss_pred EEECCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CEEEECCCCHHHH-HHH
Q ss_conf 8980344-656677988999999999986378688722443688589999999984012888-5167416602456-556
Q gi|254780486|r 31 IWDFTSH-DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE-KMLYFGSGYAANM-AIL 107 (381)
Q Consensus 31 ~l~f~s~-dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e-~al~~~sG~~An~-~~i 107 (381)
.+-++|| |=+|. .|.+.+|..+++.. . .| + ..+.+.+|-++||+++|.+ +-+++..|-.--+ .++
T Consensus 35 ~ikL~sNENP~gp--sp~v~~Ai~~~~~~-~------~r--Y-Pd~~~~~Lr~~lA~~~gv~~e~I~~gnGSdeli~~~~ 102 (370)
T PRK08153 35 RARIGANESGFGP--SPSVIAAMREAAAE-V------WK--Y-GDPENHDLRHALAAHHGVAPENIMVGEGIDGLLGLIV 102 (370)
T ss_pred CEEECCCCCCCCC--CHHHHHHHHHHHHH-C------CC--C-CCCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHHHHH
T ss_conf 7786899999898--99999999976864-5------67--9-9977899999999986878667998088899999999
Q ss_pred HHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC-CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHH
Q ss_conf 663168971004542026775266640876403056-8814789976431000247860797146215766134689999
Q gi|254780486|r 108 STLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH-NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLV 186 (381)
Q Consensus 108 ~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H-nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~ 186 (381)
.++++++|.|+.-.-.......-+...+++++.++. .|..+++..+...... +.+ +|++-.=.-=+|.+.+..++.
T Consensus 103 ~a~~~~g~~vv~~~p~y~~y~~~~~~~g~~~~~vp~~~~~~d~~~~l~~~~~~--~~k-lv~l~nPNNPTG~~~~~~~l~ 179 (370)
T PRK08153 103 RLYVEPGDAVVTSLGAYPTFNYHVAGFGGRLVTVPYRDDHEDLDALLDAARRE--NAP-LVYLANPDNPMGSWHPAADIV 179 (370)
T ss_pred HHHHCCCCCCCCCCCCCCHHHHHHHHHCCEEEEEECCCCCCCHHHHHHHCCCC--CCC-EEEECCCCCCCCCCCCHHHHH
T ss_conf 99855999234378875169999998196699994456544869999860378--973-899768959857767868899
Q ss_pred HHHHHC--CEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECC
Q ss_conf 986313--6089861311222347776401100001346521001346565302---67524510010000121100001
Q gi|254780486|r 187 KIANDY--DGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYT 261 (381)
Q Consensus 187 ~l~~~y--~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifs 261 (381)
++++.. +++++||||+.- +.+.. .........+++|++.||||+||..| ||..+++++++.+.....+|
T Consensus 180 ~l~~~~~~~~lvVvDEAY~e--f~~~~-~~~~l~~~~~NliVlRTfSK~ygLAGlRlGY~ia~~~li~~l~k~r~p~--- 253 (370)
T PRK08153 180 AFIEALPETTLLVLDEAYCE--TAPAS-AAPPIDPDDPNVIRMRTFSKAYGLAGARVGYAIGTPGTIKAFDKVRNHF--- 253 (370)
T ss_pred HHHHHCCCCCEEEEEHHHHH--HCCCC-CHHHHHHCCCCEEEEEECCHHCCCCCCCCCCCCCCHHHHHHHHHHCCCC---
T ss_conf 99984777738962153564--35642-1778874399889998262203788874320138999999999864898---
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHCCCCC---CCCCCEEEEEECC-HHHHHHHHHHHHHCCE
Q ss_conf 35775025789887898862710224789999999987--6417978---9989728999589-7999999999997791
Q gi|254780486|r 262 TSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKI--ANKKIGF---SSQSHIQSIVIGD-NKSCLNIAKNLQKKGF 335 (381)
Q Consensus 262 t~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~--~~~~~g~---~~~s~I~~v~~gd-~~~a~~~~~~L~~~Gi 335 (381)
+.+....+++.++|+ +.+.+.+...++.+.++++ .....|+ ++.++.+.+.++. ...+.++.++|+++||
T Consensus 254 -~vn~~aq~aa~aaL~---d~~~~~~~~~~i~~~R~~l~~~l~~~g~~~~pS~aNFil~~~~~~~~~a~~l~~~L~~~GI 329 (370)
T PRK08153 254 -GMNRIAQAAALAALK---DQAYLAEVVAKIAAARDRIAAIARANGLTPLPSATNFVAIDCGRDGAFARAVLDGLIARDI 329 (370)
T ss_pred -CCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEECCCCHHHHHHHHHHHHHCCE
T ss_conf -877999999999977---9999999999999999999999986858479997877999848974699999999997891
Q ss_pred EEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 89862288888887039996287899999999999999998873
Q gi|254780486|r 336 DIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 336 ~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
+|+.... +.....|||++. |+||.++++++|++|++|.
T Consensus 330 lVR~~~~---~~l~~~lRIsiG---t~een~~~l~aL~eiLk~~ 367 (370)
T PRK08153 330 FVRMPGV---APLDRCIRVSVG---PEEELDLFAEALPEALKAA 367 (370)
T ss_pred EECCCCC---CCCCCEEEEECC---CHHHHHHHHHHHHHHHHHH
T ss_conf 9944998---889998999739---9999999999999999986
No 102
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=2e-25 Score=178.66 Aligned_cols=317 Identities=20% Similarity=0.261 Sum_probs=202.1
Q ss_pred CCCCEEEECCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC-EEEE-CCCCHH
Q ss_conf 289768980344-6566779889999999999863786887224436885899999999840128885-1674-166024
Q gi|254780486|r 26 LRRQDIWDFTSH-DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEK-MLYF-GSGYAA 102 (381)
Q Consensus 26 ~~~~~~l~f~s~-dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~-al~~-~sG~~A 102 (381)
+++.++++|++| |=+| -.|.++++..++++. . .| + ....+.+|-+++|+++|.+. -+++ .+|...
T Consensus 32 ~~~~~ii~ls~nenp~g--p~p~v~~a~~~~~~~-~------~~--Y-Pd~~~~~Lr~aiA~~~gv~~e~ii~~gnGs~e 99 (369)
T PRK00950 32 IDPESIIKLGSNENPLG--PSPKAVEALIDEAPN-I------HQ--Y-PEPDAPELREAISKYTGVPVENIIVGGDGADE 99 (369)
T ss_pred CCCCCEEEECCCCCCCC--CCHHHHHHHHHHHHC-C------CC--C-CCCCHHHHHHHHHHHHCCCCCCEEEECCCHHH
T ss_conf 89689888129899867--889999999987532-5------87--9-99888999999999868197587997564999
Q ss_pred HH-HHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC---C----CHHHHHHHHHHHHHCCCCCCCEEEECCCCC
Q ss_conf 56-556663168971004542026775266640876403056---8----814789976431000247860797146215
Q gi|254780486|r 103 NM-AILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH---N----NINSFAENINKWRKSGGKGFPWIVVESIYS 174 (381)
Q Consensus 103 n~-~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H---n----D~~~Le~~l~~~~~~~~~~~~~vv~egv~S 174 (381)
-+ .++.+++++||.|+.-.=.=..-...+++.+++++.++- + |++++++. .. ++.+.+++.-.=.
T Consensus 100 ~i~~l~~~~~~~Gd~vl~~~P~y~~Y~~~a~~~G~~~~~v~~~~~~~f~~d~~~l~~~---i~---~~tklv~l~nPnN- 172 (369)
T PRK00950 100 IIDVLMRILIDEGDEVIIPIPTFTYYEISARACGAKPVYAKFDREEDFKLDVESVLNA---IT---DKTKIIFLCTPNN- 172 (369)
T ss_pred HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHH---CC---CCCEEEEEECCCC-
T ss_conf 9999999995799999989887303699999839820223677124998899999973---67---6760899808999-
Q ss_pred CCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCC
Q ss_conf 7661346899999863136089861311222347776401100001346521001346565302---6752451001000
Q gi|254780486|r 175 MDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYL 251 (381)
Q Consensus 175 m~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l 251 (381)
=+|.+.+..+|.++++++++++++|||+.- +.+ ..........+++|++.||||+||..| ||+++++++++.+
T Consensus 173 PTG~~~~~~el~~l~~~~~~~vv~DEaY~e-f~~---~~~~~l~~~~~n~iv~~SfSK~~~laGlRlGy~i~~~~li~~l 248 (369)
T PRK00950 173 PTGNLIPEEDIRKIVESTDALVFVDEAYIE-FAE---YDLTELALEYDNVLVLRTFSKVFGLAGMRIGYGIMPKWIIEYM 248 (369)
T ss_pred CCCEEECHHHHHHHHHCCCEEEEECCCHHH-HCC---CCHHHHHHHCCCEEEEEECCHHHHCCCCEEEEEECCHHHHHHH
T ss_conf 878324799987898718879994242675-257---9715678745865898412155405775046764699999999
Q ss_pred CCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHCCCC-C---CCCCCEEEEEECCHHHHHH
Q ss_conf 012110000135775025789887898862710224789999999987--641797-8---9989728999589799999
Q gi|254780486|r 252 INYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKI--ANKKIG-F---SSQSHIQSIVIGDNKSCLN 325 (381)
Q Consensus 252 ~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~--~~~~~g-~---~~~s~I~~v~~gd~~~a~~ 325 (381)
+....+| +.+.+..+++.++|+ +.+...+......+.++.+ ....++ + ++.+..+.+.+.+...+.+
T Consensus 249 ~~~~~~~----~v~~~aq~aa~aaL~---~~~~~~~~~~~~~~~R~~l~~~L~~l~~~~v~ps~anFil~~~~~~~~~~~ 321 (369)
T PRK00950 249 MRIKPPF----SLTRLSQAAAIAALR---DKEFIEKSIELGIESREYLYEGLKKFKPLKVYPSEANYVLVDVKPGMTAKE 321 (369)
T ss_pred HHHCCCC----CHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEECCCCCCHHH
T ss_conf 9856875----706999999999950---958899999999999999999998579977878986189998999999999
Q ss_pred HHHHHHHCCEEEEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9999997791898622-888888870399962878999999999999999988
Q gi|254780486|r 326 IAKNLQKKGFDIRAIR-PPTVPINTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 326 ~~~~L~~~Gi~v~~i~-~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
++++|+++||+|.+.. |+ +.+...+||++. |.+|.++++++|+++++
T Consensus 322 ~~~~Ll~~gI~Vr~g~~f~--~~~~~~iRisig---t~~en~~ll~al~~il~ 369 (369)
T PRK00950 322 FTEELLKKGVIVRDCTSFE--GLGDYYIRVSIG---TLEENERFLEILKEIVE 369 (369)
T ss_pred HHHHHHHCCEEEEECCCCC--CCCCCEEEEEEC---CHHHHHHHHHHHHHHHC
T ss_conf 9999996995999687777--789898999808---99999999999999859
No 103
>TIGR00700 GABAtrnsam 4-aminobutyrate transaminase; InterPro: IPR004632 Eukaryotic 4-aminobutyrate aminotransferase (2.6.1.19 from EC) is a class III pyridoxal-phosphate-dependent aminotransferase. The enzyme catalyses the conversion of 4-aminobutanoate and 2-oxoglutarate into succinate semialdehyde and L-glutamate. The degree of sequence difference between this set and known bacterial examples is greater than the distance between, in either set, the most similar enzyme with a distinct function, and so the prokaryotic and eukaryotic sets have been placed into separate families. This family describes known bacterial examples of the enzyme. The best archaeal matches are presumed but not trusted to have the equivalent function. Escherichia coli has two isozymes. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.; GO: 0003867 4-aminobutyrate transaminase activity, 0009448 gamma-aminobutyric acid metabolic process.
Probab=99.95 E-value=1.3e-25 Score=179.77 Aligned_cols=337 Identities=17% Similarity=0.243 Sum_probs=236.2
Q ss_pred HHHCCCEEEECCCCEEEECCCCCCCCCC------CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC-
Q ss_conf 9975983999289768980344656677------988999999999986378688722443688589999999984012-
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDFTSHDYLALS------SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF- 88 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f~s~dYLGl~------~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~- 88 (381)
.+.+|-...++||+++|||+| |.+ +||.|++|+.++++...+++. .=+ ..+-|-+|-++|+.+-
T Consensus 20 ~~aega~l~DvdGnr~IDfa~----gIavln~GhshP~vV~AV~~Q~~ef~Ht~f--~v~---pYe~Yv~lAEkln~iaP 90 (427)
T TIGR00700 20 AKAEGAILKDVDGNRYIDFAA----GIAVLNVGHSHPKVVEAVKRQVEEFTHTAF--QVV---PYESYVELAEKLNAIAP 90 (427)
T ss_pred EECCCCEEEECCCCEEEHHCC----CHHHHCCCCCCHHHHHHHHHHHHHHCCCCC--EEE---CCHHHHHHHHHHCCCCC
T ss_conf 755884787437752100011----023203689873589999999997438853--452---16258999999715788
Q ss_pred --CCCCEEEECCCCHHHHHHHH---HHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC--------------------
Q ss_conf --88851674166024565566---63168971004542026775266640876403056--------------------
Q gi|254780486|r 89 --GFEKMLYFGSGYAANMAILS---TLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH-------------------- 143 (381)
Q Consensus 89 --g~e~al~~~sG~~An~~~i~---~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H-------------------- 143 (381)
|...+++|+||..|-.=++. .+++|.-+|=.|.--|.--..-+ .-.+|+.+||-
T Consensus 91 gSg~kk~~ffnsGAEAVENAVKIAR~yTgrpgVvaF~~gfHGRTnmTM-alT~Kv~PYK~GFGPFapevY~aP~py~y~~ 169 (427)
T TIGR00700 91 GSGEKKAVFFNSGAEAVENAVKIARKYTGRPGVVAFDRGFHGRTNMTM-ALTAKVKPYKIGFGPFAPEVYRAPYPYDYRD 169 (427)
T ss_pred CCCCHHEEEECCCHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHH-HHHHCCCCCCCCCCCCCCCCEECCCCCCCCC
T ss_conf 973100021115437888899999874589616863687466126788-7652278734578886745211688720024
Q ss_pred ---------CC--HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCC
Q ss_conf ---------88--147899764310002478607971462157661346----899999863136089861311222347
Q gi|254780486|r 144 ---------NN--INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCG 208 (381)
Q Consensus 144 ---------nD--~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G 208 (381)
|| ++..++.-..-+.-.++.-..||.|.|-.=-|-+.| ++.|+++|+||++++|-||+|+ | +-
T Consensus 170 ~~~~~q~s~d~m~~~A~~~~f~~dkqv~a~~vAa~v~EPvQGEGGFivp~k~fv~a~~~~C~ehgiVfiADEvQt-G-FA 247 (427)
T TIGR00700 170 IALDKQESLDDMVLAAIEALFVADKQVEAENVAAVVIEPVQGEGGFIVPAKEFVAAVLDLCKEHGIVFIADEVQT-G-FA 247 (427)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCEEEEECCCCC-C-CC
T ss_conf 334422220038999999831210332501043789732247887333858899999997543875899725456-8-00
Q ss_pred CCCC-EEEEEHHC---CCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCC--CCCCCEECCCCCCCCHHHHHHHHHHHH
Q ss_conf 7764-01100001---346521001346565302---67524510010000--121100001357750257898878988
Q gi|254780486|r 209 PLGK-GLTHIIEE---RNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLI--NYAKPFIYTTSPSPILAVVACEALKLI 279 (381)
Q Consensus 209 ~~G~-G~~~~~~~---~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~--~~~~~~ifst~l~P~~~aaa~aal~~l 279 (381)
|||. ..+||++. .||+| |.+|+++. | .-|.|+.+++|.=- --+.+| +.+|..|||+++.|+++
T Consensus 248 RTG~~FA~eH~~~dGl~PDLi---t~aKslA~-GlPLSgV~GrAeimdApapGgLGGTy----aGnPlacAAAlAvl~iI 319 (427)
T TIGR00700 248 RTGKLFAIEHYDDDGLKPDLI---TVAKSLAD-GLPLSGVVGRAEIMDAPAPGGLGGTY----AGNPLACAAALAVLDII 319 (427)
T ss_pred HHCCCEEEEECCCCCCCCCHH---HHHHHHHC-CCCCCHHHCCHHHCCCCCCCCCCCCC----CCCHHHHHHHHHHHHHH
T ss_conf 002112541006788875188---78667735-68621110441211688888887755----68879999999999863
Q ss_pred HHCCCHHHHHHHHHHHH-HHHHHCC-----C-CCCCCCCEEEEEEC--------CHHHHHHHHHHHHHCCEEEEEECCCC
Q ss_conf 62710224789999999-9876417-----9-78998972899958--------97999999999997791898622888
Q gi|254780486|r 280 KRKPALHKSLLQLINIT-DKIANKK-----I-GFSSQSHIQSIVIG--------DNKSCLNIAKNLQKKGFDIRAIRPPT 344 (381)
Q Consensus 280 ~~~~~~~~~l~~~~~~~-~~~~~~~-----~-g~~~~s~I~~v~~g--------d~~~a~~~~~~L~~~Gi~v~~i~~Pt 344 (381)
+++ .+-+|..++-+.. +++...+ + .+......+.|.+. |...+.+++.+-..+|+++- |
T Consensus 320 e~e-gL~ERa~qig~~~~d~l~~~k~~~p~IgdvRglGaMiAvE~vkdp~T~EPda~~a~~ia~~A~a~GlllL-----T 393 (427)
T TIGR00700 320 EEE-GLIERAEQIGKLVKDKLIELKEEVPAIGDVRGLGAMIAVELVKDPDTTEPDAALAEKIAAAALAAGLLLL-----T 393 (427)
T ss_pred CCC-CHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHH-----H
T ss_conf 113-1247899987889888888876067211120263357888654887888317999999999975682212-----3
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 8888703999628789999999999999999887
Q gi|254780486|r 345 VPINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 345 Vp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
....-..|||-.+...+|+.++..+++|...|++
T Consensus 394 cG~~GNiIRfL~PLtI~D~ll~egl~Il~a~L~d 427 (427)
T TIGR00700 394 CGIYGNIIRFLTPLTISDELLDEGLDILEAALAD 427 (427)
T ss_pred CCHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 0301155543488654678898899999998529
No 104
>pfam00202 Aminotran_3 Aminotransferase class-III.
Probab=99.94 E-value=1.2e-25 Score=180.01 Aligned_cols=268 Identities=19% Similarity=0.236 Sum_probs=182.6
Q ss_pred HHCCCEEEECCCCEEEECCCCCC-CCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC--CCCC
Q ss_conf 97598399928976898034465-6677-988999999999986378688722443688589999999984012--8885
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSHDY-LALS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF--GFEK 92 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~dY-LGl~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~--g~e~ 92 (381)
+++|.+.++.||+++|||.+..- ..|. +||+|.+|+.+++. +....+ + ..-.++.-.+|.++|.+.+ +.+.
T Consensus 4 r~~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~i~~Ai~~q~~-~~~~~~---~-~~~~~~~~~~lae~l~~~~p~~~~~ 78 (338)
T pfam00202 4 KAKGVWLYDVDGRRYLDFLSGIAVVNLGHCHPKIVQAVKEQAD-KLTHTS---F-RAFTTEPALQLAEKLAQLTPGGLDR 78 (338)
T ss_pred ECCCCEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHH-HCCCCC---C-CCCCCHHHHHHHHHHHHHCCCCCCE
T ss_conf 1358999959969999966198863416995999999999995-389856---6-7558889999999999857888687
Q ss_pred EEEECCCCHHHHHHHHHH---------CCCCCCCCHHHHCCHHHHHHHHHCC------------CCCEEECCCCHHHHH-
Q ss_conf 167416602456556663---------1689710045420267752666408------------764030568814789-
Q gi|254780486|r 93 MLYFGSGYAANMAILSTL---------PQATDLIVYDKLVHASIREGINSGK------------AQAIAIPHNNINSFA- 150 (381)
Q Consensus 93 al~~~sG~~An~~~i~~l---------~~~~d~ii~D~~~HaSi~~g~~ls~------------a~~~~f~HnD~~~Le- 150 (381)
+++++||..||..++..- +++..++..+..-|.+..-..-+++ ..+..++++|....+
T Consensus 79 v~f~~sGseA~e~AiklAr~~~~~~g~t~r~~il~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 158 (338)
T pfam00202 79 VFFMNSGSEANETAIKLARQYAKKKGATGKTKIIAFSGGFHGRTLGALSVTGSSGYKKGFGPSLPGVYFLPYPDLEAAEE 158 (338)
T ss_pred EEEECCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCHHHHHH
T ss_conf 99828768999999999999777537899887999938825887305881588555556778999945748997354200
Q ss_pred ------HHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCE-EEEEHH
Q ss_conf ------9764310002478607971462157661346----89999986313608986131122234777640-110000
Q gi|254780486|r 151 ------ENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKG-LTHIIE 219 (381)
Q Consensus 151 ------~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G-~~~~~~ 219 (381)
..++......++....|++|.|.+..|.+.| +++++++|++||++||+||++ +| +|++|.+ ..++++
T Consensus 159 ~~~~~~~~~~~~~~~~~~~iaaviiEPi~g~~G~~~~~~~yl~~lr~lc~~~gillI~DEV~-tG-fgRtG~~~~~~~~g 236 (338)
T pfam00202 159 ELACADEALRLIKAVHDDNIAAVIVEPIQGEGGVVPPPPGFLAGLREICKKHGVLLIADEVQ-TG-FGRTGKLFACEHYG 236 (338)
T ss_pred HHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCCEECCCCE-EC-CCCCCCCCHHHHCC
T ss_conf 15668999999998589977999998877889976798799999999974327757645310-08-77534874023249
Q ss_pred CCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 1346521001346565302---6752451001000012110000135775025789887898862710224789999999
Q gi|254780486|r 220 ERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINIT 296 (381)
Q Consensus 220 ~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~ 296 (381)
+.|+++ ||||++|. | |.+++++++.+.+.....+..| +.+|..|++++++|+++++++ +.+++.+..+++
T Consensus 237 v~PDiv---~~gK~l~~-G~P~sav~~~~~i~~~~~~~~~~~T~--~g~p~~~aaa~a~L~~l~~~~-l~~~~~~~g~~l 309 (338)
T pfam00202 237 VTPDIM---TLAKALTG-GLPLSAVLATAEIMQAFHPGSHGGTF--GGNPLACAAALAVLDIIEDEN-LLQNAQEKGDYL 309 (338)
T ss_pred CCCEEE---EECCCCCC-CCCCCCCCCCHHHHHHCCCCCCCCCC--CHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHH
T ss_conf 887599---95642458-99875311647799717799958777--664999999999999996558-999999999999
Q ss_pred HH
Q ss_conf 98
Q gi|254780486|r 297 DK 298 (381)
Q Consensus 297 ~~ 298 (381)
.+
T Consensus 310 ~~ 311 (338)
T pfam00202 310 RK 311 (338)
T ss_pred HH
T ss_conf 99
No 105
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=5.3e-24 Score=169.77 Aligned_cols=316 Identities=18% Similarity=0.256 Sum_probs=189.7
Q ss_pred CCCCEEEECCCC-CCCCCCCCHHHHHHHHHHHHH--HCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CEEEECCCCH
Q ss_conf 289768980344-656677988999999999986--378688722443688589999999984012888-5167416602
Q gi|254780486|r 26 LRRQDIWDFTSH-DYLALSSSTLLREKILSSLDS--KIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE-KMLYFGSGYA 101 (381)
Q Consensus 26 ~~~~~~l~f~s~-dYLGl~~~p~v~~a~~~a~~~--~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e-~al~~~sG~~ 101 (381)
++..++++|+|| |=+|. .|.++++..+++.. +|+ .+.+.+|.++||+++|.+ +-+++.+|-.
T Consensus 16 ~~~~~iidls~NeNP~g~--p~~v~~a~~~~~~~l~~YP------------d~~~~~Lr~aiA~~~gv~~~~I~~gnGs~ 81 (354)
T PRK06358 16 LTKNMILDFSANINPLGV--PESVKDAITENLDKLVEYP------------DIDYLELRKRIASFEQLDLENVILGNGAA 81 (354)
T ss_pred CCCCCEEECCCCCCCCCC--CHHHHHHHHHHHHHHCCCC------------CCCHHHHHHHHHHHHCCCHHHEEECCCHH
T ss_conf 694648886499989888--9999999999876610189------------99779999999998783879999868789
Q ss_pred HHH-HHHHHHCCCCCCCCHHHHCCHHHH-HHHHHCCCCCEEECCC---CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
Q ss_conf 456-556663168971004542026775-2666408764030568---81478997643100024786079714621576
Q gi|254780486|r 102 ANM-AILSTLPQATDLIVYDKLVHASIR-EGINSGKAQAIAIPHN---NINSFAENINKWRKSGGKGFPWIVVESIYSMD 176 (381)
Q Consensus 102 An~-~~i~~l~~~~d~ii~D~~~HaSi~-~g~~ls~a~~~~f~Hn---D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~ 176 (381)
--+ .++.++ .++.+++.+- . .+.+ ..++..+++++.++-. +.+-.+..+.... .+.+.+++.-.=. =+
T Consensus 82 e~i~~~~~~~-~~~~v~i~~P-t-f~~Y~~~~~~~g~~v~~~~l~~~~~~~~~~~~l~~~~---~~~~~v~l~nPnN-PT 154 (354)
T PRK06358 82 EVIFNIVRVL-KPKKVLILAP-T-FSEYERALKSVDAEVIYYELKEETNFAINEDVLEKIT---EEIDLIFLCNPNN-PT 154 (354)
T ss_pred HHHHHHHHHC-CCCEEEEECC-C-HHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCC---CCCCEEEEECCCC-CC
T ss_conf 9999999861-8996999798-8-7999999998498678997770038887999997445---5777899968999-86
Q ss_pred CCHHH---HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEEC-CCCCCC
Q ss_conf 61346---899999863136089861311222347776401100001346521001346565302---67524-510010
Q gi|254780486|r 177 GDKAP---LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGS-NKIIYD 249 (381)
Q Consensus 177 G~~ap---L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~-~~~ii~ 249 (381)
|.+.+ |.++++.|++++.++++|||+.--+...............+++|++.||||+||..| ||+.+ ++.+++
T Consensus 155 G~~~~~~~l~~l~~~~~~~~~~vviDEaY~ef~~~~~~~s~~~~~~~~~nlivlrSfSK~~glaGlRiGy~i~~~~~i~~ 234 (354)
T PRK06358 155 GQLISKEELKKILEKCEKKNIYVIIDEAFMDFVEENETISMIKYLENFKNLIIIRAFTKFFAIPGLRLGYGLCSNKNLIE 234 (354)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHCCCCCCCHHHHHHHCCCEEEEEECCHHHCCCCHHEEEEEECCHHHHH
T ss_conf 64067999999998720178799996405676368876667888752376689972516636766211565428799999
Q ss_pred CCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHCCC-CC---CCCCCEEEEEECCHHHH
Q ss_conf 00012110000135775025789887898862710224789999999987--64179-78---99897289995897999
Q gi|254780486|r 250 YLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKI--ANKKI-GF---SSQSHIQSIVIGDNKSC 323 (381)
Q Consensus 250 ~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~--~~~~~-g~---~~~s~I~~v~~gd~~~a 323 (381)
.++....+| +.+.....++.++++ +.+...+......+.++++ ....+ |+ ++.+..+.+.++++
T Consensus 235 ~l~~~~~p~----~vn~~a~~aa~aal~---d~~~~~~~~~~~~~~R~~l~~~L~~l~g~~v~ps~anFvl~~~~~~--- 304 (354)
T PRK06358 235 KLNQMREPW----SINTFADLAGRVLLE---DKNYIKKTIQWIKKEKEFLYNGLSEFKGLTVYEPSVNFIFFKLNKP--- 304 (354)
T ss_pred HHHHCCCCC----CHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEEECCH---
T ss_conf 998458998----826999999999952---9999999999999999999999874999688899848999983987---
Q ss_pred HHHHHHHHHCCEEEEEE-CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99999999779189862-2888888870399962878999999999999999988
Q gi|254780486|r 324 LNIAKNLQKKGFDIRAI-RPPTVPINTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 324 ~~~~~~L~~~Gi~v~~i-~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
.++.++|+++||+|++. .|+ +.+...+||++. |++|.++++++|+++++
T Consensus 305 ~~~~~~L~~~gIlVr~~~~f~--~l~~~~iRisvg---t~~en~~ll~aL~~iL~ 354 (354)
T PRK06358 305 IDLRKELLLKGILIRSCSNYR--GLDENYYRVAVK---SREDNKKLLEALSVILS 354 (354)
T ss_pred HHHHHHHHHCCCEEEECCCCC--CCCCCEEEEEEC---CHHHHHHHHHHHHHHHC
T ss_conf 999999985991999788778--889997999628---99999999999999749
No 106
>PRK03566 consensus
Probab=99.94 E-value=4.6e-24 Score=170.12 Aligned_cols=313 Identities=20% Similarity=0.247 Sum_probs=187.1
Q ss_pred CEEEECCCC-CCCCCCCCHHHHHHHHHHHHH--HCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC-EEEECCCC-HHH
Q ss_conf 768980344-656677988999999999986--3786887224436885899999999840128885-16741660-245
Q gi|254780486|r 29 QDIWDFTSH-DYLALSSSTLLREKILSSLDS--KIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEK-MLYFGSGY-AAN 103 (381)
Q Consensus 29 ~~~l~f~s~-dYLGl~~~p~v~~a~~~a~~~--~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~-al~~~sG~-~An 103 (381)
+++++|++| |=+|. .|.+.+++.+++.. +|+- ....+|=++||+++|.+. -+++.+|- .+-
T Consensus 32 ~~~i~l~~NeNp~gp--~~~v~~a~~~~~~~~~~YPd------------~~~~~Lr~aiA~~~gv~~~~I~v~~Gs~e~i 97 (365)
T PRK03566 32 SDIVKLASNENPLGP--SPKALEAIRAALSELHRYPD------------GNGFELKAALAEKLGVPPEQITLGNGSNDLL 97 (365)
T ss_pred CCEEEEECCCCCCCC--CHHHHHHHHHHHHHCCCCCC------------CCHHHHHHHHHHHHCCCHHHEEECCCHHHHH
T ss_conf 887882188999898--99999999998886166959------------6689999999999784866799877899999
Q ss_pred HHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCC----CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCH
Q ss_conf 65566631689710045420267752666408764030568----81478997643100024786079714621576613
Q gi|254780486|r 104 MAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHN----NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDK 179 (381)
Q Consensus 104 ~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~Hn----D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ 179 (381)
..++.++++++|.|+...=.=..-...+++.+++++.++-+ |++++.+.+ . ++.+.+++...=. =+|.+
T Consensus 98 ~l~~~a~~~pGd~Vl~~~P~y~~Y~~~~~~~g~~~~~vp~~~~~~dl~~l~~~i---~---~~~klv~l~nPnN-PTG~~ 170 (365)
T PRK03566 98 ELLARAFLGPGDEIIYSQYAFAVYPLATQAVGARAVEVPAKDYGHDLEAMLAAI---T---PKTRLVFIANPNN-PTGTF 170 (365)
T ss_pred HHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHC---C---CCCCEEEECCCCC-CCCCC
T ss_conf 999998558998767668866899999998197489961767676958899863---8---8886899779999-88773
Q ss_pred HHHHHHHH---HHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCC
Q ss_conf 46899999---863136089861311222347776401100001346521001346565302---675245100100001
Q gi|254780486|r 180 APLDDLVK---IANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLIN 253 (381)
Q Consensus 180 apL~~i~~---l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~ 253 (381)
-+-+++.+ .+.+ +.++++||++.--+.+..-.......+..+++|+++||||+||..| ||+++++++++.+..
T Consensus 171 ~~~~~l~~l~~~~~~-~~~vV~DEaY~ef~~~~~~~~~~~~~~~~~n~iv~rSfSK~~glaGlRiGy~ia~~~li~~l~~ 249 (365)
T PRK03566 171 LSAAELEAFLAKVPP-DVLVVLDEAYTEYAAPEERPDSLAWLKKYPNLVVSRTFSKAYGLAGLRVGYAVSNPEIADLLNR 249 (365)
T ss_pred CCCHHHHHHHHHCCC-CCEEEEECCHHHHCCCCCCCCHHHHHHHCCCEEEEEECCHHCCCCCHHHEEEECCHHHHHHHHH
T ss_conf 570658999975456-7449852457775047777778887641377259854545205757301410169999999999
Q ss_pred CCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHCCCCC---CCCCCEEEEEECCHHHHHHHHH
Q ss_conf 2110000135775025789887898862710224789999999987--6417978---9989728999589799999999
Q gi|254780486|r 254 YAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKI--ANKKIGF---SSQSHIQSIVIGDNKSCLNIAK 328 (381)
Q Consensus 254 ~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~--~~~~~g~---~~~s~I~~v~~gd~~~a~~~~~ 328 (381)
...+| ..+.+...++.++|+ +...+++......+.++++ ....+|+ ++.+..+-+.++. .+.++++
T Consensus 250 ~~~p~----~vn~~aq~aa~aaL~---~~~~~~~~~~~~~~~r~~l~~~L~~~g~~~~ps~~nF~l~~~~~--~~~~l~~ 320 (365)
T PRK03566 250 VRQPF----NVNSLALAAAVAALD---DDDFLAKSRELNRAGMQQLEAGFDALGLEYIPSKGNFVTVDVGR--DAAAIYQ 320 (365)
T ss_pred HCCCC----CCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEECCC--CHHHHHH
T ss_conf 61888----977999999999958---99999999999998999999999978798878998089997899--9999999
Q ss_pred HHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99977918986228888888703999628789999999999999999887
Q gi|254780486|r 329 NLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 329 ~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
+|+++||+|.+..-.-. ...+||++. |++|.++++++|+++++|
T Consensus 321 ~L~~~gV~Vrp~~~fgl---~~~lRis~g---~~een~~l~~aL~~il~e 364 (365)
T PRK03566 321 ALLRQGVIVRPVAGYGM---PNHLRVSIG---LPEENARFLAALKKVLAE 364 (365)
T ss_pred HHHHCCEEEEECCCCCC---CCEEEEEEC---CHHHHHHHHHHHHHHHCC
T ss_conf 99977918986898999---897999958---999999999999998766
No 107
>KOG1404 consensus
Probab=99.94 E-value=1.1e-24 Score=173.91 Aligned_cols=339 Identities=17% Similarity=0.157 Sum_probs=214.6
Q ss_pred HHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCC------CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 99999999975983999289768980344656677------988999999999986378688722443688589999999
Q gi|254780486|r 9 YEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALS------SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEE 82 (381)
Q Consensus 9 ~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~------~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~ 82 (381)
|.+-|...+++|-|..+-+|+++|||-+ |+. .||+|++++.+++.+.|.+.+ ..-+.++++-.|+
T Consensus 30 ~~~Pl~Iv~~~~~ylyDe~G~ryLD~f~----Gi~tvslGHchP~v~~a~~kQl~~l~H~t~-----~~~~~pi~~~Ae~ 100 (442)
T KOG1404 30 YKKPLVIVRGEGQYLYDEEGRRYLDAFG----GIVTVSLGHCHPDVVAAAVKQLKKLYHTTS-----GYLNPPIHDLAEA 100 (442)
T ss_pred CCCCCEEEECCEEEEECCCCCEEEHHHC----CEEEEECCCCCHHHHHHHHHHHHHHEEEEC-----CCCCCCHHHHHHH
T ss_conf 6688557844267998688865002208----748997378884789999986453287301-----2148708999999
Q ss_pred HHHHHCC-CCCEEEECCCCHHHHHHHH---HHCCCCCCCCHHHHCCHHHHHHHHHCC--CCCEEECCC------------
Q ss_conf 9840128-8851674166024565566---631689710045420267752666408--764030568------------
Q gi|254780486|r 83 EAADFFG-FEKMLYFGSGYAANMAILS---TLPQATDLIVYDKLVHASIREGINSGK--AQAIAIPHN------------ 144 (381)
Q Consensus 83 ~lA~~~g-~e~al~~~sG~~An~~~i~---~l~~~~d~ii~D~~~HaSi~~g~~ls~--a~~~~f~Hn------------ 144 (381)
.++.|-+ ...+++.|||..||..++. .+.+.-|.|=.-...|.+-...+-+.+ ..+..|+++
T Consensus 101 L~s~~P~~l~~vfF~nsGsEANelal~mar~Yt~~~diIa~r~~YHG~t~~t~glt~~~~~k~~~~~~~~~~~~~~~Pdp 180 (442)
T KOG1404 101 LVSKLPGDLKVVFFVNSGSEANELALKMARLYTGNLDIIARRNSYHGNTLYTLGLTGLSPWKQNFPGVASGVHHTMNPDP 180 (442)
T ss_pred HHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 99868877128999558745889999999986297158875055367735530244677645567888776512689983
Q ss_pred -------C---------HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCC
Q ss_conf -------8---------147899764310002478607971462157661346----89999986313608986131122
Q gi|254780486|r 145 -------N---------INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHAT 204 (381)
Q Consensus 145 -------D---------~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~ 204 (381)
+ .++|++.+.. ..+.....-+.|+|-+..|.+.+ |++..++|++||.++|.||+++
T Consensus 181 ~r~~~~~~~~~e~~d~~a~~l~d~i~~---~~~~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqt- 256 (442)
T KOG1404 181 YRGIFGGSNEEEASDRYAKELEDLILY---DGPETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQT- 256 (442)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHH---CCCCCEEEEEEEHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEHHHHH-
T ss_conf 115679973245688888877788873---5877514787530016775313881189999999997597898543443-
Q ss_pred CCCCCCCC-EEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf 23477764-01100001346521001346565302---675245100100001211000013577502578988789886
Q gi|254780486|r 205 GVCGPLGK-GLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIK 280 (381)
Q Consensus 205 Gv~G~~G~-G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~ 280 (381)
| +||+|. .-++..++.|+++ |++|++|. | |.|..+++|.+.+.+++. +-+|-+.+|..+++++++|++++
T Consensus 257 G-fGRtG~~wgfe~h~v~PDIv---TmAKgiGn-G~Pl~AVvtt~EIa~v~~~~~~-~fnTyggnP~a~avg~aVL~Vik 330 (442)
T KOG1404 257 G-FGRTGHMWGFESHGVVPDIV---TMAKGIGN-GFPLGAVVTTPEIADVLNQKSS-HFNTYGGNPVACAVGLAVLKVIK 330 (442)
T ss_pred C-CCCCCCCCCCCCCCCCCCHH---HHHHHCCC-CCCCEEEECCHHHHHHHHHCCC-CCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 6-45552510100168772099---99865248-8700256327899999985213-52033788256788899999998
Q ss_pred HCCCHHHHHHHHHHHHH-HHHHCCCC------CCCCCCEEEEEECC---------HHHHHHHHHHHHHCCEEEEEECCCC
Q ss_conf 27102247899999999-87641797------89989728999589---------7999999999997791898622888
Q gi|254780486|r 281 RKPALHKSLLQLINITD-KIANKKIG------FSSQSHIQSIVIGD---------NKSCLNIAKNLQKKGFDIRAIRPPT 344 (381)
Q Consensus 281 ~~~~~~~~l~~~~~~~~-~~~~~~~g------~~~~s~I~~v~~gd---------~~~a~~~~~~L~~~Gi~v~~i~~Pt 344 (381)
++ .++++..+...++. ++...+-. ..+..-++.+.+-+ ......+.+.+.+.|++|.....
T Consensus 331 ee-~LqE~aa~vG~yl~~~l~~l~d~h~iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i-- 407 (442)
T KOG1404 331 EE-NLQENAAEVGSYLLEKLAALKDKHPIIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGI-- 407 (442)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCEEEECCCC--
T ss_conf 87-678889999999999999874148735521354148888872266778894067788998998974856410423--
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 8888703999628789999999999999
Q gi|254780486|r 345 VPINTARLRISITLNVDEPTIVKLFDIL 372 (381)
Q Consensus 345 Vp~~~~rlRi~v~a~~t~edi~~~~~~l 372 (381)
.|. -+||.++...|+|||+.+++.+
T Consensus 408 --~G~-vfriaPPlciT~edi~f~~~~~ 432 (442)
T KOG1404 408 --HGN-VFRIAPPLCITKEDIDFAVEYF 432 (442)
T ss_pred --CCE-EEEECCCEECCHHHHHHHHHHH
T ss_conf --231-7983698543489988999999
No 108
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1.5e-23 Score=167.02 Aligned_cols=338 Identities=14% Similarity=0.187 Sum_probs=212.5
Q ss_pred CCCCHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCC-CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHH
Q ss_conf 988657899999999997598399928976898034465-6677988999999999986378688722443688589999
Q gi|254780486|r 1 MKNIQMSFYEERLQKIKSKGRHRQLLRRQDIWDFTSHDY-LALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLE 79 (381)
Q Consensus 1 m~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dY-LGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~ 79 (381)
|++- -.++..++...+. | ..-+....+.+++|-= +|. .|.+.++..+++.. ..+ .| + ..+.+.+
T Consensus 3 ~~~~-~~~ir~~i~~~~~---Y-~~~~~~~~ikL~~NEnp~g~--~~~v~~ai~~~~~~-~~l----nr--Y-Pd~~~~~ 67 (356)
T PRK04870 3 MTTP-ARIIRPDVLAMSA---Y-HVPDAAGFVKLDAMENPYPL--PAELQAELGERLAE-VAL----NR--Y-PDPRAAA 67 (356)
T ss_pred CCCH-HHHHHHHHHCCCC---C-CCCCCCCCEEEECCCCCCCC--CHHHHHHHHHHHHC-CCC----CC--C-CCCCHHH
T ss_conf 6886-8985488745899---8-99999998883278899998--99999999997512-243----77--9-8998999
Q ss_pred HHHHHHHHCCC-CC-EEEECCCCHHHH-HHHHHHCCCCCCCCHHHHCCHHHH-HHHHHCCCCCEEECCC-CHH-HHHHHH
Q ss_conf 99998401288-85-167416602456-556663168971004542026775-2666408764030568-814-789976
Q gi|254780486|r 80 LEEEAADFFGF-EK-MLYFGSGYAANM-AILSTLPQATDLIVYDKLVHASIR-EGINSGKAQAIAIPHN-NIN-SFAENI 153 (381)
Q Consensus 80 lE~~lA~~~g~-e~-al~~~sG~~An~-~~i~~l~~~~d~ii~D~~~HaSi~-~g~~ls~a~~~~f~Hn-D~~-~Le~~l 153 (381)
|-++||+++|. ++ -+++.+|-.--+ .++.++++++|.|+.-.- -.+++ ..++..+++++.++-+ |.. |++..+
T Consensus 68 Lr~~lA~~~gv~~~~~Ii~GnGSdElI~~i~~~~~~pgd~vl~~~P-tf~~Y~~~a~~~g~~~~~vpl~~d~~~d~~~~~ 146 (356)
T PRK04870 68 LKAALRAAMGVPAGADVLLGNGSDELIQLIALACAKPGAKVLAPVP-GFVMYRMSAKFAGLEFVGVPLTADFTLDLPAML 146 (356)
T ss_pred HHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHHHCCCCEEEECCC-CHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHH
T ss_conf 9999999868798776998167999999999998189898997677-766899999982987999846876562128899
Q ss_pred HHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCC
Q ss_conf 43100024786079714621576613468999998631360898613112223477764011000013465210013465
Q gi|254780486|r 154 NKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKA 233 (381)
Q Consensus 154 ~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa 233 (381)
...... + ..+|++..=..=+|.+.+.++|.+++++.+.++++|||+.- +.++ .........+++|++.||||
T Consensus 147 ~~i~~~--~-~klv~i~nPNNPTG~~~~~~~l~~l~~~~~~lvVvDEAY~e-F~~~---s~~~~~~~~~nlivlRTfSK- 218 (356)
T PRK04870 147 AAIAEH--R-PALVYLAYPNNPTGNLFDDADVEAIIAAAPGLVVIDEAYQP-FAGR---SWLPRAAEFPNVLVMRTVSK- 218 (356)
T ss_pred HHHCCC--C-CCEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCHH-HCCC---CCCHHHHCCCCEEEEECCCC-
T ss_conf 874146--8-73899768999766336878899998506986552254075-5678---62101203796899860541-
Q ss_pred CCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHCCC-C--
Q ss_conf 65302---6752451001000012110000135775025789887898862710224789999999987--64179-7--
Q gi|254780486|r 234 LGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKI--ANKKI-G-- 305 (381)
Q Consensus 234 ~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~--~~~~~-g-- 305 (381)
||..| ||+.+++++++.+.....+| ..+-...+++.++|+ +.+.+.+....+...++++ ....+ |
T Consensus 219 ~glaGlRvGy~ia~~~~i~~l~k~~~p~----~vn~~a~~aa~~aL~---d~~~~~~~~~~~~~~R~~l~~~L~~l~g~~ 291 (356)
T PRK04870 219 LGLAGLRLGYLAGHPAWIAELDKVRPPY----NVNVLTQATALFALE---HVDVLDAQAAELRAERTRLAAALAALPGVT 291 (356)
T ss_pred CCCCCCCEEEEEECHHHHHHHHHHCCCC----CCHHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 0136566277750999999997734898----733999999999974---958899999999999999999998369978
Q ss_pred -CCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf -89989728999589799999999999779189862288888887039996287899999999999999998
Q gi|254780486|r 306 -FSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 306 -~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
+++.++.+.+.+++ +..+.++|+++||+|+...- .-|.....+||++. |++|.++++++|++++
T Consensus 292 v~pS~aNFil~~~~~---a~~l~~~L~~~gIlVR~~~~-~~~~~~~~lRIsig---t~een~~ll~aLk~~L 356 (356)
T PRK04870 292 VFPSAANFILVRVPD---AAAVFDGLKTRRVLVKNVSG-MHPLLANCLRVTVG---SPEENAQFLAALKLAL 356 (356)
T ss_pred ECCCCCEEEEEECCC---HHHHHHHHHHCCEEEEECCC-CCCCCCCEEEEECC---CHHHHHHHHHHHHHHC
T ss_conf 889988089998899---99999999969909998898-88889998999839---9999999999999859
No 109
>PRK04152 consensus
Probab=99.94 E-value=6e-24 Score=169.42 Aligned_cols=320 Identities=18% Similarity=0.208 Sum_probs=193.6
Q ss_pred CCCCEEEECCCCCC-CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CEEEECCCCH-H
Q ss_conf 28976898034465-6677988999999999986378688722443688589999999984012888-5167416602-4
Q gi|254780486|r 26 LRRQDIWDFTSHDY-LALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE-KMLYFGSGYA-A 102 (381)
Q Consensus 26 ~~~~~~l~f~s~dY-LGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e-~al~~~sG~~-A 102 (381)
++.+++++|++|-= +|. .|.+.++..+++.. . .| + ..+.+.+|-+++|+++|.+ +-+++..|-. +
T Consensus 28 ~~p~~ii~ls~NeNP~g~--p~~~~~ai~~~~~~-~------~~--Y-Pd~~~~~Lr~~iA~~~gv~~~~I~vgnGs~e~ 95 (364)
T PRK04152 28 IDPKDVIKLASNENPFGT--SPKVIEAIRKNASK-A------HL--Y-PDDSMFELKSALASKFDVESENIIIGAGSDQV 95 (364)
T ss_pred CCCCCEEEECCCCCCCCC--CHHHHHHHHHHHHH-C------CC--C-CCCCHHHHHHHHHHHHCCCHHEEEECCCHHHH
T ss_conf 681247881799999999--99999999987873-7------67--9-99679999999999869583009985699999
Q ss_pred HHHHHHHHCCCCCCCCHHHHCCHHHH-HHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH
Q ss_conf 56556663168971004542026775-26664087640305688147899764310002478607971462157661346
Q gi|254780486|r 103 NMAILSTLPQATDLIVYDKLVHASIR-EGINSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP 181 (381)
Q Consensus 103 n~~~i~~l~~~~d~ii~D~~~HaSi~-~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap 181 (381)
-..++.++.+++|.|+.-.=. .+.+ ..+++.+++++..+- +-.+++..+...... +.+ +|++-.=--=+|.+.+
T Consensus 96 i~~~~~~~~~~g~~vl~~~Pt-f~~Y~~~a~~~g~~v~~~~~-~~~dl~~~~~~~~~~--~~~-lv~l~nPNNPTG~~~~ 170 (364)
T PRK04152 96 IEFAIHAKLNEKSSVLMAGVT-FAMYEIYAKQCGAKIYKTQS-VEHDLNEFLELYKSH--KPK-IIFLCLPNNPLGECLD 170 (364)
T ss_pred HHHHHHHHHCCCCEEEECCCC-HHHHHHHHHHCCCEEEECCC-CCCCHHHHHHHHHCC--CCC-EEEECCCCCCCCCCCC
T ss_conf 999999983899844658987-26899999983987996687-433989999986377--985-8998799998672466
Q ss_pred HHHHHHHHHH--CCEEEEECCCCC-CCCCCCCCCEE--EEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCC
Q ss_conf 8999998631--360898613112-22347776401--100001346521001346565302---675245100100001
Q gi|254780486|r 182 LDDLVKIAND--YDGFIVVDEAHA-TGVCGPLGKGL--THIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLIN 253 (381)
Q Consensus 182 L~~i~~l~~~--y~~~LivDEah~-~Gv~G~~G~G~--~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~ 253 (381)
..++.++++. .+.++++|||+. |.........+ .+.....+++|++.||||+||..| ||+.+++++++.++.
T Consensus 171 ~~~l~~~~~~~~~~~~vvvDEAY~ef~~~~~~~~~~~~~~l~~~~~nlivlrsfSK~~glaGlRlGy~ia~~~~i~~l~k 250 (364)
T PRK04152 171 ASEVYKFIKGIDEDTLVVIDAAYMEFAKFKDSKKHIEPKELIKLFPNVIYLGTFSKAYGLGGMRVGYGIANAEIISALYK 250 (364)
T ss_pred CCCHHHHHHHCCCCCEEEEEHHHHHHHHCCCCCCCCCHHHHHHHCCCEEEEECCHHHCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 51249999754557768741677888603775345588998742797899832605237877735201389999999998
Q ss_pred CCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHCCCCC---CCCCCEEEEEECCHHHHHHHHH
Q ss_conf 2110000135775025789887898862710224789999999987--6417978---9989728999589799999999
Q gi|254780486|r 254 YAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKI--ANKKIGF---SSQSHIQSIVIGDNKSCLNIAK 328 (381)
Q Consensus 254 ~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~--~~~~~g~---~~~s~I~~v~~gd~~~a~~~~~ 328 (381)
...+| +.+.....++.++|+ +++...+.+....+.+.++ .....|+ ++.+..+.+.+.+...+.++.+
T Consensus 251 ~~~p~----~vn~~a~~aa~~aL~---~~~~~~~~~~~~~~er~~~~~~~~~~g~~~~ps~aNFil~~~~~~~~a~~l~~ 323 (364)
T PRK04152 251 LRPPF----NVTTLSLKAAIEALK---DEEFVEKTLENNFKEMKRYEEFAKEQGIEFIDSYTNFITFFFDERKNSTEISQ 323 (364)
T ss_pred HCCCC----CCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEECCCCCCHHHHHH
T ss_conf 53898----867999999999937---99999999999999999999998858884899988789898999999999999
Q ss_pred HHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 999779189862288888887039996287899999999999999998
Q gi|254780486|r 329 NLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 329 ~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
+|+++||+|+.... .|...+||++. |++|.++++++|++++
T Consensus 324 ~L~~~gI~VR~~~~----~g~~~iRIsvg---~~een~~li~aL~~vL 364 (364)
T PRK04152 324 KLLKKGIIVRNLKS----YGLNAIRITIG---TPEQNDRVFEELDKEL 364 (364)
T ss_pred HHHHCCEEEEECCC----CCCCEEEEECC---CHHHHHHHHHHHHHHC
T ss_conf 99968919985798----99697999739---9999999999999759
No 110
>KOG1401 consensus
Probab=99.93 E-value=3.1e-23 Score=164.97 Aligned_cols=324 Identities=21% Similarity=0.288 Sum_probs=210.2
Q ss_pred CCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC---CCCCE
Q ss_conf 983999289768980344---656677988999999999986378688722443688589999999984012---88851
Q gi|254780486|r 20 GRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF---GFEKM 93 (381)
Q Consensus 20 g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~---g~e~a 93 (381)
|....+.+|++|+||+|- .-+|-+ ||++.+++.++.. +++.++.+ +++..-.+||+.|.+.. ..+.+
T Consensus 47 g~kl~D~~g~EyiD~~ssw~~~~~Gha-npev~ral~~q~~-k~~hs~~~-----~~t~eav~l~~~l~~~~~~~~~~rv 119 (433)
T KOG1401 47 GSKLFDPDGKEYIDFTSSWAVTILGHA-NPEVARALAEQAK-KLGHSSNG-----YFTLEAVELEEVLSAVLGKGSAERV 119 (433)
T ss_pred EEEEECCCCCEEEEECCCHHCCCCCCC-CHHHHHHHHHHHH-HHEEECCC-----CCCHHHHHHHHHHHHCCCCCCCCEE
T ss_conf 346426886644130011001355889-9899999999875-53440475-----3208889999999742356874179
Q ss_pred EEECCCCHHHHHHHHHHCC----CC----C-CCCHHHHCCHHHHHHH---------HHCC----CCCEEECCCCHHHHHH
Q ss_conf 6741660245655666316----89----7-1004542026775266---------6408----7640305688147899
Q gi|254780486|r 94 LYFGSGYAANMAILSTLPQ----AT----D-LIVYDKLVHASIREGI---------NSGK----AQAIAIPHNNINSFAE 151 (381)
Q Consensus 94 l~~~sG~~An~~~i~~l~~----~~----d-~ii~D~~~HaSi~~g~---------~ls~----a~~~~f~HnD~~~Le~ 151 (381)
.+++||+.||.+++..--+ ++ . .|-..-.-|.--. |+ ++-. -.+..+..||+.+|++
T Consensus 120 ff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tl-gals~~~~s~y~~~~~p~~p~v~~~~ynd~t~l~k 198 (433)
T KOG1401 120 FFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTL-GALSVTGNSKYGLPFDPIAPDVVTAEYNDSTALEK 198 (433)
T ss_pred EEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCH-HHHHHHCCCCCCCCCCCCCCCEEEECCCCHHHHHH
T ss_conf 99569728999999999986353477664128998567577623-66675234666888877798535305588999999
Q ss_pred HHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCC-EEEEEHHCCCCCCC
Q ss_conf 764310002478607971462157661346----8999998631360898613112223477764-01100001346521
Q gi|254780486|r 152 NINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGK-GLTHIIEERNNVIV 226 (381)
Q Consensus 152 ~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~-G~~~~~~~~~~~iv 226 (381)
+++.+.. ...-|++|.|-.-.|-+++ |..|+.+|+++|+++|+||++ +| +||.|. ++.+++++.|+++
T Consensus 199 ~~e~~~~----~IaAvIvEPiqGaGG~~p~~peFl~~l~k~C~~~~vl~I~DEV~-tG-~gR~g~~~a~e~~~~~PDI~- 271 (433)
T KOG1401 199 LFESHKG----EIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQ-TG-LGRLGYGWAQEYFGVTPDIT- 271 (433)
T ss_pred HHHHCCC----CEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHH-HC-CCCCCHHHHHHHHCCCCCEE-
T ss_conf 9984788----56899971345788865698899999999986159669960343-17-65355277888858697602-
Q ss_pred CCCCCCCCCCEE---EEEECCCCCCCCCCCC-----CCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 001346565302---6752451001000012-----11000013577502578988789886271022478999999998
Q gi|254780486|r 227 MHSCSKALGSSG---ALVGSNKIIYDYLINY-----AKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDK 298 (381)
Q Consensus 227 ~~TlsKa~g~~G---G~i~~~~~ii~~l~~~-----~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~ 298 (381)
|++|.+|+ | |.+.++.++.+.+..- +++| +.+|+.|.++.++++.+. +|+..+++....+.+.+
T Consensus 272 --t~aK~L~g-GlPigA~~v~~kV~~~i~~~~~l~hg~Tf----~gnpLacs~~~~~l~~l~-~pe~~k~vs~~~k~L~~ 343 (433)
T KOG1401 272 --TVAKPLGG-GLPIGATGVRDKVAEMISPGDHLYHGGTF----SGNPLACSAGIKVLDELK-DPETLKNVSKIGKELRK 343 (433)
T ss_pred --EEHHHCCC-CCEEEEEEEHHHHHHHCCCCCCCCCCCCC----CCCHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHH
T ss_conf --31020368-85157886557788651888865557665----788055548899999871-88999989888789999
Q ss_pred HHHCCCCCCCCCCEEE-----EEE-----C------CHH-----HHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECC
Q ss_conf 7641797899897289-----995-----8------979-----999999999977918986228888888703999628
Q gi|254780486|r 299 IANKKIGFSSQSHIQS-----IVI-----G------DNK-----SCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISIT 357 (381)
Q Consensus 299 ~~~~~~g~~~~s~I~~-----v~~-----g------d~~-----~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~ 357 (381)
.....+.-. ...|.. +++ + |+. ....+...+++.|+++.|+ | .++
T Consensus 344 ~l~e~~~~~-~~~i~g~~grgl~ig~~~~~p~~~~~d~~~~~~ll~~~~~~~~~~~gv~i~P~-~------------~l~ 409 (433)
T KOG1401 344 LLDEYLKKT-PNSICGGVGRGLVIGFEFEGPVYKFADAAREQGLLILTLGKGLLEEGVRIAPI-Y------------LLT 409 (433)
T ss_pred HHHHHHCCC-CCCEEEEEEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC-C------------CCC
T ss_conf 999986479-87436775258899899830505430134455688887632462251799555-2------------010
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 78999999999999999988738
Q gi|254780486|r 358 LNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 358 a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
-.||+|.|+++++++.++++++|
T Consensus 410 ~~~~~E~i~~~l~i~~k~l~~l~ 432 (433)
T KOG1401 410 VEHTPEVIQRLLTILEKVLSALN 432 (433)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 56868999999999999998742
No 111
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.1e-23 Score=167.74 Aligned_cols=314 Identities=17% Similarity=0.194 Sum_probs=188.9
Q ss_pred CEEEECCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CEEEECCCCH-HHHH
Q ss_conf 768980344-656677988999999999986378688722443688589999999984012888-5167416602-4565
Q gi|254780486|r 29 QDIWDFTSH-DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE-KMLYFGSGYA-ANMA 105 (381)
Q Consensus 29 ~~~l~f~s~-dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e-~al~~~sG~~-An~~ 105 (381)
+++++|++| |=+|. .|.++++..++++ ... | + ....+.+|-++||+++|.+ +-+++.+|.. +-..
T Consensus 29 ~~ii~ls~Nenp~g~--~~~v~~a~~~~~~-~~~------~--Y-Pd~~~~~Lr~~iA~~~gv~~~~I~v~nGs~e~i~~ 96 (359)
T PRK03158 29 SKIVKLASNENPFGC--SPRVTEALASEAS-QYA------L--Y-PDGYAFELRTKVAKHLGVKEEQLIFGNGSDEVIQI 96 (359)
T ss_pred CCEEEEECCCCCCCC--CHHHHHHHHHHHH-HCC------C--C-CCCCHHHHHHHHHHHHCCCHHHEEECCCHHHHHHH
T ss_conf 976895089999999--9999999998787-367------6--9-69888999999999868486779984788999999
Q ss_pred HHHHHCCCCCCCCH-HHHCCHHHH-HHHHHCCCCCEEECCCC-HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHH
Q ss_conf 56663168971004-542026775-26664087640305688-1478997643100024786079714621576613468
Q gi|254780486|r 106 ILSTLPQATDLIVY-DKLVHASIR-EGINSGKAQAIAIPHNN-INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPL 182 (381)
Q Consensus 106 ~i~~l~~~~d~ii~-D~~~HaSi~-~g~~ls~a~~~~f~HnD-~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL 182 (381)
++.++++++|.|+. +-. .+.+ ..+++.+++++.++-.| ..+++..++.... +.+ +|++-.=-.=+|.+.+.
T Consensus 97 ~~~~~~~~g~~vvi~~P~--f~~Y~~~a~~~g~~~~~vpl~d~~~dl~~~~~~i~~---~tk-lv~l~nPnNPTG~~~~~ 170 (359)
T PRK03158 97 ISRALLHEGTNTVMANPT--FSQYRHNAVIEGAEVREVPLKDGIHDLDAMLEAIDE---NTK-IVWICNPNNPTGTYVEK 170 (359)
T ss_pred HHHHHHCCCCEEECCCCE--EEHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHCCC---CCC-EEEECCCCCCCCCCCCC
T ss_conf 999980799811137982--055599997628537996267776699999975075---887-89974899998887652
Q ss_pred HH---HHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCC
Q ss_conf 99---999863136089861311222347776401100001346521001346565302---675245100100001211
Q gi|254780486|r 183 DD---LVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAK 256 (381)
Q Consensus 183 ~~---i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~ 256 (381)
++ +++.+.+ +.++++|||+.--+..+............+++|++.||||+||..| ||+++++++++.++..-.
T Consensus 171 ~~l~~l~~~~~~-~~~vvvDEaY~ef~~~~~~~~~~~l~~~~~nviv~rsfSK~~~laGlRlGy~ia~~~li~~l~~~~~ 249 (359)
T PRK03158 171 QKLLAFLEKVPK-SVLVVLDEAYYEYVTAEDYPQTLPLLEKYENLMILRTFSKAYGLAALRVGYGIADEELIGQLEPARL 249 (359)
T ss_pred HHHHHHHHHCCC-CEEEEEEHHHHHHHCCCCCCCHHHHHHHCCCEEEECCCCHHCCCCCCCCEECCCCHHHHHHHHHHCC
T ss_conf 348999974857-7299972278887325786203567653256236515654106888852203189999999998538
Q ss_pred CEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHCCCCC---CCCCCEEEEEECCHHHHHHHHHHHH
Q ss_conf 0000135775025789887898862710224789999999987--6417978---9989728999589799999999999
Q gi|254780486|r 257 PFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKI--ANKKIGF---SSQSHIQSIVIGDNKSCLNIAKNLQ 331 (381)
Q Consensus 257 ~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~--~~~~~g~---~~~s~I~~v~~gd~~~a~~~~~~L~ 331 (381)
+| +.+....+++.++++ ++....+....+.+.++++ .....|+ ++.+..+-+.++ ..+.+++++|+
T Consensus 250 ~~----~v~~~aq~aa~aal~---d~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~ps~anF~l~~~~--~~~~~~~~~L~ 320 (359)
T PRK03158 250 PF----NTSTIAQAAALAALE---DQAFIQECVKKNAEGLKQYYAFCKEYGVFYYPSQTNFVLIDLG--IPGDEVFEYLL 320 (359)
T ss_pred CC----CCHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEECC--CCHHHHHHHHH
T ss_conf 86----856999999999957---9999999999999999999999986888899998508998689--99999999998
Q ss_pred HCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 779189862288888887039996287899999999999999998
Q gi|254780486|r 332 KKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 332 ~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
++||+|++....-. ...+||++. |++|.++++++|++++
T Consensus 321 ~~gi~Vr~g~~fg~---~~~iRIsvg---t~~en~~ll~aL~~il 359 (359)
T PRK03158 321 KKGYIVRSGAALGF---PTGIRITVG---LKEENDEIIELLAELL 359 (359)
T ss_pred HCCEEEEECCCCCC---CCEEEEEEC---CHHHHHHHHHHHHHHC
T ss_conf 19939996898999---898999948---9999999999999869
No 112
>PRK03321 putative aminotransferase; Provisional
Probab=99.93 E-value=9.7e-24 Score=168.12 Aligned_cols=316 Identities=16% Similarity=0.214 Sum_probs=188.7
Q ss_pred CCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CEEEECCCCHHH-HH
Q ss_conf 9768980344656677988999999999986378688722443688589999999984012888-516741660245-65
Q gi|254780486|r 28 RQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE-KMLYFGSGYAAN-MA 105 (381)
Q Consensus 28 ~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e-~al~~~sG~~An-~~ 105 (381)
-.+.++|++|-- -+.-.|.+.++..++++. . +| + ..+-+.+|-++||+++|.+ +-+++.+|...- ..
T Consensus 21 ~~~~i~ls~Nen-p~gp~p~v~~ai~~~~~~-~------~~--Y-Pd~~~~~Lr~aiA~~~~v~~~~I~v~nGs~e~i~~ 89 (352)
T PRK03321 21 VPGAIKLSSNET-PFGPLPSVRAAIAEATDG-L------NR--Y-PDNGAVELRAALAEHLGVAPEHVAVGCGSVALCQQ 89 (352)
T ss_pred CCCCEECCCCCC-CCCCCHHHHHHHHHHHHH-C------CC--C-CCCCHHHHHHHHHHHHCCCHHHEEECCCHHHHHHH
T ss_conf 999378029699-999889999999986530-6------77--9-89986999999999878785879987469999999
Q ss_pred HHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCC--CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHH
Q ss_conf 566631689710045420267752666408764030568--814789976431000247860797146215766134689
Q gi|254780486|r 106 ILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHN--NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLD 183 (381)
Q Consensus 106 ~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~Hn--D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~ 183 (381)
++.+++.++|.|+.-.-.-..-...+++.+++.+.++-. .--+++..+..... +.+.+++.-.= .=+|.+.+..
T Consensus 90 ~~~~~~~~gd~Vl~p~P~f~~Y~~~~~~~G~~~~~v~l~~~~~~dl~~l~~~i~~---~~~lv~l~nPn-NPTG~~~~~~ 165 (352)
T PRK03321 90 LVQATAGPGDEVVFAWRSFEAYPILVQVAGATPVQVPLTDDHTHDLDAMAAAITD---RTRLIFVCNPN-NPTGTVVTPA 165 (352)
T ss_pred HHHHHHCCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCCC---CCCEEEECCCC-CCCCCCCCCH
T ss_conf 9999817979899888853268999998098799986675557883789986588---87589984999-9730136837
Q ss_pred HHHHHHHH--CCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCE
Q ss_conf 99998631--36089861311222347776401100001346521001346565302---67524510010000121100
Q gi|254780486|r 184 DLVKIAND--YDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPF 258 (381)
Q Consensus 184 ~i~~l~~~--y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ 258 (381)
++.++++. .++++++|||+.--+.+..-..........+++|++.||||+||..| ||+++++++++.++....+|
T Consensus 166 ~l~~l~~~~~~~~~vvvDEaY~~f~~~~~~~~~~~~~~~~~nlivlrSfSK~~glaGlRlGy~ia~~~~i~~l~~~~~p~ 245 (352)
T PRK03321 166 ALARFVAAVPADVLVVLDEAYVEYIRDGDVPDGLELVRDHPNVVVLRTFSKAYGLAGLRVGYAVGHPEVITALRKVAVPF 245 (352)
T ss_pred HHHHHHHHCCCCCEEEEHHHHHHHHHCCCCCCHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEECCHHHHHHHHHHCCCC
T ss_conf 58999975547847972240898842778762788752045255402544133789885332028999999999845898
Q ss_pred ECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHCCCCC---CCCCCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 00135775025789887898862710224789999999987--6417978---998972899958979999999999977
Q gi|254780486|r 259 IYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKI--ANKKIGF---SSQSHIQSIVIGDNKSCLNIAKNLQKK 333 (381)
Q Consensus 259 ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~--~~~~~g~---~~~s~I~~v~~gd~~~a~~~~~~L~~~ 333 (381)
+.+.+..+++.++|+ ..+...+......+.++++ .....|+ ++.+..+.+.++ ..+.++++.|+++
T Consensus 246 ----~v~~~aq~aa~aaL~---~~~~~~~~~~~~~~~R~~l~~~L~~~g~~v~ps~anFi~~~~~--~~~~~~~~~L~~~ 316 (352)
T PRK03321 246 ----SVNSLAQAAAIASLE---AADELLERVDAVVAERDRVSAALRAAGWTVPPSQANFVWLPLG--ERTADFAAAAAEA 316 (352)
T ss_pred ----CCHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEECC--CCHHHHHHHHHHC
T ss_conf ----855999999999964---9299999999999999999999997858588998749999518--9999999999819
Q ss_pred CEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 91898622888888870399962878999999999999999988
Q gi|254780486|r 334 GFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 334 Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
||+|+++ +...+||++. |+||.++++++|+++++
T Consensus 317 GIlVR~~-------~~~~~RIsvg---t~een~~ll~Alk~~~~ 350 (352)
T PRK03321 317 GVVVRPF-------GGEGVRVTVG---APEENDAFLRAARAWRA 350 (352)
T ss_pred CEEEEEC-------CCCEEEEEEC---CHHHHHHHHHHHHHHHC
T ss_conf 9399866-------9991899809---99999999999999972
No 113
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.6e-23 Score=166.69 Aligned_cols=317 Identities=18% Similarity=0.203 Sum_probs=190.7
Q ss_pred CCCEEEECCCC-CCCCCCCCHHHHHHHHHHHHH--HCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CEEEECCCC-H
Q ss_conf 89768980344-656677988999999999986--378688722443688589999999984012888-516741660-2
Q gi|254780486|r 27 RRQDIWDFTSH-DYLALSSSTLLREKILSSLDS--KIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE-KMLYFGSGY-A 101 (381)
Q Consensus 27 ~~~~~l~f~s~-dYLGl~~~p~v~~a~~~a~~~--~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e-~al~~~sG~-~ 101 (381)
.+.++++|++| |-+|- .|.++++..++++. +|+ ...+.+|-+.||+++|.+ +-+++.+|- .
T Consensus 36 ~~~~~i~L~~NeNP~gp--sp~v~~a~~~~~~~~~rYP------------d~~~~~Lr~aiA~~~gv~~~~I~v~nGs~e 101 (374)
T PRK05166 36 HVPRIAKLGSNENPLGP--SPALARLFPDIAELLRLYP------------DPQGRALRAEIAASFGVPTDQIILGNGSED 101 (374)
T ss_pred CCCCEEEECCCCCCCCC--CHHHHHHHHHHHHHCCCCC------------CCCHHHHHHHHHHHHCCCHHHEEECCCHHH
T ss_conf 89985880699999898--9999999998687537697------------987899999999996838301998568999
Q ss_pred HHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCC-----CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
Q ss_conf 4565566631689710045420267752666408764030568-----81478997643100024786079714621576
Q gi|254780486|r 102 ANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHN-----NINSFAENINKWRKSGGKGFPWIVVESIYSMD 176 (381)
Q Consensus 102 An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~ 176 (381)
+-..++.++++|||.|++-.=.=..-...+++.+++++.++-+ |++++.+.+ . .+.+.+++.-.=. =+
T Consensus 102 ~i~~~~~a~~~pGd~Vl~~~Ptf~~Y~~~~~~~G~~v~~vpl~~~~~~d~~~l~~ai---~---~~tklv~l~nPnN-PT 174 (374)
T PRK05166 102 LIAVICRAVLRPGDRVVTLYPSFPLHEDYPTLMGARVERVTVTPDLTVDVDALLAAV---A---RKPRMLMFSNPMN-PV 174 (374)
T ss_pred HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHH---C---CCCCEEEEECCCC-CC
T ss_conf 999999999739998987788777899999982981599736866797999999861---5---6987899828989-98
Q ss_pred CCHHHHHHHHHHHH--HCCEEEEECCCCCCCCCCCCCCEEEEEH-HCCCCCCCCCCCCCCCCCEE---EE-EECCCCCCC
Q ss_conf 61346899999863--1360898613112223477764011000-01346521001346565302---67-524510010
Q gi|254780486|r 177 GDKAPLDDLVKIAN--DYDGFIVVDEAHATGVCGPLGKGLTHII-EERNNVIVMHSCSKALGSSG---AL-VGSNKIIYD 249 (381)
Q Consensus 177 G~~apL~~i~~l~~--~y~~~LivDEah~~Gv~G~~G~G~~~~~-~~~~~~iv~~TlsKa~g~~G---G~-i~~~~~ii~ 249 (381)
|.+.+-+++.+|++ +.+.++++|||+.--+.++.-......+ +..+++|++.||||+||..| || +++++++++
T Consensus 175 G~~~~~~~l~~l~~~~~~~~~vvvDEaY~ef~~~~~~~~~~~~~~~~~~n~IvlrSfSK~~glaGlRvGyai~~~~~i~~ 254 (374)
T PRK05166 175 GSWLTPGALARLLDAVPPETLIVVDEAYAEYAAGDDYPSALTLLKNRGLPWVVLRTFSKAYGLAGLRIGYGLVSDPSLRA 254 (374)
T ss_pred CCCCCHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCCCHHHHHHHCCCCEEEEEECCHHHHCCCCCEEEEECCCHHHHH
T ss_conf 76588477999997458873999504789975278866479886204787799995556551577750454159299999
Q ss_pred CCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHCCCCC---CCCCCEEEEEECCHHHHH
Q ss_conf 00012110000135775025789887898862710224789999999987--6417978---998972899958979999
Q gi|254780486|r 250 YLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKI--ANKKIGF---SSQSHIQSIVIGDNKSCL 324 (381)
Q Consensus 250 ~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~--~~~~~g~---~~~s~I~~v~~gd~~~a~ 324 (381)
.+...-.+| ..+....+++.++++ +.+...+.+....+.++++ ....+|+ ++.+..+.+.++. .+.
T Consensus 255 ~l~~~~~~~----~v~~~aq~aa~aaL~---~~~~~~~~~~~~~~~R~~l~~~L~~~g~~v~ps~anFilv~~~~--~~~ 325 (374)
T PRK05166 255 FLDRVRTPF----NANGIAQAAALAALD---DEEHLAKGVALALAERERMKKELAEMGYRVAPSRANFLFFDART--DAS 325 (374)
T ss_pred HHHHHCCCC----CCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEECCC--CHH
T ss_conf 999834982----869999999999856---99999999999999999999999977794899866189986899--999
Q ss_pred HHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999779189862288888887039996287899999999999999998873
Q gi|254780486|r 325 NIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 325 ~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
+++++|+++||+|++...|- ....+||++. |.+|.++++++|+++++.+
T Consensus 326 ~~~~~L~~~gI~Vr~~~~~g---l~~~lRIsvg---t~een~rll~aL~~il~a~ 374 (374)
T PRK05166 326 ALAEALLRQGVIVKPWKQPG---FETYIRVSIG---SPEENDHFMAALDEVLAAG 374 (374)
T ss_pred HHHHHHHHCCCEEEECCCCC---CCCEEEEEEC---CHHHHHHHHHHHHHHHHCC
T ss_conf 99999984891998589899---9998999818---9999999999999998577
No 114
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase; InterPro: IPR012773 Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (2.6.1.76 from EC) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore (Q9Z3R2 from SWISSPROT) or 1,3-diaminopropane (P44951 from SWISSPROT) biosynthesis. Ectoine is a compatible solute particularly effective in conferring salt tolerance.; GO: 0030170 pyridoxal phosphate binding, 0047307 diaminobutyrate-pyruvate transaminase activity, 0019491 ectoine biosynthetic process.
Probab=99.93 E-value=9e-23 Score=162.09 Aligned_cols=329 Identities=21% Similarity=0.232 Sum_probs=203.4
Q ss_pred HHCCCEEEECCCCEEEECCCCC-CCCCC-CCHHHHHHHHHHHHHHCCCC-------------------------------
Q ss_conf 9759839992897689803446-56677-98899999999998637868-------------------------------
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSHD-YLALS-SSTLLREKILSSLDSKIPIG------------------------------- 63 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~d-YLGl~-~~p~v~~a~~~a~~~~~g~~------------------------------- 63 (381)
++.|.+.+..+||+||||=|.. =|... |||.+++++.+=+. .=|+-
T Consensus 23 ~AkG~~L~D~~Gk~YIDFlaGAGaLNYGHN~p~~K~~L~~Yl~-~DGI~hsLDM~T~AK~~Fl~~F~~~IL~PR~LdYK~ 101 (413)
T TIGR02407 23 KAKGSTLWDEDGKEYIDFLAGAGALNYGHNNPKLKQALIDYLA-DDGIIHSLDMATEAKREFLETFQEIILKPRGLDYKV 101 (413)
T ss_pred HCCCCEEEECCCCEEECHHHCCCCCCCCCCCHHHHHHHHHHHH-HCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCCCEE
T ss_conf 1226578703487311021015646788889899999999998-589336200241789999999998526788789515
Q ss_pred -CCCCCCCCCCCHHHHHHHHHHHH-HCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHH--HHCCCCCE
Q ss_conf -87224436885899999999840-128885167416602456556663168971004542026775266--64087640
Q gi|254780486|r 64 -SGGSRLLCGNYNQHLELEEEAAD-FFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGI--NSGKAQAI 139 (381)
Q Consensus 64 -~~~sr~~~G~~~~~~~lE~~lA~-~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~--~ls~a~~~ 139 (381)
.+|+- |++.+=-+| +||+ ..|.+..+-|..||+.....=-++++.. +-++|+ .++.+...
T Consensus 102 qFpGPT---GTNaVEsAl--KLARKvtGR~nvvaFTNaFHGmt~GsLsvTGN~-----------~~R~~aG~~~~~v~~m 165 (413)
T TIGR02407 102 QFPGPT---GTNAVESAL--KLARKVTGRSNVVAFTNAFHGMTLGSLSVTGNR-----------FKRQGAGVPLSNVSRM 165 (413)
T ss_pred ECCCCC---CHHHHHHHH--HHHHCCCCCCCEEEECCCCHHHHHHHHHHHHHH-----------HHHHCCCCCCCCCEEC
T ss_conf 688878---640799999--998503898406885177302348988864334-----------4430267447782568
Q ss_pred EEC------CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCH--HH---HHHHHHHHHHCCEEEEECCCCCCCCCC
Q ss_conf 305------6881478997643100024786079714621576613--46---899999863136089861311222347
Q gi|254780486|r 140 AIP------HNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDK--AP---LDDLVKIANDYDGFIVVDEAHATGVCG 208 (381)
Q Consensus 140 ~f~------HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~--ap---L~~i~~l~~~y~~~LivDEah~~Gv~G 208 (381)
||. -+++.=||+.|.-. .+.=+...-||+|.|-. +|.+ |. |++|.+|||+||.+|||||.|+ | +|
T Consensus 166 PYDgY~~~~~D~~~Yfe~~L~D~-sSGvd~PAAvILETVQG-EGGiNvAs~eWLq~l~~lCr~~DILLIVDDIQa-G-CG 241 (413)
T TIGR02407 166 PYDGYLGGEVDTIAYFEKLLEDS-SSGVDLPAAVILETVQG-EGGINVASKEWLQRLEKLCRRHDILLIVDDIQA-G-CG 241 (413)
T ss_pred CCCCCCCCCCCHHHHHHHHHCCC-CCCCCCCCEEEEECCCC-CCCCCCCCHHHHHHHHHHHHHCCCEEEEEEEEC-C-CC
T ss_conf 76557786432289999861788-89847672589811037-577031235579999999986498687731741-8-88
Q ss_pred CCCCEE-EEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCC-CCCCCCEECCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 776401-100001346521001346565302---6752451001000-01211000013577502578988789886271
Q gi|254780486|r 209 PLGKGL-THIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYL-INYAKPFIYTTSPSPILAVVACEALKLIKRKP 283 (381)
Q Consensus 209 ~~G~G~-~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l-~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~ 283 (381)
|||... .|..++.||++ ||||++|+.| +.++=++++=-|- =.|..+|. +-+++ =.+|.++|+....++
T Consensus 242 RTG~FFSFE~AgI~PDiV---cLSKSisG~GLPlal~L~kPe~D~W~PGEHNGTFR---GNNlA-FVtA~aAL~~yW~Dd 314 (413)
T TIGR02407 242 RTGTFFSFEPAGIEPDIV---CLSKSISGYGLPLALVLIKPELDVWKPGEHNGTFR---GNNLA-FVTATAALEYYWSDD 314 (413)
T ss_pred CCCCCCCCCCCCCCCCEE---EEECCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC---CCCHH-HHHHHHHHHHHCCCH
T ss_conf 878964534467756617---85020035512689997354567467887788646---65278-999999999848962
Q ss_pred CHHHHHHHHHHH----HHHHHH----CC-CCCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEE
Q ss_conf 022478999999----998764----17-978998972899958979999999999977918986228888888703999
Q gi|254780486|r 284 ALHKSLLQLINI----TDKIAN----KK-IGFSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRI 354 (381)
Q Consensus 284 ~~~~~l~~~~~~----~~~~~~----~~-~g~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi 354 (381)
.+.+.+++..+. ++++.. .. ....+..-+.-|.++++..|.++++.++++|+++=--. ....-|-|
T Consensus 315 ~f~~~v~~~s~~~~~~l~~~~~~~~~~~~~~~RGRGlm~Gl~~~~~~~A~~i~~~aF~~GLiiEtsG-----p~DeV~K~ 389 (413)
T TIGR02407 315 AFEKAVQRKSEIIQERLDEIVAEFPELIEKSVRGRGLMQGLECGDGDLAGKIAKAAFENGLIIETSG-----PEDEVIKL 389 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEEC-----CCCCEEEE
T ss_conf 6899999999999999999998745521311045201420004772468999999864683898718-----89845870
Q ss_pred ECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 628789999999999999999887
Q gi|254780486|r 355 SITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 355 ~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
.|+.+.++|++++=+++|++.++|
T Consensus 390 lPpLTI~~~~L~~GL~IL~~a~~~ 413 (413)
T TIGR02407 390 LPPLTIDEETLQQGLDILEQAVEE 413 (413)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 388988878899999999999719
No 115
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.93 E-value=1.9e-23 Score=166.33 Aligned_cols=317 Identities=16% Similarity=0.204 Sum_probs=192.1
Q ss_pred CCCCEEEECCCC-CCCCCCCCHHHHHHHHHHHHH--HCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CEEEECCCCH
Q ss_conf 289768980344-656677988999999999986--378688722443688589999999984012888-5167416602
Q gi|254780486|r 26 LRRQDIWDFTSH-DYLALSSSTLLREKILSSLDS--KIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE-KMLYFGSGYA 101 (381)
Q Consensus 26 ~~~~~~l~f~s~-dYLGl~~~p~v~~a~~~a~~~--~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e-~al~~~sG~~ 101 (381)
++..+++||||| |=+|. .|.+.++..+++.. +|+ .+.+.+|.++||+++|.+ +-+++.+|..
T Consensus 19 ~~~~~iidlSsN~NP~gp--pp~v~~ai~~~~~~~~~YP------------d~~~~~Lr~aiA~~~gv~~e~I~~gnGs~ 84 (358)
T PRK07392 19 CPPSAILDFSASINPLGP--PESVIAAIQSALSALRHYP------------DPDYRELREALAQHHQLPPEWILPGNGAA 84 (358)
T ss_pred CCHHHCEECCCCCCCCCC--CHHHHHHHHHHHHHHHHCC------------CCCHHHHHHHHHHHHCCCHHHEEECCCHH
T ss_conf 799984660899999898--9899999999888886489------------95689999999998595888898775799
Q ss_pred HHHHH-HHHHCCCCCCCCHHHHCCHHHH-HHHHHCCCCCEEECC--C---CHHHHHHHHHHHHHCCCCCCCEEEECCCCC
Q ss_conf 45655-6663168971004542026775-266640876403056--8---814789976431000247860797146215
Q gi|254780486|r 102 ANMAI-LSTLPQATDLIVYDKLVHASIR-EGINSGKAQAIAIPH--N---NINSFAENINKWRKSGGKGFPWIVVESIYS 174 (381)
Q Consensus 102 An~~~-i~~l~~~~d~ii~D~~~HaSi~-~g~~ls~a~~~~f~H--n---D~~~Le~~l~~~~~~~~~~~~~vv~egv~S 174 (381)
--+.. +.++...+.+++.+-. .+.+ ..++..+++++.++- . ++.++.... ...++.+.+++.-.=.
T Consensus 85 Eli~~~~~~~~~~~~v~i~~Pt--f~~Y~~~~~~~g~~v~~vpl~~~~~~~~~~~~~~~----~~~~~~~~i~l~nPNN- 157 (358)
T PRK07392 85 ELLTWAGRELAQLREVYLLTPA--FGDYRRALRAFGATVKELPLPLSGEASLTELQLLP----PQLTPNDGLLLNNPHN- 157 (358)
T ss_pred HHHHHHHHHHCCCCEEEEECCC--CHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHH----HCCCCCCEEEECCCCC-
T ss_conf 9999999997589869995785--18999999983988999857755567820567887----5589987899768999-
Q ss_pred CCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCC
Q ss_conf 7661346899999863136089861311222347776401100001346521001346565302---6752451001000
Q gi|254780486|r 175 MDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYL 251 (381)
Q Consensus 175 m~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l 251 (381)
=+|.+.+.++|.++++++ .++++|||+.--+.+.............+++|++.||||+||..| ||+.+++++++.+
T Consensus 158 PTG~~~~~~~l~~l~~~~-~~vvvDEaY~ef~~~~~~~s~~~~~~~~~n~iv~rSfSK~~glaGlRlGy~ia~~~~i~~l 236 (358)
T PRK07392 158 PTGKLWSREAILPLLEQF-ALVVVDEAFMDFLPPAAEQSLIPCLAEYPNLIILRSLTKFYSLPGLRLGYAIAHPDRLQRW 236 (358)
T ss_pred CCCCCCCHHHHHHHHHCC-CEEEEECHHHHHCCCCCCCCHHHHHHCCCCEEEEEECHHHHHCCCCCCEEEECCHHHHHHH
T ss_conf 977656879999886328-9999957155416886556789997535867999616287657441000002399999999
Q ss_pred CCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHCCC-CC---CCCCCEEEEEECCHHHHHH
Q ss_conf 012110000135775025789887898862710224789999999987--64179-78---9989728999589799999
Q gi|254780486|r 252 INYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKI--ANKKI-GF---SSQSHIQSIVIGDNKSCLN 325 (381)
Q Consensus 252 ~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~--~~~~~-g~---~~~s~I~~v~~gd~~~a~~ 325 (381)
+....+| +.+....+++.++++ +++..++......+.++++ ....+ |+ ++.+..+ ++..+..+.+
T Consensus 237 ~~~~~p~----~vn~~a~~aa~aal~---~~~~~~~~~~~~~~~R~~l~~~L~~l~g~~v~ps~anF~--l~~~~~~~~~ 307 (358)
T PRK07392 237 QQWRDPW----PVNGLAAAAAIAALA---DRDFQQQTWAWLPPAREALFQGLASLPGLTPLPSAANFL--LVQSQGSALQ 307 (358)
T ss_pred HHHCCCC----CCCHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEE--EEECCCCHHH
T ss_conf 9853887----778999999999825---999999999999999999999997189977888850499--9976999999
Q ss_pred HHHHHHHC-CEEEEE-ECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999977-918986-228888888703999628789999999999999999887
Q gi|254780486|r 326 IAKNLQKK-GFDIRA-IRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 326 ~~~~L~~~-Gi~v~~-i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
++++|+++ ||+|++ ..||- .+...+||++. |++|.++++++|+++++.
T Consensus 308 ~~~~ll~~~gI~Vr~~~~f~~--~g~~~iRisvg---t~een~~li~al~~iLa~ 357 (358)
T PRK07392 308 LQEELLQQHRILIRDCLSFPE--LGDRYFRVAVR---TEAENQRLLSALAAILAN 357 (358)
T ss_pred HHHHHHHCCCEEEEECCCCCC--CCCCEEEEEEC---CHHHHHHHHHHHHHHHHC
T ss_conf 999999719889986888888--89998999839---999999999999999706
No 116
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.92 E-value=5.7e-23 Score=163.35 Aligned_cols=327 Identities=12% Similarity=0.136 Sum_probs=197.3
Q ss_pred CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC---CEEEECCCCHHHHH
Q ss_conf 768980344656677988999999999986378688722443688589999999984012888---51674166024565
Q gi|254780486|r 29 QDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE---KMLYFGSGYAANMA 105 (381)
Q Consensus 29 ~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e---~al~~~sG~~An~~ 105 (381)
+++++|++|+= -|...|.+++|+.++++ .-.++ -+....-+.+|-+.||+++|.+ +.++.+.+..+-..
T Consensus 22 ~diI~L~~~e~-~~~~p~~v~~a~~~~~~-~~~~~------~Y~~~~g~~~Lr~aia~~~~~~~~~ei~vt~G~~~~l~~ 93 (375)
T PRK06225 22 PELIWLGQNTN-HLHPHPEVRDAMIRAAK-EGEYN------KYAPPEGFEELRELILADLGLDDDFDALVTAGATESLYL 93 (375)
T ss_pred CCEEECCCCCC-CCCCCHHHHHHHHHHHC-CCCCC------CCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHH
T ss_conf 99068999989-98857999999999964-89878------879963589999999998688999749982788999999
Q ss_pred HHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC--------CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC
Q ss_conf 56663168971004542026775266640876403056--------8814789976431000247860797146215766
Q gi|254780486|r 106 ILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH--------NNINSFAENINKWRKSGGKGFPWIVVESIYSMDG 177 (381)
Q Consensus 106 ~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H--------nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G 177 (381)
++.++++|||.|+.-.=.=..-...++..+++++.++- -|++++++.+. ++.+.+++...-.. .|
T Consensus 94 ~~~a~~~pGD~vl~~~P~y~~y~~~~~~~g~~~~~vpl~~~~~~~~~d~d~l~~~i~------~~tk~i~l~nPnNP-TG 166 (375)
T PRK06225 94 VIRAFLSPGTNTVTSDPGYKIIDNFANRFGAEVIEVPIYSEECDYKLTPEALKENVD------EETKLIVLIDPLNP-LG 166 (375)
T ss_pred HHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHCC------CCCCEEEECCCCCC-CC
T ss_conf 999977998989984898335999999849905745766854688789999996288------88828998299899-88
Q ss_pred CHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCC
Q ss_conf 134---6899999863136089861311222347776401100001346521001346565302---6752451001000
Q gi|254780486|r 178 DKA---PLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYL 251 (381)
Q Consensus 178 ~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l 251 (381)
.+. .+++|+++|++|+++++.||+|.- +.+... .......+++|++.||||+||..| ||+++++++++.+
T Consensus 167 ~v~s~~~l~~l~~~a~~~~i~ii~DE~Y~~--f~~~~~--~~~~~~~~~~iv~~S~SK~~~~~G~RiG~~i~~~~~i~~l 242 (375)
T PRK06225 167 SSYTREEIKEFAEIARDNDAYLVHDCTYRD--FAREHT--LAAEYAPEGTVTIYSFSKIFGLAGLRIGAVVAAPDLLEQV 242 (375)
T ss_pred CCCCHHHHHHHHHHHHHCCCCCCCHHHHHH--CCCCCC--CHHHHCCCCEEEECCCCHHCCCHHHHHHHHCCCHHHHHHH
T ss_conf 878899999999999862770000221332--067887--2345377875998236051357344051410799999999
Q ss_pred CCCCCCEECCCCCCCCHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHC--CCCC---CCCCCEEEEEEC-CHHHHH
Q ss_conf 012110000135775025789887898862-710224789999999987641--7978---998972899958-979999
Q gi|254780486|r 252 INYAKPFIYTTSPSPILAVVACEALKLIKR-KPALHKSLLQLINITDKIANK--KIGF---SSQSHIQSIVIG-DNKSCL 324 (381)
Q Consensus 252 ~~~~~~~ifst~l~P~~~aaa~aal~~l~~-~~~~~~~l~~~~~~~~~~~~~--~~g~---~~~s~I~~v~~g-d~~~a~ 324 (381)
...... .+ +.+.....++.++++.-.+ .++.++.+.++.++..+.... ..++ ++.+...-+.+. ....+.
T Consensus 243 ~~~~~~-~~--~~~~~~q~aa~aal~~~~~~~~~~~~~~~~~r~~~~~~l~~l~g~~~~~~p~~g~f~~~~~~~~g~~~~ 319 (375)
T PRK06225 243 AKYVVS-DL--GANVIAQEAAIAGLKVKSEWIERIRREDFRNQALIKEAVDEIEGVFLPVYPSHANMLVIDTSEAGIRPE 319 (375)
T ss_pred HHHHCC-CC--CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCEEEEEECCCCCCCHH
T ss_conf 987438-78--878999999999984899999999999999999999998537388516707974599998668898999
Q ss_pred HHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999779189862288888887039996287899999999999999998873
Q gi|254780486|r 325 NIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 325 ~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
++.+.|+++||.|.+..+..-..|...+||++. ..+|+++++++.|+++++++
T Consensus 320 ~~~~~l~e~gV~v~pG~~~~~~~g~~~iRis~~--~~~e~l~~a~~rl~~~l~~l 372 (375)
T PRK06225 320 DLVEYLLERKIFVRQGTYTSKRFGDRFIRVSFS--IPREWVERFCEEFPDVVATL 372 (375)
T ss_pred HHHHHHHHCCEEEECCCCCCCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHHHH
T ss_conf 999999978909968986788789992999970--48999999999999999986
No 117
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.92 E-value=1.4e-21 Score=154.69 Aligned_cols=340 Identities=14% Similarity=0.112 Sum_probs=194.2
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHHHHCCCC---C--EEEECCCC
Q ss_conf 897689803446566779889999999999863786-88722443688589999999984012888---5--16741660
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPI-GSGGSRLLCGNYNQHLELEEEAADFFGFE---K--MLYFGSGY 100 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~-~~~~sr~~~G~~~~~~~lE~~lA~~~g~e---~--al~~~sG~ 100 (381)
.|++++||+--|= .+...+.++++..++++ +-.+ |.+.+ .|...+.+++-+.+.+.+|.+ + .++++.+.
T Consensus 31 ~G~~vi~l~iG~P-d~~~P~~i~~a~~~a~~-~~~~~gY~~~---~G~~eLR~aia~~~~~~~g~~~~p~~~I~vt~Ga~ 105 (403)
T PRK08636 31 AGEDVIDFSMGNP-DGPTPQHIIDKLCESAQ-KPKTHGYSVS---KGIYKLRLAICNWYKRKYNVDLDPDTEVVATMGSK 105 (403)
T ss_pred CCCCEEECCCCCC-CCCCCHHHHHHHHHHHC-CCCCCCCCCC---CCHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHH
T ss_conf 5998688979689-99879999999999976-9988789997---47299999999999997099999987499917989
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC--C-----CHH----HHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 2456556663168971004542026775266640876403056--8-----814----7899764310002478607971
Q gi|254780486|r 101 AANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH--N-----NIN----SFAENINKWRKSGGKGFPWIVV 169 (381)
Q Consensus 101 ~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H--n-----D~~----~Le~~l~~~~~~~~~~~~~vv~ 169 (381)
.+-..++.++++|||.|++..=.-..-...+++.+++++.++- + |.+ ++++.++.. .++.+.+|+.
T Consensus 106 ~al~~~~~al~~pGD~Vli~~P~Y~~y~~~~~~~g~~~~~~~l~~~~~~~~d~~~~~~~le~~~~~~---~~ktk~iiln 182 (403)
T PRK08636 106 EGYVHLVQAITNPGDVAIVPDPAYPIHSQAFILAGGNVHKMPLEYNEDFELDEDKFFENLEKALRES---SPKPKYVVVN 182 (403)
T ss_pred HHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHCHHHHHHHC---CCCCEEEEEC
T ss_conf 9999999997799998997788870389999984996899743357774246665202589987626---8871799989
Q ss_pred CCCCCCCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCC-CCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEE
Q ss_conf 46215766134---68999998631360898613112223477-76401100001346521001346565302---6752
Q gi|254780486|r 170 ESIYSMDGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGP-LGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVG 242 (381)
Q Consensus 170 egv~Sm~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~-~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~ 242 (381)
-.-.. .|.+. .|++|+++|++||++++.||+|+.-++.. .-.......+..+..|.+.||||+|+..| ||++
T Consensus 183 ~P~NP-TG~v~s~~~l~~i~~la~~~~i~visDEiY~~l~~~g~~~~s~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~ii 261 (403)
T PRK08636 183 FPHNP-TTATVEKSFYERLVALAKKERFYIISDIAYADITFDGYKTPSILEVEGAKDVAVESYTLSKSYNMAGWRVGFVV 261 (403)
T ss_pred CCCCC-CCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEE
T ss_conf 99899-88788999999999999865938996264000001798787410275300133222442002577641289997
Q ss_pred CCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHH-CCCHHHHHHHHHHHH-HHHHHCCCCCC-CCCC-EEEEEEC
Q ss_conf 451001000012110000135775025789887898862-710224789999999-98764179789-9897-2899958
Q gi|254780486|r 243 SNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKR-KPALHKSLLQLINIT-DKIANKKIGFS-SQSH-IQSIVIG 318 (381)
Q Consensus 243 ~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~-~~~~~~~l~~~~~~~-~~~~~~~~g~~-~~s~-I~~v~~g 318 (381)
+++++++.+... ..++..+..+|...+ +..+++--++ -.+.++..+++.... +.+...++.+. ++.. .+.+-++
T Consensus 262 ~~~~li~~~~~~-~~~~~~~~~~~~q~a-a~~al~~~~~~~~~~~~~y~~rr~~l~~~l~~~g~~~~~P~g~~y~w~~l~ 339 (403)
T PRK08636 262 GNKKLIGALKKI-KSWLDYGMFTPIQVA-ATIALDGDQSCVEEIRETYEKRRDVLIKSFENAGWELQKPRASMFVWAKIP 339 (403)
T ss_pred CCHHHHHHHHHH-HHHCCCCCCHHHHHH-HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEEECC
T ss_conf 399999999999-986346856899999-999983989999999999999999999999865970037881038978787
Q ss_pred C---HHHHHHHHHHHHH-CCEEEEEE-CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 9---7999999999997-79189862-28888888703999628789999999999999999887387
Q gi|254780486|r 319 D---NKSCLNIAKNLQK-KGFDIRAI-RPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGNS 381 (381)
Q Consensus 319 d---~~~a~~~~~~L~~-~Gi~v~~i-~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~s 381 (381)
+ .....+++++|++ .||.+.|. .| -+.|...+|++.. .++++|++.++.|++.++|+.+
T Consensus 340 ~~~~~~~~~ef~~~ll~~~gV~v~PG~~F--g~~g~~~vRisf~--~~~e~l~ea~~Rl~~~l~e~~~ 403 (403)
T PRK08636 340 EPFRHLGSLEFSKQLLTEAKVAVSPGIGF--GEYGDEYVRIALI--ENENRIRQAARNIKKFLKEFEA 403 (403)
T ss_pred CCCCCCCHHHHHHHHHHCCCEEEECCHHH--CCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHCC
T ss_conf 54478998999999997497999887532--8899987999971--8999999999999999998449
No 118
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.92 E-value=3.5e-23 Score=164.66 Aligned_cols=316 Identities=11% Similarity=0.155 Sum_probs=193.2
Q ss_pred CCCEEEECCCC-CCCCCCCCHHHHHHHHHHHHH--HCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CEEEECCCCHH
Q ss_conf 89768980344-656677988999999999986--378688722443688589999999984012888-51674166024
Q gi|254780486|r 27 RRQDIWDFTSH-DYLALSSSTLLREKILSSLDS--KIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE-KMLYFGSGYAA 102 (381)
Q Consensus 27 ~~~~~l~f~s~-dYLGl~~~p~v~~a~~~a~~~--~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e-~al~~~sG~~A 102 (381)
+..++++|+|| |-+|. .|.+.++..+++.. +|+ .+.+.+|.++||+++|.+ +.+++.+|-.-
T Consensus 18 ~~~~iidlssNeNP~g~--p~~v~~ai~~~~~~~~rYP------------d~~~~~Lr~~iA~~~gv~~~~I~vgnGs~E 83 (356)
T PRK08056 18 SPDQLLDFSANINPLGM--PVSVKRALIDNLDCIERYP------------DADYFHLHQALARHHQVPASWILAGNGETE 83 (356)
T ss_pred CHHHEEEECCCCCCCCC--CHHHHHHHHHHHHHHHCCC------------CCCHHHHHHHHHHHHCCCHHHEEECCCHHH
T ss_conf 97667773799999899--9999999997475774199------------824899999999982988899887587899
Q ss_pred HHHHHHHHCCCCCCCCHHHHCCHHHH-HHHHHCCCCCEEECCCC---HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCC
Q ss_conf 56556663168971004542026775-26664087640305688---147899764310002478607971462157661
Q gi|254780486|r 103 NMAILSTLPQATDLIVYDKLVHASIR-EGINSGKAQAIAIPHNN---INSFAENINKWRKSGGKGFPWIVVESIYSMDGD 178 (381)
Q Consensus 103 n~~~i~~l~~~~d~ii~D~~~HaSi~-~g~~ls~a~~~~f~HnD---~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~ 178 (381)
-+.++....+++..++... -.|.+ ..++..+++++.++-++ .+..+..+.... ++.+.+++.-.-.. +|.
T Consensus 84 li~~i~~~~~~~~~~i~~P--tf~~Y~~~a~~~g~~v~~~~l~~~~~~~~~~~~~~~~~---~~~~lv~i~nPNNP-TG~ 157 (356)
T PRK08056 84 SIFTVASGLKPRRAMIVTP--GFAEYGRALAQVGCEIRRWSLREADGWQLTDAILEALT---PDLDCLFLCTPNNP-TGL 157 (356)
T ss_pred HHHHHHHHCCCCCEEEECC--CHHHHHHHHHHCCCEEEEEECCHHHCCCCCHHHHHHCC---CCCCEEEECCCCCC-CCC
T ss_conf 9999998548996699788--74999999998597699986773315897699997336---78888998189999-887
Q ss_pred HHH---HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECC-CCCCCCC
Q ss_conf 346---899999863136089861311222347776401100001346521001346565302---675245-1001000
Q gi|254780486|r 179 KAP---LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSN-KIIYDYL 251 (381)
Q Consensus 179 ~ap---L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~-~~ii~~l 251 (381)
+.+ |.++.+.|+++++++++|||+.- +-+....+.......+++|++.||||+||..| ||++++ ..+++.+
T Consensus 158 ~~~~~~l~~l~~~~~~~~~~vvvDEAY~e--f~~~~~s~~~~~~~~~nlivlrTfSK~~glaGlRiGy~i~~~~~~i~~l 235 (356)
T PRK08056 158 LPERQLLQAIADRCKSLNINLILDEAFID--FIPHETGFIPALKDNPHIWVLRSLTKFYAIPGLRLGYLVNSDDAAVARM 235 (356)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEEHHHHH--HCCCCCCHHHHHHCCCCEEEEEECCHHCCCCCCCHHHHHCCCHHHHHHH
T ss_conf 58999999999872404939997445576--4358613579984599789984141640685200011105889999999
Q ss_pred CCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHCCC-CC---CCCCCEEEEEECCHHHHHH
Q ss_conf 012110000135775025789887898862710224789999999987--64179-78---9989728999589799999
Q gi|254780486|r 252 INYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKI--ANKKI-GF---SSQSHIQSIVIGDNKSCLN 325 (381)
Q Consensus 252 ~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~--~~~~~-g~---~~~s~I~~v~~gd~~~a~~ 325 (381)
+....+| +.+....+++.+++ ++.+..++..+.+.+.++++ ....+ |+ ++.++.+.+.+.+ ...+
T Consensus 236 ~~~~~p~----~vn~~a~~aa~~al---~d~~~~~~~~~~i~~~r~~l~~~L~~l~g~~v~ps~aNFil~~~~~--~~~~ 306 (356)
T PRK08056 236 RRQQMPW----SINALAALAGEVAL---QDSAWQQATWHWLREEGARFYQALCQLPLLTVYPGRANYLLLRCER--EDID 306 (356)
T ss_pred HHHCCCC----CCCHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEECCC--CHHH
T ss_conf 9615899----81199999999983---6999999999999999999999986589978898988789998899--9999
Q ss_pred HHHHHHHCCEEEEEE-CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999999779189862-28888888703999628789999999999999999887
Q gi|254780486|r 326 IAKNLQKKGFDIRAI-RPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 326 ~~~~L~~~Gi~v~~i-~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
+.++|+++||+|+.. .||. .+...+||++. |++|.++++++|+++++-
T Consensus 307 ~~~~L~~~gIlVR~~~~f~g--l~~~~lRisig---t~~en~~ll~aL~~iL~g 355 (356)
T PRK08056 307 LQRRLLTQRILIRSCANYPG--LDSRYYRVAIR---SAAQNERLLAALRNVLTG 355 (356)
T ss_pred HHHHHHHCCEEEEECCCCCC--CCCCEEEEECC---CHHHHHHHHHHHHHHHCC
T ss_conf 99999968909976788899--99998999759---999999999999999737
No 119
>TIGR01141 hisC histidinol-phosphate aminotransferase; InterPro: IPR005861 The biosynthesis of histidine is a central metabolic process in organisms ranging from bacteria to yeast and plants. The seventh step in the synthesis of histidine within eubacteria is carried out by a pyridoxal-5'-phosphate (PLP)-dependent l-histidinol phosphate aminotransferase (HisC, 2.6.1.9 from EC). HisC is a dimeric enzyme with a mass of approximately 80 kDa. Like most PLP-dependent enzymes, each HisC monomer consists of two domains, a larger PLP-binding domain having an alpha/beta/alpha topology, and a smaller domain. An N-terminal arm contributes to the dimerization of the two monomers . ; GO: 0004400 histidinol-phosphate transaminase activity, 0000105 histidine biosynthetic process.
Probab=99.92 E-value=1.7e-23 Score=166.65 Aligned_cols=318 Identities=18% Similarity=0.250 Sum_probs=205.3
Q ss_pred CEEEECCCCCCCCCCCCHHHHHHHHHHHH--H--HCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--CCCEEEECCCCHH
Q ss_conf 76898034465667798899999999998--6--3786887224436885899999999840128--8851674166024
Q gi|254780486|r 29 QDIWDFTSHDYLALSSSTLLREKILSSLD--S--KIPIGSGGSRLLCGNYNQHLELEEEAADFFG--FEKMLYFGSGYAA 102 (381)
Q Consensus 29 ~~~l~f~s~dYLGl~~~p~v~~a~~~a~~--~--~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g--~e~al~~~sG~~A 102 (381)
.+.+.++||=+ =++-+|+++++..+++. . ||+ .+...+|-+.||+++| .+..=+..+|=.+
T Consensus 28 ~~~ikL~sNEn-P~gp~~~~~~~~~~~l~~a~l~RYP------------dp~~~~L~~~lA~~~~~~v~~eqi~~GGnGs 94 (377)
T TIGR01141 28 AEVIKLNSNEN-PYGPPEKAKEALRAELKEAKLHRYP------------DPDPAELKQALAKYLGKKVDPEQILLGGNGS 94 (377)
T ss_pred CCCEECCCCCC-CCCCCHHHHHHHHHHHHHCCCCCCC------------CCCHHHHHHHHHHHHCCCCCCCCEEEECCCH
T ss_conf 32214136788-9988889999999998508786798------------9866899999999828898714037841560
Q ss_pred HH---HHHHHHCCCC-CCCCHHHHCCHHHHH-HHHHCCCCCEEE--CCC--CHHHHHHHHH-HHHHCCCCCCCEEEECCC
Q ss_conf 56---5566631689-710045420267752-666408764030--568--8147899764-310002478607971462
Q gi|254780486|r 103 NM---AILSTLPQAT-DLIVYDKLVHASIRE-GINSGKAQAIAI--PHN--NINSFAENIN-KWRKSGGKGFPWIVVESI 172 (381)
Q Consensus 103 n~---~~i~~l~~~~-d~ii~D~~~HaSi~~-g~~ls~a~~~~f--~Hn--D~~~Le~~l~-~~~~~~~~~~~~vv~egv 172 (381)
+. .++.+++.|| |.|+.=.-. -+|+. -+...+++++.. .-| ...+++..+. ... . ...+|.+.+=
T Consensus 95 De~I~~l~raf~~PGk~~~l~~~Pt-y~mY~~~A~~~g~~~~~~~~~~~~~~~~d~~~~~~a~~~---~-~~kLvF~c~P 169 (377)
T TIGR01141 95 DEIIDLLIRAFLEPGKDAVLVPPPT-YSMYEISAKIHGAEVKKVPLDEDADGQLDLEDILVAAID---E-KPKLVFLCSP 169 (377)
T ss_pred HHHHHHHHHHHCCCCCCEEEECCCC-HHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHH---C-CCCEEEEECC
T ss_conf 6899999998527665457761775-003676553207147997405676675553789999862---6-9408998788
Q ss_pred CCCCCCHHHHHHHHHHHHHC---CEEEEECCCCCCCCCCC-CCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCC
Q ss_conf 15766134689999986313---60898613112223477-76401100001346521001346565302---6752451
Q gi|254780486|r 173 YSMDGDKAPLDDLVKIANDY---DGFIVVDEAHATGVCGP-LGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNK 245 (381)
Q Consensus 173 ~Sm~G~~apL~~i~~l~~~y---~~~LivDEah~~Gv~G~-~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~ 245 (381)
.-=+|..-+.++|.++++.- +++++||||+.- +.+. .-...+++...+|+++|.+||||+||..| ||.++++
T Consensus 170 NNPTG~~~~~~~i~~~l~~~~~g~~lVV~DEAY~E-F~~~~~~~~~~~ll~~ypNL~vlRTlSKafgLAG~R~Gy~~a~~ 248 (377)
T TIGR01141 170 NNPTGNLLSREDIEAVLERTPEGDALVVVDEAYGE-FSGEEDEPSVLPLLAEYPNLIVLRTLSKAFGLAGLRVGYAIANA 248 (377)
T ss_pred CCCCCCCCCHHHHHHHHHHCCCCCEEEEEEECCCC-CCCCCCCCCCCCHHHHCCCEEEEHHHHHHHHHHHHHHHHHCCCH
T ss_conf 68867526989999999717699738998642345-78886776532314207987998106788778888898860699
Q ss_pred CCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH----HHHHHHHC-CC--CCCCCCCEEEEEEC
Q ss_conf 0010000121100001357750257898878988627102247899999----99987641-79--78998972899958
Q gi|254780486|r 246 IIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLIN----ITDKIANK-KI--GFSSQSHIQSIVIG 318 (381)
Q Consensus 246 ~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~----~~~~~~~~-~~--g~~~~s~I~~v~~g 318 (381)
+||+.|...-.|| .+|-++.++|.+||+--.-. ...+...++.+ +.+++... .+ -++|.+..+-+.+.
T Consensus 249 ~~i~~l~kvr~Pf----n~~~la~~~A~aAL~~~~~~-~~~~~~~~~~~~Re~l~~~L~~~~~~~~v~~S~aNF~L~~~~ 323 (377)
T TIGR01141 249 EIIDALNKVRAPF----NLSRLAQAAAIAALRDDDLQ-FIEKTVEEINAERERLYDELKKLEGLEDVYPSDANFVLIRFP 323 (377)
T ss_pred HHHHHHHHCCCCC----CCCHHHHHHHHHHCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCEEEEECC
T ss_conf 9999998516887----88979999999852714679-999999999989999999987143000142577637999627
Q ss_pred C-HHHHHHHHHHHHHCCEEEEEECC-CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 9-79999999999977918986228-888888703999628789999999999999999
Q gi|254780486|r 319 D-NKSCLNIAKNLQKKGFDIRAIRP-PTVPINTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 319 d-~~~a~~~~~~L~~~Gi~v~~i~~-PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
. ...+..+.++|+++||+|+.... | +.....|||||. |+||.++++++|+++
T Consensus 324 ~~~~~a~~~~~~L~~~GiivR~~~~~~--Gl~~~~lRITvG---t~eEn~~~l~~l~e~ 377 (377)
T TIGR01141 324 RGGLDAEALFEALLEKGIIVRDLNSFP--GLLPNCLRITVG---TREENDRFLEALREI 377 (377)
T ss_pred CCCCCHHHHHHHHHHCCEEEEECCCCC--CCCCCCEEEEEC---CHHHHHHHHHHHHCC
T ss_conf 767777999999986780686065578--877762689728---879999999998509
No 120
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.92 E-value=2e-22 Score=159.97 Aligned_cols=315 Identities=16% Similarity=0.150 Sum_probs=193.9
Q ss_pred CCCEEEECCCCCC-CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CEEEECCCCHHH-
Q ss_conf 8976898034465-6677988999999999986378688722443688589999999984012888-516741660245-
Q gi|254780486|r 27 RRQDIWDFTSHDY-LALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE-KMLYFGSGYAAN- 103 (381)
Q Consensus 27 ~~~~~l~f~s~dY-LGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e-~al~~~sG~~An- 103 (381)
..+++++|+||-= +|. .|.+.++..+++.. .. | + ..+.+.+|-+.||+++|.+ +-+++.+|..--
T Consensus 27 g~~~~ikLssNENP~g~--s~~v~~al~~~~~~-~~------~--Y-Pd~~~~~Lr~~iA~~~gv~~e~I~vgnGs~E~i 94 (366)
T PRK01533 27 GDHSFVKLASNENPFGC--SPRVLDELQKSWLD-HA------L--Y-PDGGATTLRQTIANKLHVKMEQVLCGSGLDEVI 94 (366)
T ss_pred CCCCEEEEECCCCCCCC--CHHHHHHHHHHHHH-CC------C--C-CCCCHHHHHHHHHHHHCCCHHHEEECCCHHHHH
T ss_conf 88876995089999999--99999999987874-55------7--9-697789999999998682821299817899999
Q ss_pred HHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCC-CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHH
Q ss_conf 65566631689710045420267752666408764030568-81478997643100024786079714621576613468
Q gi|254780486|r 104 MAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHN-NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPL 182 (381)
Q Consensus 104 ~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~Hn-D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL 182 (381)
..++.+++.++|.|+.-.-.=..-...+++.++++..++-+ +.-+++........ +. .+|++-.=--=+|.+-+.
T Consensus 95 ~~~~~a~~~~gd~vl~~~Ptf~~Y~~~a~~~g~~~~~v~l~~~~~d~~~i~~~~~~---~~-klv~l~nPNNPTG~~~~~ 170 (366)
T PRK01533 95 QIISRAVLKAGDNIVTAGATFPQYRHHAIIEGCEVKEVALNNGVYDLDEISSVVDN---DT-KIVWICNPNNPTGTYVND 170 (366)
T ss_pred HHHHHHHHCCCCEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHCCC---CC-CEEEECCCCCCCCCCCCH
T ss_conf 99999994799823658988645799999808648998367786699999975065---98-789977999997674670
Q ss_pred HHHHHHHHH--CCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCC
Q ss_conf 999998631--36089861311222347776401100001346521001346565302---6752451001000012110
Q gi|254780486|r 183 DDLVKIAND--YDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKP 257 (381)
Q Consensus 183 ~~i~~l~~~--y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~ 257 (381)
+++.++++. .+.+++||||+.--+-+..-..........+++|++.||||+||..| ||+++++++++.++....|
T Consensus 171 ~~l~~ll~~~~~~~~vviDEAY~ef~~~~~~~~~~~l~~~~~NliVlrTfSK~~glaGlRiGy~ia~~~ii~~l~~~~~p 250 (366)
T PRK01533 171 RKLTQFIEGISENTLIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFSKAYGLASFRVGYAVGHEELIEKLNVVRLP 250 (366)
T ss_pred HHHHHHHHHCCCCEEEEECHHHHHHHCCCCCCHHHHHHHCCCCEEEEECCCHHCCCCCHHHHHHHCCHHHHHHHHHHCCC
T ss_conf 65899986278773786128789764257871057787618984899727432368303453662899999999985589
Q ss_pred EECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH---HHHHHHHHHCCCC---CCCCCCEEEEEECCHHHHHHHHHHHH
Q ss_conf 00013577502578988789886271022478999---9999987641797---89989728999589799999999999
Q gi|254780486|r 258 FIYTTSPSPILAVVACEALKLIKRKPALHKSLLQL---INITDKIANKKIG---FSSQSHIQSIVIGDNKSCLNIAKNLQ 331 (381)
Q Consensus 258 ~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~---~~~~~~~~~~~~g---~~~~s~I~~v~~gd~~~a~~~~~~L~ 331 (381)
| +.+.+..+++.++|+ ++....+..+.+ .+.+.. .....| +++.+..+.+.+.+ +.++.+.|.
T Consensus 251 ~----~vn~la~~aa~aaL~---d~~~~~~~~~~~~e~~~~~~~-~l~~~g~~v~pS~aNFilv~~~~---~~~l~~~L~ 319 (366)
T PRK01533 251 F----NVSSLAQKAATIAFG---DDEFIEEIVRVNTEGLRQYES-FCKENEIPFYQSQTNFIFLPVEN---GGEIYEACA 319 (366)
T ss_pred C----CCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHH-HHHHCCCEECCCCCCEEEEECCC---HHHHHHHHH
T ss_conf 8----843999999999967---999999999999999999999-99878685899978779986699---999999999
Q ss_pred HCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 779189862288888887039996287899999999999999998873
Q gi|254780486|r 332 KKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 332 ~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
++||+|+.+ | ..|||++. |+||.++++++|+++++.-
T Consensus 320 ~~GIlVR~~--~------~~iRIsvg---t~eeN~~ll~aLke~~e~~ 356 (366)
T PRK01533 320 HAGFIIRPF--P------NGVRITVG---TREQNEGVISVLQQHFENK 356 (366)
T ss_pred HCCEEEEEC--C------CCEEEECC---CHHHHHHHHHHHHHHHHHC
T ss_conf 689899899--5------98788279---9999999999999999855
No 121
>PRK09105 putative aminotransferase; Provisional
Probab=99.92 E-value=6.4e-23 Score=163.02 Aligned_cols=310 Identities=15% Similarity=0.176 Sum_probs=193.1
Q ss_pred CEEEECCCCCCCCCCCCHHHHHHHHHHHHH--HCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CEEEECCCCHHHH-
Q ss_conf 768980344656677988999999999986--378688722443688589999999984012888-5167416602456-
Q gi|254780486|r 29 QDIWDFTSHDYLALSSSTLLREKILSSLDS--KIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE-KMLYFGSGYAANM- 104 (381)
Q Consensus 29 ~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~--~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e-~al~~~sG~~An~- 104 (381)
+..+-++||-- -+.-.|.+++|..+++.. +|+ .+.+.+|-++||+++|.+ +-+++.+|-.--+
T Consensus 46 ~g~ikL~sNEN-P~Gpsp~v~~Ai~~~~~~~~rYP------------d~~~~~Lr~~lA~~~gv~~~~I~~gnGSdE~i~ 112 (374)
T PRK09105 46 EGAVFLNFNEN-PLGPSAAARAAAARSAALSGRYL------------FEMQDELRTLFAAQLGLPVDHLHAYAGSSEPLN 112 (374)
T ss_pred CCCEEEECCCC-CCCCCHHHHHHHHHHHHHCCCCC------------CCCHHHHHHHHHHHHCCCHHHEEEECCHHHHHH
T ss_conf 99978458888-88989999999997652457798------------986899999999997859024999369999999
Q ss_pred HHHHHHCCCCCCCCHHHHCCHHHH-HHHHHCCCCCEEECCC-CHH-HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH
Q ss_conf 556663168971004542026775-2666408764030568-814-7899764310002478607971462157661346
Q gi|254780486|r 105 AILSTLPQATDLIVYDKLVHASIR-EGINSGKAQAIAIPHN-NIN-SFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP 181 (381)
Q Consensus 105 ~~i~~l~~~~d~ii~D~~~HaSi~-~g~~ls~a~~~~f~Hn-D~~-~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap 181 (381)
.++.++++++|.|+.-.-. .+++ ..++..+++++.++-+ |.. |++..+.. .++.+ +|++-.=.-=+|.+-+
T Consensus 113 ~l~~af~~~g~~vv~~~Pt-f~~Y~~~a~~~g~~v~~vpl~~d~~~dl~~l~~~----~~~tk-lv~l~nPNNPTG~~~~ 186 (374)
T PRK09105 113 YAVLAFTSPEAGLVTADPT-YEAGWRAADAQGAKVIKVPLRADGAHDVRAMLAA----DPNAG-LIYICNPNNPTGSVTP 186 (374)
T ss_pred HHHHHHHCCCCEEEECCCC-HHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHC----CCCCC-EEEECCCCCCCCCCCC
T ss_conf 9999980799868958887-7999999998297799986165558586889735----78987-8997889999876579
Q ss_pred HHHHHHHHHH--CCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCC
Q ss_conf 8999998631--36089861311222347776401100001346521001346565302---675245100100001211
Q gi|254780486|r 182 LDDLVKIAND--YDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAK 256 (381)
Q Consensus 182 L~~i~~l~~~--y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~ 256 (381)
..+|.+++++ .+++++||||+.- +.+. ..........+++|++.||||+||..| ||..+++++++.++.+..
T Consensus 187 ~~el~~~~~~~~~~~lvvvDEAY~e--f~~~-~s~~~l~~~~~NvivlRTfSKaygLAGlRvGY~ia~~~li~~l~~~~~ 263 (374)
T PRK09105 187 RADIEWLLAHKPAGSVVLVDEAYIH--FSDA-PSVVDLVAQRKDVVVLRTFSKLYGMAGMRLGLAAARPDLLAKLARFGG 263 (374)
T ss_pred HHHHHHHHHHCCCCCEEEEEHHHHH--HCCC-CCCHHHHHCCCCEEEEEHHHHHHCCCCCCCCHHHCCHHHHHHHHHCCC
T ss_conf 9999999971898818998626766--2578-643256742898899822237626651002231089999999973588
Q ss_pred CEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHCCCCC---CCCCCEEEEEECCHHHHHHHHHHHH
Q ss_conf 0000135775025789887898862710224789999999987--6417978---9989728999589799999999999
Q gi|254780486|r 257 PFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKI--ANKKIGF---SSQSHIQSIVIGDNKSCLNIAKNLQ 331 (381)
Q Consensus 257 ~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~--~~~~~g~---~~~s~I~~v~~gd~~~a~~~~~~L~ 331 (381)
.++|-...+++.++|+ +.+...+....+.+.++++ .....|+ ++++..+.+.++. .+..+.++|+
T Consensus 264 -----~~~~~~a~aaa~aaL~---d~~~~~~~~~~~~~~R~~l~~~L~~~g~~~~pS~aNFil~~~~~--~a~~~~~~L~ 333 (374)
T PRK09105 264 -----NPLPVPAAAAGLASLR---DPKLVPQRRAQNAAVREDTIAWLRKQGYACTPSQANCFMVDVKR--PAEVFADAMA 333 (374)
T ss_pred -----CCCCHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEECCC--CHHHHHHHHH
T ss_conf -----9887999999999962---99999999999999999999999978395899878579995599--9999999999
Q ss_pred HCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 7791898622888888870399962878999999999999999988
Q gi|254780486|r 332 KKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 332 ~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
++||+|.- .+| .....+||++. |+||+++++++|++|++
T Consensus 334 ~~gIlV~r-~~~---~~~~~lRISiG---t~een~~fl~AL~evL~ 372 (374)
T PRK09105 334 KQGVFIGR-SWP---IWPNWVRVTVG---TEEEMAAFRSAFAKVMR 372 (374)
T ss_pred HCCEEEEC-CCC---CCCCEEEEECC---CHHHHHHHHHHHHHHHC
T ss_conf 69979937-999---88997999469---99999999999999866
No 122
>PRK06375 consensus
Probab=99.92 E-value=1.9e-21 Score=153.88 Aligned_cols=348 Identities=12% Similarity=0.091 Sum_probs=205.5
Q ss_pred HHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 57899999999997598399928976898034465667798899999999998637868872244368858999999998
Q gi|254780486|r 5 QMSFYEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEA 84 (381)
Q Consensus 5 ~~~~~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~l 84 (381)
...-+.++.++++++ |+++++|+--| -.+...|.|++++.+++. .--++.+- ..|..++.+++-+.+
T Consensus 13 ~~~~~~~~a~~l~~~--------G~dvi~l~iG~-pdf~~P~~i~~a~~~~~~-~~~~~Y~~---~~G~~~lR~aia~~~ 79 (381)
T PRK06375 13 ATVSASNRVEKLRKQ--------GKKLYNFGIGE-PDFTTPDNIIKYAFEMAK-SGKTHYTP---SAGIPELREKIALKL 79 (381)
T ss_pred HHHHHHHHHHHHHHC--------CCCCEECCCCC-CCCCCCHHHHHHHHHHHH-CCCCCCCC---CCCCHHHHHHHHHHH
T ss_conf 999999999999977--------99707738999-999868999999999973-79988899---998699999999999
Q ss_pred HHHCC----CCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCC-----CHHHHHHHHHH
Q ss_conf 40128----8851674166024565566631689710045420267752666408764030568-----81478997643
Q gi|254780486|r 85 ADFFG----FEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHN-----NINSFAENINK 155 (381)
Q Consensus 85 A~~~g----~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~Hn-----D~~~Le~~l~~ 155 (381)
.+.+| .|..++. +|-.+-..++.+++++||.|++..=.-.+....+++.+++.+..+.. |+++|++.+.
T Consensus 80 ~~~~g~~~~~~~i~vt-~~~~~l~~~~~~l~~pGD~Vii~~P~Y~~y~~~~~~~g~~~v~~~~~~~~~~d~~~l~~~i~- 157 (381)
T PRK06375 80 KSRNNIDAVAKNVLVT-PTKFGINLAMMVILNPGDEVLIPSPYYVSYPDIVKLAGGKPVFVDTDDDYNIDIDNMRKAVT- 157 (381)
T ss_pred HHHCCCCCCCCEEEEE-CHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHCC-
T ss_conf 9855999995769985-48999999999866999989981888761999999819977642038877979999996378-
Q ss_pred HHHCCCCCCCEEEECCCCCCCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCC
Q ss_conf 1000247860797146215766134---6899999863136089861311222347776401100001346521001346
Q gi|254780486|r 156 WRKSGGKGFPWIVVESIYSMDGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSK 232 (381)
Q Consensus 156 ~~~~~~~~~~~vv~egv~Sm~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsK 232 (381)
++.+.+++.-.-.. .|.+. .+.+|.++|++||++++.||+|+.-++...-.......+..+++|+++||||
T Consensus 158 -----~~tk~i~l~nP~NP-TG~v~s~e~l~~i~~la~~~~i~iIsDEiY~~l~~~g~~~~~~~~~~~~~~~I~~~S~SK 231 (381)
T PRK06375 158 -----PKTRAIIINNPVNP-TGKVLSEKEIRELVDFALENNLYIVSDEIYEDLIYRGKLFSPASIPEAFDKTITLNGFSK 231 (381)
T ss_pred -----CCCEEEEECCCCCC-CCCCCCHHHHHHHHHHHHHCEEEEEECCCHHHHCCCCCCCCHHHHHHHHCCEEEEEHHHH
T ss_conf -----67749998999798-899999999999999887565899813205755169987785340211065799841022
Q ss_pred CCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC--
Q ss_conf 565302---675245100100001211000013577502578988789886271022478999999998764179789--
Q gi|254780486|r 233 ALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIANKKIGFS-- 307 (381)
Q Consensus 233 a~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~~g~~-- 307 (381)
.|+..| ||+++++++++.+... ....++ ..|.+...++.++++--+.-.++++.++++..+..+......++.
T Consensus 232 ~~~~~G~RiG~~i~~~~~i~~~~~~-~~~~~~-~~~~~~q~aa~~al~~~~~~~~~~~~~~~rr~~~~~~l~~~~~~~~~ 309 (381)
T PRK06375 232 GYAMTGWRIGYMVAPEEIVEAANKI-QQQTIT-CASSISQYAALRALDDDESPKHMREEFEKRRDLVVSILKESDNLHVY 309 (381)
T ss_pred HHHCCCCCEEEEEECHHHHHHHHHH-HHHCCC-CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 4331465559998389999999999-975446-75629999999996282779999999999999999998518997795
Q ss_pred -CCCCEEEEE--ECCHHHHHHHHHHHH-HCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -989728999--589799999999999-779189862288888887039996287899999999999999998873
Q gi|254780486|r 308 -SQSHIQSIV--IGDNKSCLNIAKNLQ-KKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 308 -~~s~I~~v~--~gd~~~a~~~~~~L~-~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
++.. ..++ +.......++++.|+ ++||.+.|...= -+.+...+|++.. .+++++++.++.|++.++.+
T Consensus 310 ~P~G~-~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F-g~~g~~~~Ri~~a--~~~e~l~ea~~RL~~~~~~l 381 (381)
T PRK06375 310 EPEGA-FYVFPGYESDIKSYKAAENLLENKNVVVTPGSAF-GRQGEHHFRISFA--TSEDIIKEGIERIGKFFKSI 381 (381)
T ss_pred CCCEE-EEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHH-CCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHHHC
T ss_conf 67814-8995607999898999999998599999787354-8899997999981--99999999999999999859
No 123
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=9.2e-23 Score=162.04 Aligned_cols=319 Identities=17% Similarity=0.222 Sum_probs=190.5
Q ss_pred EEECCCCCC-CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC------C-CCEEEECCCCHH
Q ss_conf 898034465-66779889999999999863786887224436885899999999840128------8-851674166024
Q gi|254780486|r 31 IWDFTSHDY-LALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG------F-EKMLYFGSGYAA 102 (381)
Q Consensus 31 ~l~f~s~dY-LGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g------~-e~al~~~sG~~A 102 (381)
.+-+++|-= +|. .|.++++..+++.. ... ...| + ....+.+|-++||++++ . ++-+++.+|-.-
T Consensus 28 ~IkL~~NENP~gp--sp~~~~ai~~a~~~-~~~--~~nr--Y-Pd~~~~~Lr~alA~~l~~~~~~gv~~e~Ii~gnGSdE 99 (369)
T PRK03317 28 PVRLNTNENPYPP--SPALVDDIARAVRE-AAA--GLNR--Y-PDRDAVALRTDLAAYLTAQTGVGLGVENVWAANGSNE 99 (369)
T ss_pred CEEEECCCCCCCC--CHHHHHHHHHHHHH-HHH--HCCC--C-CCCCHHHHHHHHHHHHHHCCCCCCCHHHEEECCCHHH
T ss_conf 8660078899999--99999999999997-665--2472--8-9974899999999875030267978778788268999
Q ss_pred H-HHHHHHHCCCCCCCCHHHHCCHHHH-HHHHHCCCCCEEECCC-CH-HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCC
Q ss_conf 5-6556663168971004542026775-2666408764030568-81-47899764310002478607971462157661
Q gi|254780486|r 103 N-MAILSTLPQATDLIVYDKLVHASIR-EGINSGKAQAIAIPHN-NI-NSFAENINKWRKSGGKGFPWIVVESIYSMDGD 178 (381)
Q Consensus 103 n-~~~i~~l~~~~d~ii~D~~~HaSi~-~g~~ls~a~~~~f~Hn-D~-~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~ 178 (381)
- ..++.+++++||.|+.-.-. .+++ .-++..+++++.++.+ |+ -|++..++...... . .+|++-.=..=+|.
T Consensus 100 ~i~~i~~af~~pGd~vl~~~Pt-f~~Y~~~a~~~g~~~v~v~~~~df~~d~d~l~~ai~~~~--~-klv~l~nPNNPTG~ 175 (369)
T PRK03317 100 ILQQLLQAFGGPGRSALGFVPS-YSMHPIIARGTHTEWVAAPRAADFGLDVDAAVAAIREHR--P-DVVFLTSPNNPTGT 175 (369)
T ss_pred HHHHHHHHHCCCCCEEEECCCC-HHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHCCC--C-CEEEECCCCCCCCE
T ss_conf 9999999982899989974786-027999998709779993678788839999999863269--8-58997589998771
Q ss_pred HHHHHHHHHHHHHC-CEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCC
Q ss_conf 34689999986313-6089861311222347776401100001346521001346565302---6752451001000012
Q gi|254780486|r 179 KAPLDDLVKIANDY-DGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINY 254 (381)
Q Consensus 179 ~apL~~i~~l~~~y-~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~ 254 (381)
+-+..++.++++.. +.++++|||+.- +..+............+++|++.||||+||..| ||+++++++++.++..
T Consensus 176 ~~~~~~l~~i~~~~~~~~vvvDEAY~e-f~~~~~~s~~~l~~~~~nlivlRTfSK~~gLAGlRlGy~ia~~~~i~~l~~~ 254 (369)
T PRK03317 176 ALPLDDVEALLDAAPPGIVVVDEAYAE-FSRQGTPSALTLLPGYPRLVVSRTMSKAFAFAGGRLGYLAAAPAVIDALRLV 254 (369)
T ss_pred ECCHHHHHHHHHHCCCCEEEECCCHHH-HHCCCCCCHHHHHHCCCCEEEEECCHHHHCCCCHHHEEEECCHHHHHHHHHH
T ss_conf 237899999998588777994387798-6156887667886137978999410586446653314100699999999984
Q ss_pred CCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHCCCCC---CCCCCEEEEEECCHHHHHHHHHH
Q ss_conf 110000135775025789887898862710224789999999987--6417978---99897289995897999999999
Q gi|254780486|r 255 AKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKI--ANKKIGF---SSQSHIQSIVIGDNKSCLNIAKN 329 (381)
Q Consensus 255 ~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~--~~~~~g~---~~~s~I~~v~~gd~~~a~~~~~~ 329 (381)
-.+| ..+-...+++.++|+ +.+...+...++.+.++++ ....+|+ ++.+..+ ++.....+..+.++
T Consensus 255 ~~p~----~vn~~a~~aa~aaL~---d~~~~~~~~~~i~~~R~~l~~~L~~lg~~v~pS~aNFi--l~~~~~~~~~~~~~ 325 (369)
T PRK03317 255 RLPY----HLSAVTQAAARAALR---HADETLASVAALRAERDRVVAWLRELGFRVAPSDANFV--LFGRFADAHAVWQR 325 (369)
T ss_pred CCCC----CCCHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEE--EEECCCCHHHHHHH
T ss_conf 4898----867999999999974---99999999999999999999999978397888988779--99637999999999
Q ss_pred HHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 997791898622888888870399962878999999999999999988738
Q gi|254780486|r 330 LQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 330 L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
|+++||+|+.+..| ..+||++. |+||.++++++|++++++-+
T Consensus 326 L~~~gIlVR~~g~~------~~lRisig---t~een~~~l~al~~il~~~~ 367 (369)
T PRK03317 326 LLDRGVLIRDVGIP------GWLRVTIG---TPEENDAFLDALAEVLATEL 367 (369)
T ss_pred HHHCCCEECCCCCC------CCEEEECC---CHHHHHHHHHHHHHHHHCCC
T ss_conf 99689689228998------93799619---99999999999999972275
No 124
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.92 E-value=1.9e-22 Score=160.01 Aligned_cols=313 Identities=16% Similarity=0.247 Sum_probs=193.8
Q ss_pred CCCEEEECCCC-CCCCCCCCHHHHHHHHHHHHH---HCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CEEEECCCCH
Q ss_conf 89768980344-656677988999999999986---378688722443688589999999984012888-5167416602
Q gi|254780486|r 27 RRQDIWDFTSH-DYLALSSSTLLREKILSSLDS---KIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE-KMLYFGSGYA 101 (381)
Q Consensus 27 ~~~~~l~f~s~-dYLGl~~~p~v~~a~~~a~~~---~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e-~al~~~sG~~ 101 (381)
.++++++|++| |=+|. .|.++++..+++.. +|+ .+.+.+|-++||+++|.+ +-+++..|..
T Consensus 22 ~~~~ii~L~~NEnP~gp--sp~v~~a~~~~~~~~~~~YP------------d~~~~~Lr~~iA~~~gv~~~~I~vg~Gs~ 87 (353)
T PRK05387 22 KLANLIKLNTNENPYPP--SPKVLEAIRAALGDDLRLYP------------DPDATALRQAIAAYYGVSPEQVFVGNGSD 87 (353)
T ss_pred CCCCEEEEECCCCCCCC--CHHHHHHHHHHHHHHHCCCC------------CCCHHHHHHHHHHHHCCCHHHEEECCCHH
T ss_conf 99984794097999999--99999999996752524799------------99789999999999786858899857899
Q ss_pred -HHHHHHHHHCCCCCCCCHHHHCCHHHH-HHHHHCCCCCEEECCCC-HH-HHHHHHHHHHHCCCCCCCEEEECCCCCCCC
Q ss_conf -456556663168971004542026775-26664087640305688-14-789976431000247860797146215766
Q gi|254780486|r 102 -ANMAILSTLPQATDLIVYDKLVHASIR-EGINSGKAQAIAIPHNN-IN-SFAENINKWRKSGGKGFPWIVVESIYSMDG 177 (381)
Q Consensus 102 -An~~~i~~l~~~~d~ii~D~~~HaSi~-~g~~ls~a~~~~f~HnD-~~-~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G 177 (381)
+-..++.++++++|.|+.-.-. .+.+ ..+++.++++..++-++ ++ +++..++. ...+++...= .=+|
T Consensus 88 e~i~~~~~~~~~~gd~Vl~p~Pt-y~~Y~~~a~~~g~~~~~vp~~~~~~~~~~~~~~~-------~~~v~l~nPn-NPTG 158 (353)
T PRK05387 88 EVLAHAFLAFFKHDRPLLFPDIT-YSFYPVYAGLYGIPYEEVPLDDDFSIDVEDYLRP-------NGGIIFPNPN-APTG 158 (353)
T ss_pred HHHHHHHHHHHCCCCEEEECCCC-CHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHCC-------CCEEEEECCC-CCCC
T ss_conf 99999999961899866407877-0369999998095489950564345799997263-------6769984899-9878
Q ss_pred CHHHHHHHHHHHHHC-CEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCC
Q ss_conf 134689999986313-6089861311222347776401100001346521001346565302---675245100100001
Q gi|254780486|r 178 DKAPLDDLVKIANDY-DGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLIN 253 (381)
Q Consensus 178 ~~apL~~i~~l~~~y-~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~ 253 (381)
.+.+..++.+++++. +.++++|||+. -+.+++ ........+++|++.||||+||..| ||+++++++++.+..
T Consensus 159 ~~~~~~~l~~ll~~~~~~~vvvDEAY~-ef~~~s---~~~l~~~~~nlivlrTfSK~~glaGlRlGy~ia~~~li~~l~~ 234 (353)
T PRK05387 159 IALPLADIERILAANPDSVVVIDEAYV-DFGGES---AIPLIDRYPNLLVVQTLSKSRSLAGLRVGFAIGHPELIEALER 234 (353)
T ss_pred CCCCHHHHHHHHHHCCCCEEEEECCHH-HCCCCC---HHHHHHCCCCEEEEEECCHHHCCCCCCCEEEECCHHHHHHHHH
T ss_conf 868999999999748998899605356-418754---0245650787787630416308776623421069999999999
Q ss_pred CCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHCCCCC---CCCCCEEEEEECCHHHHHHHHH
Q ss_conf 2110000135775025789887898862710224789999999987--6417978---9989728999589799999999
Q gi|254780486|r 254 YAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKI--ANKKIGF---SSQSHIQSIVIGDNKSCLNIAK 328 (381)
Q Consensus 254 ~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~--~~~~~g~---~~~s~I~~v~~gd~~~a~~~~~ 328 (381)
.-.++. +-+.+-+..+++.++|+ +.....+....+...++++ ....+|+ ++.+..+.+.. ....+.++.+
T Consensus 235 ~~~~~~-~~~v~~~a~~aa~aal~---d~~~~~~~~~~~~~~R~~l~~~L~~lg~~v~ps~anFvl~~~-~~~~a~~~~~ 309 (353)
T PRK05387 235 VKNSFN-SYPLDRLAQAGAIAAIE---DEAYFEETCAKVIATRERLVEELEALGFEVLPSAANFVFARH-PQHDAAALAA 309 (353)
T ss_pred HHHHCC-CCCCCHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCEEEEEC-CCCCHHHHHH
T ss_conf 985416-77766999999999963---859999999999999999999999689878989885899989-9999999999
Q ss_pred HHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9997791898622888888870399962878999999999999999988
Q gi|254780486|r 329 NLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 329 ~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
+|+++||+|+.+..|- ....+||++. |.||+++++++|+++++
T Consensus 310 ~L~~~gI~VR~~~~~~---l~~~iRisvg---t~een~~l~~al~~il~ 352 (353)
T PRK05387 310 ALRERGIIVRHFNKPR---IDQFLRITIG---TDEECEALVDALKEILA 352 (353)
T ss_pred HHHCCCEEEEECCCCC---CCCEEEEECC---CHHHHHHHHHHHHHHHC
T ss_conf 9980993999799899---9998999729---99999999999999974
No 125
>PRK07212 consensus
Probab=99.92 E-value=1.9e-21 Score=153.84 Aligned_cols=328 Identities=13% Similarity=0.117 Sum_probs=192.7
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC----CCCEEEECCCCHH
Q ss_conf 897689803446566779889999999999863786887224436885899999999840128----8851674166024
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG----FEKMLYFGSGYAA 102 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g----~e~al~~~sG~~A 102 (381)
+|+++++|+..|- .+...|.++++..++++ .--++.+-+ .|..++.+++-+.+.+.+| .|..++.+.+-.|
T Consensus 29 ~G~dvi~l~~g~p-df~~p~~i~ea~~~~~~-~~~~~Y~~~---~G~~~lr~aia~~~~~~~g~~v~p~~I~vt~G~~~a 103 (378)
T PRK07212 29 EGVDVISLSVGEP-DFDTPKHICDAAIDAMD-RGKTHYAPS---NGIPELREAIAEKLRTENHIDVTPDDVIVTPGAKQA 103 (378)
T ss_pred CCCCEEECCCCCC-CCCCCHHHHHHHHHHHH-CCCCCCCCC---CCCHHHHHHHHHHHHHHHCCCCCHHEEEEECCHHHH
T ss_conf 6998379989889-99988999999999985-799988999---999999999999999984899873319994789999
Q ss_pred HHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCC--C---HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC
Q ss_conf 565566631689710045420267752666408764030568--8---14789976431000247860797146215766
Q gi|254780486|r 103 NMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHN--N---INSFAENINKWRKSGGKGFPWIVVESIYSMDG 177 (381)
Q Consensus 103 n~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~Hn--D---~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G 177 (381)
-..++.++++|||.|+...=.-......+++.+++.+.++-+ | .+++++.+. .+.+.+++.-.=.. .|
T Consensus 104 l~~~~~~l~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~vpl~~~~~~~~~~l~~~i~------~~~k~i~l~~P~NP-tG 176 (378)
T PRK07212 104 IYEAMMAVLDDGDEVILLDPAWVSYEACIKFAGGKPVWVPLNPEDFQLPDDLAEAIT------DKTKLIVVNSPSNP-TG 176 (378)
T ss_pred HHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCC------CCCEEEEECCCCCC-CC
T ss_conf 999999847998989981796342568999719969998355567852899998566------57829998899799-89
Q ss_pred CHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCC
Q ss_conf 134---6899999863136089861311222347776401100001346521001346565302---6752451001000
Q gi|254780486|r 178 DKA---PLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYL 251 (381)
Q Consensus 178 ~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l 251 (381)
.+- .+++|.++|++||++++.||+|+.-++|..-..+....+..+++|+++||||+|+..| ||+.+++++++.+
T Consensus 177 ~v~s~~~l~~l~~la~~~~~~ii~DEiY~~l~~~~~~~~~~~l~~~~~~~i~~~S~SK~~~l~GlRvG~~~~~~~~i~~~ 256 (378)
T PRK07212 177 AVFGKESLQGVADLAVDHDLYVLSDEIYEKIIYGKEHISLGSLDGMADRTITINGFSKAYAMTGWRLGYLTAPEEIIKQM 256 (378)
T ss_pred CCCCCHHHHHHHHHHHHHCCEECCCCCHHHHHCCCCCCCHHHCCCCCCCCCEECCCCCCCCCCCEEEEEEECCHHHHHHH
T ss_conf 88471768899997774245013300115440488777743344545554033354213677760489897399999999
Q ss_pred CCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCCCCCC---CCCC-EEEEEECCHHHHHHH
Q ss_conf 0121100001357750257898878988627-1022478999999998764179789---9897-289995897999999
Q gi|254780486|r 252 INYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKKIGFS---SQSH-IQSIVIGDNKSCLNI 326 (381)
Q Consensus 252 ~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~~g~~---~~s~-I~~v~~gd~~~a~~~ 326 (381)
... ..+..+ ..+.....++.++++..++- .++++.++++.....+. ....++. +++. ...+.++. ...++
T Consensus 257 ~~~-~~~~~~-~~~~~~q~aa~~al~~~~~~l~~~~~~~~~~r~~l~~~-L~~~g~~~~~p~g~~~~~~~~~~--~~~~~ 331 (378)
T PRK07212 257 GKV-QSHSVS-SATTFVQYGGVAALKGPQDCVEEMRDEFEARRDILIDG-LADMGLECAPPDGAFYAFPNVDG--DDTAV 331 (378)
T ss_pred HHH-HHHCCC-CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-HHHCCCEECCCCEEEEEEEECCC--CHHHH
T ss_conf 999-864557-88769999999999687788999999999999999999-99769866268816999997899--99999
Q ss_pred HHHHH-HCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999-779189862288888887039996287899999999999999998
Q gi|254780486|r 327 AKNLQ-KKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 327 ~~~L~-~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
+++|+ +.||.+.|...=- + ...+|+++. .++|++++.++.|++++
T Consensus 332 ~~~ll~~~gV~v~pG~~Fg-~--~g~iRl~~a--~~~e~l~eal~RL~~~L 377 (378)
T PRK07212 332 AERLLKDAHVAVTPGSAFG-A--PGWIRISYA--TSMERLKEALERLEKVL 377 (378)
T ss_pred HHHHHHHCCEEEEECCCCC-C--CCEEEEEEE--CCHHHHHHHHHHHHHHH
T ss_conf 9999970989998174459-9--993999980--89999999999999985
No 126
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.92 E-value=4.7e-22 Score=157.60 Aligned_cols=316 Identities=20% Similarity=0.291 Sum_probs=196.8
Q ss_pred CEEEECCCCCCCCCCCCHHHHHHHHHHHH--HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-CC-CEEEECCCCHHH-
Q ss_conf 76898034465667798899999999998--63786887224436885899999999840128-88-516741660245-
Q gi|254780486|r 29 QDIWDFTSHDYLALSSSTLLREKILSSLD--SKIPIGSGGSRLLCGNYNQHLELEEEAADFFG-FE-KMLYFGSGYAAN- 103 (381)
Q Consensus 29 ~~~l~f~s~dYLGl~~~p~v~~a~~~a~~--~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g-~e-~al~~~sG~~An- 103 (381)
.+.++|+||-. -+.-.|.+.++..++++ .+|+- +.+.+|.+++|+++| .+ +-++...|-..-
T Consensus 22 ~~~i~LssNen-P~gp~~~~~~~~~~~~~~~~rYPd------------~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i 88 (356)
T COG0079 22 PGIIKLSSNEN-PYGPPPKVIEAIRAALDKLNRYPD------------PDYRELRAALAEYYGVVDPENVLVGNGSDELI 88 (356)
T ss_pred CCCEEECCCCC-CCCCCHHHHHHHHHHHHHHHCCCC------------CCHHHHHHHHHHHHCCCCCCEEEEECCHHHHH
T ss_conf 65546247889-999989999999987888642999------------61799999999984799802399827848999
Q ss_pred HHHHHHHCCCCCCCCHHHHCCHHHH-HHHHHCCCCCEEECCCCH-HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH
Q ss_conf 6556663168971004542026775-266640876403056881-47899764310002478607971462157661346
Q gi|254780486|r 104 MAILSTLPQATDLIVYDKLVHASIR-EGINSGKAQAIAIPHNNI-NSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP 181 (381)
Q Consensus 104 ~~~i~~l~~~~d~ii~D~~~HaSi~-~g~~ls~a~~~~f~HnD~-~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap 181 (381)
..++.+++.++|-|++=.-. -+++ .-++..+++++.++..+. .+++..+..... +.+.+++.-.=.. +|..-+
T Consensus 89 ~~l~~~~~~~gd~vl~~~Pt-f~~Y~~~a~~~g~~~~~v~~~~~~~d~~~~~~~~~~---~~~lv~i~nPNNP-TG~~~~ 163 (356)
T COG0079 89 ELLVRAFVEPGDTVLIPEPT-FSMYEIAAQLAGAEVVKVPLKEFRLDLDAILAAIRD---KTKLVFLCNPNNP-TGTLLP 163 (356)
T ss_pred HHHHHHHHCCCCEEEECCCC-HHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHCC---CCCEEEEECCCCC-CCCCCC
T ss_conf 99999961789859981788-078899999769869994464444588999865146---8888999599599-888769
Q ss_pred HHHHHHHHHHC--CEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCC
Q ss_conf 89999986313--6089861311222347776401100001346521001346565302---675245100100001211
Q gi|254780486|r 182 LDDLVKIANDY--DGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAK 256 (381)
Q Consensus 182 L~~i~~l~~~y--~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~ 256 (381)
.++|.++.+.- +++++||||+.- +++ ..........++++++.||||+||..| ||+.+++++++.++..-.
T Consensus 164 ~~~l~~l~~~~~~~~~vVvDEAY~e--F~~--~~~~~l~~~~~nlivlRTfSKa~gLAGlRlGy~ia~~~~i~~l~~vr~ 239 (356)
T COG0079 164 REELRALLEALPEGGLVVIDEAYIE--FSP--ESSLELLKYPPNLIVLRTFSKAFGLAGLRVGYAIANPELIAALNKVRP 239 (356)
T ss_pred HHHHHHHHHHCCCCCEEEEECCCCC--CCC--CHHHHHHCCCCCEEEEECCHHHHCCCHHCEEEHCCCHHHHHHHHHHCC
T ss_conf 9999999983878858999775310--278--245455214898899954678640211333402089999999998307
Q ss_pred CEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHCCC----CCCCCCCEEEEEECCHHHHHHHHHHH
Q ss_conf 0000135775025789887898862710224789999999987--64179----78998972899958979999999999
Q gi|254780486|r 257 PFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKI--ANKKI----GFSSQSHIQSIVIGDNKSCLNIAKNL 330 (381)
Q Consensus 257 ~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~--~~~~~----g~~~~s~I~~v~~gd~~~a~~~~~~L 330 (381)
|| ++|-+..+++.++++.- +.+.+....+...+.++ ....+ -+++..+.+-+.+++.. +..+.+.|
T Consensus 240 p~----~v~~~a~~aa~aal~~~---~~~~~~~~~~~~~r~rl~~~l~~~~~~~v~pS~aNFvlv~~~~~~-~~~l~~~L 311 (356)
T COG0079 240 PF----NVSSPALAAAIAALRDA---DYLEESVERIREERERLYAALKALGLFGVFPSQANFVLVRVPDAE-AAALAEAL 311 (356)
T ss_pred CC----CCCHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCC-HHHHHHHH
T ss_conf 88----88899999999860248---999999999999999999999737987015588877999758621-99999999
Q ss_pred HHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9779189862288888887039996287899999999999999998873
Q gi|254780486|r 331 QKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 331 ~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
+++||+++.... .+.....+||++. |+||.++++++|.+++++.
T Consensus 312 ~~~giivR~~~~--~~~~~~~lRitvg---t~een~~ll~AL~~~~~~~ 355 (356)
T COG0079 312 LKKGILVRDCSS--VGLLPGYLRITVG---TPEENDRLLAALREVLKGL 355 (356)
T ss_pred HHCCEEEEECCC--CCCCCCEEEEECC---CHHHHHHHHHHHHHHHHCC
T ss_conf 878989985777--7888875999659---8899999999999987315
No 127
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.92 E-value=2.9e-22 Score=158.93 Aligned_cols=332 Identities=15% Similarity=0.176 Sum_probs=211.6
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCC-----CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCH
Q ss_conf 89768980344656677988999999999986378688-----7224436885899999999840128885167416602
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGS-----GGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYA 101 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~-----~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~ 101 (381)
..++++|.---.--| .+..++.+++. .||-|. |..|+-.=..++..+..+.+|+|+|++.+.++|....
T Consensus 15 ~~~~~in~~piq~gg-----~lt~ea~ka~~-~~gdgysvcd~C~~~LD~i~~Ppi~~f~~~la~flg~D~~rlvnGar~ 88 (386)
T PRK09331 15 LEEEMINLDPIQRGG-----RLTPEARKALI-EYGDGYSVCDYCKGRLDKIEKPPIADFHEDLAKFLGMDEARVTPGARE 88 (386)
T ss_pred HHHCCCCCCHHHHCC-----CCCHHHHHHHH-HHCCCCCHHHHHCCHHHCCCCCCHHHHHHHHHHHHCCCEEEECCCCCH
T ss_conf 023133567355269-----68999999999-974887366454110112559988999999999849963785288427
Q ss_pred HHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCC-------CHHHHHHHHHHHHHCCCCCCCEEEECCCCC
Q ss_conf 4565566631689710045420267752666408764030568-------814789976431000247860797146215
Q gi|254780486|r 102 ANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHN-------NINSFAENINKWRKSGGKGFPWIVVESIYS 174 (381)
Q Consensus 102 An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~Hn-------D~~~Le~~l~~~~~~~~~~~~~vv~egv~S 174 (381)
+.++++.++++|||.|+.|.++|-|.+.++.++++..+..++. .++.-.+.+++.....++...++++.-+-.
T Consensus 89 g~qAv~~a~c~~GD~VIl~rnaHyS~~~A~elaG~~~~~v~~~~~~~~~I~~~~~~~~Iee~~~e~gk~~aL~llt~pdy 168 (386)
T PRK09331 89 GKFAVMHALCKKGDYVVLDGLAHYTSYVAAERAGLNVREVPKTGYPDYRITPEAYAEKIEEVEDETGKPPALALLTHVDG 168 (386)
T ss_pred HHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC
T ss_conf 89999998636999798448405999999997598589936877723450800579999999986189855999968886
Q ss_pred CCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE--EEEECCCCCCCCCC
Q ss_conf 7661346899999863136089861311222347776401100001346521001346565302--67524510010000
Q gi|254780486|r 175 MDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG--ALVGSNKIIYDYLI 252 (381)
Q Consensus 175 m~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G--G~i~~~~~ii~~l~ 252 (381)
+.|..+|+++|.++|++||..+++||||+.|.+--++. ....+++++|--|++|+.+ |.+.-+.++++.+-
T Consensus 169 ~yGn~~d~~~i~~iah~~~ip~lvdeA~~~~~~P~~a~-------~~GaD~~v~S~HK~~~s~t~sgvL~~~~e~~d~v~ 241 (386)
T PRK09331 169 NYGNLHDAKKIAKVAHQYGIPLLLNGAYTVGRMPVDGK-------ELGADFIVGSGHKSMAASAPSGVLATTEEYADKVF 241 (386)
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCHH-------HCCCCEEEEECCCCCCCCCCCEEEECCCCHHHHHH
T ss_conf 64454638999999987498189814433577897466-------63998898634544423463124430453015565
Q ss_pred CCCC-------CEECCCC-CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC------C-------CCC
Q ss_conf 1211-------0000135-77502578988789886271022478999999998764179789------9-------897
Q gi|254780486|r 253 NYAK-------PFIYTTS-PSPILAVVACEALKLIKRKPALHKSLLQLINITDKIANKKIGFS------S-------QSH 311 (381)
Q Consensus 253 ~~~~-------~~ifst~-l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~~g~~------~-------~s~ 311 (381)
..++ .+..+|+ .+|. ....++++..+++-..-.+-.++++++.+-..+.-|+. . +++
T Consensus 242 R~s~~~~~Kev~mLgcTs~g~ps--y~LMASfd~vrerv~~~d~ev~~ar~~~~El~kIeG~~~lge~P~~hdl~~fdtt 319 (386)
T PRK09331 242 RTSKKFGVKEVELLGCTLRGAPL--VTLMASFPHVKERVKNWDEEVEKARWFVDELEKIEGFKQLGEKPRNHDLMRFETP 319 (386)
T ss_pred HCCCCCHHHHHHHHCCCCCCCHH--HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCEEECCC
T ss_conf 22643057899885363346408--9998065999999987789999999999998608765540657787774353376
Q ss_pred EEEEEEC-CHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 2899958-97999999999997791898622888888870399962878999999999999999988738
Q gi|254780486|r 312 IQSIVIG-DNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 312 I~~v~~g-d~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
..-.... ...+-..+.+.|.++||..-- |-.+-.+-+ .+...|+|+++.++++|+++.++.+
T Consensus 320 ~~~~ia~~~~~~Gy~l~~~Lk~r~I~ge~------sg~t~~lkl-~s~G~t~E~v~~li~A~keIaeky~ 382 (386)
T PRK09331 320 SFDEIAKKHKRRGFFLYEELKKRGIHGIK------PGLTKEFKL-STYGLTWEQVEYVADSFKEIAEKYG 382 (386)
T ss_pred CEEEEHHHCCCCCEEHHHHHHHCCCEEEE------CCCCEEEEE-EECCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 41222320486605679999767964995------571017878-8617878999999999999999828
No 128
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.91 E-value=1.3e-22 Score=161.05 Aligned_cols=314 Identities=18% Similarity=0.167 Sum_probs=207.8
Q ss_pred EECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHC
Q ss_conf 98034465667798899999999998637868872244368858999999998401288851674166024565566631
Q gi|254780486|r 32 WDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLP 111 (381)
Q Consensus 32 l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~ 111 (381)
++|.|-++=| -+|++.++..++- . -+. ..+|+.+.-+++|+++++.+|++++++++||++||+-++.+++
T Consensus 2 ~~f~SDn~~g--~~~~m~eam~~a~-~-~~~------~~YG~D~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~ 71 (342)
T COG2008 2 IDFRSDNVAG--PTPEMREALAAAN-A-VGD------DVYGEDPTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHC 71 (342)
T ss_pred CCCCCCCCCC--CCHHHHHHHHHCC-C-CCC------CCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHC
T ss_conf 7355576678--7999999998552-4-578------7778888999999999998577449992684388899999864
Q ss_pred CCCCCCCHHHHCCHHHHHH---HHHCCCCCEEECC-----CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH--
Q ss_conf 6897100454202677526---6640876403056-----88147899764310002478607971462157661346--
Q gi|254780486|r 112 QATDLIVYDKLVHASIREG---INSGKAQAIAIPH-----NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP-- 181 (381)
Q Consensus 112 ~~~d~ii~D~~~HaSi~~g---~~ls~a~~~~f~H-----nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap-- 181 (381)
+|+..||+++.+|-..++. ..+++++.++..- -++++++..++. +..+...++.+++|.-----|.+.|
T Consensus 72 ~~~~~vi~~~~aHi~~~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~-~d~~~~~~~~~~~e~~~te~GtVy~l~ 150 (342)
T COG2008 72 QPGESVICHETAHIYTDECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRP-DDIHHAPTPLAVLENTATEGGTVYPLD 150 (342)
T ss_pred CCCCEEEEECCCCCEECCCCCHHHHCCCCEECCCCCCCCCCCHHHHHHHHCC-CCCCCCCCCEEEEEECCCCCCEECCHH
T ss_conf 8997699852531202356758887388543047987787399999976367-776558875079861367786664899
Q ss_pred -HHHHHHHHHHCCEEEEECCCC---CCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCE-EEEEECCCCCCCCCC----
Q ss_conf -899999863136089861311---22234777640110000134652100134656530-267524510010000----
Q gi|254780486|r 182 -LDDLVKIANDYDGFIVVDEAH---ATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSS-GALVGSNKIIYDYLI---- 252 (381)
Q Consensus 182 -L~~i~~l~~~y~~~LivDEah---~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~-GG~i~~~~~ii~~l~---- 252 (381)
|++|.++|++||..|.+|-|- +.-.+|+.- .+ + .+..+.+.-.++|..|.. |+.|+++.+++...+
T Consensus 151 el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~---~~-~-~~~~D~v~~~~tK~g~~~~gAiv~gn~~~~~~a~~~rK 225 (342)
T COG2008 151 ELEAISAVCKEHGLPLHMDGARLANALVALGVAL---KT-I-KSYVDSVSFCLTKGGGAPVGAIVFGNRDFAKRARRWRK 225 (342)
T ss_pred HHHHHHHHHHHHCCCEEECHHHHHHHHHHCCCCH---HH-H-HHHCCEEEEECCCCCCCEEEEEEECCHHHHHHHHHHHH
T ss_conf 9999999999809954404088988998739888---99-8-74288999913147752132589738999999899999
Q ss_pred CCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHH--HHHHHHHHHCCCC----CCCCCCEEEEEECCHH-HHHH
Q ss_conf 1211000013577502578988789886271022478999--9999987641797----8998972899958979-9999
Q gi|254780486|r 253 NYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQL--INITDKIANKKIG----FSSQSHIQSIVIGDNK-SCLN 325 (381)
Q Consensus 253 ~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~--~~~~~~~~~~~~g----~~~~s~I~~v~~gd~~-~a~~ 325 (381)
+.+..+ + -.-.++++.+.. ++++-++....+.| .+.+.+......| .+++++++.+.+++.. ....
T Consensus 226 ~~Ggl~--~--k~r~laA~~~~~---l~~~~~~~~~~Han~mA~~La~~~~~~~G~~~~~~~~tN~vf~~l~~~~i~~l~ 298 (342)
T COG2008 226 RAGGLM--R--KARFLAAQGLYA---LEDDVWRLAADHANAMAARLAEGLEAKPGVKLAFPVETNMVFVRLPESAIEALR 298 (342)
T ss_pred HHCCCH--H--HHHHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCEEEEECCHHHHHHHH
T ss_conf 865627--6--654899999999---731588888788899999999765326894343677662799977767889997
Q ss_pred HHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 999999779189862288888887039996287899999999999999998
Q gi|254780486|r 326 IAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 326 ~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
....++.+|++..+.. ..+||+.+-..|+|||++++..++++.
T Consensus 299 ~~~~~~~~~~~~~~~~--------~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 299 LAGALFYRGVLIGAHG--------EIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred HHCHHHEEEEECCCCC--------CEEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 5152120012215777--------558998502499999999999999964
No 129
>KOG1368 consensus
Probab=99.91 E-value=6.8e-24 Score=169.07 Aligned_cols=307 Identities=18% Similarity=0.210 Sum_probs=208.5
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCC-CCCCCCHHHHCCH
Q ss_conf 999999999986378688722443688589999999984012888516741660245655666316-8971004542026
Q gi|254780486|r 47 LLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQ-ATDLIVYDKLVHA 125 (381)
Q Consensus 47 ~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~-~~d~ii~D~~~Ha 125 (381)
+.+++..+|.. |- -++|+.+.-.+||++.|+++|+|++|+++||++.|+-+|.+.+. |+.-|++|..+|-
T Consensus 37 eMr~am~eA~v---gD------dVyGeD~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~Hc~~rg~eii~gd~~HI 107 (384)
T KOG1368 37 EMRRAMAEASV---GD------DVYGEDPTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVHCHQRGSEIIVGDRAHI 107 (384)
T ss_pred HHHHHHHHCCC---CC------CCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHCCCCCEEEECCCHHE
T ss_conf 99999864534---75------2136785188999999998475412563266531078887874488855784361032
Q ss_pred HHHHH---HHHCCCCCEEECC-C----CHHHHHHHHHHHH-HCCCCCCCEEEECCCCCCCC-CHHHH---HHHHHHHHHC
Q ss_conf 77526---6640876403056-8----8147899764310-00247860797146215766-13468---9999986313
Q gi|254780486|r 126 SIREG---INSGKAQAIAIPH-N----NINSFAENINKWR-KSGGKGFPWIVVESIYSMDG-DKAPL---DDLVKIANDY 192 (381)
Q Consensus 126 Si~~g---~~ls~a~~~~f~H-n----D~~~Le~~l~~~~-~~~~~~~~~vv~egv~Sm~G-~~apL---~~i~~l~~~y 192 (381)
-.|+. ..++++...+.+. | |++++|+.++-.. ..+.+.+.+|+.|----..| -+-|| .++.+||+++
T Consensus 108 ~~~E~gg~s~l~gv~~~tv~~e~dgtm~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~ 187 (384)
T KOG1368 108 HRYEQGGISQLAGVHVRTVKNENDGTMDLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRH 187 (384)
T ss_pred EEHHCCCHHHHCCCEEEEEEECCCCEEEHHHHHHHHCCCCCCCCCCCCEEEEEECCCCCCCCEEEEHHHHHHHHHHHHCC
T ss_conf 12121672110461467543179975569999876218999735897317986213135686674199999999999615
Q ss_pred CEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCC-EEEEEECCCCCCCCCC----CCCCCEECCCCCCCC
Q ss_conf 60898613112223477764011000013465210013465653-0267524510010000----121100001357750
Q gi|254780486|r 193 DGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGS-SGALVGSNKIIYDYLI----NYAKPFIYTTSPSPI 267 (381)
Q Consensus 193 ~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~-~GG~i~~~~~ii~~l~----~~~~~~ifst~l~P~ 267 (381)
|..|.+|-|--+-.--..|-++-.+....|-+-+ -|||++|+ .|..+.|++++|+.-+ ..+.+.. .+-.
T Consensus 188 glkLH~DGARi~NAavasgV~vk~i~~~fDSVsi--CLSKglgAPVGSViVG~k~FI~kA~~~RKalGGGmR----QsGv 261 (384)
T KOG1368 188 GLKLHMDGARIFNAAVASGVPVKKICSAFDSVSI--CLSKGLGAPVGSVIVGSKDFIDKARHFRKALGGGMR----QSGV 261 (384)
T ss_pred CCEEECCHHHHHHHHHHCCCCHHHHHHHHHHHHH--HHHCCCCCCCCCEEECCHHHHHHHHHHHHHHCCCHH----HHHH
T ss_conf 9715336266655787719989999876324243--553557887401787528899998999997568613----7779
Q ss_pred HHHHHHHHHHH----HHHCCCHHHHHHHHHHHHHHHHHCCCCCC-CCCCEEEEEECCH-HHHHHHHHHHHHCCEEEEEEC
Q ss_conf 25789887898----86271022478999999998764179789-9897289995897-999999999997791898622
Q gi|254780486|r 268 LAVVACEALKL----IKRKPALHKSLLQLINITDKIANKKIGFS-SQSHIQSIVIGDN-KSCLNIAKNLQKKGFDIRAIR 341 (381)
Q Consensus 268 ~~aaa~aal~~----l~~~~~~~~~l~~~~~~~~~~~~~~~g~~-~~s~I~~v~~gd~-~~a~~~~~~L~~~Gi~v~~i~ 341 (381)
++++++-+|+. |+.+ +++..+++++..+........+ .++.|+.+.+-.+ -.+.++++.+.+.||.+..
T Consensus 262 LaaaaLval~~~~~~L~~d---Hk~A~~lAe~~~~~~~i~v~v~a~etNiv~~~l~q~~~~~~~l~~~~~k~gi~lm~-- 336 (384)
T KOG1368 262 LAAAALVALDENVPLLRAD---HKRAKELAEYINTPEEIRVEVPAVETNIVNMVLCQARLTAEELCKFLEKNGILLMG-- 336 (384)
T ss_pred HHHHHHHHHHCCHHHHHHH---HHHHHHHHHHHCCCCCEEEECCHHHCCEEEEECCCCCCCHHHHHHHHHHCCEEEEE--
T ss_conf 9998898763122777877---99999999986466663463221312332111025667899999889877858861--
Q ss_pred CCCCCCCCCEEEEECCCCCCHHHHHHHHHHH-HHHHHH
Q ss_conf 8888888703999628789999999999999-999887
Q gi|254780486|r 342 PPTVPINTARLRISITLNVDEPTIVKLFDIL-PQIISE 378 (381)
Q Consensus 342 ~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l-~~v~~E 378 (381)
..+.|+|++++-..|+++++.+..++ +.++.+
T Consensus 337 -----~~s~r~Rivlh~Qvt~~~ve~~~~~~~k~~~~q 369 (384)
T KOG1368 337 -----GASRRIRIVLHHQVTDEDVEYVKSVLSKKFLKQ 369 (384)
T ss_pred -----CCCCCEEEEEEEECCHHHHHHHHHHHHHHHHHH
T ss_conf -----466624899998437899999999999999852
No 130
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.91 E-value=1.8e-21 Score=153.99 Aligned_cols=337 Identities=14% Similarity=0.068 Sum_probs=196.3
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCHHHHHHHHHHHHHCCC----CCEEEECCC-C
Q ss_conf 8976898034465667798899999999998637868-872244368858999999998401288----851674166-0
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIG-SGGSRLLCGNYNQHLELEEEAADFFGF----EKMLYFGSG-Y 100 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~-~~~sr~~~G~~~~~~~lE~~lA~~~g~----e~al~~~sG-~ 100 (381)
+|+++|+|+.-+ =.+...|.+++++.+++.+ -+.+ .+. ..|..++-+++-+.+.+.+|. |+-++..+| .
T Consensus 25 ~~~~iI~l~~G~-pd~~~p~~v~~a~~~al~~-~~~~~Y~~---~~G~~~LR~aia~~~~~~~g~~~~~~~~I~vt~Ga~ 99 (389)
T PRK05957 25 ENPGTISLGQGV-VSYPPPPEAIEALNNFLAN-PENHLYQS---VQGIPPLLEAITQKLQADNGIEINNENAIVVTAGSN 99 (389)
T ss_pred CCCCCEECCCCC-CCCCCCHHHHHHHHHHHHC-CCCCCCCC---CCCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHH
T ss_conf 599938899989-9999889999999999828-67886899---757499999999999999689989898899887889
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC-----CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
Q ss_conf 245655666316897100454202677526664087640305-----688147899764310002478607971462157
Q gi|254780486|r 101 AANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP-----HNNINSFAENINKWRKSGGKGFPWIVVESIYSM 175 (381)
Q Consensus 101 ~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~-----HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm 175 (381)
.|...++.++++|||.|+...=.-.+....+++.+++.+.++ .-|+++|++.+.. +.+.+++.-.=..
T Consensus 100 ~al~~~~~al~~pGD~Vlv~~P~Y~~~~~~~~~~g~~~v~vp~d~~~~~~~~~l~~~i~~------~~k~iil~~P~NP- 172 (389)
T PRK05957 100 MAFMNAILAITDPGDEIILNTPYYFNHEMAITMAGCQPVLVPTDENYQLRPEAIEAAITP------KTRAIVTISPNNP- 172 (389)
T ss_pred HHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHCCC------CCEEEECCCCCCC-
T ss_conf 999999999759999899778877668999997499358865799889799999984510------2627861899899-
Q ss_pred CCCH---HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC-EEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCC
Q ss_conf 6613---468999998631360898613112223477764-01100001346521001346565302---6752451001
Q gi|254780486|r 176 DGDK---APLDDLVKIANDYDGFIVVDEAHATGVCGPLGK-GLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIY 248 (381)
Q Consensus 176 ~G~~---apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~-G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii 248 (381)
.|.+ ..+++|.++|++||++++.||+|+.-++...-. ......+..+++|.++||||.|+..| ||++++++++
T Consensus 173 TG~v~s~~~l~~l~~la~~~~~~ii~DE~Y~~l~~~~~~~~s~~~~~~~~~~vI~i~S~SK~~~~~G~RvG~~v~~~~l~ 252 (389)
T PRK05957 173 TGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFSPGSIPGSGNHTISLYSLSKAYGFASWRIGYMVIPIHLL 252 (389)
T ss_pred CCCCCCHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHH
T ss_conf 89887677899999876067818998984321345886667765445634543013444312446564348898389999
Q ss_pred CCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCCCC---CC-CCCC-EEEEEECCHHH
Q ss_conf 0000121100001357750257898878988627-10224789999999987641797---89-9897-28999589799
Q gi|254780486|r 249 DYLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKKIG---FS-SQSH-IQSIVIGDNKS 322 (381)
Q Consensus 249 ~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~~g---~~-~~s~-I~~v~~gd~~~ 322 (381)
+.+....... .. ..+...-.++.++++.-++. .+..+.++++.+...+......+ +. ..+. .+.+.+.....
T Consensus 253 ~~~~~~~~~~-~~-~~~~~~Q~aa~~al~~~~~~~~~~~~~~~~~r~~~~~~l~~~~~~~~~~~p~G~f~~~~~~~~~~~ 330 (389)
T PRK05957 253 EAIKKIQDTI-LI-CPPVVSQYAALGALQVGKSYCQQHLPEIAQVRQILLKSLAQLQDWCFLHPANGAFYCFLKVNTDLN 330 (389)
T ss_pred HHHHHHHHHC-CC-CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEEECCCCCC
T ss_conf 9999998545-67-853999999999997799999999999999999999999856897266079857999897898969
Q ss_pred HHHHHHHHH-HCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999-779189862288888887039996287899999999999999998873
Q gi|254780486|r 323 CLNIAKNLQ-KKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 323 a~~~~~~L~-~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
..+++++|+ ++||.+.|...=. +.+...+|++.++. ++|++++.++.|.+.++|+
T Consensus 331 ~~~~~~~ll~e~gV~v~PG~~Fg-~~~~~~~Rlsf~~~-~~e~l~eg~~RL~~alk~~ 386 (389)
T PRK05957 331 DFELVKQLIRDYRVAVIPGSTFG-MKNGCYLRIAYGAL-QKATAKEGIERLVQGLKTI 386 (389)
T ss_pred HHHHHHHHHHHCCEEEECCHHHC-CCCCCEEEEEECCC-CHHHHHHHHHHHHHHHHHH
T ss_conf 99999999997999997873108-89999899985429-9999999999999999999
No 131
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.91 E-value=8.2e-22 Score=156.12 Aligned_cols=338 Identities=15% Similarity=0.176 Sum_probs=199.2
Q ss_pred HHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 89999999999759839992897689803446566779889999999999863786887224436885899999999840
Q gi|254780486|r 7 SFYEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAAD 86 (381)
Q Consensus 7 ~~~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~ 86 (381)
.|+...+.+++.=-.-..-.+..+++-+++|-= -+.-.|.+.++..+++.....+ .| + ....+.+|-+.||+
T Consensus 3 ~~~r~~i~~l~~Y~p~~~~~~~~~~ikL~~NEn-p~g~p~~v~eai~~~~~~~~~~----~r--Y-Pd~~~~~Lr~aiA~ 74 (369)
T PRK02610 3 PFLRSDLAQLKAYHPHPSGDTAPALDRLDTNES-PYDLPTDLKQKLAWLYQQGIAS----NR--Y-PDGGHLALKQAIAE 74 (369)
T ss_pred CCCCHHHHCCCCCCCCCCCCCCCCCEECCCCCC-CCCCCHHHHHHHHHHHHCCHHC----CC--C-CCCCHHHHHHHHHH
T ss_conf 754533644899999986667878257239898-9999989999999998703120----65--9-99987999999998
Q ss_pred HCCC---------CCEEEECCCCHHHH-HHHHHHCCC-CCCC-CHHHHCCHHHH-HHHHHCCCCCEEECCC------CHH
Q ss_conf 1288---------85167416602456-556663168-9710-04542026775-2666408764030568------814
Q gi|254780486|r 87 FFGF---------EKMLYFGSGYAANM-AILSTLPQA-TDLI-VYDKLVHASIR-EGINSGKAQAIAIPHN------NIN 147 (381)
Q Consensus 87 ~~g~---------e~al~~~sG~~An~-~~i~~l~~~-~d~i-i~D~~~HaSi~-~g~~ls~a~~~~f~Hn------D~~ 147 (381)
++|. ++.+++..|-.--+ .++.+.+.+ ++.| +.+. ..+++ ..+++.+++++.++.. |++
T Consensus 75 ~~~~~~~~~~~v~~e~I~vgnGs~eli~~l~~a~~~~~~~~vl~~~P--tf~~Y~~~a~~~g~~~~~v~~~~~~f~~d~~ 152 (369)
T PRK02610 75 YVNESTAGSWQITPANISVGNGSDELIRSLLIATCLGGEGSILVAEP--TFSMYGILAQTLGIPVVRVGRDPENFEIDLA 152 (369)
T ss_pred HHCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEECCC--CHHHHHHHHHHCCCEEEEECCCCCCCCCCHH
T ss_conf 85755455568981569984899999999999995489985996787--6558999999759627994576436656989
Q ss_pred HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHH-CCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCC
Q ss_conf 78997643100024786079714621576613468999998631-36089861311222347776401100001346521
Q gi|254780486|r 148 SFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIAND-YDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIV 226 (381)
Q Consensus 148 ~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~-y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv 226 (381)
.+++.+.+... + ...+|++-.=--=+|.+-+..++..|.+. .+.++++|||+. -+.+ ..........+++|+
T Consensus 153 ~~~~~i~~~~~--~-~~klv~l~nPNNPTG~~~~~~~l~~l~~~~~~~~vvvDEaY~-ef~~---~s~~~~~~~~~Nliv 225 (369)
T PRK02610 153 AAQTAIEQTQN--P-PVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYF-EFSQ---TTLVPELAQHPNWVI 225 (369)
T ss_pred HHHHHHHHCCC--C-CCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCEE-ECCC---CCCCHHHHCCCCEEE
T ss_conf 99999985559--8-823999789969726567999999998469976998336760-2155---532102431787589
Q ss_pred CCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HH
Q ss_conf 001346565302---6752451001000012110000135775025789887898862710224789999999987--64
Q gi|254780486|r 227 MHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKI--AN 301 (381)
Q Consensus 227 ~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~--~~ 301 (381)
+.||||+||..| ||+.+++++++.+...-.+| ..+-...+++.++|+ +.....+...++.+.++++ ..
T Consensus 226 lrTfSK~~glaGlRlGy~ia~~~~i~~l~~~~~p~----~v~~~a~~aa~~aL~---~~~~~~~~~~~~~~eR~~l~~~L 298 (369)
T PRK02610 226 LRTFSKAFRLAAHRVGYAIGHPELIAVLEKVRLPY----NLPSFSQAAAQLALE---HRDELLAAIPEILQERDKLYRAL 298 (369)
T ss_pred EECCCHHHCCCCCCCEECCCCHHHHHHHHHHCCCC----CCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 85263440676655131117999999999824998----848999999999976---94999999999999999999999
Q ss_pred CCC-C---CCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 179-7---899897289995897999999999997791898622888888870399962878999999999999999988
Q gi|254780486|r 302 KKI-G---FSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 302 ~~~-g---~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
..+ | +++.+..+.+.+.....+..+.++|+++||+|+.. ...|||++. |+||.++++++|+++++
T Consensus 299 ~~l~g~~v~ps~aNFil~~~~~~~~~~~~~~~L~~~Gi~VR~~--------~~~lRIsvg---t~een~~~l~~Lk~~L~ 367 (369)
T PRK02610 299 QELPQLRVWPSAANFLFLRLQGAQDLAALHQALKNQGTLVRHT--------AGGLRITIG---TPEENQRTLARLQAALT 367 (369)
T ss_pred HHCCCCEECCCCCEEEEEECCCCCCHHHHHHHHHCCCEEECCC--------CCEEEEEEC---CHHHHHHHHHHHHHHHH
T ss_conf 8679977899986089998899756999999998299099989--------990899949---99999999999999996
Q ss_pred HH
Q ss_conf 73
Q gi|254780486|r 378 EG 379 (381)
Q Consensus 378 E~ 379 (381)
||
T Consensus 368 ~~ 369 (369)
T PRK02610 368 QL 369 (369)
T ss_pred HC
T ss_conf 19
No 132
>PRK08068 transaminase; Reviewed
Probab=99.91 E-value=2.7e-21 Score=152.90 Aligned_cols=331 Identities=14% Similarity=0.094 Sum_probs=191.5
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHHHHCCCC-----CEEEECCCC
Q ss_conf 897689803446566779889999999999863786-88722443688589999999984012888-----516741660
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPI-GSGGSRLLCGNYNQHLELEEEAADFFGFE-----KMLYFGSGY 100 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~-~~~~sr~~~G~~~~~~~lE~~lA~~~g~e-----~al~~~sG~ 100 (381)
.|+++++|+--+= .+...+.+++++.+++.. -.+ +.+.+ .|..++-+++-+.+.+.+|.+ +.++++.+.
T Consensus 30 ~G~~vi~l~~G~P-d~~~p~~i~~a~~~~~~~-~~~~~Y~~~---~G~~~LR~aia~~~~~~~g~~~~p~~eI~vt~Ga~ 104 (389)
T PRK08068 30 EGHDVINLGQGNP-DQPTPEHIVEALQEAAEN-PANHKYSPF---RGYPFLKEAAADFYKREYGVTLDPETEVAILFGGK 104 (389)
T ss_pred CCCCCEECCCCCC-CCCCCHHHHHHHHHHHCC-CCCCCCCCC---CCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHH
T ss_conf 7999189999889-999899999999999738-767888998---58099999999999998689989888099827889
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC---C----CHHHHHHHHHHHHHCCCCCCCEEEECCCC
Q ss_conf 2456556663168971004542026775266640876403056---8----81478997643100024786079714621
Q gi|254780486|r 101 AANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH---N----NINSFAENINKWRKSGGKGFPWIVVESIY 173 (381)
Q Consensus 101 ~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H---n----D~~~Le~~l~~~~~~~~~~~~~vv~egv~ 173 (381)
.|-..++.+++++||.|++..=.-.+....+++.+++.+.++- | |+++|++.+.. +.+.+++.-.=.
T Consensus 105 ~al~~~~~al~~pGD~Vlv~~P~Yp~y~~~~~~~g~~~~~vpl~~~~~~~~d~e~l~~~i~~------~tk~iil~~P~N 178 (389)
T PRK08068 105 AGLVELPQCLLNPGDTALVPDPGYPDYLSGVALARAQFETMPLIAENNFLPDYEKIPESVAE------KAKLMYLNYPNN 178 (389)
T ss_pred HHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCHH------CCEEEEECCCCC
T ss_conf 99999999966999989980788986499999718756899636667986899999874310------465999889979
Q ss_pred CCCCCHHH---HHHHHHHHHHCCEEEEECCCCCCCCC-CCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCC
Q ss_conf 57661346---89999986313608986131122234-7776401100001346521001346565302---67524510
Q gi|254780486|r 174 SMDGDKAP---LDDLVKIANDYDGFIVVDEAHATGVC-GPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKI 246 (381)
Q Consensus 174 Sm~G~~ap---L~~i~~l~~~y~~~LivDEah~~Gv~-G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ 246 (381)
. .|.+.+ +++|.++|++||++++.||+|+.-++ |..-.......+..+..|.++||||+|+..| ||+.++++
T Consensus 179 P-TG~v~~~~~l~~l~~la~~~~i~visDEiY~~l~~~~~~p~s~l~~~~~~~~~I~~~S~SK~~~~~G~RiG~~v~~~~ 257 (389)
T PRK08068 179 P-TGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQKPVSFLQTPGAKDVGIEIYTLSKTFNMAGWRVAFAVGNES 257 (389)
T ss_pred C-CCHHCCHHHHHHHHHHHHCCCEEEEECCCCCCEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEECCHH
T ss_conf 8-461205999999999871077799962652111467876641103653201340661035655786311799977999
Q ss_pred CCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCCCCCCC---C-CCEEEEEECCHH
Q ss_conf 010000121100001357750257898878988627-10224789999999987641797899---8-972899958979
Q gi|254780486|r 247 IYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKKIGFSS---Q-SHIQSIVIGDNK 321 (381)
Q Consensus 247 ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~~g~~~---~-s~I~~v~~gd~~ 321 (381)
+++.++.. ..+++.+ .+++...++.+++..-++. .++++..+++...+.+ ....+|+.. + +...-+.+.+..
T Consensus 258 ~i~~l~~~-~~~~~~~-~~~~~q~aa~~al~~~~~~~~~~~~~~~~rr~~~~~-~l~~~g~~~~~P~G~~y~w~~~~~~~ 334 (389)
T PRK08068 258 VIEAINLL-QDHLFVS-LFGAIQDAAIEALLSDQSCVQELVARYESRRNAFIS-ACREIGWEVDAPKGSFFAWMPVPKGY 334 (389)
T ss_pred HHHHHHHH-CCCCEEC-CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-HHHHCCCEECCCCEEEEEEEECCCCC
T ss_conf 99999973-0253004-784999999999868888999999999999999999-99975976058881359978689998
Q ss_pred HHHHHHHHHHHC-CEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 999999999977-918986228888888703999628789999999999999999
Q gi|254780486|r 322 SCLNIAKNLQKK-GFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 322 ~a~~~~~~L~~~-Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
...+++..|+++ ||.+.|...= -+.+...+|++.. .++++++..++.|+++
T Consensus 335 ~~~~~~~~ll~~~gV~v~PG~~F-g~~g~~~vRl~fa--~~~e~l~ea~~RL~~l 386 (389)
T PRK08068 335 TSEQFADLLLEKAHVAVAPGNGF-GEHGEGYVRVGLL--IDEERLREAINRIAKL 386 (389)
T ss_pred CHHHHHHHHHHCCCEEEECCHHH-CCCCCCEEEEEEE--CCHHHHHHHHHHHHHC
T ss_conf 98999999997099999878543-7899696999983--8999999999999724
No 133
>PRK09295 selenocysteine lyase; Validated
Probab=99.91 E-value=8.5e-21 Score=149.79 Aligned_cols=349 Identities=13% Similarity=0.150 Sum_probs=212.3
Q ss_pred HHHHHHCCCEEE-ECCCCEEEECCCCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCC-CCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 999997598399-9289768980344656677-98899999999998637868872-24436885899999999840128
Q gi|254780486|r 13 LQKIKSKGRHRQ-LLRRQDIWDFTSHDYLALS-SSTLLREKILSSLDSKIPIGSGG-SRLLCGNYNQHLELEEEAADFFG 89 (381)
Q Consensus 13 l~~~~~~g~~~~-~~~~~~~l~f~s~dYLGl~-~~p~v~~a~~~a~~~~~g~~~~~-sr~~~G~~~~~~~lE~~lA~~~g 89 (381)
++++|++-.... .++|+.++-| |+=+-+ -.+.|+++..+.....|+...++ .++-.-.....++.-+.+|+|+|
T Consensus 5 ~~~vR~~FP~l~~~~~~~~~iYl---DnaAtt~~p~~Vi~a~~~~~~~~~~n~~~~~~~~~~~a~~~~e~aR~~iA~~lg 81 (406)
T PRK09295 5 VEKVRADFPVLSREVNGLPLAYL---DSAASAQKPSQVIDAEAEFYRHGYAAVHRGIHTLSAQATEKMENVRKQASLFIN 81 (406)
T ss_pred HHHHHHHCCCCCCCCCCCCEEEE---CCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 89998559676677689975995---288537899999999999998656988864138999999999999999999749
Q ss_pred CC--CEEEE-CCCCHHHHHHHHHH----CCCCCCCCHHHHCCHHHHHHHH----HCCCCCEEEC-----CCCHHHHHHHH
Q ss_conf 88--51674-16602456556663----1689710045420267752666----4087640305-----68814789976
Q gi|254780486|r 90 FE--KMLYF-GSGYAANMAILSTL----PQATDLIVYDKLVHASIREGIN----SGKAQAIAIP-----HNNINSFAENI 153 (381)
Q Consensus 90 ~e--~al~~-~sG~~An~~~i~~l----~~~~d~ii~D~~~HaSi~~g~~----ls~a~~~~f~-----HnD~~~Le~~l 153 (381)
.+ +-++| ++++.++-.++..+ .+++|.|+.-..-|.|.....+ -.++++..++ .-|+++|++.+
T Consensus 82 a~~~~eIvFts~~Tea~N~~~~~~~~~~~~~gd~vi~s~~EH~s~~~pw~~l~~~~G~~v~~vp~~~~g~id~~~l~~~i 161 (406)
T PRK09295 82 ARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLNPDGTLQLETLPALF 161 (406)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHH
T ss_conf 99989699937816998888866688605898989994664287888999999964962489803899848599999875
Q ss_pred HHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCC
Q ss_conf 43100024786079714621576613468999998631360898613112223477764011000013465210013465
Q gi|254780486|r 154 NKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKA 233 (381)
Q Consensus 154 ~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa 233 (381)
+. .+.+|.+-.+-...|.+-|+++|.++|+++|+.++||-+|++|.+ + .+ ....+.++++.|.-|-
T Consensus 162 ~~-------~T~LVsv~~vsn~~G~i~pv~~I~~~~~~~g~~~~vDaaQ~~g~~-~-----id-v~~l~~D~~~~S~HKl 227 (406)
T PRK09295 162 DE-------RTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHH-P-----VD-VQALDCDFYVFSGHKL 227 (406)
T ss_pred CC-------CCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCC-C-----CC-HHHHHCCEEEEEHHHC
T ss_conf 37-------963999971367888717899999988755854896423466810-5-----54-6663154799861422
Q ss_pred CCCEE-EEEECCCCCCCCCCC--CC-----------------CCEECC-CCCCCCHHHHHHHHHHHHHHC--CCHHHHHH
Q ss_conf 65302-675245100100001--21-----------------100001-357750257898878988627--10224789
Q gi|254780486|r 234 LGSSG-ALVGSNKIIYDYLIN--YA-----------------KPFIYT-TSPSPILAVVACEALKLIKRK--PALHKSLL 290 (381)
Q Consensus 234 ~g~~G-G~i~~~~~ii~~l~~--~~-----------------~~~ifs-t~l~P~~~aaa~aal~~l~~~--~~~~~~l~ 290 (381)
+|-.| |++..++++.+.+.- .+ .++.|- +.++.+..++..++++.+.+. +..++..+
T Consensus 228 ~GP~G~G~Lyv~~~~~~~l~P~~~GG~~~~~~~~~~~~~~~~~p~rfe~GT~n~~~i~gl~aAl~~~~~~g~~~i~~~~~ 307 (406)
T PRK09295 228 YGPTGIGILYVKEALLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIAEYEQ 307 (406)
T ss_pred CCCCCEEEEEECHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_conf 69981499998334563178631688631100345675535652220588876889999999999999718899999999
Q ss_pred HHHHHHHHHHHCCC-----CCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECC---CCCCC--CCCEEEEECCCCC
Q ss_conf 99999998764179-----78998972899958979999999999977918986228---88888--8703999628789
Q gi|254780486|r 291 QLINITDKIANKKI-----GFSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRP---PTVPI--NTARLRISITLNV 360 (381)
Q Consensus 291 ~~~~~~~~~~~~~~-----g~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~---PtVp~--~~~rlRi~v~a~~ 360 (381)
++.+++.......- +-....+|+++.++. ..+..+...|-++||.++.-.. |.... -.+.+|++++..+
T Consensus 308 ~L~~~l~~~L~~~~~v~~~gp~~r~~ivsf~~~~-~~~~~v~~~L~~~gI~vr~G~~Ca~~~~~~~~~~~~iRvS~~~yn 386 (406)
T PRK09295 308 NLMHYALSQLEQVPDLTLYGPQNRLGVIAFNLGK-HHAYDVGSFLDNYGIAVRTGHHCAMPLMAYYNVPAMCRASLAMYN 386 (406)
T ss_pred HHHHHHHHHHHCCCCEEEECCCCCCEEEEEECCC-CCHHHHHHHHHHCCEEEECCHHHHHHHHHHHCCCCEEEEECCCCC
T ss_conf 9999999997369998995887755079997389-899999999854998997634333044576289967999788999
Q ss_pred CHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999999998873
Q gi|254780486|r 361 DEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 361 t~edi~~~~~~l~~v~~E~ 379 (381)
|+||||+++++|+++.+=+
T Consensus 387 T~eeId~lv~aL~~I~k~l 405 (406)
T PRK09295 387 THEEVDRLVAGLQRIHRLL 405 (406)
T ss_pred CHHHHHHHHHHHHHHHHHH
T ss_conf 9999999999999999972
No 134
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.91 E-value=1.5e-21 Score=154.50 Aligned_cols=345 Identities=13% Similarity=0.090 Sum_probs=204.1
Q ss_pred HHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC-
Q ss_conf 9999997598399928976898034465667798899999999998637868872244368858999999998401288-
Q gi|254780486|r 12 RLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF- 90 (381)
Q Consensus 12 ~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~- 90 (381)
++++++++.+ ...+|.+++||+--+= .+...+.|++++.+++. .-.++...+ .|...+-+++-+.+.+.+|.
T Consensus 29 ~~~~~~~~~~--~~~~~~DVI~L~iGeP-Df~tP~~i~~a~~~a~~-~~~~~y~~~---~G~~eLReaIa~~~~~~~gv~ 101 (411)
T PRK06290 29 KIKRAKQAAK--KKYPDMELIDMGVGEP-DEMADESVVEVLCEEAK-KPENRGYAD---NGIQELKEAAARYMEKVYGVK 101 (411)
T ss_pred HHHHHHHHHH--HHCCCCCEEECCCCCC-CCCCCHHHHHHHHHHHH-CCCCCCCCC---CCHHHHHHHHHHHHHHHCCCC
T ss_conf 9999999999--8687998777899899-99879999999999983-799888898---764999999999999971998
Q ss_pred ----CCEEEECCC-CHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC---CC----CHHHHHHHHHHHHH
Q ss_conf ----851674166-0245655666316897100454202677526664087640305---68----81478997643100
Q gi|254780486|r 91 ----EKMLYFGSG-YAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP---HN----NINSFAENINKWRK 158 (381)
Q Consensus 91 ----e~al~~~sG-~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~---Hn----D~~~Le~~l~~~~~ 158 (381)
++-+++.+| ..|-..++.+++.|||.|+.-.=.-.+-...+++.+++.+.++ .| |++++++.+.
T Consensus 102 ~~dp~~eIivt~Ga~~al~~~~~all~pGDeVli~~P~yp~Y~~~~~~~G~~~v~vp~~~e~~~~~d~~~l~~~i~---- 177 (411)
T PRK06290 102 DLDPVTEVIHSIGSKPALAYLPSCFINPGDVTLMTVPGYPVTATHTKWYGGEVYNLPLLEENNFLPDLDAIPKDVL---- 177 (411)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCC----
T ss_conf 7897767998988899999999996699998998688736589999984998999865666787659577198625----
Q ss_pred CCCCCCCEEEECCCCCCCCCH---HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCC
Q ss_conf 024786079714621576613---46899999863136089861311222347776401100001346521001346565
Q gi|254780486|r 159 SGGKGFPWIVVESIYSMDGDK---APLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALG 235 (381)
Q Consensus 159 ~~~~~~~~vv~egv~Sm~G~~---apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g 235 (381)
++.+.+|+.-.-.. +|.+ ..|++|+++|++||++++.||+|+--++...-.......+..+..|.++||||+|+
T Consensus 178 --~ktK~iilnsP~NP-TG~v~s~e~l~~i~~~a~~~~i~vIsDEiY~~l~yd~~~~s~~s~~~~~~~~I~i~S~SK~~~ 254 (411)
T PRK06290 178 --EKAKLLYLNYPNNP-TGAVATKEFYKEVVDFAFENDIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSFSKAYN 254 (411)
T ss_pred --CCCEEEEECCCCCC-CCEEECHHHHHHHHHHHHHCCCEEECHHHHHHHEECCCCCCCCCCCCCCCEEEEECCCCCCCC
T ss_conf --57659998899999-861424899999999986428776423535551008977761025677441799825774678
Q ss_pred CEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCE
Q ss_conf 302---67524510010000121100001357750257898878988627102247899999999876417978998972
Q gi|254780486|r 236 SSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIANKKIGFSSQSHI 312 (381)
Q Consensus 236 ~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~s~I 312 (381)
..| ||+++++++++.+... ..++.++. +.+...++.++|+.-+--.+.++..+++..+..+ .....|+....|-
T Consensus 255 mtGwRiG~~i~~~~li~~~~~i-~~~~~~~~-~~~~Q~aa~~aL~~~~~~~~~~~~y~~rrd~l~~-~L~~~G~~~~~P~ 331 (411)
T PRK06290 255 MTGWRLAFVAGNELIVKAFAAV-KDNTDSGQ-FIAIQKAGIYCLRHPEITEKTRAKYERRLDKMVK-ILKEVGFNAKMPG 331 (411)
T ss_pred CCEEEEEEEECCHHHHHHHHHH-HHHCCCCC-HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-HHHHCCCEECCCC
T ss_conf 7224589886699999999999-97464761-4999999999955989999999999999999999-9997798506887
Q ss_pred --EEEE--ECCH-------HHHHHHHHHHH-HCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf --8999--5897-------99999999999-7791898622888888870399962878999999999999999988738
Q gi|254780486|r 313 --QSIV--IGDN-------KSCLNIAKNLQ-KKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 313 --~~v~--~gd~-------~~a~~~~~~L~-~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
..++ +++. ....+++++|+ +.||.+.|.. .-| ..+||+.. ...++|++.++.|+++.+.+.
T Consensus 332 GafY~~~~ip~~~~~~~~~~~~~efa~~LLee~~VavvPG~----~fG-~yvRis~~--~~~e~leea~~rl~~~~~~l~ 404 (411)
T PRK06290 332 GTFYLYVKAPKGTKSGIKFANAEEFSQYLIKEKLISTVPWD----DAG-HFLRMSVT--FEAKSIEEEDRILNEVKRRLS 404 (411)
T ss_pred EEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCC----CCC-CEEEEEEE--CCHHHHHHHHHHHHHHHHHHH
T ss_conf 53699687877665777668999999999984899995655----153-55999983--889999999999999999872
No 135
>PRK09148 aminotransferase; Validated
Probab=99.91 E-value=5e-21 Score=151.19 Aligned_cols=347 Identities=15% Similarity=0.123 Sum_probs=203.3
Q ss_pred HHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 999999999759839992897689803446566779889999999999863786-8872244368858999999998401
Q gi|254780486|r 9 YEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPI-GSGGSRLLCGNYNQHLELEEEAADF 87 (381)
Q Consensus 9 ~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~-~~~~sr~~~G~~~~~~~lE~~lA~~ 87 (381)
+.++..++++ .|++++||+--+= .+...|.+++++.+++. +-.+ +.+.+ .|...+-+.+-+.+++-
T Consensus 19 ~~~~~~~~~~--------~G~~Vi~L~iG~P-d~~~P~~i~~a~~~a~~-~~~~~~Y~~~---~G~p~LReaia~~~~~r 85 (406)
T PRK09148 19 VNRAKAAARA--------AGADIIDLGMGNP-DLPTPQHIVDKLCETAG-KPRTHRYSAS---KGIPGLRRAQAAYYARR 85 (406)
T ss_pred HHHHHHHHHH--------CCCCEEECCCCCC-CCCCCHHHHHHHHHHHC-CCCCCCCCCC---CCCHHHHHHHHHHHHHH
T ss_conf 9999999986--------7998288989899-99978999999999974-9988878997---58599999999999998
Q ss_pred CCC---CC-EEEECCCC-HHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC----CCCHHHHHHHHHHHHH
Q ss_conf 288---85-16741660-245655666316897100454202677526664087640305----6881478997643100
Q gi|254780486|r 88 FGF---EK-MLYFGSGY-AANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP----HNNINSFAENINKWRK 158 (381)
Q Consensus 88 ~g~---e~-al~~~sG~-~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~----HnD~~~Le~~l~~~~~ 158 (381)
+|. ++ -+++.+|. .|-..++.++++|||.|++-.=.-.+-..++++.+++++.++ .+...++++.++...
T Consensus 86 ~g~~~~p~~~Iivt~Ga~~al~~~~~al~~pGD~Vli~~P~Yp~y~~~~~~~g~~~~~v~~~~~~~~~~~le~~~~~~~- 164 (406)
T PRK09148 86 FGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVVLCPNPSYPIHAFGFIMAGGVIRSVPAEPDEEFFPALERAVRHSI- 164 (406)
T ss_pred HCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHCC-
T ss_conf 5898898873998879899999999996699999998077658789999981791586057764333302999997458-
Q ss_pred CCCCCCCEEEECCCCCCCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCC-CCEEEEEHHCCCCCCCCCCCCCCC
Q ss_conf 0247860797146215766134---689999986313608986131122234777-640110000134652100134656
Q gi|254780486|r 159 SGGKGFPWIVVESIYSMDGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGPL-GKGLTHIIEERNNVIVMHSCSKAL 234 (381)
Q Consensus 159 ~~~~~~~~vv~egv~Sm~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~~-G~G~~~~~~~~~~~iv~~TlsKa~ 234 (381)
++.+.+|+.-.-.. .|.+. .|++|+++|++||++++.||+|+--++... -..+.+..+..+..|.++||||+|
T Consensus 165 --~ktk~iil~~P~NP-TG~v~~~~~l~~l~~~a~~~~i~visDEiY~~l~~~~~~~~s~~~~~~~~~~~I~~~s~SK~~ 241 (406)
T PRK09148 165 --PKPIALIVNYPSNP-TAYVADLDFYKDLVAFAKKHDIWILSDLAYSEIYFDGNPPPSVLQVPGAKDVTVEFTSMSKTF 241 (406)
T ss_pred --CCCEEEEECCCCCC-CCCCCCHHHHHHHHHHHHCCEEEEECCCCHHHHEECCCCCCCHHHCCCHHHHHHHHCCCCHHC
T ss_conf --76449997789998-887689999999998754054899634225351378876755431743032211111420303
Q ss_pred CCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHH-HHHHHCCCCCC--
Q ss_conf 5302---67524510010000121100001357750257898878988627-10224789999999-98764179789--
Q gi|254780486|r 235 GSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINIT-DKIANKKIGFS-- 307 (381)
Q Consensus 235 g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~-~~~~~~~~g~~-- 307 (381)
+..| ||+++++++++.+... ..++..++.+|.. .++.++|+--++. ++.++..+++.... +.+. ..|+.
T Consensus 242 ~m~G~RiG~~v~~~~li~~l~~~-~~~~~~~~~~~~Q-~aa~~aL~~~~~~~~~~~~~y~~rrd~l~~~L~--~~g~~~~ 317 (406)
T PRK09148 242 SMAGWRMGFAVGNERLIAALTRV-KSYLDYGAFTPIQ-VAATAALNGPQDCIAEMREVYKKRRDVLVESFG--RAGWDIP 317 (406)
T ss_pred CCCCCCEEEEECCHHHHHHHHHH-HHHCCCCCCHHHH-HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH--HCCCEEC
T ss_conf 67553359997599999999999-9764378878999-999999759678999999999999999999888--6697643
Q ss_pred CCCCEEEEE--ECC---HHHHHHHHHHHHHC-CEEEEEE-CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 989728999--589---79999999999977-9189862-2888888870399962878999999999999999988738
Q gi|254780486|r 308 SQSHIQSIV--IGD---NKSCLNIAKNLQKK-GFDIRAI-RPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 308 ~~s~I~~v~--~gd---~~~a~~~~~~L~~~-Gi~v~~i-~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
.+..-..++ +.+ .....++++.|+++ ||.+.|. .|- +.|...+||+... +++.+++.++.|++.+++.|
T Consensus 318 ~P~G~~y~w~~l~~~~~~~~~~~f~~~Ll~~~gV~v~PG~~Fg--~~g~~~iRlsfa~--~~~~L~eal~Rl~~~l~~~~ 393 (406)
T PRK09148 318 PPAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGVGFG--EHGEGYVRIALVE--NEQRIRQAARNIKRFLSSAD 393 (406)
T ss_pred CCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEECCHHHC--CCCCCEEEEEECC--CHHHHHHHHHHHHHHHHCCH
T ss_conf 7983699998886434789999999999973999998973218--8998859999738--89999999999999997608
No 136
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.91 E-value=7.3e-21 Score=150.18 Aligned_cols=334 Identities=13% Similarity=0.139 Sum_probs=196.5
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC---CCEEEECCC-CHH
Q ss_conf 8976898034465667798899999999998637868872244368858999999998401288---851674166-024
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF---EKMLYFGSG-YAA 102 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~---e~al~~~sG-~~A 102 (381)
.|+++++|+.-|= .|..-|.+++++.++++. --++.+.+ .|..++.+++-+.+.+.+|. ++-+++.+| -.+
T Consensus 29 ~G~dvi~l~~g~p-d~~~p~~i~~a~~~~~~~-~~~~Y~~~---~G~~~LR~aia~~~~~~~g~~v~~d~I~it~G~~~a 103 (389)
T PRK05764 29 AGRDVISLGAGEP-DFDTPEHIKEAAIAALDE-GKTKYTPA---AGIPELREAIAEKLKRDNGLDYEPDQIIVTTGAKQA 103 (389)
T ss_pred CCCCEEECCCCCC-CCCCCHHHHHHHHHHHHC-CCCCCCCC---CCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHH
T ss_conf 7998278889789-999889999999999847-99999899---887999999999999986899857978988887999
Q ss_pred HHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC-------CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
Q ss_conf 56556663168971004542026775266640876403056-------88147899764310002478607971462157
Q gi|254780486|r 103 NMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH-------NNINSFAENINKWRKSGGKGFPWIVVESIYSM 175 (381)
Q Consensus 103 n~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm 175 (381)
...++.+++++||.|++..=.-.+....+++.+++++.++- -|+++|++.+.. +.+.+++.-.-..
T Consensus 104 l~~~~~~l~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~vp~~~~~~~~~d~~~l~~~~~~------~~k~i~l~~P~NP- 176 (389)
T PRK05764 104 LYNAFMALLNPGDEVIIPAPYWVSYPEMVKLAGGKPVFVPTGEENGFKLTPEQLEAAITP------KTKALILNSPSNP- 176 (389)
T ss_pred HHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEECCCHHHCCCCCHHHHHHHCCC------CCEEEEECCCCCC-
T ss_conf 999999958999989985786245899999649865550436220876899999986384------6649998899899-
Q ss_pred CCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCC-CCEEEEE-HHCCCCCCCCCCCCCCCCCEE---EEEECCCCC
Q ss_conf 66134---689999986313608986131122234777-6401100-001346521001346565302---675245100
Q gi|254780486|r 176 DGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGPL-GKGLTHI-IEERNNVIVMHSCSKALGSSG---ALVGSNKII 247 (381)
Q Consensus 176 ~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~~-G~G~~~~-~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~i 247 (381)
.|.+. .+++|.++|++||++++.||+|+--+++.. -...... .+..+++|+++||||.|+..| ||+.+++++
T Consensus 177 tG~v~s~~~l~~l~~~a~~~~i~ii~DEiY~~l~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~~lpGlRiG~~i~~~~l 256 (389)
T PRK05764 177 TGAVYSKEELEAIADVAVEHDIWVLSDEIYEKLVYDGFEFTSIASLSPELFDRTITVNGFSKAYAMTGWRLGYAAGPKEL 256 (389)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHHCCHHHCCCEEECCCCCCCCCCCCCEEEEEECHHH
T ss_conf 88675779999999998863532751013435556898888877849012114314314430247866036999829999
Q ss_pred CCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCCCCCC---CCCC-EEEEEECCH-H
Q ss_conf 10000121100001357750257898878988627-1022478999999998764179789---9897-289995897-9
Q gi|254780486|r 248 YDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKKIGFS---SQSH-IQSIVIGDN-K 321 (381)
Q Consensus 248 i~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~~g~~---~~s~-I~~v~~gd~-~ 321 (381)
++.+... ..+.++. .+++.-.++.++++.-.+. ...++.++++............++. ++.. ...+-+... .
T Consensus 257 i~~~~~~-~~~~~~~-~~~~~Q~aa~~al~~~~~~~~~~~~~~~~rr~~l~~~l~~~~g~~~~~P~G~~~~~~~~~~~~~ 334 (389)
T PRK05764 257 IKAMSKL-QSQSTSN-PTSIAQYAAIAALTGPQDAVEEMRKAFEERRDLMVDGLNEIPGLECPKPEGAFYVFPNVSKGIT 334 (389)
T ss_pred HHHHHHH-HHHCCCC-CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCCEEEEEECCCCCC
T ss_conf 9999999-8541478-9869999999998597878999999999999999999984899886478810799588888899
Q ss_pred HHHHHHHHHH-HCCEEEEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 9999999999-7791898622-888888870399962878999999999999999988738
Q gi|254780486|r 322 SCLNIAKNLQ-KKGFDIRAIR-PPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 322 ~a~~~~~~L~-~~Gi~v~~i~-~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
...+++++|+ ++||.+.|.. |.. .+.+|++.. .++|++++.++.|.++++++.
T Consensus 335 ~~~~~~~~ll~~~gV~~~PG~~Fg~----~g~~Rl~fa--~~~e~l~ea~~RL~~~l~~lk 389 (389)
T PRK05764 335 DSEDFAEALLEEAGVAVVPGIAFGA----PGYVRLSYA--TSLEDIEEALERIERFLKSLK 389 (389)
T ss_pred CHHHHHHHHHHHCCEEEEECCCCCC----CCEEEEEEE--CCHHHHHHHHHHHHHHHHHCC
T ss_conf 9999999999819999980732489----984999983--889999999999999999758
No 137
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.91 E-value=6.7e-22 Score=156.67 Aligned_cols=350 Identities=14% Similarity=0.124 Sum_probs=207.8
Q ss_pred HHHHHHHHHHHCCCEEE---ECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 99999999997598399---928976898034465667798899999999998637868872244368858999999998
Q gi|254780486|r 8 FYEERLQKIKSKGRHRQ---LLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEA 84 (381)
Q Consensus 8 ~~~~~l~~~~~~g~~~~---~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~l 84 (381)
|+.+|++.++.+.-..+ ..+..++++|+--| -.|...|++++++.++++ .--++.+.+ .|...+.+++-+.+
T Consensus 5 ~~~~r~~~~~~s~i~~~~~~a~~~pDvI~l~~g~-pdf~~p~~i~~a~~~~~~-~~~~~Y~~~---~G~~~lR~aia~~~ 79 (383)
T PRK06348 5 FIAKKYQQNENNLMSDIATLAKKFPDIIDLSLGD-PDLITDESIIQAAFEDAK-KGHTRYTDS---TGDKELIEEIINYY 79 (383)
T ss_pred HHHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCC-CCCCCCHHHHHHHHHHHH-CCCCCCCCC---CCCHHHHHHHHHHH
T ss_conf 7888860189989999999983799928899968-899988999999999986-289988998---68999999999999
Q ss_pred HHHCCC----CCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC-------CCHHHHHHHH
Q ss_conf 401288----85167416602456556663168971004542026775266640876403056-------8814789976
Q gi|254780486|r 85 ADFFGF----EKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH-------NNINSFAENI 153 (381)
Q Consensus 85 A~~~g~----e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H-------nD~~~Le~~l 153 (381)
.+.+|. ++.++.+.+..|-..++.++++|||.|++..=........+++.+++.+.++- -|+++|++.+
T Consensus 80 ~~~~g~~~~~~~I~it~G~~~al~~~~~~l~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~i 159 (383)
T PRK06348 80 KKDYNLSFKENEIMAVVGACHGMYLALQSILDPGDEVIIHEPYFTPYKDQVEMVGGKPIIFETYEEDGFQINVDKLEALI 159 (383)
T ss_pred HHHHCCCCCHHHEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHCCCEEECCCCCCCCCCCCHHHHHHHC
T ss_conf 99878999767499948989999999999659999899806986026999998088625324456668657968989856
Q ss_pred HHHHHCCCCCCCEEEECCCCCCCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCC
Q ss_conf 431000247860797146215766134---68999998631360898613112223477764011000013465210013
Q gi|254780486|r 154 NKWRKSGGKGFPWIVVESIYSMDGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSC 230 (381)
Q Consensus 154 ~~~~~~~~~~~~~vv~egv~Sm~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~Tl 230 (381)
.. +.+.+++.-.=.. .|.+. .|++|.++|++||++++.||+|+--++++.-.......+..+++|+++||
T Consensus 160 ~~------~tk~iil~~P~NP-TG~v~~~e~l~~l~~la~~~~i~visDEiY~~l~~~~~~~p~~~~~~~~~~~I~~~S~ 232 (383)
T PRK06348 160 TS------KTKAIILNSPNNP-TGAVFSKETLEEIAKVAIENDLVIISDEVYDGFTFYEDFCPMASLAGMKERTITFGSF 232 (383)
T ss_pred CC------CCEEEEECCCCCC-CCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCCCHHHCCCCCCEEEEEECC
T ss_conf 87------8729998999798-8887777899999976530686998514334420389998832225666518999214
Q ss_pred CCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 46565302---67524510010000121100001357750257898878988627-102247899999999876417978
Q gi|254780486|r 231 SKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKKIGF 306 (381)
Q Consensus 231 sKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~~g~ 306 (381)
||.|+..| ||+++++.+++.++.......++ .|.+...++.++++.-++- +.+++.++++..+..+......++
T Consensus 233 SK~~~~~G~RiG~~i~p~~~~~~~~~~~~~~~~~--~~~~~q~aa~~al~~~~~~~~~~~~~~~~r~~~~~~~l~~~~~~ 310 (383)
T PRK06348 233 SKDFAMTGWRIGYVIAPDYIINTMKNINEGICFS--APTISQRAAIYALKHRDTIVPPIKEEFQKRMEYAYSRIESIPKL 310 (383)
T ss_pred HHHCCCCCCEEEEEEECHHHHHHHHHHHHHCCCC--CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 2311588860799982799999999997317666--87299999999985869999999999999999999999748995
Q ss_pred C---CCCC-EEEEEECC-HHHHHHHHHHHHH-CCEEEEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 9---9897-28999589-7999999999997-791898622-8888888703999628789999999999999999
Q gi|254780486|r 307 S---SQSH-IQSIVIGD-NKSCLNIAKNLQK-KGFDIRAIR-PPTVPINTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 307 ~---~~s~-I~~v~~gd-~~~a~~~~~~L~~-~Gi~v~~i~-~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
. .++. ..-+-+.. .....+++++|++ .||.+.|.. | -+.|...+|++.+ .+++++++.++.|+++
T Consensus 311 ~~~~p~G~~y~w~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F--g~~g~~~iRls~~--~~~~~l~ea~~Rl~k~ 382 (383)
T PRK06348 311 SLHPPKGSIYAFINIKKTGLSSVEFCEYLLKEAHVLVIPGKAF--GKSGEGYIRLACT--VGLEELEEAFNRIEKM 382 (383)
T ss_pred EECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCHHH--CCCCCCEEEEEEE--CCHHHHHHHHHHHHHC
T ss_conf 7617881679978899999899999999998689999785454--8899997999984--8999999999999741
No 138
>PRK08175 aminotransferase; Validated
Probab=99.91 E-value=8.4e-21 Score=149.81 Aligned_cols=351 Identities=15% Similarity=0.122 Sum_probs=201.7
Q ss_pred HHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHH
Q ss_conf 5789999999999759839992897689803446566779889999999999863786-887224436885899999999
Q gi|254780486|r 5 QMSFYEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPI-GSGGSRLLCGNYNQHLELEEE 83 (381)
Q Consensus 5 ~~~~~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~-~~~~sr~~~G~~~~~~~lE~~ 83 (381)
++.-+.++..+.++ .|+++++|+.-|= .+...|.+++++.+++. +-.+ +.+.+. |..++.+++-+.
T Consensus 13 ~~~~~~~~~~~~~~--------~G~dvi~l~iG~p-df~~p~~i~~a~~~~~~-~~~~~~Y~~~~---G~~~LReaia~~ 79 (395)
T PRK08175 13 VFNITAELKMAARR--------RGEDIIDFSMGNP-DGATPPHIVEKLCEVAQ-RPDTHGYSTSR---GIPRLRRAISRW 79 (395)
T ss_pred HHHHHHHHHHHHHH--------CCCCEEECCCCCC-CCCCCHHHHHHHHHHHC-CCCCCCCCCCC---CHHHHHHHHHHH
T ss_conf 89999999999985--------7998187769789-99879999999999976-99988889975---749999999999
Q ss_pred HHHHCCCC---C-EEEECCCC-HHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC---CCC-HHHHHHHHH
Q ss_conf 84012888---5-16741660-245655666316897100454202677526664087640305---688-147899764
Q gi|254780486|r 84 AADFFGFE---K-MLYFGSGY-AANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP---HNN-INSFAENIN 154 (381)
Q Consensus 84 lA~~~g~e---~-al~~~sG~-~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~---HnD-~~~Le~~l~ 154 (381)
+.+-+|.+ + -+++.+|. .|-..++.++.+|||.|++..=.=..-..++.+.+++++.++ .+| ..++++.++
T Consensus 80 ~~~~~g~~~~p~~~iivt~Ga~~al~~~~~al~~pGD~Vli~~P~Yp~y~~~~~~~g~~~~~vpl~~~~~~~~~le~~~~ 159 (395)
T PRK08175 80 YQDRYDVDIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIYGAVIAGAQVRSVPLVEGVDFFNELERAIR 159 (395)
T ss_pred HHHHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHH
T ss_conf 99986898787883998888799999999972799898997787740149999984784078504577760441999997
Q ss_pred HHHHCCCCCCCEEEECCCCCCCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCC-CCCEEEEEHHCCCCCCCCCCC
Q ss_conf 31000247860797146215766134---68999998631360898613112223477-764011000013465210013
Q gi|254780486|r 155 KWRKSGGKGFPWIVVESIYSMDGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGP-LGKGLTHIIEERNNVIVMHSC 230 (381)
Q Consensus 155 ~~~~~~~~~~~~vv~egv~Sm~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~-~G~G~~~~~~~~~~~iv~~Tl 230 (381)
+.. ++.+.+|+.-.=.. .|.+. .+++|.++|++||++++.||+|+--++.. .-..+....+..+..|.+.||
T Consensus 160 ~~~---~ktk~iiln~P~NP-TG~v~s~e~l~~i~~~a~~~~i~visDEiY~~l~~d~~~~~s~~~~~~~~~~~i~~~S~ 235 (395)
T PRK08175 160 ESY---PKPKMMILGFPSNP-TAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGWKAPSIMQVPGAKDVAVEFFTL 235 (395)
T ss_pred HCC---CCCEEEEECCCCCC-CCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCCCCHHHCCCCCCCEEEEEEC
T ss_conf 268---77459998899998-88757999999999988866948982353142102887786854474564654899503
Q ss_pred CCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 46565302---6752451001000012110000135775025789887898862-7102247899999999876417978
Q gi|254780486|r 231 SKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKR-KPALHKSLLQLINITDKIANKKIGF 306 (381)
Q Consensus 231 sKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~-~~~~~~~l~~~~~~~~~~~~~~~g~ 306 (381)
||+|+..| ||+++++++++.+... ..+......+|. ..++.++++--++ -.++++..+++..++.+.. ...|+
T Consensus 236 SK~f~~~G~RiG~ii~~~~~i~~~~~~-~~~~~~~~~~~~-Q~aa~~al~~~~~~~~~~~~~~~~rr~~l~~~L-~~~g~ 312 (395)
T PRK08175 236 SKSYNMAGWRIGFMVGNPELVSALARI-KSYHDYGTFTPL-QVAAIAALEGDQQCVRDIAEQYKRRRDVLVKGL-HEAGW 312 (395)
T ss_pred CCCCCCCCCCEEEEECCHHHHHHHHHH-HHHCCCCCCHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH-HHCCC
T ss_conf 223477754569996499999999999-987046876799-999999985989999999999999999999999-87598
Q ss_pred C---CC-CCEEEEEECC---HHHHHHHHHHHH-HCCEEEEEE-CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9---98-9728999589---799999999999-779189862-2888888870399962878999999999999999988
Q gi|254780486|r 307 S---SQ-SHIQSIVIGD---NKSCLNIAKNLQ-KKGFDIRAI-RPPTVPINTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 307 ~---~~-s~I~~v~~gd---~~~a~~~~~~L~-~~Gi~v~~i-~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
. ++ +-.+.+-+.+ .....+++++|+ +.||.+.|. .| -+.|...+|+++. .+++.+++.++.|+++++
T Consensus 313 ~~~~P~G~~y~w~~~~~~~~~~~~~ef~~~ll~e~~V~v~PG~~F--g~~g~~~vRl~~~--~~~~~l~eal~Ri~~~~~ 388 (395)
T PRK08175 313 MVEMPKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPGIGF--GDYGDTHVRFALI--ENRDRIRQAVRGIKAMFR 388 (395)
T ss_pred EEECCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCEEEECCHHH--CCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHH
T ss_conf 540689666996888887678998999999998498999777332--7799986999972--899999999999999998
Q ss_pred HH
Q ss_conf 73
Q gi|254780486|r 378 EG 379 (381)
Q Consensus 378 E~ 379 (381)
-.
T Consensus 389 a~ 390 (395)
T PRK08175 389 AD 390 (395)
T ss_pred HC
T ss_conf 67
No 139
>PRK07777 aminotransferase; Validated
Probab=99.91 E-value=4.4e-21 Score=151.56 Aligned_cols=332 Identities=13% Similarity=0.109 Sum_probs=194.0
Q ss_pred CCCCEEEECCCCCCCC---CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-----CEEEEC
Q ss_conf 2897689803446566---77988999999999986378688722443688589999999984012888-----516741
Q gi|254780486|r 26 LRRQDIWDFTSHDYLA---LSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE-----KMLYFG 97 (381)
Q Consensus 26 ~~~~~~l~f~s~dYLG---l~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e-----~al~~~ 97 (381)
..++++|||+. | +..-|.+++++.+++.. --++.+.+. |..++-+++-+.+.+.+|.+ +.++++
T Consensus 21 a~~~~~I~l~~----G~Pd~~~p~~i~~a~~~a~~~-~~~~Y~~~~---G~~~LReaia~~~~~~~g~~~~pe~eI~vt~ 92 (386)
T PRK07777 21 AVRTGAVNLGQ----GFPDEDGPPEMLEAAQEAIAG-GVNQYPPGP---GIAPLRAAIAAQRRRRYGLEYDPDTEVLVTV 92 (386)
T ss_pred HCCCCCEEECC----CCCCCCCCHHHHHHHHHHHHC-CCCCCCCCC---CHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
T ss_conf 57999889499----789985689999999999862-899779987---6499999999999998199999988099877
Q ss_pred CCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC----CC----CHHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 660245655666316897100454202677526664087640305----68----8147899764310002478607971
Q gi|254780486|r 98 SGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP----HN----NINSFAENINKWRKSGGKGFPWIVV 169 (381)
Q Consensus 98 sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~----Hn----D~~~Le~~l~~~~~~~~~~~~~vv~ 169 (381)
.+..|...++.+|++|||.|++..=...+-...+++.+++.+.++ .| |+++|++.+.. +.+.+++.
T Consensus 93 Ga~~al~~~~~~l~~pGD~Vlv~~P~y~~y~~~~~~~g~~~v~vpl~~~~~~~~~d~~~l~~~~~~------~tk~iil~ 166 (386)
T PRK07777 93 GATEAIAAAVLGLVEPGDEVLLIEPYYDSYAAVIAMAGAHRVAVPLVPDGRGFALDVDALRAAVTP------RTRALIVN 166 (386)
T ss_pred CHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCEEEECCCCCCCCCCCCCHHHHHHHCCC------CCEEEEEC
T ss_conf 879999999999648998776349977876999998389256134347788846696999974687------77699979
Q ss_pred CCCCCCCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCC-CCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEE
Q ss_conf 46215766134---68999998631360898613112223477-76401100001346521001346565302---6752
Q gi|254780486|r 170 ESIYSMDGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGP-LGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVG 242 (381)
Q Consensus 170 egv~Sm~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~-~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~ 242 (381)
..=.. .|.+. .+++|+++|++||++++.||+++.-++.. ....+...-+..+++|+++||||.|+..| ||++
T Consensus 167 ~P~NP-TG~v~s~e~l~~l~~la~~~~i~ii~DE~Y~~l~f~~~~~~~~~~~~~~~~~~i~i~S~SK~~~~~G~R~G~~v 245 (386)
T PRK07777 167 SPHNP-TGTVLSAAELAAIAELAVEHDLLVITDEVYEHLVFDGARHLPLATLPGMAERTVTISSAAKTFNVTGWKIGWAC 245 (386)
T ss_pred CCCCC-CCCCCCHHHHHHHHHHHHHCCCEEECCCCHHHHCCCCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEE
T ss_conf 99698-88488899999999998642978865753775226887777365467865760243166676677662259998
Q ss_pred CCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCCCCCC--CCCCEEEEE--E
Q ss_conf 4510010000121100001357750257898878988627-1022478999999998764179789--989728999--5
Q gi|254780486|r 243 SNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKKIGFS--SQSHIQSIV--I 317 (381)
Q Consensus 243 ~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~~g~~--~~s~I~~v~--~ 317 (381)
+++++++.++.. ..++...+.+|. ..++.+++..-+.. ...++.++++.....+ .....|+. .+..-..++ +
T Consensus 246 ~~~~li~~~~~~-~~~~~~~~~~~~-Q~a~~~al~~~~~~~~~~~~~~~~rrd~~~~-~L~~~g~~~~~p~G~~f~~~~~ 322 (386)
T PRK07777 246 GPAPLIAAVRAA-KQYLTYVGGAPF-QPAVAHALDHEDAWVAALRDSLQAKRDRLAA-GLAEAGFAVHDSAGTYFLCADP 322 (386)
T ss_pred ECHHHHHHHHHH-HHHCCCCCCHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-HHHHCCCEEECCCEEEEEEEEC
T ss_conf 589999999999-986367586589-9999999868759999999999999999999-9997698871798268998866
Q ss_pred CC--HHHHHHHHHHHHHC-CEEEEEEC-C-CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 89--79999999999977-91898622-8-88888870399962878999999999999999988
Q gi|254780486|r 318 GD--NKSCLNIAKNLQKK-GFDIRAIR-P-PTVPINTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 318 gd--~~~a~~~~~~L~~~-Gi~v~~i~-~-PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
.. .....+++++|+++ ||.+.|.. | +--+.+...+|++... ++|+|++.++.|+++++
T Consensus 323 ~~~~~~d~~~f~~~L~~~~gV~v~PG~~F~~~~~~g~~~vRlsf~~--~~e~l~ea~~RL~~~~r 385 (386)
T PRK07777 323 RPLGYDDGTAFCRALPERVGVAAIPMSAFCDPADAWNHLVRFAFCK--RDDTLDEAIRRLRALRR 385 (386)
T ss_pred CCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCEEEEEECC--CHHHHHHHHHHHHHHHC
T ss_conf 6689999999999999868999988744288987789979999689--99999999999999864
No 140
>PRK07367 consensus
Probab=99.90 E-value=1.2e-20 Score=148.85 Aligned_cols=346 Identities=13% Similarity=0.127 Sum_probs=203.7
Q ss_pred HHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 89999999999759839992897689803446566779889999999999863786887224436885899999999840
Q gi|254780486|r 7 SFYEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAAD 86 (381)
Q Consensus 7 ~~~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~ 86 (381)
.=+.++..++++ .|+++++|+.-|= .+...|.+++++.++++. --++.+.+ .|+.++.+++-+.+.+
T Consensus 14 ~~i~~~a~~~~~--------~G~dvi~l~~G~p-d~~~p~~i~~a~~~~~~~-~~~~Y~~~---~G~~~lR~aia~~~~~ 80 (385)
T PRK07367 14 LAIAAKAKAMKA--------EGLDVCSFSAGEP-DFDTPAHIKAAAKKALDE-GKTRYGPA---AGEPALREAIAHKLRR 80 (385)
T ss_pred HHHHHHHHHHHH--------CCCCCEECCCCCC-CCCCCHHHHHHHHHHHHC-CCCCCCCC---CCCHHHHHHHHHHHHH
T ss_conf 999999999997--------7998178989999-998789999999999865-88777999---9989999999999999
Q ss_pred HCCC----CCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC---C----CHHHHHHHHHH
Q ss_conf 1288----85167416602456556663168971004542026775266640876403056---8----81478997643
Q gi|254780486|r 87 FFGF----EKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH---N----NINSFAENINK 155 (381)
Q Consensus 87 ~~g~----e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H---n----D~~~Le~~l~~ 155 (381)
.+|. |..++.+.+-.|-..++.++++|||.|++..=...+-...+++.+++++.++- + |+++|++.+.
T Consensus 81 ~~g~~~~~d~I~it~G~~~al~~~~~~l~~pGD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~- 159 (385)
T PRK07367 81 ENGLDYQAENILVTNGGKQSLYNLMMALIDPGDEVIIPAPYWLSYPEMVKLAGGTPVIVPTDAATGFKITPEQLRQAIT- 159 (385)
T ss_pred HHCCCCCHHEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHCC-
T ss_conf 8589998504999089899999999997489998999069877719999980985799213621276779999997378-
Q ss_pred HHHCCCCCCCEEEECCCCCCCCCH---HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC-EEEEE-HHCCCCCCCCCCC
Q ss_conf 100024786079714621576613---468999998631360898613112223477764-01100-0013465210013
Q gi|254780486|r 156 WRKSGGKGFPWIVVESIYSMDGDK---APLDDLVKIANDYDGFIVVDEAHATGVCGPLGK-GLTHI-IEERNNVIVMHSC 230 (381)
Q Consensus 156 ~~~~~~~~~~~vv~egv~Sm~G~~---apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~-G~~~~-~~~~~~~iv~~Tl 230 (381)
++.+.+++.-.-.. .|.+ ..+++|+++|++||+++|.||+|+.-+++..-. .+... -+..+++|++.||
T Consensus 160 -----~~~k~~il~~P~NP-TG~v~s~~~l~~l~~~a~~~~~~iIsDEiY~~l~f~~~~~~s~~~~~~~~~~~~i~~~s~ 233 (385)
T PRK07367 160 -----PKTKLLVLNSPSNP-TGMVYTPEEIAALAEVIVEHDLYVVSDEIYEKILYDGAEHLSIGSLGPEIFQRTIISNGF 233 (385)
T ss_pred -----CCCEEEEECCCCCC-CCCCCCHHHHHHHHHHHHHCCEEEEECCCCHHHCCCCCCCCCHHHHCCCCCCCCHHHCCC
T ss_conf -----67749997899798-785665788889988887558699711321121058977778888594202464010010
Q ss_pred CCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 46565302---6752451001000012110000135775025789887898862-7102247899999999876417978
Q gi|254780486|r 231 SKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKR-KPALHKSLLQLINITDKIANKKIGF 306 (381)
Q Consensus 231 sKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~-~~~~~~~l~~~~~~~~~~~~~~~g~ 306 (381)
||.|+..| ||+++++++++.+.... .+..+ ..+.+...++.++++--+. -.++++.++++..+..+......++
T Consensus 234 SK~~~~~G~RiG~~~~~~~~i~~~~~~~-~~~~~-~~~~~~q~aa~~al~~~~~~~~~~~~~~~~rr~~l~~~l~~~~~~ 311 (385)
T PRK07367 234 AKAYSMTGWRVGYLAGPVELIKAASSIQ-SHSTS-NVCTFAQYGAIAALESPQDCVEEMRQAFAERRQLMLDGLNAIPGL 311 (385)
T ss_pred CCCCCCCCCEEEEEECCHHHHHHHHHHH-HHCCC-CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 0036776124887856899999999854-20555-457899999999995849899999999999999999999837996
Q ss_pred C--C-C-CCEEEEEECC-HHHHHHHHHHHHH-CCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9--9-8-9728999589-7999999999997-79189862288888887039996287899999999999999998873
Q gi|254780486|r 307 S--S-Q-SHIQSIVIGD-NKSCLNIAKNLQK-KGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 307 ~--~-~-s~I~~v~~gd-~~~a~~~~~~L~~-~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
. . + +..+.+-+.+ .....+++++|++ .||.+.|...= -....+|++.. .+++++++.++.|.++++.+
T Consensus 312 ~~~~P~G~~~~w~~l~~~~~~~~~~~~~ll~~~gV~v~PG~~F---g~~~~~Rl~~a--~~~~~l~ea~~RL~~~l~~l 385 (385)
T PRK07367 312 SCPKPEGAFYVFVDISKTGLGSLEFCRQLLEEHHVAAIPGIAF---GADDHIRLSYA--TDLATIEKGLERLERFVRSL 385 (385)
T ss_pred EECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCCCC---CCCCEEEEEEE--CCHHHHHHHHHHHHHHHHHC
T ss_conf 7558884799978889989999999999999699999758746---99993999970--98999999999999999849
No 141
>PRK09276 aspartate aminotransferase; Provisional
Probab=99.90 E-value=4.5e-21 Score=151.47 Aligned_cols=331 Identities=15% Similarity=0.111 Sum_probs=189.7
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHHHHCCC----CCEEEECCCC-
Q ss_conf 897689803446566779889999999999863786-8872244368858999999998401288----8516741660-
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPI-GSGGSRLLCGNYNQHLELEEEAADFFGF----EKMLYFGSGY- 100 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~-~~~~sr~~~G~~~~~~~lE~~lA~~~g~----e~al~~~sG~- 100 (381)
.|+++++|+..|- .+...|.+++|+.+++. .-++ +.+.+. |..++.+++-+.+.+.+|. |.-++..+|.
T Consensus 29 ~G~dvi~l~~G~p-d~~~p~~i~~al~~a~~-~~~~~~Y~~~~---G~~~LReaia~~~~~~~g~~~~p~~~vv~t~Ga~ 103 (385)
T PRK09276 29 RGVDVISLGIGDP-DMPTPKHIVEAMKKAAE-DPANHQYPSYE---GMLEFRKAVADWYKRRFGVELDPETEVISLIGSK 103 (385)
T ss_pred CCCCEEECCCCCC-CCCCCHHHHHHHHHHHH-CCCCCCCCCCC---CHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCH
T ss_conf 7998188979989-99989999999999980-87776659972---7199999999999998298768677699878844
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC---C----CHHHHHHHHHHHHHCCCCCCCEEEECCCC
Q ss_conf 2456556663168971004542026775266640876403056---8----81478997643100024786079714621
Q gi|254780486|r 101 AANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH---N----NINSFAENINKWRKSGGKGFPWIVVESIY 173 (381)
Q Consensus 101 ~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H---n----D~~~Le~~l~~~~~~~~~~~~~vv~egv~ 173 (381)
.|...++.+++++||.|++..=.-......+++.+++++.++- | |++++++.+.+ +.+.+++.-.=.
T Consensus 104 ~al~~~~~~l~~pGD~Vli~~P~Y~~y~~~~~~~g~~~v~vp~~~~~~~~~d~~~l~~~~~~------~~k~iil~~P~N 177 (385)
T PRK09276 104 EGIAHIPLAFVNPGDYVLVPDPGYPVYAIGTIFAGGEPYFMPLKEENGFLPDLDAIPEDVAR------KAKLMFINYPNN 177 (385)
T ss_pred HHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHHCC------CCEEEEECCCCC
T ss_conf 99999999973999989988886620599999869978506866667985799999975101------672999899989
Q ss_pred CCCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCC-CCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCC
Q ss_conf 5766134---68999998631360898613112223477-76401100001346521001346565302---67524510
Q gi|254780486|r 174 SMDGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGP-LGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKI 246 (381)
Q Consensus 174 Sm~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~-~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ 246 (381)
=.|.+- .+++|.++|++||++++.||+|+.-++.. .-.......+..+..|.++||||.|+..| ||++++++
T Consensus 178 -PTG~v~s~~~l~~l~~la~~~~i~ii~DEiY~~l~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RvG~~~~~~~ 256 (385)
T PRK09276 178 -PTGAVADLEFFEKVVDFAKKYDIIVCHDNAYSEIAYDGYKPPSFLEVPGAKDVGIEFHSLSKTYNMTGWRIGFAVGNAD 256 (385)
T ss_pred -CCCCHHHHHHHHHHHHHHCCCCCEEEEHHHHHHHCCCCCCCCCHHHCCCCCCCCCEECCCCCCCCCCCCEEEEEECCHH
T ss_conf -8551111889999987632557569754442221038888877655345424430304654556887620799975999
Q ss_pred CCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHCCCCCC---CC-CCEEEEEECCHH
Q ss_conf 01000012110000135775025789887898862-71022478999999998764179789---98-972899958979
Q gi|254780486|r 247 IYDYLINYAKPFIYTTSPSPILAVVACEALKLIKR-KPALHKSLLQLINITDKIANKKIGFS---SQ-SHIQSIVIGDNK 321 (381)
Q Consensus 247 ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~-~~~~~~~l~~~~~~~~~~~~~~~g~~---~~-s~I~~v~~gd~~ 321 (381)
+++.+... ..++.++. +.+...++.++++.-++ -.+.++.++++..++.+. ....|+. ++ +-.+.+-+++..
T Consensus 257 ~~~~l~~~-~~~~~~~~-~~~~q~a~~~al~~~~~~~~~~~~~~~~rr~~~~~~-L~~~g~~~~~p~gg~~~w~~l~~~~ 333 (385)
T PRK09276 257 LIAGLGKV-KSNVDSGV-FQAIQEAAIAALNGPQDVVEELRAIYQERRDILVEG-LNSLGWEVEKPKATFYVWAPVPKGY 333 (385)
T ss_pred HHHHHHHH-HHHCCCCC-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-HHHCCCEEECCCEEEEEEEECCCCC
T ss_conf 99999999-97655771-099999999998486999999999989999999999-9876986626885779978899998
Q ss_pred HHHHHHHHHHHC-CEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 999999999977-918986228888888703999628789999999999999999
Q gi|254780486|r 322 SCLNIAKNLQKK-GFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 322 ~a~~~~~~L~~~-Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
...+++++|+++ ||.+.|...= -+.+...+||+.. .++|+|++.++.|+++
T Consensus 334 ~~~~~~~~ll~~~gV~v~PG~~F-g~~g~~~iRl~~a--~~~e~l~eal~Rl~kl 385 (385)
T PRK09276 334 TSAEFATLLLDKAGIVVTPGNGF-GTAGEGYFRIALT--VPDERIEEAVERIKKL 385 (385)
T ss_pred CHHHHHHHHHHHCCEEEECCHHH-CCCCCCEEEEEEE--CCHHHHHHHHHHHHCC
T ss_conf 98999999998199999887421-8899886999975--9999999999998429
No 142
>PRK05794 consensus
Probab=99.90 E-value=1.5e-20 Score=148.18 Aligned_cols=342 Identities=14% Similarity=0.176 Sum_probs=197.7
Q ss_pred HHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 99999999975983999289768980344656677988999999999986378688722443688589999999984012
Q gi|254780486|r 9 YEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF 88 (381)
Q Consensus 9 ~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~ 88 (381)
+.++-++++++ |+++++|+--| -.+..-|.+++++.++++. --++.+.+ .|..++.+++-+.+.+.+
T Consensus 18 i~~~a~~~~~~--------G~dvi~l~iG~-pd~~~p~~i~~a~~~~~~~-~~~~Y~~~---~G~~~lReaia~~~~~~~ 84 (397)
T PRK05794 18 ITAKAKKMKAE--------GIDVIGFGAGE-PDFNTPENIKEAAIDAIEE-GYTKYTPA---SGILELKQAICDKFKKDN 84 (397)
T ss_pred HHHHHHHHHHC--------CCCEEECCCCC-CCCCCCHHHHHHHHHHHHC-CCCCCCCC---CCCHHHHHHHHHHHHHHH
T ss_conf 99999999977--------99827898979-9999789999999999855-89989899---772999999999999985
Q ss_pred CC----CCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC-------CCHHHHHHHHHHHH
Q ss_conf 88----85167416602456556663168971004542026775266640876403056-------88147899764310
Q gi|254780486|r 89 GF----EKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH-------NNINSFAENINKWR 157 (381)
Q Consensus 89 g~----e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H-------nD~~~Le~~l~~~~ 157 (381)
|. |..++++.+..|-..++.++++|||.|++..=.-.+-...+++.+++.+.++- -|+++|++.+..
T Consensus 85 g~~v~~~~I~it~G~~~al~~~~~~l~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~~~~-- 162 (397)
T PRK05794 85 GLNYEPSNIIVSNGAKQSLSNAFEAILNPGDEVIIPVPYWVSYPELVKLADGVPVFVDTKEENDFKYTIEELENAITS-- 162 (397)
T ss_pred CCCCCHHEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHHHCCC--
T ss_conf 899980018987885999999999966998989982687643499999718802996567323777799999975333--
Q ss_pred HCCCCCCCEEEECCCCCCCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC-EEEEEH-HCCCCCCCCCCCCC
Q ss_conf 00247860797146215766134---68999998631360898613112223477764-011000-01346521001346
Q gi|254780486|r 158 KSGGKGFPWIVVESIYSMDGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGPLGK-GLTHII-EERNNVIVMHSCSK 232 (381)
Q Consensus 158 ~~~~~~~~~vv~egv~Sm~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~-G~~~~~-~~~~~~iv~~TlsK 232 (381)
+.+.+++.-.=.. .|.+. .+++|.++|++||++++.||+|+.-+++..-. .+.... +..+++|++.||||
T Consensus 163 ----~~k~iil~~P~NP-tG~v~s~~~l~~l~~la~~~~i~visDEiY~~l~~~~~~~~s~~~~~~~~~~~~i~~~S~SK 237 (397)
T PRK05794 163 ----KTKAIIINSPNNP-TGTVYSKEELEEIAKFAKEHDLFIISDEIYEKLIYGEEEHISIASLSEDAFKRTVVINGMSK 237 (397)
T ss_pred ----CCCEEEECCCCCC-CCCCCCCHHHHHHHHHHHHCEEEEECHHHHHHHHCCCCCCCCHHHHCHHHHCCCEECCCCCC
T ss_conf ----5718997899898-78243506799999765410368843334577625898887889956143203320267644
Q ss_pred CCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH----HHHHHHHHHHHHHHHHCCCC
Q ss_conf 565302---67524510010000121100001357750257898878988627102----24789999999987641797
Q gi|254780486|r 233 ALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL----HKSLLQLINITDKIANKKIG 305 (381)
Q Consensus 233 a~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~----~~~l~~~~~~~~~~~~~~~g 305 (381)
.|+..| ||+++++++++.+... ..+..+ ..+++...++.++++ ..++. ++.++++..+..+......+
T Consensus 238 ~~~~~G~RvG~~~~~~~~~~~~~~~-~~~~~~-~~~~~~q~a~~~al~---~~~~~~~~~~~~~~~rr~~l~~~l~~~~g 312 (397)
T PRK05794 238 AYAMTGWRIGYAASSLEIIKVMSNI-QSHTTS-NPNSIAQYASLEALN---GDQEQIKNMVEEFKKRRDYMVERINSIKG 312 (397)
T ss_pred CCCCCCCEEEEEECCHHHHHHHHHH-HHHCCC-CCCHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 4477652258775589999999999-986668-976999999999985---87999999999999999999999860799
Q ss_pred CC--CCCCEEEEEE--CC----------HHHHHHHHHHHHH-CCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 89--9897289995--89----------7999999999997-79189862288888887039996287899999999999
Q gi|254780486|r 306 FS--SQSHIQSIVI--GD----------NKSCLNIAKNLQK-KGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFD 370 (381)
Q Consensus 306 ~~--~~s~I~~v~~--gd----------~~~a~~~~~~L~~-~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~ 370 (381)
+. .+..-..+++ .. .....+++++|++ .||.+.|...=-. ...+|++.. .+++++++.++
T Consensus 313 ~~~~~P~g~~y~~~~~~~~~~~~~~~~~~~~~~~f~~~ll~~~gV~v~PG~~Fg~---~~~vRl~f~--~~~e~l~eal~ 387 (397)
T PRK05794 313 LSCIKPKGAFYVMVNISKVIGKEIKGNTIKGSIDFANLLLEEENVAVVPGIAFGM---DNYIRLSYA--TSMENIEKGLD 387 (397)
T ss_pred CEEECCCEEEEEEEECHHHHCCCCCCCCCCCHHHHHHHHHHHCCEEEEECCCCCC---CCEEEEEEE--CCHHHHHHHHH
T ss_conf 6760688136995878344253346887789999999999849999981853589---983999982--99999999999
Q ss_pred HHHHHHHHHC
Q ss_conf 9999988738
Q gi|254780486|r 371 ILPQIISEGN 380 (381)
Q Consensus 371 ~l~~v~~E~~ 380 (381)
.|+++++++|
T Consensus 388 RL~~~l~~L~ 397 (397)
T PRK05794 388 RIENFLNKLD 397 (397)
T ss_pred HHHHHHHHCC
T ss_conf 9999998576
No 143
>PRK07778 consensus
Probab=99.90 E-value=4.4e-21 Score=151.56 Aligned_cols=343 Identities=11% Similarity=0.074 Sum_probs=198.5
Q ss_pred HHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-
Q ss_conf 9999999759839992897689803446566779889999999999863786887224436885899999999840128-
Q gi|254780486|r 11 ERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG- 89 (381)
Q Consensus 11 ~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g- 89 (381)
++..++++ .|++++||+--+= .+...+.+++++.++++ ...++.+.++ |..++.+++-+.+.+.+|
T Consensus 20 ~~a~~~~~--------~g~dvi~l~iG~P-d~~~P~~i~~a~~~a~~-~~~~~Y~~~~---G~p~LR~aia~~~~~~~g~ 86 (386)
T PRK07778 20 LAAAERQR--------THGDLVNLSAGQP-SAGAPEPVRAAAAAALH-RNQLGYTVAL---GIPELREAIAADYQRRHGI 86 (386)
T ss_pred HHHHHHHH--------CCCCEEECCCCCC-CCCCCHHHHHHHHHHHC-CCCCCCCCCC---CCHHHHHHHHHHHHHHHCC
T ss_conf 99999996--------6999078859899-99868999999999863-4999989997---8499999999999998689
Q ss_pred ---CCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC---CCHHHHHHHHHHHHHCCCCC
Q ss_conf ---885167416602456556663168971004542026775266640876403056---88147899764310002478
Q gi|254780486|r 90 ---FEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH---NNINSFAENINKWRKSGGKG 163 (381)
Q Consensus 90 ---~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H---nD~~~Le~~l~~~~~~~~~~ 163 (381)
.|..++.+.+..|...++.++++|||.|++..=.-.+....+++.+++.+.++- ++...-.+.+++. .++.
T Consensus 87 ~~~pe~I~vt~Ga~~al~~~~~~l~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~vp~~~~~~~~~~~~~l~~~---~~~~ 163 (386)
T PRK07778 87 TVEPDDVVVTTGSSGGFLLAFLACFDVGDRVAMASPGYPCYRNILSALGCEVVEIPCGPDTRFQPTAAMLAEL---DPPV 163 (386)
T ss_pred CCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHC---CCCC
T ss_conf 9885548981787999999999964999989986786510799999739825723677445667238898625---8664
Q ss_pred CCEEEECCCCCCCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE--
Q ss_conf 60797146215766134---6899999863136089861311222347776401100001346521001346565302--
Q gi|254780486|r 164 FPWIVVESIYSMDGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG-- 238 (381)
Q Consensus 164 ~~~vv~egv~Sm~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G-- 238 (381)
+.+++.-.-.. .|.+. .|++|.++|++||++++.||+|+.-++...-. ..-..+..++.|+++||||.|+..|
T Consensus 164 k~iil~~P~NP-TG~v~s~~~l~~l~~la~~~~i~iisDEiY~~l~~~~~~~-~~~~~~~~~~~i~i~S~SK~~~~~G~R 241 (386)
T PRK07778 164 RGVIVASPANP-TGTVIAPEELAAIASWCEASGVRLISDEVYHGLVYEGAPP-TSCAWETSREAVVVNSFSKYYAMTGWR 241 (386)
T ss_pred EEEEECCCCCC-CCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCC-CCCCCCCCCCEEEEECCCCCCCCCCCE
T ss_conf 39998999898-8778507999999999853787999434325311589998-643002478689993043112567760
Q ss_pred -EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHH--HHHHCCCHHHHHHHHHHHHHHHHHCCCCCC----CCCC
Q ss_conf -675245100100001211000013577502578988789--886271022478999999998764179789----9897
Q gi|254780486|r 239 -ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALK--LIKRKPALHKSLLQLINITDKIANKKIGFS----SQSH 311 (381)
Q Consensus 239 -G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~--~l~~~~~~~~~l~~~~~~~~~~~~~~~g~~----~~s~ 311 (381)
||+++++++++.+......+ +...|.+...++.+++. .....+..+++.+++.+.... .....++. .++.
T Consensus 242 iG~~~~p~~l~~~~~~~~~~~--~~~~~~~~Q~aa~~al~~~~~~~~~~~~~~~~~~r~~l~~-~L~~~g~~~~~p~~G~ 318 (386)
T PRK07778 242 LGWLLVPTELRRAVDRLTGNF--TICPPALSQYAAVAAFTPEATAEADGHLAHYAENRRLLLD-GLRALGITRLAPADGA 318 (386)
T ss_pred EEEEEECHHHHHHHHHHHHCC--CCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH-HHHHCCCCEECCCCEE
T ss_conf 699984899999999998507--6787789999999995601289999999999999999999-9997599541799847
Q ss_pred E-EEEEECC-HHHHHHHHHHHHH-CCEEEEEE-CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 2-8999589-7999999999997-79189862-2888888870399962878999999999999999988
Q gi|254780486|r 312 I-QSIVIGD-NKSCLNIAKNLQK-KGFDIRAI-RPPTVPINTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 312 I-~~v~~gd-~~~a~~~~~~L~~-~Gi~v~~i-~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
. ..+-+++ .....+++.+|++ .||.+.|. .|-. ..+...+||+... ++++|++.++.|+++++
T Consensus 319 fy~~~~~~~~~~d~~~f~~~Ll~~~gV~v~PG~~Fg~-~~g~~~vRlsf~~--~~~~l~eal~RL~~~l~ 385 (386)
T PRK07778 319 FYVYADVSHLTDDSLAFCSKLLADTGVAIAPGIDFDT-VRGNSFVRLSFAG--PTADIEEALRRIGSWLR 385 (386)
T ss_pred EEEEEECCCCCCCHHHHHHHHHHHCCEEEECCCCCCC-CCCCCEEEEEEEC--CHHHHHHHHHHHHHHHC
T ss_conf 8997889888999999999999839999975856688-9999969999839--89999999999999965
No 144
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.90 E-value=6.1e-21 Score=150.69 Aligned_cols=334 Identities=15% Similarity=0.129 Sum_probs=195.7
Q ss_pred CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC---CC-EEEECCC-C
Q ss_conf 28976898034465667798899999999998637868872244368858999999998401288---85-1674166-0
Q gi|254780486|r 26 LRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF---EK-MLYFGSG-Y 100 (381)
Q Consensus 26 ~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~---e~-al~~~sG-~ 100 (381)
-.|+++++|+.-+= .+...|.++++..++++.....+. + ..|..++.+++-+.+.+.+|. ++ -+++.+| .
T Consensus 29 ~~g~~vI~l~iG~P-d~~~p~~i~~a~~~~~~~~~~~~y--~--~~G~~eLReaia~~~~~~~g~~~~pd~~I~vt~G~~ 103 (399)
T PRK07681 29 AAGHKMIDLSIGNP-DMPPADFVREEMVHTANEKESYGY--T--LSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQ 103 (399)
T ss_pred HCCCCEEECCCCCC-CCCCCHHHHHHHHHHHHCCCCCCC--C--CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHH
T ss_conf 67998388989889-998789999999999718776888--9--887399999999999998689989888499868889
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC---CCCH-HHHHHHHHHHHHCCCCCCCEEEECCCCCCC
Q ss_conf 245655666316897100454202677526664087640305---6881-478997643100024786079714621576
Q gi|254780486|r 101 AANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP---HNNI-NSFAENINKWRKSGGKGFPWIVVESIYSMD 176 (381)
Q Consensus 101 ~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~---HnD~-~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~ 176 (381)
.|-..++.+++++||.|++..-.-.+....+++.+++.+.++ .|++ -|++.+.+... .+.+.+|+.-.=.. .
T Consensus 104 ~al~~~~~al~~pGD~Vli~~P~Y~~y~~~~~~~g~~~v~vpl~~e~~~~~d~~~l~~~i~---~~tk~iil~~P~NP-T 179 (399)
T PRK07681 104 DGLVHLPMVYANPGDIILVPDPGYTAYETGIQMAGATSYYMPLKKENDFLPDLELIPEEIA---DKAKMMILNFPGNP-V 179 (399)
T ss_pred HHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHCC---CCCEEEEECCCCCC-C
T ss_conf 9999999996799998997568744279999876998999505766674368999998532---25559997699898-8
Q ss_pred CCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCC-CCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCC
Q ss_conf 6134---6899999863136089861311222347-776401100001346521001346565302---67524510010
Q gi|254780486|r 177 GDKA---PLDDLVKIANDYDGFIVVDEAHATGVCG-PLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYD 249 (381)
Q Consensus 177 G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G-~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~ 249 (381)
|.+. .+++|.++|++||+++|.||+|+--++. +.-.......+..+..|++.||||.|+..| ||+++++++++
T Consensus 180 G~v~s~e~l~~l~~la~~~~i~iIsDEiY~~l~~~~~~~~s~~~~~~~~~~~I~i~S~SK~~~~~G~RiG~~i~~~~~i~ 259 (399)
T PRK07681 180 PAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPISFLSVPGAKEVGVEINSLSKSYSLAGSRIGYMIGNEEIVR 259 (399)
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEECCCCCCCEEECCCCCCCHHHCCCCCCCCCEECCCCCCCCCCCCCEEEEEECHHHHH
T ss_conf 87789999999999853136334312551110317988757644335413452532213455565321699970999999
Q ss_pred CCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCCCCCC----CCCCEEEEEECCHHHHH
Q ss_conf 000121100001357750257898878988627-1022478999999998764179789----98972899958979999
Q gi|254780486|r 250 YLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKKIGFS----SQSHIQSIVIGDNKSCL 324 (381)
Q Consensus 250 ~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~~g~~----~~s~I~~v~~gd~~~a~ 324 (381)
.+........+ +...| ...++.++++.-..- ...++..+++...+.+ .....|+. ..+..+.+.+.+.....
T Consensus 260 ~~~~~~~~~~~-~~~~~-~q~aa~~al~~~~~~~~~~r~~~~~rr~~l~~-~L~~~g~~~~~P~Gg~y~w~~l~~~~d~~ 336 (399)
T PRK07681 260 ALTQFKSNTDY-GVFLP-IQKAACAALRNGAAFCEKNREIYQERRDTLVD-GFRTFGWNVDKPAGSMFVWAEIPDGWTSL 336 (399)
T ss_pred HHHHHHHHCCC-CCCHH-HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-HHHHCCCEECCCCCEEEEEEECCCCCCHH
T ss_conf 99999986656-74539-99999999968747899999999999999999-99875986337880028968899999979
Q ss_pred HHHHHHHHC-CEEEEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 999999977-91898622-8888888703999628789999999999999999
Q gi|254780486|r 325 NIAKNLQKK-GFDIRAIR-PPTVPINTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 325 ~~~~~L~~~-Gi~v~~i~-~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
+++++|+++ ||.+.|.. | -|.|...+|++.. .++|++++.++.|++.
T Consensus 337 ~f~~~Ll~~~gV~v~PG~~F--g~~g~g~iRl~f~--~~~e~l~eal~RLk~a 385 (399)
T PRK07681 337 DFAYALMDRANVVVTPGHAF--GPHGEGFVRIALV--QDKEVLQQVVENIRNS 385 (399)
T ss_pred HHHHHHHHHCCEEEECCHHH--CCCCCCEEEEEEE--CCHHHHHHHHHHHHHC
T ss_conf 99999998299999886465--8999886999971--8899999999999888
No 145
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.90 E-value=6.1e-21 Score=150.70 Aligned_cols=335 Identities=15% Similarity=0.095 Sum_probs=193.3
Q ss_pred CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHHHHCCCC---C--EEEECCC
Q ss_conf 2897689803446566779889999999999863786-88722443688589999999984012888---5--1674166
Q gi|254780486|r 26 LRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPI-GSGGSRLLCGNYNQHLELEEEAADFFGFE---K--MLYFGSG 99 (381)
Q Consensus 26 ~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~-~~~~sr~~~G~~~~~~~lE~~lA~~~g~e---~--al~~~sG 99 (381)
-.|++++||+--+= .+...+.+++++.++++ .-++ +.+.+ .|..++-+++-+.+.+.+|.+ + .++++.+
T Consensus 32 ~~G~~vi~L~iG~P-d~~~P~~v~~a~~~al~-~~~~~~Y~~~---~G~~~LReaia~~~~~~~g~~~~p~~~v~vt~Ga 106 (394)
T PRK05942 32 EQGLDLIDLGMGNP-DGAAPQPVIEAAIAALE-DPQNHGYPPF---EGTASFRQAITDWYHRRYGVELDPDSEALPLLGS 106 (394)
T ss_pred HCCCCEEECCCCCC-CCCCCHHHHHHHHHHHH-CCCCCCCCCC---CCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCH
T ss_conf 65998188859899-99888999999999983-8888898997---6859999999999999868988988759988888
Q ss_pred CHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC---CC----CHHHHHHHHHHHHHCCCCCCCEEEECCC
Q ss_conf 0245655666316897100454202677526664087640305---68----8147899764310002478607971462
Q gi|254780486|r 100 YAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP---HN----NINSFAENINKWRKSGGKGFPWIVVESI 172 (381)
Q Consensus 100 ~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~---Hn----D~~~Le~~l~~~~~~~~~~~~~vv~egv 172 (381)
..|-..++.++++|||.|+...=.=.+...++.+.+++++.++ .+ |+++|++.+.+ +.+.+++.-.-
T Consensus 107 ~~al~~~~~al~~pGD~Vlv~~P~Yp~y~~~~~~~g~~~~~v~l~~~~~~~~d~~~l~~~i~~------~tk~iil~~P~ 180 (394)
T PRK05942 107 KEGLTHLALAYVNPGDVVLVPSPAYPAHFRGPLIAGAQIYPIILKPENDWLIDLSSIPEEVAQ------QAKILYFNYPS 180 (394)
T ss_pred HHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHHHC------CCCEEEEECCC
T ss_conf 999999999957998989978888676899999859989999705876887799999986112------67089993898
Q ss_pred CCCCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCC-CCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCC
Q ss_conf 15766134---68999998631360898613112223477-76401100001346521001346565302---6752451
Q gi|254780486|r 173 YSMDGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGP-LGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNK 245 (381)
Q Consensus 173 ~Sm~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~-~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~ 245 (381)
. =.|.+. .|.+|.++|++||+++|.||+|+--++.. .-..+.+..+..+..+.++||||.|+..| ||+++++
T Consensus 181 N-PTG~v~~~e~l~~i~~~a~~~~i~vIsDEiY~~l~~dg~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~ii~~~ 259 (394)
T PRK05942 181 N-PTTATAPREFFEEIVAFARKYEILLVHDLCYAELAFDGYQPTSLLEIPGAKDIGVEFHTLSKTYNMAGWRVGFVVGNR 259 (394)
T ss_pred C-CCCHHCCHHHHHHHHHHHHCCCCEEEECCCCCCEEECCCCCCCHHHCCCCCCCCEEECCCCCCCCCCCCCEEEEECCH
T ss_conf 8-101220199999999988517867970374100255687665576554653442166033345678774259986799
Q ss_pred CCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCCCCCC---CCCC-EEEEEECCH
Q ss_conf 0010000121100001357750257898878988627-1022478999999998764179789---9897-289995897
Q gi|254780486|r 246 IIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKKIGFS---SQSH-IQSIVIGDN 320 (381)
Q Consensus 246 ~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~~g~~---~~s~-I~~v~~gd~ 320 (381)
++++.++.......+ +.+.+...++.++++.-... .+.++.++++..+..+ ....+|+. +++. -+.+.++..
T Consensus 260 ~~i~~l~~~~~~~~~--~~~~~~q~aa~~al~~~~~~~~~~~~~~~~rrd~l~~-~L~~~g~~~~~p~g~~y~w~~~~~~ 336 (394)
T PRK05942 260 DIIQGLRTLKTNLDY--GIFSALQKAAETALQLPDSYLQQVQERYRQRRDFLIQ-GLGELGWDIPPTKATMYLWVPCPVG 336 (394)
T ss_pred HHHHHHHHHHHHCCC--CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-HHHHCCCEECCCCEEEEEEEECCCC
T ss_conf 999999999985345--7676999999999858477899999999999999999-8987696753788588998868999
Q ss_pred HHHHHHHHHHHH-CCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999999999997-7918986228888888703999628789999999999999999887
Q gi|254780486|r 321 KSCLNIAKNLQK-KGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 321 ~~a~~~~~~L~~-~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
....+++.+|++ .||.+.|...= -+.+...+||+... ++++|++.++.|++....
T Consensus 337 ~~~~~f~~~ll~~~gV~v~PG~~F-g~~g~~~iRlsf~~--~~~~l~ea~~Rl~~a~~r 392 (394)
T PRK05942 337 MGSTDFALNVLQKTGVVVTPGNAF-GEGGEGYVRISLIA--DCDRLGEALHRIKQAGIR 392 (394)
T ss_pred CCHHHHHHHHHHHCCEEEECCHHH-CCCCCCEEEEEEEC--CHHHHHHHHHHHHHHHHH
T ss_conf 798999999998499999887311-78999879999718--899999999999999985
No 146
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.90 E-value=6.6e-21 Score=150.45 Aligned_cols=333 Identities=15% Similarity=0.126 Sum_probs=198.8
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC----CCCEEEECCCCHH
Q ss_conf 897689803446566779889999999999863786887224436885899999999840128----8851674166024
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG----FEKMLYFGSGYAA 102 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g----~e~al~~~sG~~A 102 (381)
.++++|+|+--| -.|..-|.|++++.++++ .--++.+-+ .|..++.+++-+.+.+.+| .|..++.+.+..|
T Consensus 22 ~~~dvi~l~vgd-pDf~~p~~i~~a~~~~~~-~g~~~Y~~~---~G~~~lreaia~~~~~~~g~~v~~d~I~it~G~~~a 96 (382)
T PRK06108 22 GREDVLPFWFGE-SDLPTPDFIRDAAAAALA-DGETFYTHN---LGIPELREALARYVSRLHGATTPPERIAVTSSGVQA 96 (382)
T ss_pred CCCCCEECCCCC-CCCCCCHHHHHHHHHHHH-CCCCCCCCC---CCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHH
T ss_conf 899917888989-899988999999999984-799837999---886999999999999987889866849980789999
Q ss_pred HHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC---C-----CCHHHHHHHHHHHHHCCCCCCCEEEECCCCC
Q ss_conf 5655666316897100454202677526664087640305---6-----8814789976431000247860797146215
Q gi|254780486|r 103 NMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP---H-----NNINSFAENINKWRKSGGKGFPWIVVESIYS 174 (381)
Q Consensus 103 n~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~---H-----nD~~~Le~~l~~~~~~~~~~~~~vv~egv~S 174 (381)
-..++.++++|||.|++..=.-.+....+++.+++++.++ . -|+++||+.+.. +.+.+++.-.-.
T Consensus 97 l~~~~~~~~~pGD~Vlv~~P~Y~~~~~~~~~~g~~~~~vpl~~~~~~~~~d~~~le~~~~~------~~k~iil~~P~N- 169 (382)
T PRK06108 97 LMLAAQALVGPGDEVVAVTPAWPNLVAAPKILGARVVCVPLQYGGGGWQLDVDRLLAAITP------RTRALFINSPNN- 169 (382)
T ss_pred HHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCCCHHHHHHHCCC------CCEEEEECCCCC-
T ss_conf 9999999669999899816878656999997388278534566678866799999964575------664999889969-
Q ss_pred CCCCH---HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC--EEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCC
Q ss_conf 76613---468999998631360898613112223477764--01100001346521001346565302---67524510
Q gi|254780486|r 175 MDGDK---APLDDLVKIANDYDGFIVVDEAHATGVCGPLGK--GLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKI 246 (381)
Q Consensus 175 m~G~~---apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~--G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ 246 (381)
-.|.+ ..|.+|.++|++||++++.||+|+.-+++.... ......+..+++|.++||||.|+..| ||+.++++
T Consensus 170 PtG~v~s~e~l~~l~~la~~~~v~iisDEiY~~l~f~~~~~~ps~~~~~~~~~~~i~~~S~SK~f~~~G~RiG~ii~~~~ 249 (382)
T PRK06108 170 PTGWTASRDDQQAILAHCRRHGLWIVADEVYERLYYGGGGRAPSFLDIAEPDDRIIFVNSFSKNWAMTGWRLGWLVAPPS 249 (382)
T ss_pred CCCHHCCHHHHHHHHHHHHCCCCEEECHHHHHHHCCCCCCCCCHHHHHCCCCCEEEEEECCCHHCCCCCCEEEEEEECHH
T ss_conf 96620447889999998762697535334333301389988834665236676499980430310476761799997999
Q ss_pred CCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHCCCCCC---CCC-CEEEEEECCHH
Q ss_conf 01000012110000135775025789887898862-71022478999999998764179789---989-72899958979
Q gi|254780486|r 247 IYDYLINYAKPFIYTTSPSPILAVVACEALKLIKR-KPALHKSLLQLINITDKIANKKIGFS---SQS-HIQSIVIGDNK 321 (381)
Q Consensus 247 ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~-~~~~~~~l~~~~~~~~~~~~~~~g~~---~~s-~I~~v~~gd~~ 321 (381)
+++.+... ..+..+ ..|.+...++.++++..++ -.+.++.++++..++.+......++. .++ -.+.+-+.+..
T Consensus 250 ~~~~~~~~-~~~~~~-~~~~~~q~aa~~al~~~~~~~~~~~~~~~~~r~~l~~~l~~~~~~~~~~P~g~~y~w~~~~~~~ 327 (382)
T PRK06108 250 LGQDLEKL-IEYNTS-CVPQFVQRAAVAALDEGEDFVAQLVARLRRARDHLVDALRALPGVEVPKPDGAMYAFFRLDGAT 327 (382)
T ss_pred HHHHHHHH-HHHCCC-CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEEEECCCCC
T ss_conf 99999999-987037-7768999999999968626589999999999999999997379968737882799988799999
Q ss_pred HHHHHHHHHHH-CCEEEEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99999999997-791898622-888888870399962878999999999999999988
Q gi|254780486|r 322 SCLNIAKNLQK-KGFDIRAIR-PPTVPINTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 322 ~a~~~~~~L~~-~Gi~v~~i~-~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
...++++.|++ .||.+.|.. | -+.+...+|++.. .+++++++.++.|++.++
T Consensus 328 ~~~~~~~~ll~~~gV~v~PG~~F--g~~g~~~iRl~~a--~~~~~l~eal~RL~~~l~ 381 (382)
T PRK06108 328 DSLALAKRLVDEAGLGLAPGTAF--GPGGEGFLRWCFA--RDPARLDEGVERLRRFLA 381 (382)
T ss_pred CHHHHHHHHHHHCCEEEECCHHH--CCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHC
T ss_conf 99999999999699999878411--8899997999962--999999999999999966
No 147
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.90 E-value=1.2e-21 Score=155.05 Aligned_cols=303 Identities=16% Similarity=0.162 Sum_probs=176.6
Q ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CEEEECCCCHHHHHHHH
Q ss_conf 68980344656677988999999999986378688722443688589999999984012888-51674166024565566
Q gi|254780486|r 30 DIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE-KMLYFGSGYAANMAILS 108 (381)
Q Consensus 30 ~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e-~al~~~sG~~An~~~i~ 108 (381)
+.+|||||= +|-. -...+ .+|+- +.+.+|.+++|+++|.+ +-+++.+|..--+..+.
T Consensus 17 ~ilDfSsni------NP~~---~~~~l-~rYPd------------~~~~~Lr~~iA~~~~v~~~~I~vgnGs~ElI~~l~ 74 (332)
T PRK06425 17 RIIDFSANI------NDFM---DIGDI-SIYPE------------ISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLL 74 (332)
T ss_pred CCEEECCCC------CCCC---CCCHH-HHCCC------------CCHHHHHHHHHHHHCCCHHHEEECCCHHHHHHHHH
T ss_conf 988878877------9999---83156-42949------------98699999999886968673998220999999999
Q ss_pred HHCCCCCCCCHHHHCCHHHH-HHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH---HHH
Q ss_conf 63168971004542026775-26664087640305688147899764310002478607971462157661346---899
Q gi|254780486|r 109 TLPQATDLIVYDKLVHASIR-EGINSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP---LDD 184 (381)
Q Consensus 109 ~l~~~~d~ii~D~~~HaSi~-~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap---L~~ 184 (381)
...+++++++... -.|.+ ..++..+++++.++.+..+.....++.. +...+++.-.=. =+|.+.+ |.+
T Consensus 75 ~~~~~~~~~i~~P--tF~~Y~~~a~~~g~~~~~vp~~~~~~~~~~~~~~-----~~~lv~i~nPNN-PTG~~~~~~~l~~ 146 (332)
T PRK06425 75 SYINVGNIIIVEP--NFNEYKGYAFTHGIRISALPFNLINNNPEILNNY-----NFDLIFIVSPDN-PLGNLISRDSLLT 146 (332)
T ss_pred HHHCCCCEEEECC--CHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHCC-----CCCEEEEECCCC-CCCCCCCHHHHHH
T ss_conf 9868999899688--8899999999869989995743332588888458-----989899941817-2013489999999
Q ss_pred HHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECC
Q ss_conf 999863136089861311222347776401100001346521001346565302---67524510010000121100001
Q gi|254780486|r 185 LVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYT 261 (381)
Q Consensus 185 i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifs 261 (381)
+.+.|++.+.+++||||+.- +...............+++|++.||||+||..| ||+++++++++.++..-.|| +
T Consensus 147 l~~~~~~~~~~vvvDEAY~e-f~~~~~~~~~~l~~~~~NliVlRSfSK~~gLaGlRlGY~i~~~~~i~~l~~~~~p~--~ 223 (332)
T PRK06425 147 ISEICRKKGALLFIDEAFID-FVPNRAEEDVLLNRSYGNVIIGRSLTKILGIPSLRIGYIATDDYNMKISRKITEPW--S 223 (332)
T ss_pred HHHHCCCCCCEEEEECHHHH-HHCCCCHHHHHHHHCCCCEEEEEEHHHHHHCCCHHHEHHCCCHHHHHHHHHCCCCC--C
T ss_conf 99960526979999641356-51466343577764079889992007876164143333108999999999704898--7
Q ss_pred CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC----CCCCEEEEEECCHHHHHHHHHHHHHCCEEE
Q ss_conf 3577502578988789886271022478999999998764179789----989728999589799999999999779189
Q gi|254780486|r 262 TSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIANKKIGFS----SQSHIQSIVIGDNKSCLNIAKNLQKKGFDI 337 (381)
Q Consensus 262 t~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~~g~~----~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v 337 (381)
.+.+.. ++.++++.-.-.....+.+.+..+++.+ ....+|+. +.+..+-+.+++ +.++.++|+++||+|
T Consensus 224 --v~~~a~-~~~~a~~~~~~~~~~~~~~~~~r~~l~~-~L~~~g~~~~~~~~aNFil~~~~~---a~~l~~~L~~~gIlV 296 (332)
T PRK06425 224 --VCDPAI-DFIRSIDLDYVAKHSLDIMENERSYLIN-NLEAMGFRAAGDPSANFITFMIPD---AHDFYSYLLKNGILV 296 (332)
T ss_pred --CHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCEECCCCCCEEEEEECCC---HHHHHHHHHHCCEEE
T ss_conf --389999-9999963199999999999999999999-999777978899970489996799---999999999699199
Q ss_pred EEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8622-888888870399962878999999999999999988
Q gi|254780486|r 338 RAIR-PPTVPINTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 338 ~~i~-~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
+... || ..+...+||++. |++|.++++++|+++++
T Consensus 297 R~~~~~~--~l~~~~iRisvg---t~~eN~~ll~aLk~~Ls 332 (332)
T PRK06425 297 RLLDDYE--CLGEQYIRIAIR---RRSFNIKLVNALRNFLN 332 (332)
T ss_pred EECCCCC--CCCCCEEEEECC---CHHHHHHHHHHHHHHHC
T ss_conf 9889989--889999999789---99999999999999759
No 148
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.90 E-value=1.1e-21 Score=155.20 Aligned_cols=360 Identities=16% Similarity=0.189 Sum_probs=206.7
Q ss_pred CCCCHHHHHHHHHHHHHHCCCEEEE----CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHH
Q ss_conf 9886578999999999975983999----289768980344656677988999999999986378688722443688589
Q gi|254780486|r 1 MKNIQMSFYEERLQKIKSKGRHRQL----LRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQ 76 (381)
Q Consensus 1 m~~~~~~~~~~~l~~~~~~g~~~~~----~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~ 76 (381)
|...+=-|+-+|+..++.+.- |.+ .+.+++++|+.-+= .+...|.+++++.++++. --++.+-+ .|..++
T Consensus 1 ~~~~~~~~~a~r~~~~~~s~i-rel~~~~~~~~dvI~l~~G~p-d~~~p~~i~~a~~~~l~~-~~~~Y~~~---~G~~~L 74 (390)
T PRK08361 1 MYKKRKYFMAGRINLIQRSKI-RELFERASKMENVISLGIGEP-DFDTPKNIKEAAKRALDE-GWTHYTPN---AGIPEL 74 (390)
T ss_pred CCCCCCCHHHHHHHCCCCCHH-HHHHHHHHCCCCCEECCCCCC-CCCCCHHHHHHHHHHHHC-CCCCCCCC---CCCHHH
T ss_conf 985420499899724998879-999997737999389989989-998789999999999846-88888998---887999
Q ss_pred HHHHHHHHHHHCC----CCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC-------CC
Q ss_conf 9999999840128----885167416602456556663168971004542026775266640876403056-------88
Q gi|254780486|r 77 HLELEEEAADFFG----FEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH-------NN 145 (381)
Q Consensus 77 ~~~lE~~lA~~~g----~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H-------nD 145 (381)
.+++-+.+.+.+| .|..++.+.+-.|-..++.+++++||.|++..=.-.+....+++.+++++.++- -|
T Consensus 75 Reaia~~~~~~~g~~v~~d~I~vt~G~~~al~~~~~~l~~pGD~Vli~~P~Y~~y~~~~~~~g~~~~~vpl~~~~~~~~d 154 (390)
T PRK08361 75 REAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEQGDEVIIPDPAFVCYVEDAKIAEAKPIRIPLREENNFQPD 154 (390)
T ss_pred HHHHHHHHHHHHCCCCCHHEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCC
T ss_conf 99999999998788988232998778999999999996599998998476077799999982997999971587898779
Q ss_pred HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCC
Q ss_conf 14789976431000247860797146215766134---689999986313608986131122234777640110000134
Q gi|254780486|r 146 INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERN 222 (381)
Q Consensus 146 ~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~ 222 (381)
+++|++.+.. +.+.+|+.-.=.. .|.+. .+++|+++|++||++++.||+|+.-++... .-..-.....+
T Consensus 155 ~~~l~~~~~~------~~k~ivl~~P~NP-TG~v~s~e~l~~l~~la~~~~i~ii~DE~Y~~l~~~~~-~~~~~~~~~~~ 226 (390)
T PRK08361 155 PDELLEAITK------RTRMIVINYPNNP-TGAVLDKETAKAIADIAEDYNIYILSDEPYEHFLYEDA-KHYPMIKFAPD 226 (390)
T ss_pred HHHHHHHCCC------CCEEEEECCCCCC-CCCCCCHHHHHHHHHHHHHCCCEECCHHHHHHHHCCCC-CCCCHHHHCCC
T ss_conf 9999973654------6759998899897-57786678888999999863955347065687603887-54201131355
Q ss_pred CCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHH---CCCHHHHHHHHHHHH
Q ss_conf 6521001346565302---6752451001000012110000135775025789887898862---710224789999999
Q gi|254780486|r 223 NVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKR---KPALHKSLLQLINIT 296 (381)
Q Consensus 223 ~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~---~~~~~~~l~~~~~~~ 296 (381)
++|+++||||.|+..| ||+.+++++++.+... ..++..+..++ ...++.++++--.. -++.++.+.++..+.
T Consensus 227 ~~i~~~S~SK~~~~~G~RiG~~v~~~~~i~~~~~~-~~~~~~~~~~~-~q~a~~~al~~~~~~~~~~~~~~~~~~rr~~~ 304 (390)
T PRK08361 227 NTILANSFSKTFAMTGWRLGFVIAPTQVIREMIKL-HAYVIGNVASF-VQIAGIEALRSKESWKAVEEMRKEYNERRKLV 304 (390)
T ss_pred CEEEEECCHHHCCCCCCCEEEEEECHHHHHHHHHH-HHHCCCCCCHH-HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 28998025241478742379998389999999999-76602787689-99999999848504899999999999999999
Q ss_pred HHHHHCCCCCC---C-CCCEEEEEECC-HHHHHHHHHHHHHC-CEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 98764179789---9-89728999589-79999999999977-9189862288888887039996287899999999999
Q gi|254780486|r 297 DKIANKKIGFS---S-QSHIQSIVIGD-NKSCLNIAKNLQKK-GFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFD 370 (381)
Q Consensus 297 ~~~~~~~~g~~---~-~s~I~~v~~gd-~~~a~~~~~~L~~~-Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~ 370 (381)
.+......++. + .+..+-+-+.+ .....++++.|+++ ||.+.|...= -+.+...+|++.. .++++++..++
T Consensus 305 ~~~l~~~~g~~~~~P~gg~~lw~~l~~~~~~~~~~~~~ll~~~gV~v~PG~~F-g~~g~~~iRl~f~--~~~e~l~eal~ 381 (390)
T PRK08361 305 LKRLNKMPHITVFEPKGAFYVFPKIDETDMSSEDFSEWLLEKARVVVIPGTAF-GKMGEGYVRISYA--TSKEKLIEAME 381 (390)
T ss_pred HHHHHHCCCCEECCCCEEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCHHH-CCCCCCEEEEEEC--CCHHHHHHHHH
T ss_conf 99998589968668886669978888889899999999997199999887322-8899997999972--99999999999
Q ss_pred HHHHHHHHH
Q ss_conf 999998873
Q gi|254780486|r 371 ILPQIISEG 379 (381)
Q Consensus 371 ~l~~v~~E~ 379 (381)
.|+++++|+
T Consensus 382 Rl~~al~~L 390 (390)
T PRK08361 382 RMEKALSKL 390 (390)
T ss_pred HHHHHHHHC
T ss_conf 999999719
No 149
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.90 E-value=4.8e-21 Score=151.35 Aligned_cols=311 Identities=16% Similarity=0.184 Sum_probs=197.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCC--CCHHHHHHHHHHHHHCCCC--CEEEE-CCCCHHHHHHHHHHC---CCCC
Q ss_conf 98899999999998637868872244368--8589999999984012888--51674-166024565566631---6897
Q gi|254780486|r 44 SSTLLREKILSSLDSKIPIGSGGSRLLCG--NYNQHLELEEEAADFFGFE--KMLYF-GSGYAANMAILSTLP---QATD 115 (381)
Q Consensus 44 ~~p~v~~a~~~a~~~~~g~~~~~sr~~~G--~~~~~~~lE~~lA~~~g~e--~al~~-~sG~~An~~~i~~l~---~~~d 115 (381)
-.|+|+++..+.+.. +..+++.|--..| ..+..++.-+++|+++|.+ +-++| ++++.++-.++..+. +++|
T Consensus 11 ~~~~V~~~~~~~~~~-~~~np~~~~~~~~~~a~~~le~aR~~ia~~lg~~~~~eI~fts~aTea~n~~~~~l~~~~~~gd 89 (373)
T cd06453 11 KPQPVIDAIVDYYRH-YNANVHRGVHELSARATDAYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGD 89 (373)
T ss_pred CCHHHHHHHHHHHHH-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 999999999999997-5899873050999999999999999999974969989799918867998788653020269999
Q ss_pred CCCHHHHCCHHHHHHHH----HCCCCCEEECCC-----CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHH
Q ss_conf 10045420267752666----408764030568-----814789976431000247860797146215766134689999
Q gi|254780486|r 116 LIVYDKLVHASIREGIN----SGKAQAIAIPHN-----NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLV 186 (381)
Q Consensus 116 ~ii~D~~~HaSi~~g~~----ls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~ 186 (381)
.|+.-..-|.|.+...+ -.+.++...+.+ |+++|++.++. .+.+|.+-.|.+..|.+-|+++|.
T Consensus 90 ~Vi~s~~EH~s~~~p~~~la~~~G~~v~~ip~~~~G~i~~~~l~~~i~~-------~T~lV~~~~v~n~tG~~~pi~~I~ 162 (373)
T cd06453 90 EIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDDDGQLDLEALEKLLTE-------RTKLVAVTHVSNVLGTINPVKEIG 162 (373)
T ss_pred EEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCC-------CCEEEEEECCCCCCCCCCCHHHHH
T ss_conf 8997601112427899999870595898507897885889999975458-------956999978566776088799999
Q ss_pred HHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHC--CCCCCCCCCCCCCCCCEE-EEEECCCCCCCCCCCCC--------
Q ss_conf 9863136089861311222347776401100001--346521001346565302-67524510010000121--------
Q gi|254780486|r 187 KIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEE--RNNVIVMHSCSKALGSSG-ALVGSNKIIYDYLINYA-------- 255 (381)
Q Consensus 187 ~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~--~~~~iv~~TlsKa~g~~G-G~i~~~~~ii~~l~~~~-------- 255 (381)
++|+++|++++||-+|++|.+ .+++ .+-++++.+.-|-+|..| |++..++++.+.+.-..
T Consensus 163 ~~~~~~g~~~~vDa~Qa~g~~---------~idv~~~~~D~~~~s~hK~~GP~G~G~Lyv~~~~~~~l~p~~~gg~~~~~ 233 (373)
T cd06453 163 EIAHEAGVPVLVDGAQSAGHM---------PVDVQDLGCDFLAFSGHKMLGPTGIGVLYGKEELLEEMPPYGGGGEMIEE 233 (373)
T ss_pred HHHHHCCCEEEEECCCCCCCC---------CCCHHHHHCCEEEEECHHCCCCCCEEEEEECCHHHHCCCCCCCCCCCCCC
T ss_conf 999874976998762124554---------65177762773897610115888349999860145247833168875333
Q ss_pred ----------CCEEC-CCCCCCCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCCC------CCCCCEEEEE
Q ss_conf ----------10000-1357750257898878988627--102247899999999876417978------9989728999
Q gi|254780486|r 256 ----------KPFIY-TTSPSPILAVVACEALKLIKRK--PALHKSLLQLINITDKIANKKIGF------SSQSHIQSIV 316 (381)
Q Consensus 256 ----------~~~if-st~l~P~~~aaa~aal~~l~~~--~~~~~~l~~~~~~~~~~~~~~~g~------~~~s~I~~v~ 316 (381)
.+..| ++..+.+.+++..++++.+.+. +..+++..++.+++.+.....-++ +..++|+.+.
T Consensus 234 ~~~~~~~~~~~~~rfe~GT~n~~~i~~l~~al~~~~~~g~~~i~~~~~~L~~~l~~~L~~l~~v~i~~~~~~r~~ivsf~ 313 (373)
T cd06453 234 VSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAHEHELTAYALERLSEIPGVRVYGDAEDRAGVVSFN 313 (373)
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCEEEEE
T ss_conf 23432222555220255675588999999999999984899999999999999999996389976248845568889999
Q ss_pred ECCHHHHHHHHHHHHHCCEEEEEECC---CCC-CCC-CCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 58979999999999977918986228---888-888-703999628789999999999999
Q gi|254780486|r 317 IGDNKSCLNIAKNLQKKGFDIRAIRP---PTV-PIN-TARLRISITLNVDEPTIVKLFDIL 372 (381)
Q Consensus 317 ~gd~~~a~~~~~~L~~~Gi~v~~i~~---PtV-p~~-~~rlRi~v~a~~t~edi~~~~~~l 372 (381)
+.. .....+...|.++||.|+.... |.. ..+ .+.||++++..+|++|||+++++|
T Consensus 314 ~~~-~~~~~v~~~L~~~gI~vs~G~~Ca~~~~~~~g~~g~iRvS~~~ynt~~dId~li~al 373 (373)
T cd06453 314 LEG-IHPHDVATILDQYGIAVRAGHHCAQPLMRRLGVPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred ECC-CCHHHHHHHHHHCCEEEECCCCCCHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHC
T ss_conf 699-599999999967992997863324488997289987999688889999999999559
No 150
>PRK06056 consensus
Probab=99.90 E-value=1.7e-20 Score=147.97 Aligned_cols=343 Identities=11% Similarity=0.094 Sum_probs=194.6
Q ss_pred HHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 9999999997598399928976898034465667798899999999998637868-872244368858999999998401
Q gi|254780486|r 9 YEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIG-SGGSRLLCGNYNQHLELEEEAADF 87 (381)
Q Consensus 9 ~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~-~~~sr~~~G~~~~~~~lE~~lA~~ 87 (381)
+.++.+++++ .|+++++|+--+= .+...+.++++..+++. .-+++ .+.+ .|..++-+++-+.+.+-
T Consensus 22 i~~~a~~l~~--------~G~~vi~l~~G~P-d~~~p~~~~~a~~~a~~-~~~~~~Y~~~---~G~~eLR~aia~~~~~~ 88 (402)
T PRK06056 22 VDAKAKALKA--------AGRPVIGFGAGEP-DFPTPDHIVEAAVAACR-DPKNHRYTPA---AGLPELREAIAAKTLRD 88 (402)
T ss_pred HHHHHHHHHH--------CCCCCEECCCCCC-CCCCCHHHHHHHHHHHC-CCCCCCCCCC---CCHHHHHHHHHHHHHHH
T ss_conf 9999999997--------7998278889699-99988999999999975-9988857998---68199999999999998
Q ss_pred CC----CCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC----C---CCHHHHHHHHHHH
Q ss_conf 28----88516741660245655666316897100454202677526664087640305----6---8814789976431
Q gi|254780486|r 88 FG----FEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP----H---NNINSFAENINKW 156 (381)
Q Consensus 88 ~g----~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~----H---nD~~~Le~~l~~~ 156 (381)
+| .+..++.+.+-.|...++.++++|||.|++..=.-.+-...+++.+++.+.++ . -|+++||+.+.
T Consensus 89 ~g~~~~~d~I~iT~G~~~al~~~~~~l~~pGD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~le~~~~-- 166 (402)
T PRK06056 89 SGYEVSPSQVLVTNGGKQAVYEAFATLLDPGDEVILPAPYWTTYPEAIRLAGGVPVEVVAGADQGYLVTVEQLEAART-- 166 (402)
T ss_pred HCCCCCHHHEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHCCCCEEEECCCCCCCCCCCHHHHHHHCC--
T ss_conf 389988023798068149999999985799998998179875619999972897078223733377879999996366--
Q ss_pred HHCCCCCCCEEEECCCCCCCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCC-CCEEEEE-HHCCCCCCCCCCCC
Q ss_conf 000247860797146215766134---689999986313608986131122234777-6401100-00134652100134
Q gi|254780486|r 157 RKSGGKGFPWIVVESIYSMDGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGPL-GKGLTHI-IEERNNVIVMHSCS 231 (381)
Q Consensus 157 ~~~~~~~~~~vv~egv~Sm~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~~-G~G~~~~-~~~~~~~iv~~Tls 231 (381)
++.+.+++.-.-.. .|.+. .+++|.++|++||++++.||+|+.-++... -...... .+..+++|+++|||
T Consensus 167 ----~~tk~iil~~P~NP-tG~v~s~e~l~~l~~la~~~~i~ii~DEiY~~l~~~~~~~~s~~~~~p~~~~~~i~~~S~S 241 (402)
T PRK06056 167 ----ERTKVLLFVSPSNP-TGAVYSPEQVRAIGRWAAEHGIWVISDEIYEHLVYDGAVFTSIPAAVPELADRCIVVNGVA 241 (402)
T ss_pred ----CCCEEEEECCCCCC-CCCCCCHHHHHHHHHHHHHHCCCEECCHHHHHCCCCCCCCCCHHHHHHHHHCCCEEEECCC
T ss_conf ----68739998489798-8887427889999999997146155104432113589888888886545414644752011
Q ss_pred CCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 6565302---6752451001000012110000135775025789887898862-71022478999999998764179789
Q gi|254780486|r 232 KALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKR-KPALHKSLLQLINITDKIANKKIGFS 307 (381)
Q Consensus 232 Ka~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~-~~~~~~~l~~~~~~~~~~~~~~~g~~ 307 (381)
|.|+..| ||+++++++++.+... ..++.+ ..++....++.++++--.+ ..+.++.+.++.....+......++.
T Consensus 242 K~~~~~G~R~G~~v~~~~~i~~~~~~-~~~~~~-~~~~~~q~~a~~al~~~~~~~~~~~~~~~~rr~~~~~~L~~~~~~~ 319 (402)
T PRK06056 242 KTYAMTGWRVGWMIGPADVIKAATNL-QSHATS-NVSNVSQRAALAAVSGPLDAVAEMREAFDRRRRTIVRMLNAIPGVS 319 (402)
T ss_pred CCCCCCCCEEEEEEECHHHHHHHHHH-HHHCCC-CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 33557653079997089999999999-865457-7422999999999858899999998789999999999998679927
Q ss_pred ---CCCCEEEEEE--C----------CHHHHHHHHHHHHHC-CEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf ---9897289995--8----------979999999999977-91898622888888870399962878999999999999
Q gi|254780486|r 308 ---SQSHIQSIVI--G----------DNKSCLNIAKNLQKK-GFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDI 371 (381)
Q Consensus 308 ---~~s~I~~v~~--g----------d~~~a~~~~~~L~~~-Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~ 371 (381)
.+.. ..++. . .+....+++++|+++ ||.+.|...=. + ...+||+.. .++|+|++.++.
T Consensus 320 ~~~P~G~-~y~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~e~gV~v~PG~~Fg-~--~g~~Risfa--~~~e~l~eal~R 393 (402)
T PRK06056 320 CPTPDGA-FYAYPDVKALLGREIRGRRPQTSAELAALILEEAEVAVVPGEAFG-T--PGYLRLSYA--LGDDDLVEGVRR 393 (402)
T ss_pred ECCCCEE-EEEEEECHHHCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC-C--CCEEEEEEE--CCHHHHHHHHHH
T ss_conf 3588844-699775545336322589989999999999970989997484448-9--983999970--899999999999
Q ss_pred HHHHHHHH
Q ss_conf 99998873
Q gi|254780486|r 372 LPQIISEG 379 (381)
Q Consensus 372 l~~v~~E~ 379 (381)
|.++++|.
T Consensus 394 L~~~l~e~ 401 (402)
T PRK06056 394 LQELLSEA 401 (402)
T ss_pred HHHHHHHC
T ss_conf 99999956
No 151
>PRK08443 consensus
Probab=99.90 E-value=2.3e-20 Score=147.13 Aligned_cols=334 Identities=12% Similarity=0.128 Sum_probs=191.8
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC----CCEEEECCCCHH
Q ss_conf 8976898034465667798899999999998637868872244368858999999998401288----851674166024
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF----EKMLYFGSGYAA 102 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~----e~al~~~sG~~A 102 (381)
.|+++++|+..+= .+...|.+++++.++++. --++.+.+ .|..++.+++-+.+++.+|. |..++.+.+-.|
T Consensus 27 ~g~dvi~l~~G~p-d~~~p~~i~~a~~~a~~~-~~~~Y~~~---~G~~~lr~aia~~~~~~~g~~~~pe~I~it~G~~~a 101 (388)
T PRK08443 27 KGKDILSFSAGEP-DFDTPQAIKDAAIKAIEK-GFTKYTAV---AGIPELLKAIATKLKKDNNLDYETNEIITSNGAKHS 101 (388)
T ss_pred CCCCEEECCCCCC-CCCCCHHHHHHHHHHHHC-CCCCCCCC---CCCHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHH
T ss_conf 6998488989989-998799999999999855-99988999---887999999999999985899883129986887999
Q ss_pred HHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC-------CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
Q ss_conf 56556663168971004542026775266640876403056-------88147899764310002478607971462157
Q gi|254780486|r 103 NMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH-------NNINSFAENINKWRKSGGKGFPWIVVESIYSM 175 (381)
Q Consensus 103 n~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm 175 (381)
-..++.+++++||.|++..=.=..-...+++.+++.+.++- -|.++|++.+. ++.+.+++.-.=..
T Consensus 102 l~~~~~al~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~i~------~~~k~iil~~P~NP- 174 (388)
T PRK08443 102 LFNVFQALIEKGDEVIIPSPYWVTYPELVKYSGGVPVFIETDEENGFKITAEQLKKAIT------PKTKVLVLNTPSNP- 174 (388)
T ss_pred HHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCEEEEEEECCCCCCCCCHHHHHHHCC------CCCEEEEECCCCCC-
T ss_conf 99999998099998998268744239999980884799865543486779999997478------78739998689899-
Q ss_pred CCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEE-HHCCCCCCCCCCCCCCCCCEE---EEEECC-CCC
Q ss_conf 66134---6899999863136089861311222347776401100-001346521001346565302---675245-100
Q gi|254780486|r 176 DGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHI-IEERNNVIVMHSCSKALGSSG---ALVGSN-KII 247 (381)
Q Consensus 176 ~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~-~~~~~~~iv~~TlsKa~g~~G---G~i~~~-~~i 247 (381)
.|.+. .+++|+++|++||++++.||+|+.-+++..-...... .+..+++|+++||||+|+..| ||++++ +++
T Consensus 175 TG~v~s~~~l~~l~~~a~~~~~~ii~DE~Y~~l~~~~~~~~~~~~~~~~~~~~I~i~S~SK~~~~~G~RiG~~~~p~~~l 254 (388)
T PRK08443 175 TGSVYSKEELEAIAKVLKGTDIWVLSDEMYEKLVYDGEFVSVASVSEDMFKRTITINGLSKSVAMTGWRFGYMASKNKKL 254 (388)
T ss_pred CCCCCCHHHHHHHHHHHHCCCCEEECCHHHHHHCCCCCCCCHHHHHCCCCCCEEEECCCCHHCCCCCCCEEEEEECCHHH
T ss_conf 88476447899999986235756742201243226998788899722244678998034320058651469998186999
Q ss_pred CCCCCCCCCCEECCCCCCCCHHHHHHHHHHH-HHH-CCCHHHHHHHHHHHHHHHHHCCCCCC---CC-CCEEEEEECC-H
Q ss_conf 1000012110000135775025789887898-862-71022478999999998764179789---98-9728999589-7
Q gi|254780486|r 248 YDYLINYAKPFIYTTSPSPILAVVACEALKL-IKR-KPALHKSLLQLINITDKIANKKIGFS---SQ-SHIQSIVIGD-N 320 (381)
Q Consensus 248 i~~l~~~~~~~ifst~l~P~~~aaa~aal~~-l~~-~~~~~~~l~~~~~~~~~~~~~~~g~~---~~-s~I~~v~~gd-~ 320 (381)
++.++.. ..+..+ ..+.+...++.++++- ... -...++.+.++..+..+......++. ++ +....+.+.+ .
T Consensus 255 ~~~~~~~-~~~~~~-~~~~~~q~aa~~al~~~~~~~~~~~~~~~~~~r~~~~~~l~~~~g~~~~~P~g~~~~w~~~~~~~ 332 (388)
T PRK08443 255 IKAMKKL-QSQSTS-NINSITQKAAIPALNGECDKDIEKMRQAFEKRRDLAVDAINAIPGLSVYKPDGAFYLFVNIKKIE 332 (388)
T ss_pred HHHHHHH-HHHCCC-CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCEEEEEEEECCCCC
T ss_conf 9999999-744678-70179999999998545247899999999999999999987478967616883479978888889
Q ss_pred HHHHHHHHHHHH-CCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999997-79189862288888887039996287899999999999999998873
Q gi|254780486|r 321 KSCLNIAKNLQK-KGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 321 ~~a~~~~~~L~~-~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
....+++++|++ +||.+.|...-. ....+|+++. .++|.+++.++.|+++++..
T Consensus 333 ~d~~~f~~~ll~~~gV~v~PG~~Fg---~~g~vRl~~~--~~~e~l~ea~~RL~~~l~~~ 387 (388)
T PRK08443 333 KDSMKFCKKLLEQEGVAVVPGIGFG---MEGYFRLSFA--TSIESIKKGIERIANFVKSY 387 (388)
T ss_pred CCHHHHHHHHHHHCCEEEECCCCCC---CCCEEEEEEE--CCHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999981999997274358---8985999982--88999999999999999964
No 152
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.90 E-value=7.6e-22 Score=156.33 Aligned_cols=302 Identities=17% Similarity=0.162 Sum_probs=184.5
Q ss_pred CCCEEEECCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC--CEEEECCCCHHH
Q ss_conf 89768980344-656677988999999999986378688722443688589999999984012888--516741660245
Q gi|254780486|r 27 RRQDIWDFTSH-DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE--KMLYFGSGYAAN 103 (381)
Q Consensus 27 ~~~~~l~f~s~-dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e--~al~~~sG~~An 103 (381)
+..+.|||||| |=||.. .|.+. .++. ++|+-. ...|.+.+++++|.+ +-++...|...-
T Consensus 22 ~~~~ilDlSsNiNPlG~P-~~~~~---a~~~-~ryPd~-------------~~~l~~~~a~~~g~~~~~~Vl~gnGs~el 83 (339)
T PRK06959 22 PYDAWLDLSTGINPHGYP-VPPVP---ADAW-RRLPDD-------------GDGLAACAARYYGAPDAAHVLPVAGSQAA 83 (339)
T ss_pred CHHHEEECCCCCCCCCCC-CCHHH---HHHH-HHCCCC-------------CHHHHHHHHHHCCCCCHHHEEECCCHHHH
T ss_conf 998957616888989999-22224---9999-858998-------------58999999998199967709966579999
Q ss_pred HHHHHHHCCCCCCCCHHHHCCHHHH-HHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHH
Q ss_conf 6556663168971004542026775-266640876403056881478997643100024786079714621576613468
Q gi|254780486|r 104 MAILSTLPQATDLIVYDKLVHASIR-EGINSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPL 182 (381)
Q Consensus 104 ~~~i~~l~~~~d~ii~D~~~HaSi~-~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL 182 (381)
+.+++.+..++++++.-- . -|-+ ......+.++..+. . ....+. .....+++...-. =+|.+.|.
T Consensus 84 I~~l~~~l~~~~v~i~~p-t-fseY~~a~~~~G~~v~~~~---~--~~~~l~------~~~~~v~l~nPNN-PTG~~~~~ 149 (339)
T PRK06959 84 IRALPALLPRGRVGIAAL-A-YSEYAPAFARHGHRVVPLD---I--AADTLP------ATLTHAIVVNPNN-PTAERLPA 149 (339)
T ss_pred HHHHHHHHCCCCEEEECC-C-HHHHHHHHHHCCCEEEECC---C--CHHHCC------CCCCEEEEECCCC-CCCCCCCH
T ss_conf 999999828886899452-0-3677899998298555137---3--343373------5689899805807-10388899
Q ss_pred HHHH---HHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCC
Q ss_conf 9999---9863136089861311222347776401100001346521001346565302---675245100100001211
Q gi|254780486|r 183 DDLV---KIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAK 256 (381)
Q Consensus 183 ~~i~---~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~ 256 (381)
++|. +.+.+.+.+|+||||+.- +.+.- .+ ......|++|++.||||.||..| ||+++++++++.++....
T Consensus 150 ~~l~~~~~~~~~~~~~lvvDEAy~d--f~~~~-s~-~~~~~~~nlivlRS~sK~~gLaGlRlGy~~a~~~~i~~l~~~~~ 225 (339)
T PRK06959 150 ARLLRWHAQLAARGGTLIVDEAFAD--TGAHA-SL-AAHTHRPGLVVLRSVGKFFGLAGVRAGFVLAAPALLAALRDALG 225 (339)
T ss_pred HHHHHHHHHCCCCCCEEEEEHHHHH--HCCCH-HH-HHHCCCCCEEEEEECCHHHCCCCCCEEEEECCHHHHHHHHHHCC
T ss_conf 9999999855413888999734445--26654-55-76416999899841567645876463644379999999995389
Q ss_pred CEECCCCCCCCHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 00001357750257898878988627102---247899999999876417978998972899958979999999999977
Q gi|254780486|r 257 PFIYTTSPSPILAVVACEALKLIKRKPAL---HKSLLQLINITDKIANKKIGFSSQSHIQSIVIGDNKSCLNIAKNLQKK 333 (381)
Q Consensus 257 ~~ifst~l~P~~~aaa~aal~~l~~~~~~---~~~l~~~~~~~~~~~~~~~g~~~~s~I~~v~~gd~~~a~~~~~~L~~~ 333 (381)
+| +.+-+..+++.++|. +...+ ++++.+..+.+.. .....|++..+.-.++.+.. ..+..+.+.|.++
T Consensus 226 pw----~v~~~a~~a~~aal~---d~~~~~~~~~~l~~~r~~L~~-~L~~~g~~~~~~~lF~~~~~-~~a~~~~~~L~~~ 296 (339)
T PRK06959 226 AW----TVSGPARHAVRAAFA---DRAWQAAMRERLAADGARLAA-LLRAHGFAVHATPLFSWTDD-PRAAALHAALAAR 296 (339)
T ss_pred CC----CCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCCCEEEEEECC-CCHHHHHHHHHHC
T ss_conf 98----977999999999963---999999999999999999999-99977998667205898468-8999999999849
Q ss_pred CEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 918986228888888703999628789999999999999999887387
Q gi|254780486|r 334 GFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGNS 381 (381)
Q Consensus 334 Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~s 381 (381)
||+|+.+.+| ..|||+++. |++|.++++++|.+++.+++.
T Consensus 297 GIlVR~f~~p------~~LRi~vp~--~e~e~~RL~~AL~e~l~~~~~ 336 (339)
T PRK06959 297 GIWTRYFAAP------PSVRIGLPA--DEAEWQRLEDALAECVPTLAA 336 (339)
T ss_pred CEEEEECCCC------CCEEEECCC--CHHHHHHHHHHHHHHHHHHHH
T ss_conf 9299588999------988986789--999999999999999998664
No 153
>PRK07683 aminotransferase A; Validated
Probab=99.90 E-value=2.1e-20 Score=147.29 Aligned_cols=354 Identities=14% Similarity=0.146 Sum_probs=202.3
Q ss_pred HHHHHHHHHHCCCEEEE---CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 99999999975983999---289768980344656677988999999999986378688722443688589999999984
Q gi|254780486|r 9 YEERLQKIKSKGRHRQL---LRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAA 85 (381)
Q Consensus 9 ~~~~l~~~~~~g~~~~~---~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA 85 (381)
+..++..++...-.... .++.++|+|+--|= .|..-|.++++..++++. --++.+-+ .|..++.+++-+.+.
T Consensus 5 ~~~r~~~~~~s~ir~~~~~~~~~~dvI~l~ig~p-df~~p~~i~~a~~~~~~~-~~~~Y~~~---~G~~~lreaia~~~~ 79 (387)
T PRK07683 5 INPRVKDIQISGIRQFSNLVQNYDNLISLTIGQP-DFPTPSHVKEAAKRAIDE-NYTSYTHN---AGLLELRKAACNFVK 79 (387)
T ss_pred HHHHHHHCCCCHHHHHHHHHHCCCCEEECCCCCC-CCCCCHHHHHHHHHHHHC-CCCCCCCC---CCCHHHHHHHHHHHH
T ss_conf 8899851898889999999867999189999989-999789999999999857-99988999---887999999999999
Q ss_pred HHCCC----C-CEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC------CCHHHHHHHHH
Q ss_conf 01288----8-5167416602456556663168971004542026775266640876403056------88147899764
Q gi|254780486|r 86 DFFGF----E-KMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH------NNINSFAENIN 154 (381)
Q Consensus 86 ~~~g~----e-~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H------nD~~~Le~~l~ 154 (381)
+.+|. | +.++.+.+-.|-..++.++++|||.|+...=.-......+++.+++.+.++- -|.++|++.+.
T Consensus 80 ~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~pGD~Vlv~~P~Y~~~~~~~~~~g~~~v~v~~~~~~~~~d~~~le~~~~ 159 (387)
T PRK07683 80 DKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYEPIIRLCGATPVFIDTRETGFRLTAEALENAIT 159 (387)
T ss_pred HHHCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHCC
T ss_conf 98589989887599927829999999999769999899837876656999997087235368786788789999997355
Q ss_pred HHHHCCCCCCCEEEECCCCCCCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCC
Q ss_conf 31000247860797146215766134---689999986313608986131122234777640110000134652100134
Q gi|254780486|r 155 KWRKSGGKGFPWIVVESIYSMDGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCS 231 (381)
Q Consensus 155 ~~~~~~~~~~~~vv~egv~Sm~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~Tls 231 (381)
. +.+.+++...=.. .|.+. .+++|.++|++||++++.||+|+.-++.........+.+..+++|+++|||
T Consensus 160 ~------~~k~iil~~P~NP-tG~v~s~e~l~~i~~la~~~~i~ii~DEiY~~l~~~~~~~s~~~~~~~~~~~i~~~S~S 232 (387)
T PRK07683 160 E------KTRCVVLPYPSNP-TGVTLSKEELKDIANVLKDKNIFVLSDEIYSELVYDQPHTSIAHFPEMREKTIVINGLS 232 (387)
T ss_pred C------CCCEEEECCCCCC-CCCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHCCCCCCCHHHCCCCCCEEEEEECCC
T ss_conf 2------5757864799598-97887899999999976136944754651355406998776433445554036750441
Q ss_pred CCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHH-HHHHHCCCCC
Q ss_conf 6565302---67524510010000121100001357750257898878988627-10224789999999-9876417978
Q gi|254780486|r 232 KALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINIT-DKIANKKIGF 306 (381)
Q Consensus 232 Ka~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~-~~~~~~~~g~ 306 (381)
|+|+..| ||+.+++++++.+.... .+..+ ..++....++.+++.--.+. ..+++..+++..+. +.+...++.+
T Consensus 233 K~~~~~G~RiG~i~~~~~~~~~~~~~~-~~~~~-~~~~~~q~aa~~al~~~~~~~~~~~~~~~~r~~~~~~~L~~~g~~~ 310 (387)
T PRK07683 233 KSHSMTGWRIGFLFAPSYLAKHILKVH-QYNVT-CASSISQYAALEALTAGKDDAKMMRHQYKKRRDYVYNRLISMGLDV 310 (387)
T ss_pred CCCCCCCCCEEEEECCHHHHHHHHHHH-HHCCC-CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 013676522799975999999999999-75657-8868999999999976988999999999999999999998769955
Q ss_pred C-CCCC-EEEEEECC-HHHHHHHHHHHHH-CCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9-9897-28999589-7999999999997-79189862288888887039996287899999999999999998873
Q gi|254780486|r 307 S-SQSH-IQSIVIGD-NKSCLNIAKNLQK-KGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 307 ~-~~s~-I~~v~~gd-~~~a~~~~~~L~~-~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
. .++. .+.+-+++ .....+++.+|++ .||.+.|...= -+.+...+|++.. .+++++++.++.|+++++|-
T Consensus 311 ~~P~G~~~~w~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F-g~~g~g~~Rlsfa--~~~e~l~eal~Rl~~~l~~~ 384 (387)
T PRK07683 311 EKPTGAFYIFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAF-SEYGEGYVRLSYA--YSIETLKEGLDRLEAFLQKK 384 (387)
T ss_pred ECCCEEEEEEEECCCCCCCHHHHHHHHHHHCCEEEECCHHH-CCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHHHH
T ss_conf 67881279967878889997999999998399999878422-8899886999971--99999999999999999987
No 154
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.90 E-value=9.4e-21 Score=149.50 Aligned_cols=330 Identities=15% Similarity=0.137 Sum_probs=191.3
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHHHHCCCC---C-EEEECCCC-
Q ss_conf 897689803446566779889999999999863786-88722443688589999999984012888---5-16741660-
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPI-GSGGSRLLCGNYNQHLELEEEAADFFGFE---K-MLYFGSGY- 100 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~-~~~~sr~~~G~~~~~~~lE~~lA~~~g~e---~-al~~~sG~- 100 (381)
.|+++++|+..|- .|...|.+++|+.++++. -.. +.+.+ .|..++.+++-+.+.+.+|.+ + -++..+|.
T Consensus 27 ~G~dvi~l~ig~p-df~~p~~i~~a~~~a~~~-~~~~~Y~~~---~G~~~lreaia~~~~~~~g~~~~p~~~vi~t~Ga~ 101 (383)
T TIGR03540 27 EGVDVISLGIGDP-DLPTPKHIVEALCKAAEN-PENHRYPSY---EGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSK 101 (383)
T ss_pred CCCCEEECCCCCC-CCCCCHHHHHHHHHHHHC-CCCCCCCCC---CCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCH
T ss_conf 6998588889989-999899999999999828-887654998---78499999999999998689899676699847825
Q ss_pred HHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC---CC----CHHHHHHHHHHHHHCCCCCCCEEEECCCC
Q ss_conf 245655666316897100454202677526664087640305---68----81478997643100024786079714621
Q gi|254780486|r 101 AANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP---HN----NINSFAENINKWRKSGGKGFPWIVVESIY 173 (381)
Q Consensus 101 ~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~---Hn----D~~~Le~~l~~~~~~~~~~~~~vv~egv~ 173 (381)
.|-..++.+++++||.|++..=........+++.+++++.++ .| |+++|++.+. .+.+.+++.-.-.
T Consensus 102 ~al~~~~~~l~~pGD~Vli~~P~Y~~y~~~~~~~g~~~v~vpl~~~~~~~~d~e~l~~~~~------~~~k~iil~~P~N 175 (383)
T TIGR03540 102 EGIAHIPLAFVNPGDIVLVPDPGYPVYRIGTLFAGGEPYEMPLKEENGFLPDFDAIPEDIA------KKAKLMFINYPNN 175 (383)
T ss_pred HHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCC------CCCEEEEECCCCC
T ss_conf 9999999996689898998789860169999971985899613357798579999987452------3774999899989
Q ss_pred CCCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCC-CCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCC
Q ss_conf 5766134---689999986313608986131122234777-6401100001346521001346565302---67524510
Q gi|254780486|r 174 SMDGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGPL-GKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKI 246 (381)
Q Consensus 174 Sm~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~~-G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ 246 (381)
. .|.+. .|++|+++|++||++++.||+|+--++... -....+..+..+..|.++||||+|+..| ||++++++
T Consensus 176 P-TG~v~s~~~l~~i~~la~~~~i~iIsDEiY~~l~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~~~G~RiG~~i~~~~ 254 (383)
T TIGR03540 176 P-TGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYKAPSFLEVDGAKDVGIEFHSLSKTYNMTGWRIGMAVGNAD 254 (383)
T ss_pred C-CCCCCCCHHHHCCCCCCCCCCCEEECCHHHHHHCCCCCCCCCCEECCCCCCEEEEEEECCCCCCCCCCEEEEECCCHH
T ss_conf 7-070121022220100124554057611025553038999977111366554257763023544788734896228999
Q ss_pred CCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCCCCCC---CCC-CEEEEEECCHH
Q ss_conf 010000121100001357750257898878988627-1022478999999998764179789---989-72899958979
Q gi|254780486|r 247 IYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKKIGFS---SQS-HIQSIVIGDNK 321 (381)
Q Consensus 247 ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~~g~~---~~s-~I~~v~~gd~~ 321 (381)
+++.+... ..++.++..+| ...++.++++..++- .+.++.++++..+..+. ....++. +++ ..+-+-+.+..
T Consensus 255 l~~~~~~~-~~~~~~~~~~~-~q~a~~~al~~~~~~~~~~~~~~~~~r~~~~~~-L~~~g~~~~~p~g~~~~w~~~~~~~ 331 (383)
T TIGR03540 255 LIAGLGKV-KTNVDSGVFQA-IQYAAIAALNGPQDVVKEIRKIYQRRRDLLLEA-LKKIGIDVEKPKATFYVWVPVPEGY 331 (383)
T ss_pred HHHHHHHH-HHHHCCCCCHH-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-HHHCCCEEECCCCEEEEEEECCCCC
T ss_conf 99999999-75513567659-999999998591999999999999999999999-9876987735780579989899998
Q ss_pred HHHHHHHHHHH-CCEEEEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 99999999997-791898622-8888888703999628789999999999999999
Q gi|254780486|r 322 SCLNIAKNLQK-KGFDIRAIR-PPTVPINTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 322 ~a~~~~~~L~~-~Gi~v~~i~-~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
...+++++|++ .||.+.|.. |- +.+...+||+.. .++++|++.++.|+++
T Consensus 332 ~~~~~~~~ll~~~gV~v~PG~~Fg--~~g~~~iRl~~~--~~~e~l~eal~RL~kl 383 (383)
T TIGR03540 332 TSAEFAARLLEETGVVVTPGVGFG--EYGEGYIRISLT--VPDERLEEAVARIKKL 383 (383)
T ss_pred CHHHHHHHHHHHCCEEEECCHHHC--CCCCCEEEEEEE--CCHHHHHHHHHHHHCC
T ss_conf 989999999983999998885328--899886999986--9999999999998449
No 155
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.89 E-value=9.4e-21 Score=149.51 Aligned_cols=313 Identities=17% Similarity=0.263 Sum_probs=190.9
Q ss_pred CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CEEEECCCCHHHH
Q ss_conf 289768980344656677988999999999986378688722443688589999999984012888-5167416602456
Q gi|254780486|r 26 LRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE-KMLYFGSGYAANM 104 (381)
Q Consensus 26 ~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e-~al~~~sG~~An~ 104 (381)
.+++..+.+++|-= -+.-.|.+++++.+++. ...++ | + ....+.+|-++||+++|.+ +.+++.+|..--+
T Consensus 15 ~~~~~~I~L~~NEn-p~gpp~~v~~ai~~~l~-~~~~~----r--Y-Pd~~~~~Lr~~ia~~~gv~~~~v~~gnGs~e~i 85 (337)
T PRK03967 15 YEGDYRIWLDKNEN-PFDLPEELKEEIFEELK-RVPFN----R--Y-PHITADPLREAIAEFLGLDAENIIVGNGSDELI 85 (337)
T ss_pred CCCCCCEEEECCCC-CCCCCHHHHHHHHHHHH-HCCCC----C--C-CCCCHHHHHHHHHHHHCCCHHEEEECCCHHHHH
T ss_conf 89998178269899-99999999999999987-15877----6--9-999879999999998683841099827889999
Q ss_pred HHHHHHCCCCC-CCCHHHHCCHHHHHHHHHCCCCCEEECCC-CHH-HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH
Q ss_conf 55666316897-10045420267752666408764030568-814-7899764310002478607971462157661346
Q gi|254780486|r 105 AILSTLPQATD-LIVYDKLVHASIREGINSGKAQAIAIPHN-NIN-SFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP 181 (381)
Q Consensus 105 ~~i~~l~~~~d-~ii~D~~~HaSi~~g~~ls~a~~~~f~Hn-D~~-~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap 181 (381)
..+..+. ++| +++.+. .-..-...+++.+++++.++-. |.. +++..++.. .+.+.+++...=.. +|...+
T Consensus 86 ~~~~~~~-~gd~v~i~~P-~f~~Y~~~~~~~g~~~~~vpl~~~f~~d~~~~~~~~----~~~~~v~l~nPnNP-TG~~~~ 158 (337)
T PRK03967 86 SYLVKLF-NGKYIVISPP-TFGMYSFYAKLNGIPVIDVPLKEDFTIDGDRIVEKA----KDASAVFICSPNNP-TGNLQP 158 (337)
T ss_pred HHHHHHC-CCCEEEECCC-CCHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHCC----CCCCEEEEECCCCC-CCCCCC
T ss_conf 9999863-9997998689-830899999983985999615345678999998517----78878999389998-762167
Q ss_pred HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCE
Q ss_conf 899999863136089861311222347776401100001346521001346565302---67524510010000121100
Q gi|254780486|r 182 LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPF 258 (381)
Q Consensus 182 L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ 258 (381)
.+++.++.+. +..+++|||+.- +.+ ..........+++|++.||||+||..| ||+++++++++.++....+|
T Consensus 159 ~~el~~~~~~-~~~vvvDEaY~e-f~~---~s~~~l~~~~~nliv~rSfSK~~glaGlRlGy~ia~~~~i~~l~k~~~p~ 233 (337)
T PRK03967 159 IEEILKVLDT-GKPVVVDEAYVE-FSG---KSYIGLLDEYDNLILLRTFSKAFGLAGIRVGYAIANEEIIKALYRIKPPF 233 (337)
T ss_pred HHHHHHHHHC-CCEEEECCCHHH-HCC---CCHHHHHHHCCCCEEEECCCHHHCCCCCCCEEECCCHHHHHHHHHHCCCC
T ss_conf 8999986500-887884355476-457---52577887477621665566553456200231018999999999953898
Q ss_pred ECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCEE
Q ss_conf 00135775025789887898862710224789999999987--6417978998972899958979999999999977918
Q gi|254780486|r 259 IYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKI--ANKKIGFSSQSHIQSIVIGDNKSCLNIAKNLQKKGFD 336 (381)
Q Consensus 259 ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~--~~~~~g~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~ 336 (381)
+.+.+..+++.++++ +....++......+.++++ .....++++.++.+ ++. .++.+.|+++||+
T Consensus 234 ----~vn~~a~~aa~aal~---~~~~~~~~~~~~~~~r~~l~~~L~~~~~ps~aNFv--l~~-----~~~~~~L~~~gIl 299 (337)
T PRK03967 234 ----SLNILSEKIVRLMLD---HYDLIKERIDYIIKERERVYRELGDYAYPSDANFL--LLK-----LDAYDYLLENGIV 299 (337)
T ss_pred ----CCCHHHHHHHHHHHH---CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEE--EEE-----HHHHHHHHHCCEE
T ss_conf ----775999999999962---99999999999999999999981277789988199--972-----5899999849909
Q ss_pred EEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 98622888888870399962878999999999999999988738
Q gi|254780486|r 337 IRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 337 v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
|+.+. +.....+||++. |.+|.++++++|++++++..
T Consensus 300 VR~~~----~~~~~~iRIsvg---t~een~~ll~aLke~~e~~~ 336 (337)
T PRK03967 300 VRKLS----GRLEGHIRVTIG---KKEENDEFIKALKEFKENYG 336 (337)
T ss_pred EECCC----CCCCCEEEEECC---CHHHHHHHHHHHHHHHHHHC
T ss_conf 94899----999998999839---99999999999999999728
No 156
>PRK08069 consensus
Probab=99.89 E-value=3.9e-20 Score=145.63 Aligned_cols=332 Identities=14% Similarity=0.137 Sum_probs=190.5
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC----CCCEEEECCCCHH
Q ss_conf 897689803446566779889999999999863786887224436885899999999840128----8851674166024
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG----FEKMLYFGSGYAA 102 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g----~e~al~~~sG~~A 102 (381)
.|+++++|+.-| -.+..-|.+++++.++++ .--++.+- ..|..++.+++-+.+.+.+| .++.++++.+..|
T Consensus 28 ~g~~vi~l~~G~-pdf~~p~~i~~a~~~~~~-~~~~~Y~~---~~G~~~lreaia~~~~~~~g~~~~p~~V~it~G~~~a 102 (390)
T PRK08069 28 EGHDVIGLGAGE-PDFNTPEHIIDAAHKAMN-EGHTKYTP---SGGLQALKQEIVKKFKRDQGLAYDPSEIIVCTGAKHA 102 (390)
T ss_pred CCCCEEECCCCC-CCCCCCHHHHHHHHHHHH-CCCCCCCC---CCCHHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHH
T ss_conf 699847899978-999988999999999985-48998989---9672999999999999986899881118987888999
Q ss_pred HHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC---C----CHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
Q ss_conf 56556663168971004542026775266640876403056---8----8147899764310002478607971462157
Q gi|254780486|r 103 NMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH---N----NINSFAENINKWRKSGGKGFPWIVVESIYSM 175 (381)
Q Consensus 103 n~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H---n----D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm 175 (381)
-..++.++++|||.|++..=.-.+....+++.+++.+.++. | |+++|++.+. ++.+.+++.-.-..
T Consensus 103 l~~~~~~l~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~i~------~~~k~iil~~P~NP- 175 (390)
T PRK08069 103 LYTLFQVLLDEGDEVIIPTPYWVSYPEQVKLAGGKPVYVEGLEDNDFKITAEQLEEAIT------EKTKAVIINSPSNP- 175 (390)
T ss_pred HHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHCC------CCCCEEEECCCCCC-
T ss_conf 99999972799898998068664279999981880487145666787679999998544------36858998899698-
Q ss_pred CCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCCC-CEEEEEH-HCCCCCCCCCCCCCCCCCEE---EEEECCCCC
Q ss_conf 66134---6899999863136089861311222347776-4011000-01346521001346565302---675245100
Q gi|254780486|r 176 DGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGPLG-KGLTHII-EERNNVIVMHSCSKALGSSG---ALVGSNKII 247 (381)
Q Consensus 176 ~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~~G-~G~~~~~-~~~~~~iv~~TlsKa~g~~G---G~i~~~~~i 247 (381)
.|.+. .|++|.++|++||++++.||+|+.-+++... ..+.... +..++.|++.||||.|+..| ||+++++++
T Consensus 176 TG~v~s~e~l~~i~~la~~~~~~vi~DEiY~~l~~~~~~~~s~~~~~~~~~~~~i~~~s~SK~~~~~G~RiG~~~~~~~l 255 (390)
T PRK08069 176 TGMIYTKEELAALGEVCLEHDILIVSDEIYEKLIYGGAEHVSIAQLSNELKEQTIIINGVSKSHSMTGWRIGYAAGNKQI 255 (390)
T ss_pred CCCCCCCHHHHHHHHHHHHCCEEEEEEHHHHHHCCCCCCCCCHHHHCCCCCCCCCEECCCHHHCCCCCCCEEEEECCHHH
T ss_conf 68165506899999998756305985332365406998988989949543456410035302037763235887669999
Q ss_pred CCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCCCCCC---CCCC-EEEEEECCH--
Q ss_conf 10000121100001357750257898878988627-1022478999999998764179789---9897-289995897--
Q gi|254780486|r 248 YDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKKIGFS---SQSH-IQSIVIGDN-- 320 (381)
Q Consensus 248 i~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~~g~~---~~s~-I~~v~~gd~-- 320 (381)
++.+.+... +..++ .++....++.+++..-.+. .++++..+++...+.+......++. .++. .+.+-+.+.
T Consensus 256 i~~~~~~~~-~~~~~-~~~~~q~aa~~a~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~g~~~~~P~Gg~ylw~~~~~~~~ 333 (390)
T PRK08069 256 IKAMTNLAS-HSTSN-PTSIAQYGAIAAYAGSQEPVETMRQAFEERLNIIYDKLIQIPGFTCIKPQGAFYLFPNVKEAAA 333 (390)
T ss_pred HHHHHHHHH-HCCCC-CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCHHHC
T ss_conf 999999986-53577-7639999999998688687999999999999999999850668851479803899787731112
Q ss_pred ----HHHHHHHHHHH-HCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf ----99999999999-7791898622888888870399962878999999999999999988
Q gi|254780486|r 321 ----KSCLNIAKNLQ-KKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 321 ----~~a~~~~~~L~-~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
....+++++|+ +.||.+.|...=- ....+|++.. .+++++++.++.|+++++
T Consensus 334 ~~~~~~~~~~~~~ll~~~gV~v~PG~~Fg---~~~~~Rl~fa--~~~~~l~eal~RL~~~l~ 390 (390)
T PRK08069 334 LSGFETVDEFVKALLEEEKVALVPGSGFG---APDNVRLSYA--TSLELLEEAIERIHRFMK 390 (390)
T ss_pred CCCCCCHHHHHHHHHHHCCEEEECCCCCC---CCCCEEEEEE--CCHHHHHHHHHHHHHHHC
T ss_conf 26788899999999985999998187679---9983899984--999999999999999859
No 157
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.89 E-value=6.5e-20 Score=144.26 Aligned_cols=345 Identities=14% Similarity=0.148 Sum_probs=205.8
Q ss_pred HHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC--CHHHHHHHHHHHHHCCCC
Q ss_conf 999975983999289768980344656677988999999999986378688722443688--589999999984012888
Q gi|254780486|r 14 QKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGN--YNQHLELEEEAADFFGFE 91 (381)
Q Consensus 14 ~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~--~~~~~~lE~~lA~~~g~e 91 (381)
+++|++-. .+.++.=|+|-++.. + -.+.|+++..+.+...++. ++.|.-..|. ....++.=+++|+|+|.+
T Consensus 4 ~~~R~~FP--~l~~~~iYlDnAatt---~-~p~~V~~a~~~~~~~~~~n-~~~s~~~~~~~~~~~~e~aR~~iA~~lga~ 76 (398)
T TIGR03392 4 AQFRQQFP--ALQDGTVYLDSAATA---L-KPQAVIDATQQFYRLSSGT-VHRSQHQQAQSLTARYELARQQVARFLNAP 76 (398)
T ss_pred HHHHHHCC--CCCCCEEEEECCCCC---C-CCHHHHHHHHHHHHHCCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 99986584--889990886786326---8-9899999999999863488-875143999999999999999999970959
Q ss_pred --CEEEE-CCCCHHHHHHHHHH----CCCCCCCCHHHHCCHHHHHH----HHHCCCCCEEECCC-----CHHHHHHHHHH
Q ss_conf --51674-16602456556663----16897100454202677526----66408764030568-----81478997643
Q gi|254780486|r 92 --KMLYF-GSGYAANMAILSTL----PQATDLIVYDKLVHASIREG----INSGKAQAIAIPHN-----NINSFAENINK 155 (381)
Q Consensus 92 --~al~~-~sG~~An~~~i~~l----~~~~d~ii~D~~~HaSi~~g----~~ls~a~~~~f~Hn-----D~~~Le~~l~~ 155 (381)
+-++| ++++.++-.++.++ .+++|.|+.-..-|.|.... ++-.+.++..++-+ |+++|++.++.
T Consensus 77 ~~~~Iifts~~Te~~n~~~~~~~~~~~~~gd~ii~s~~EH~s~~~pw~~~~~~~g~~v~~~~~~~~~~~d~~~l~~~i~~ 156 (398)
T TIGR03392 77 DAENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIGADLLPDIRQLPELLTP 156 (398)
T ss_pred CCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCC
T ss_conf 98979995877999998987768872399898998244003423899988764485279961478898799999985257
Q ss_pred HHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCC
Q ss_conf 10002478607971462157661346899999863136089861311222347776401100001346521001346565
Q gi|254780486|r 156 WRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALG 235 (381)
Q Consensus 156 ~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g 235 (381)
.+.+|.+-.+-+..|.+.|+++|.++|+++|+++++|-+|++|.+ + -.....+.++++.+.-|-+|
T Consensus 157 -------~T~lVsi~~vsn~~G~i~pi~~I~~~~~~~g~~~~vDa~Q~~g~~-~------idv~~~~~D~~~~S~hKl~G 222 (398)
T TIGR03392 157 -------RTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHG-P------PDVQALDIDFYAFSGHKLYG 222 (398)
T ss_pred -------CCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCC-C------CCCCCCCCCEEEEECCCCCC
T ss_conf -------870899825556788858799999999865974786334115620-3------34102678779986553569
Q ss_pred CEE-EEEECCCCCCCCCCC-CC-----------------CCEEC-CCCCCCCHHHHHHHHHHHHHHCC--CHHHHHHHHH
Q ss_conf 302-675245100100001-21-----------------10000-13577502578988789886271--0224789999
Q gi|254780486|r 236 SSG-ALVGSNKIIYDYLIN-YA-----------------KPFIY-TTSPSPILAVVACEALKLIKRKP--ALHKSLLQLI 293 (381)
Q Consensus 236 ~~G-G~i~~~~~ii~~l~~-~~-----------------~~~if-st~l~P~~~aaa~aal~~l~~~~--~~~~~l~~~~ 293 (381)
..| |++..++++.+.+.- .+ .++.| ++..+.+..++..++++.+.+.. ...++...+.
T Consensus 223 P~G~G~Ly~~~~~~~~l~p~~~Gg~~~~~~~~~~~~~~~~~~r~e~GT~n~~~i~gl~~al~~l~~~~~~~~~~~~~~L~ 302 (398)
T TIGR03392 223 PTGIGVLYGKTELLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEAWSVSLA 302 (398)
T ss_pred CCCEEEEEECCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 98418999841147437973579973443347776445550211468854878999999999999649999999999999
Q ss_pred HHHHHHHHCCCCC----CCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCC----CC-CCEEEEECCCCCCHHH
Q ss_conf 9999876417978----9989728999589799999999999779189862288888----88-7039996287899999
Q gi|254780486|r 294 NITDKIANKKIGF----SSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVP----IN-TARLRISITLNVDEPT 364 (381)
Q Consensus 294 ~~~~~~~~~~~g~----~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp----~~-~~rlRi~v~a~~t~ed 364 (381)
.+..+......|+ ...++++.+.+.+ .....+...|-++||.++.-..-+-| .| .+.||++++..+|+||
T Consensus 303 ~~~~~~l~~l~g~~~~~~~~~~~~~f~~~~-~~~~~l~~~L~~~gi~v~~G~~ca~~~l~a~g~~g~iRvS~~~ynT~ed 381 (398)
T TIGR03392 303 DLAEERLAQLPGFRSFRCPGSSLLAFDFAG-VHHSDLAALLAESGIALRAGQHCAQPLMAALGVSGTLRASFAPYNTQQD 381 (398)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCEEEEEECC-CCHHHHHHHHHHCCCEEECCCCCCHHHHHHHCCCCEEEEECCCCCCHHH
T ss_conf 999999863899644579999679998799-3999999999778979966866548999986899879996788889999
Q ss_pred HHHHHHHHHHHHHHHC
Q ss_conf 9999999999988738
Q gi|254780486|r 365 IVKLFDILPQIISEGN 380 (381)
Q Consensus 365 i~~~~~~l~~v~~E~~ 380 (381)
||+++++|+++++.+.
T Consensus 382 Id~li~aL~~~l~~l~ 397 (398)
T TIGR03392 382 VDALVDAVGAALELLN 397 (398)
T ss_pred HHHHHHHHHHHHHHHC
T ss_conf 9999999999999843
No 158
>PRK08912 hypothetical protein; Provisional
Probab=99.89 E-value=1.6e-20 Score=148.04 Aligned_cols=333 Identities=14% Similarity=0.103 Sum_probs=192.6
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC---C--EEEECCCCH
Q ss_conf 89768980344656677988999999999986378688722443688589999999984012888---5--167416602
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE---K--MLYFGSGYA 101 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e---~--al~~~sG~~ 101 (381)
.+++++||+.-+= .+...|.+++++.+++. .-.++.+.+. |..++.+++-+.+.+.+|.+ + .++++.+-.
T Consensus 24 ~~~~~I~L~~G~P-d~~~p~~i~~a~~~a~~-~~~~~Y~~~~---G~~~LR~aia~~~~~~~g~~~~p~~~V~vt~Ga~~ 98 (387)
T PRK08912 24 REHGAINLGQGFP-DDPGPEDVRRAAADALL-DGYNQYPPMM---GLPELRQAVAAHYARFHGLDLDPMTEVMVTSGATE 98 (387)
T ss_pred CCCCCEECCCCCC-CCCCCHHHHHHHHHHHH-CCCCCCCCCC---CHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHH
T ss_conf 3799277369789-99988999999999985-2999898998---72999999999999986899898872998766899
Q ss_pred HHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC------CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
Q ss_conf 456556663168971004542026775266640876403056------88147899764310002478607971462157
Q gi|254780486|r 102 ANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH------NNINSFAENINKWRKSGGKGFPWIVVESIYSM 175 (381)
Q Consensus 102 An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H------nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm 175 (381)
|...++.+++++||.|++..=...+-...+++.+++.+.++- -|.+.|++.+. ++.+.+|+.-.-..
T Consensus 99 al~~~~~al~~pGD~Vlv~~P~y~~y~~~~~~~G~~~~~v~~~~~~~~~d~~~l~~~~~------~~tk~iil~~P~NP- 171 (387)
T PRK08912 99 ALAAALLALVEPGDEVVLFQPLYDSYLPIIRRAGGVPRLVRLEPPHWRLPEAALAAAFS------PRTKAVLLNNPLNP- 171 (387)
T ss_pred HHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHCCC------CCCEEEEECCCCCC-
T ss_conf 99999999669989899948808117999997298899756558777889999985278------88669998999898-
Q ss_pred CCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCC-CCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCC
Q ss_conf 66134---6899999863136089861311222347-776401100001346521001346565302---6752451001
Q gi|254780486|r 176 DGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCG-PLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIY 248 (381)
Q Consensus 176 ~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G-~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii 248 (381)
.|.+. .+++|.++|++||++++.||+++.-++. +.-..+....+..+++|.++||||.|+..| ||++++++++
T Consensus 172 TG~v~s~e~l~~l~~~a~~~~i~vi~DEiY~~l~~~~~~~~~~~~~~~~~~~~i~i~S~SK~~~m~G~RiG~~~~~~~li 251 (387)
T PRK08912 172 AGKVFPREDLALLAEFCQRHDAVAICDEVWEHVVFDGRRHIPLMALPGMRERTVKIGSAGKIFSLTGWKVGFVCAAPPLL 251 (387)
T ss_pred CCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHEEECCCCCCHHHCCCCCCCCEEEECCCCCEECCCCCCEEEEEECHHHH
T ss_conf 88568699999999988657979980265233156786540444066766736998567775205533279998399999
Q ss_pred CCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHCCCCCC---CCCC-EEEEEE---CCH
Q ss_conf 000012110000135775025789887898862-71022478999999998764179789---9897-289995---897
Q gi|254780486|r 249 DYLINYAKPFIYTTSPSPILAVVACEALKLIKR-KPALHKSLLQLINITDKIANKKIGFS---SQSH-IQSIVI---GDN 320 (381)
Q Consensus 249 ~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~-~~~~~~~l~~~~~~~~~~~~~~~g~~---~~s~-I~~v~~---gd~ 320 (381)
+.+... ..++.. +.|+....++.+++..-.+ -.++++.++++...+.+ .....+++ .+.. .+.+.+ +-.
T Consensus 252 ~~l~~~-~~~~~~-~~~~~~Q~a~a~~l~~~~~~~~~~~~~~~~rr~~l~~-~L~~~g~~~~~~~G~~~~~~~~~~~~~~ 328 (387)
T PRK08912 252 RVLAKA-HQFLTF-TTPPNLQRAVAYGLGKPDDYFEGMRADLARSRDRLAA-GLRRIGFPVLPSQGTYFLTVDLAPLGLA 328 (387)
T ss_pred HHHHHH-HHHCCC-CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-HHHHCCCEEECCCCEEEEEEECCCCCCC
T ss_conf 999999-875855-7669999999999738779999999999999999999-9997698562798158998851455899
Q ss_pred HHHHHHHHHHH-HCCEEEEEEC--CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 99999999999-7791898622--888888870399962878999999999999999988
Q gi|254780486|r 321 KSCLNIAKNLQ-KKGFDIRAIR--PPTVPINTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 321 ~~a~~~~~~L~-~~Gi~v~~i~--~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
....+++.+|+ +.||.+.|.. |+.- .++..+|++.. .++|+|++.++.|.++++
T Consensus 329 ~~~~~f~~~ll~e~gV~~vPG~~F~~~~-~~~~~iRlsfa--~~~e~l~ea~~RL~~~lk 385 (387)
T PRK08912 329 EDDVAFCRRLVEEAGVAAIPVSAFYEED-PVTSVVRFCFA--KRDATLDEAVERLAAAFR 385 (387)
T ss_pred CCHHHHHHHHHHHCCEEEECCCCCCCCC-CCCCEEEEEEC--CCHHHHHHHHHHHHHHHH
T ss_conf 8999999999996899998150128999-99985999979--999999999999999983
No 159
>PRK07310 consensus
Probab=99.89 E-value=5.7e-20 Score=144.64 Aligned_cols=350 Identities=12% Similarity=0.112 Sum_probs=197.2
Q ss_pred CCCHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCHHHHHH
Q ss_conf 88657899999999997598399928976898034465667798899999999998637868-87224436885899999
Q gi|254780486|r 2 KNIQMSFYEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIG-SGGSRLLCGNYNQHLEL 80 (381)
Q Consensus 2 ~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~-~~~sr~~~G~~~~~~~l 80 (381)
+.....-+.++-.+++++ |+++++|+--|- .|...|.++++++++++. -.++ .+- ..|..++.+++
T Consensus 11 ~~s~~~~i~~~a~~l~~~--------G~dvi~L~iG~p-df~~p~~i~~a~~~a~~~-~~~~~Y~~---~~G~~~lR~Ai 77 (395)
T PRK07310 11 EESVTLAAGARAKALKAQ--------GRDILSLTLGEP-DFVTPKNIQDAAIESIEN-GRASFYTV---ASGLPELKAAI 77 (395)
T ss_pred CCCHHHHHHHHHHHHHHC--------CCCEEECCCCCC-CCCCCHHHHHHHHHHHHC-CCCCCCCC---CCCHHHHHHHH
T ss_conf 968999999999999977--------997377689589-999899999999999828-98887899---74739999999
Q ss_pred HHHHHHHCC----CCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC---CC----CHHHH
Q ss_conf 999840128----88516741660245655666316897100454202677526664087640305---68----81478
Q gi|254780486|r 81 EEEAADFFG----FEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP---HN----NINSF 149 (381)
Q Consensus 81 E~~lA~~~g----~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~---Hn----D~~~L 149 (381)
-+.+.+.+| .|..++.+.+..|...++.++++|||.|+.-.=...+....+++.+++.+.++ .| |+++|
T Consensus 78 a~~~~~~~g~~v~pd~I~vt~G~~~al~~~~~~l~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l 157 (395)
T PRK07310 78 ATYFENFYGYHLSPNQIVVGTGAKFILYAFFMAVLNPGDEVIIPTPYWVSYSDQVKMAEGVPVFVQAKEENHFKVTVEQL 157 (395)
T ss_pred HHHHHHHHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHH
T ss_conf 99989987899883209987788999999999974999989983787754699999759989997567445745049999
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCC-CCCEEEEEH-HCCCCC
Q ss_conf 9976431000247860797146215766134---68999998631360898613112223477-764011000-013465
Q gi|254780486|r 150 AENINKWRKSGGKGFPWIVVESIYSMDGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGP-LGKGLTHII-EERNNV 224 (381)
Q Consensus 150 e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~-~G~G~~~~~-~~~~~~ 224 (381)
++.+ ..+.+.+|+.-.-.. .|.+. .|++|.++|++||++++.||+|+--++.. .-....... +..+++
T Consensus 158 ~~~~------~~~~k~iil~~P~NP-TG~v~s~~~l~~l~~~a~~~~i~visDEiY~~l~~~g~~~~p~~~~~~~~~~~~ 230 (395)
T PRK07310 158 EAAR------TSKTKVVLLNSPSNP-TGMIYSAEELRAIGEWAVEHDILILADDIYGRLVYNGNQFTPISSLSEAIRKQT 230 (395)
T ss_pred HHHC------CCCCEEEEECCCCCC-CCCCCCCCHHHHHHHHHHHCCEEEEECCCCEEEECCCCCCCCHHHHHHHHCCCC
T ss_conf 9746------589749998999798-562663541467765565268799943652100148988888888412432573
Q ss_pred CCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHH
Q ss_conf 21001346565302---67524510010000121100001357750257898878988627-102247899999999876
Q gi|254780486|r 225 IVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIA 300 (381)
Q Consensus 225 iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~ 300 (381)
|++.||||.|+..| ||+++++++++.+.... ....+ ..+.+...++.++++--++. .++++.++++........
T Consensus 231 i~~~s~SK~f~~~G~RiG~~v~~~~~i~~~~~~~-~~~~~-~~~~~~q~aa~~al~~~~~~~~~~~~~~~~r~~~~~~~l 308 (395)
T PRK07310 231 IVINGVSKTYAMTGWRVGFAVGEPEIISAMSKIA-GQTTS-NLTAVSQYAAIEAFTGSQSSVEEMRLAFEERLNIIYPLL 308 (395)
T ss_pred EEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHH-HHHCC-CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5884012356776654899977999999999998-65047-813899999999996888999999999999999999987
Q ss_pred HCCCCCCCCCC--EEEEE--ECC------HHHHHHHHHHHHH-CCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf 41797899897--28999--589------7999999999997-7918986228888888703999628789999999999
Q gi|254780486|r 301 NKKIGFSSQSH--IQSIV--IGD------NKSCLNIAKNLQK-KGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLF 369 (381)
Q Consensus 301 ~~~~g~~~~s~--I~~v~--~gd------~~~a~~~~~~L~~-~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~ 369 (381)
....|+....| -..++ +.. .....+++.+|++ .||.+.|...=-. ...+|++.. .++++|++.+
T Consensus 309 ~~~~g~~~~~P~g~~~~w~~~~~~~~~~g~~d~~~~~~~ll~~~gV~v~PG~~FG~---~~~vRl~~a--~~~~~l~eal 383 (395)
T PRK07310 309 AQVPGFEVVKPQGAFYLFPNVKKAMEMKGYTDVTDFTTAILEEVGVALVTGAGFGA---PENVRLSYA--TDLETLKEAV 383 (395)
T ss_pred HCCCCCEEECCCEEEEEEEECCCHHCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC---CCCEEEEEC--CCHHHHHHHH
T ss_conf 30899687269866898166651112478898999999999849999988976699---998899980--9999999999
Q ss_pred HHHHHHHHH
Q ss_conf 999999887
Q gi|254780486|r 370 DILPQIISE 378 (381)
Q Consensus 370 ~~l~~v~~E 378 (381)
+.|++.++.
T Consensus 384 ~RL~~~l~s 392 (395)
T PRK07310 384 RRLHVFMES 392 (395)
T ss_pred HHHHHHHHH
T ss_conf 999999987
No 160
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.89 E-value=5.2e-20 Score=144.89 Aligned_cols=345 Identities=14% Similarity=0.141 Sum_probs=204.5
Q ss_pred HHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC--CCHHHHHHHHHHHHHCCC
Q ss_conf 999997598399928976898034465667798899999999998637868872244368--858999999998401288
Q gi|254780486|r 13 LQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCG--NYNQHLELEEEAADFFGF 90 (381)
Q Consensus 13 l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G--~~~~~~~lE~~lA~~~g~ 90 (381)
++++|++-. .+.++.=|+|-++. ++ -.+.|++++.+.....++. .+.|..-.| ....+++.-+++|+++|.
T Consensus 6 ~~~~R~~FP--~l~~~~iYlD~Aat---t~-~p~~V~~a~~~~~~~~~~n-~~~~~~~~~~~~~~~~e~aR~~iA~llga 78 (401)
T PRK10874 6 PAQFRAQFP--ALQDAGVYLDSAAT---AL-KPQAVIEATQQFYSLSAGN-VHRSQFAEAQRLTARYEAAREKVAQLLNA 78 (401)
T ss_pred HHHHHHHCC--CCCCCCEEEECCCC---CC-CCHHHHHHHHHHHHHCCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 999996583--77999489748752---68-9999999999999864489-88641089999999999999999998296
Q ss_pred C--CEEEE-CCCCHHHHHHHHHH----CCCCCCCCHHHHCCHHHHHH----HHHCCCCCEEECCC-----CHHHHHHHHH
Q ss_conf 8--51674-16602456556663----16897100454202677526----66408764030568-----8147899764
Q gi|254780486|r 91 E--KMLYF-GSGYAANMAILSTL----PQATDLIVYDKLVHASIREG----INSGKAQAIAIPHN-----NINSFAENIN 154 (381)
Q Consensus 91 e--~al~~-~sG~~An~~~i~~l----~~~~d~ii~D~~~HaSi~~g----~~ls~a~~~~f~Hn-----D~~~Le~~l~ 154 (381)
+ +-++| ++++.++-.++..+ .+++|.|+.-..-|.|.... ++-.+++++.++-+ |+++|++.+.
T Consensus 79 ~~~~eI~fts~~Te~~n~~~~~~~~~~~~~gd~vv~s~~Eh~s~~~pw~~~~~~~g~~v~~~p~~~~g~~d~~~l~~~i~ 158 (401)
T PRK10874 79 PDAKNIVWTRGTTESINMVAQCYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLGADRLPDVDLLPELIT 158 (401)
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHC
T ss_conf 99897999796589999999999997358998388704413541589999998539636994158888759999999855
Q ss_pred HHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCC
Q ss_conf 31000247860797146215766134689999986313608986131122234777640110000134652100134656
Q gi|254780486|r 155 KWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKAL 234 (381)
Q Consensus 155 ~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~ 234 (381)
. .+.+|++-.+-...|.+.|+++|.++|+++|+++++|-+|++|.+ + .+ ....+.++++.+.-|-+
T Consensus 159 ~-------~T~lVai~~vsn~~G~~~pv~~I~~~~~~~g~~~~vDa~Q~~g~~-~-----id-v~~l~vD~l~~S~HKl~ 224 (401)
T PRK10874 159 P-------RSRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHF-P-----AD-VQQLDIDFYAFSGHKLY 224 (401)
T ss_pred C-------CCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCC-C-----CC-HHHHCCCEEEEECHHCC
T ss_conf 8-------965999979667886557699999999764977997530137742-5-----46-67843988998703316
Q ss_pred CCEE-EEEECCCCCCCCCCC-CCC-----------------CEEC-CCCCCCCHHHHHHHHHHHHHHCC--CHHHHHHHH
Q ss_conf 5302-675245100100001-211-----------------0000-13577502578988789886271--022478999
Q gi|254780486|r 235 GSSG-ALVGSNKIIYDYLIN-YAK-----------------PFIY-TTSPSPILAVVACEALKLIKRKP--ALHKSLLQL 292 (381)
Q Consensus 235 g~~G-G~i~~~~~ii~~l~~-~~~-----------------~~if-st~l~P~~~aaa~aal~~l~~~~--~~~~~l~~~ 292 (381)
|..| |++..++++.+.+.- .+. +..| ++..+.+..++..++++.+.+.. ...++.+.+
T Consensus 225 GP~G~G~Lyv~~~~~~~l~P~~~Gg~~~~~~~~~~~~~~~~~~r~e~GT~n~~~i~~l~aal~~l~~~~~~~~~~~~~~L 304 (401)
T PRK10874 225 GPTGIGVLYGKSELLEAMSPWLGGGKMLTEVSFDGFTPQSAPWRLEAGTPNVAGVIGLSAALEWLADIDIEQAESWSRSL 304 (401)
T ss_pred CCCCEEEEEECCCHHHHCCCEECCCCCCCCCCCCCCCCCCCCHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 99814999985303642786535875400234676542555000257783288999999999999963999999999999
Q ss_pred HHHHHHHHHCCCCC----CCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCC----CC-CCEEEEECCCCCCHH
Q ss_conf 99999876417978----9989728999589799999999999779189862288888----88-703999628789999
Q gi|254780486|r 293 INITDKIANKKIGF----SSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVP----IN-TARLRISITLNVDEP 363 (381)
Q Consensus 293 ~~~~~~~~~~~~g~----~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp----~~-~~rlRi~v~a~~t~e 363 (381)
..+..+......|+ ...++|+++.+.+ ....++...|.++||.++.-..-+-| .| .+.||++++..+|++
T Consensus 305 ~~~~~~~L~~~~g~~~~~~~~~~i~sf~~~g-i~~~~l~~~L~~~gi~v~~g~~ca~~~l~alg~~g~iRvS~~~ynT~~ 383 (401)
T PRK10874 305 ATLAEDALAKRPGFRSFRCQDSSLLAFDFAG-VHHSDMVTLLAEYGIALRAGQHCAQPLLAALGVTGTLRASFAPYNTQS 383 (401)
T ss_pred HHHHHHHHHHCCCCCCCCCCCCCEEEEEECC-CCHHHHHHHHHHCCCEEECCCCCCHHHHHHHCCCCEEEEECCCCCCHH
T ss_conf 9999999852899653479999889998799-599999999977897896185342899998599997999658888999
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999998873
Q gi|254780486|r 364 TIVKLFDILPQIISEG 379 (381)
Q Consensus 364 di~~~~~~l~~v~~E~ 379 (381)
|||+++++|+++++.+
T Consensus 384 dId~li~al~~~v~~l 399 (401)
T PRK10874 384 DVDALVNAVDRALELL 399 (401)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999983
No 161
>PRK12414 putative aminotransferase; Provisional
Probab=99.89 E-value=2.4e-20 Score=146.98 Aligned_cols=328 Identities=16% Similarity=0.140 Sum_probs=190.5
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC-----CCEEEECCCCH
Q ss_conf 8976898034465667798899999999998637868872244368858999999998401288-----85167416602
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF-----EKMLYFGSGYA 101 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~-----e~al~~~sG~~ 101 (381)
.+++++||+--+= .+...|++++++.+++. .--++.+.++ |...+-+++-+.+.+.+|. ++.++++.+..
T Consensus 27 ~~~dvI~l~~G~P-d~~~p~~i~~a~~~a~~-~~~~~Y~~~~---G~~~LReaia~~~~~~~g~~~dp~~~i~vt~G~~~ 101 (384)
T PRK12414 27 AQHDALNLSQGAP-NFAPDPALVEGVARAMR-DGHNQYAPMA---GIAALREALAEKTERLYGARYDPDTEVTVIASASE 101 (384)
T ss_pred CCCCCEECCCCCC-CCCCCHHHHHHHHHHHH-CCCCCCCCCC---CCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHH
T ss_conf 3899688189899-99998999999999996-1999898998---71999999999999996899998880998479899
Q ss_pred HHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC------CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
Q ss_conf 45655666316897100454202677526664087640305------688147899764310002478607971462157
Q gi|254780486|r 102 ANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP------HNNINSFAENINKWRKSGGKGFPWIVVESIYSM 175 (381)
Q Consensus 102 An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~------HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm 175 (381)
|-..++.++++|||.|++..=.-.+-...+++.+++.+.++ +-|++++++.+. ++.+.+++.-.=..
T Consensus 102 al~~~~~al~~pGD~Vlv~~P~y~~y~~~~~~~Ga~~v~v~~~~~~~~~d~~~l~~~~~------~~tk~iil~~P~NP- 174 (384)
T PRK12414 102 GLYAAISALVHPGDEVIYFEPSFDSYAPIVRLQGATPVAIKLSPEHFRVNWDEVAAAIT------PRTRMIIVNTPHNP- 174 (384)
T ss_pred HHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHCC------CCCEEEEECCCCCC-
T ss_conf 99999999679999899908970656999998599899986685568889999996277------78669997999898-
Q ss_pred CCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCC-CCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCC
Q ss_conf 66134---6899999863136089861311222347-776401100001346521001346565302---6752451001
Q gi|254780486|r 176 DGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCG-PLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIY 248 (381)
Q Consensus 176 ~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G-~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii 248 (381)
.|.+. .+++|.++|++||++++.||+|+.-+++ +.-..+...-+..+++|+++||||.|+..| ||++++++++
T Consensus 175 TG~v~s~e~l~~l~~la~~~~i~ii~DE~Y~~l~f~g~~~~s~~~~~~~~~~~I~i~S~SK~~~~~G~RvG~~v~p~~li 254 (384)
T PRK12414 175 TATVFSEADLARLAQLTRGTDIVVLSDEVYEHVVFDGARHHSMARHRELAERSVIVSSFGKSYHVTGWRVGYCLAPAELM 254 (384)
T ss_pred CCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHEECCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECHHHH
T ss_conf 77137566699999987515889996663233031787776643151201133235677500002651279998489999
Q ss_pred CCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHH-HHHHCCCCC-CCCCCEE-EEEE---CC
Q ss_conf 000012110000135775025789887898862710---2247899999999-876417978-9989728-9995---89
Q gi|254780486|r 249 DYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPA---LHKSLLQLINITD-KIANKKIGF-SSQSHIQ-SIVI---GD 319 (381)
Q Consensus 249 ~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~---~~~~l~~~~~~~~-~~~~~~~g~-~~~s~I~-~v~~---gd 319 (381)
+.++.. ..++... .+.+.-.++.++++ +.+. +++..+++..++. .+...++.+ +..+... .+.+ ++
T Consensus 255 ~~~~~~-~~~~~~~-~~~~~Q~a~~~~l~---~~~~~~~~~~~y~~rrd~l~~~L~~~~~~~~~p~G~fy~~~~~~~~~~ 329 (384)
T PRK12414 255 DEIRKV-HQFMVFS-ADTPMQYAFAEALA---RPASYLGLSAFYQRKRDLLARELADSRFELLPSEGSFFMLARFRHFSD 329 (384)
T ss_pred HHHHHH-HHHCCCC-CCHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCCC
T ss_conf 999999-9756578-67899999999982---982499999999999999999767569878789807999997687899
Q ss_pred HHHHHHHHHHHH-HCCEEEEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 799999999999-7791898622-888888870399962878999999999999999
Q gi|254780486|r 320 NKSCLNIAKNLQ-KKGFDIRAIR-PPTVPINTARLRISITLNVDEPTIVKLFDILPQ 374 (381)
Q Consensus 320 ~~~a~~~~~~L~-~~Gi~v~~i~-~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~ 374 (381)
. ...+++.+|+ ++||.+.|.. |=.-..+...+||+... +++++++.++.|++
T Consensus 330 ~-~d~~~~~~ll~e~gV~vvPG~~Fg~~g~~~g~iRlsfa~--~~e~l~eg~~RL~~ 383 (384)
T PRK12414 330 E-SDSDFVLRLIRDARVATIPLSAFYADGTDTGVIRLSFSK--DDATLVEGARRLCS 383 (384)
T ss_pred C-CHHHHHHHHHHHCCEEEEECHHHCCCCCCCCEEEEEECC--CHHHHHHHHHHHHC
T ss_conf 9-999999999985999998263217999989989999679--99999999999703
No 162
>PRK09082 putative aminotransferase; Validated
Probab=99.89 E-value=3.5e-20 Score=145.96 Aligned_cols=330 Identities=13% Similarity=0.110 Sum_probs=191.7
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC----C-CEEEECCCCH
Q ss_conf 8976898034465667798899999999998637868872244368858999999998401288----8-5167416602
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF----E-KMLYFGSGYA 101 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~----e-~al~~~sG~~ 101 (381)
.+++.+||+--+= .+...|.+++++.++++. --++.+.++ |..++-+++-+.+.+.+|. | +.++++.+..
T Consensus 28 ~~~~~I~L~~G~P-d~~~P~~i~~a~~~a~~~-~~~~Y~~~~---G~~~LReaiA~~~~~~~g~~~~p~~eI~vT~Ga~~ 102 (386)
T PRK09082 28 AEHGAINLSQGFP-DFDGPPRLVEALAYAMAA-GHNQYPPMT---GVAALREAIADKTARLYGRRYDADSEITVTAGATE 102 (386)
T ss_pred HCCCCEECCCCCC-CCCCCHHHHHHHHHHHHC-CCCCCCCCC---CCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHH
T ss_conf 0599887279899-998789999999999965-999898987---71999999999999996899898883898778899
Q ss_pred HHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCC------CHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
Q ss_conf 4565566631689710045420267752666408764030568------8147899764310002478607971462157
Q gi|254780486|r 102 ANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHN------NINSFAENINKWRKSGGKGFPWIVVESIYSM 175 (381)
Q Consensus 102 An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~Hn------D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm 175 (381)
|-..++.++++|||.|+...=.-.+-...+++.|++.+.++-. |++++++.+. ++.+.+++.-.=..
T Consensus 103 al~~~~~al~~pGD~Vlv~~P~Y~~y~~~~~~~G~~~v~vpl~~~~~~~d~~~l~~~i~------~~tk~iil~sP~NP- 175 (386)
T PRK09082 103 ALFAAILALVRPGDEVIVFDPSYDSYAPAIELAGGRAVRVALQPPDFRVDWQRFAAAIT------PRTRLIILNTPHNP- 175 (386)
T ss_pred HHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHCC------CCCEEEEECCCCCC-
T ss_conf 99999999759999899926862879999998499899926779888879999996367------57649997999697-
Q ss_pred CCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCC-CCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCC
Q ss_conf 66134---6899999863136089861311222347-776401100001346521001346565302---6752451001
Q gi|254780486|r 176 DGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCG-PLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIY 248 (381)
Q Consensus 176 ~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G-~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii 248 (381)
+|.+. .+++|.++|++||++++.||+|+.-++. +.-..+...-+..+++|+++||||.|+..| ||++++++++
T Consensus 176 TG~v~s~~~l~~l~~la~~~~i~ii~DE~Y~~l~~d~~~~~s~~~~~~~~~~~i~i~S~SK~~~~~G~RiG~~v~p~~l~ 255 (386)
T PRK09082 176 SGTVWSAADMDALAQLIAGTDILVLSDEVYEHIVFDGQGHASVLRHPELRERAFVVSSFGKTYHVTGWKVGYCVAPAALS 255 (386)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEECCCHHHHCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECHHHH
T ss_conf 36013635599999999981947971122233113898886844486533454443244424578751059998789999
Q ss_pred CCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHH----HHHHHHHH-HHHHHCCCCC-CCCCCE-EEEEECC--
Q ss_conf 0000121100001357750257898878988627102247----89999999-9876417978-998972-8999589--
Q gi|254780486|r 249 DYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKS----LLQLINIT-DKIANKKIGF-SSQSHI-QSIVIGD-- 319 (381)
Q Consensus 249 ~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~----l~~~~~~~-~~~~~~~~g~-~~~s~I-~~v~~gd-- 319 (381)
+.++.. ..+...+..+|... ++.+. ++..++..+. .+++...+ +.+....+.+ +.++.. ..+.+..
T Consensus 256 ~~~~~~-~~~~~~~~~~~~Q~-a~a~~---l~~~~~~~~~~~~~y~~rrd~l~~~L~~~~~~~~~~~G~~f~~~~~~~~~ 330 (386)
T PRK09082 256 AEFRKV-HQYNTFTVNTPAQL-ALADY---LRAEPEHYLELPAFYQAKRDRFRAALANSRFKLLPCEGTYFQLVDYSAIS 330 (386)
T ss_pred HHHHHH-HHHCCCCCCHHHHH-HHHHH---HHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCC
T ss_conf 999999-98645787689999-99999---96695899999999999999999999867988847992599988603489
Q ss_pred HHHHHHHHHHH-HHCCEEEEEE-CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 79999999999-9779189862-28888888703999628789999999999999999
Q gi|254780486|r 320 NKSCLNIAKNL-QKKGFDIRAI-RPPTVPINTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 320 ~~~a~~~~~~L-~~~Gi~v~~i-~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
.....+++++| .++||.+.|. .|=.-+.+...+|++... ++|+|+..++.|.++
T Consensus 331 ~~~~~~f~~~l~~e~gV~v~PG~~F~~~~~~~~~iRl~fa~--~~e~l~ea~~RLakl 386 (386)
T PRK09082 331 DLNDVEFCQWLTREHGVAAIPLSVFYADPFPHRLVRFCFAK--QEETLDAAAERLCQL 386 (386)
T ss_pred CCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCEEEEEECC--CHHHHHHHHHHHHHC
T ss_conf 98999999999985899998271105799999979999689--999999999998429
No 163
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.89 E-value=1.5e-19 Score=142.04 Aligned_cols=342 Identities=13% Similarity=0.098 Sum_probs=197.8
Q ss_pred HHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 99999999997598399928976898034465667798899999999998637868872244368858999999998401
Q gi|254780486|r 8 FYEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADF 87 (381)
Q Consensus 8 ~~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~ 87 (381)
-+.++..++++ .|+++++|+--|- .|...|.+++++.++++. --++.+-+ .|..++.+++-+.+.+.
T Consensus 20 ~~~~~a~~l~~--------~G~dvi~L~iG~p-df~~p~~i~~a~~~al~~-~~~~Y~~~---~G~~eLReAia~~~~~~ 86 (402)
T PRK06107 20 AAAARARELRA--------AGRSIVDLTVGEP-DFDTPDHIKAAAVAAIER-GETKYTLV---NGTPALRKAIIAKMERR 86 (402)
T ss_pred HHHHHHHHHHH--------CCCCEEECCCCCC-CCCCCHHHHHHHHHHHHC-CCCCCCCC---CCCHHHHHHHHHHHHHH
T ss_conf 99999999997--------7997277889898-999789999999999855-99999699---88899999999999998
Q ss_pred CCC----CCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC--C-----CCHHHHHHHHHHH
Q ss_conf 288----8516741660245655666316897100454202677526664087640305--6-----8814789976431
Q gi|254780486|r 88 FGF----EKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP--H-----NNINSFAENINKW 156 (381)
Q Consensus 88 ~g~----e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~--H-----nD~~~Le~~l~~~ 156 (381)
+|. |..++.+.+..|-..++.++++|||.|++-.=.-.+-...+.+.+++.+.++ . -|+++||+.+..
T Consensus 87 ~g~~v~p~~I~vt~G~~~al~~~~~al~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~~~~p~~~~~~~~~d~d~le~~~~~- 165 (402)
T PRK06107 87 NGLHYADNEICVGGGAKQAIFLALMATLEEGDEVIIPAPYWVSYPDMVLANDGTPVIVPCPEEDGFKLTAEALEAAITP- 165 (402)
T ss_pred HCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCCEEECCCCCCCCCCCCHHHHHHHCCC-
T ss_conf 6899982049986888999999999957999989981686653799999839956736878234875899999974564-
Q ss_pred HHCCCCCCCEEEECCCCCCCCCHH---HHHHHHHHHHHC-CEEEEECCCCCCCCCCCCCC-EEEE-EHHCCCCCCCCCCC
Q ss_conf 000247860797146215766134---689999986313-60898613112223477764-0110-00013465210013
Q gi|254780486|r 157 RKSGGKGFPWIVVESIYSMDGDKA---PLDDLVKIANDY-DGFIVVDEAHATGVCGPLGK-GLTH-IIEERNNVIVMHSC 230 (381)
Q Consensus 157 ~~~~~~~~~~vv~egv~Sm~G~~a---pL~~i~~l~~~y-~~~LivDEah~~Gv~G~~G~-G~~~-~~~~~~~~iv~~Tl 230 (381)
+.+.+|+.-.=.. .|.+. .|.+|.++|.+| +++++.||+|+.-+++..-. .... .-+..+++|++.||
T Consensus 166 -----~tk~iil~~P~NP-TG~v~s~~~l~~i~~i~~~~~~i~iisDEiY~~l~~~~~~~~~~~~~~p~~~~~~i~i~s~ 239 (402)
T PRK06107 166 -----RTRWLILNAPSNP-TGAAYSRDELRALADVLLRHPHVLVLTDDIYDHIRFDDEPVTHLLTAAPELRDRVLLTNGV 239 (402)
T ss_pred -----CCEEEEECCCCCC-CCCCCCHHHHHHHHHHHHHCCCCEEEEEHHHHHHEECCCCCCCHHHHCHHHHCCCEEECCC
T ss_conf -----7669998899898-9966534899999887752489328622202552218988886898582442254474245
Q ss_pred CCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHCCC
Q ss_conf 46565302---67524510010000121100001357750257898878988627102---2478999999998764179
Q gi|254780486|r 231 SKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL---HKSLLQLINITDKIANKKI 304 (381)
Q Consensus 231 sKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~---~~~l~~~~~~~~~~~~~~~ 304 (381)
||+|+..| ||+++++++++.+... ..++.+ ..+++...++.++|+. .+... ++..+++..+..+......
T Consensus 240 SK~~~~~G~RiG~~v~~~~li~~l~~~-~~~~~~-~~~~~~Q~aa~~aL~~--~~~~~~~~~~~y~~rrd~~~~~l~~~~ 315 (402)
T PRK06107 240 SKTYAMTGWRIGYAAGPADLIAAINKL-QSQSSS-CPSSISQAAAAAALNG--DQSFVAESVKVYKQRRDYALERLNAIP 315 (402)
T ss_pred CCCCCCCCCEEEEEEECHHHHHHHHHH-HHHCCC-CCCHHHHHHHHHHHHC--CHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 345677662268998589999999999-624346-8989999999999968--847899999999999999999887579
Q ss_pred CCC---CCCCEEEEEE--C--------C---HHHHHHHHHHHHH-CCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHH
Q ss_conf 789---9897289995--8--------9---7999999999997-79189862288888887039996287899999999
Q gi|254780486|r 305 GFS---SQSHIQSIVI--G--------D---NKSCLNIAKNLQK-KGFDIRAIRPPTVPINTARLRISITLNVDEPTIVK 367 (381)
Q Consensus 305 g~~---~~s~I~~v~~--g--------d---~~~a~~~~~~L~~-~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~ 367 (381)
|+. .+... .+++ . + .....+++.+|++ .||.+.|...=- ....+||++. .++|++++
T Consensus 316 g~~~~~P~g~~-y~~~d~~~~~~~~~p~~~~~~~~~~f~~~ll~~~gV~v~PG~~FG---~~~~~Ri~fa--~~~e~L~e 389 (402)
T PRK06107 316 GLSCLVPDGAF-YLYVNCAGLIGKTTPEGKVLETDTDVVLYLLDSVGVAVVQGTAYG---LSPYFRMSIA--TSLETLEA 389 (402)
T ss_pred CCEECCCCEEE-EEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC---CCCEEEEEEC--CCHHHHHH
T ss_conf 96762798127-981305100344586656656889999999985899997785338---9982999971--99999999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999998873
Q gi|254780486|r 368 LFDILPQIISEG 379 (381)
Q Consensus 368 ~~~~l~~v~~E~ 379 (381)
.++.|++.++++
T Consensus 390 a~~Rl~~al~~l 401 (402)
T PRK06107 390 GCDRIERAVAAL 401 (402)
T ss_pred HHHHHHHHHHHC
T ss_conf 999999999964
No 164
>PRK02948 cysteine desulfurase; Provisional
Probab=99.89 E-value=5.3e-20 Score=144.85 Aligned_cols=319 Identities=15% Similarity=0.128 Sum_probs=195.3
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCC-CCCHHHHHHHHHHHHHCCCCC-EEEE-CCCCHHHHHHHHH----HCCCCCC
Q ss_conf 9889999999999863786887224436-885899999999840128885-1674-1660245655666----3168971
Q gi|254780486|r 44 SSTLLREKILSSLDSKIPIGSGGSRLLC-GNYNQHLELEEEAADFFGFEK-MLYF-GSGYAANMAILST----LPQATDL 116 (381)
Q Consensus 44 ~~p~v~~a~~~a~~~~~g~~~~~sr~~~-G~~~~~~~lE~~lA~~~g~e~-al~~-~sG~~An~~~i~~----l~~~~d~ 116 (381)
-.|++++++.+.....|+. +++.-..+ =.....++.=+++|+|+|.+. .++| ++++.+|..++.. +.+++|.
T Consensus 12 ~~~~v~~a~~~~~~~~~~N-~~s~h~~~~~a~~~~e~aR~~ia~~lga~~~~IvFTsg~Tes~nlai~~~~~~~~~~g~~ 90 (381)
T PRK02948 12 MSEEALQTYQKAASQYFGN-ESSLHDIGGTASSLLQVCRKTFAEMIGGKEQGVYFTSGGTESNYLAIQSLLNALPQNKKH 90 (381)
T ss_pred CCHHHHHHHHHHHHHHCCC-CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 9999999999999870689-851417999999999999999999809997808992887699999999999970579998
Q ss_pred CCHHHHCCHHHHHHH---HHCCCCCEEECC-----CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHH
Q ss_conf 004542026775266---640876403056-----881478997643100024786079714621576613468999998
Q gi|254780486|r 117 IVYDKLVHASIREGI---NSGKAQAIAIPH-----NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKI 188 (381)
Q Consensus 117 ii~D~~~HaSi~~g~---~ls~a~~~~f~H-----nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l 188 (381)
|+.-..-|.|+..-. +-.+.++...+- -|+++|++.|.. .+.+|++-.+-+..|.+.|+++|.++
T Consensus 91 ii~s~~EH~sv~~~~~~l~~~G~~v~~i~~d~~G~id~~~l~~~l~~-------~t~LV~v~~asN~tG~i~pi~~I~~~ 163 (381)
T PRK02948 91 IITTPMEHASIHSYFQSLESQGYTVTEIPVDKSGLIRLVDLERAITE-------DTVLASIQHANSEIGTIQPIAEIGAL 163 (381)
T ss_pred EEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCC-------CCEEEEEECEEECCCCCCCHHHHHHH
T ss_conf 99746422007899999997299899967788887699999975689-------94699997502068647758899999
Q ss_pred HHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE-EEEECCCCCC-CCCCCCCCC--EEC-CCC
Q ss_conf 63136089861311222347776401100001346521001346565302-6752451001-000012110--000-135
Q gi|254780486|r 189 ANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG-ALVGSNKIIY-DYLINYAKP--FIY-TTS 263 (381)
Q Consensus 189 ~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G-G~i~~~~~ii-~~l~~~~~~--~if-st~ 263 (381)
|++||++++||-+|++|-+ + .+ ....+.++++-|--|-+|-.| |++..++++. +-+. .+.. .-| ++.
T Consensus 164 a~~~g~~~~vDa~Q~~g~~-~-----id-v~~l~~D~~~fS~HK~~GP~GiG~L~~~~~~~~~~~~-~g~~~e~~~~~GT 235 (381)
T PRK02948 164 LKKYNVLFHSDCVQTFGKL-P-----ID-VFEMGIDSLSVSAHKIYGPKGVGAVYINPQVRWKPVF-PGTSHEKGFRPGT 235 (381)
T ss_pred HHHHCCEEEEEHHHHCCCC-C-----CC-CCCCCCCEEEEEHHCCCCCCCEEEEEECCCCCCCCCC-CCCCCCCCCCCCC
T ss_conf 9870987984656614651-6-----65-3446776256200004588725999987898655566-8988789766786
Q ss_pred CCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHH-HHHHHCCCCC-----C--CCCCEEEEEECCHHHHHHHHHHHHHCC
Q ss_conf 7750257898878988627-10224789999999-9876417978-----9--989728999589799999999999779
Q gi|254780486|r 264 PSPILAVVACEALKLIKRK-PALHKSLLQLINIT-DKIANKKIGF-----S--SQSHIQSIVIGDNKSCLNIAKNLQKKG 334 (381)
Q Consensus 264 l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~-~~~~~~~~g~-----~--~~s~I~~v~~gd~~~a~~~~~~L~~~G 334 (381)
++.+.+++..++++.+.+. +...++..++.+++ +++.....+. + ...+|+.+.+.+ .....+...|-++|
T Consensus 236 ~nv~gi~~l~~A~~~~~~~~~~~~~~~~~L~~~l~~~l~~~~~~~~~~~~~~~~~p~i~~~~~~~-~~~~~~~~~l~~~g 314 (381)
T PRK02948 236 VNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLPLPIEVEGHSTSCLPHIIGVTIKG-FEGQYTMLECNRRG 314 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCEEEEECCC-CCHHHHHHHCCCCC
T ss_conf 75999999999999998649999999999999999998547997465688634568678873388-68899998542168
Q ss_pred EEEEEECC-------CC-----C--C--CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 18986228-------88-----8--8--887039996287899999999999999998873
Q gi|254780486|r 335 FDIRAIRP-------PT-----V--P--INTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 335 i~v~~i~~-------Pt-----V--p--~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
|.|+.-.. |. . + ...+-+|+++...+|+||||+++++|+++.++.
T Consensus 315 I~v~~GsaCa~~~~~~s~~l~a~g~~~~~a~~~vRvS~g~ynT~eeId~~i~al~~i~~~f 375 (381)
T PRK02948 315 IAISTGSACQVGKQEPSKTMLAIGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGNQF 375 (381)
T ss_pred CEEECCHHHCCCCCCCCHHHHHCCCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 1897804527898870089997599878809259997479999999999999999999998
No 165
>PRK07324 transaminase; Validated
Probab=99.88 E-value=2.7e-20 Score=146.70 Aligned_cols=343 Identities=18% Similarity=0.190 Sum_probs=199.3
Q ss_pred HHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 99999999975983999289768980344656677988999999999986378688722443688589999999984012
Q gi|254780486|r 9 YEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF 88 (381)
Q Consensus 9 ~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~ 88 (381)
.|+-+...+.+-.|..- ...+-.++=.+-|.|+..+ .+++.+++. .-.++.+.++ |. .+|-++||+++
T Consensus 8 ~e~~~~~~e~~~~~~~~--~s~~~~~~~~~l~~l~~~~--~~~~~~~l~-~~~l~Y~~~~---G~----~~LR~~Ia~~y 75 (373)
T PRK07324 8 VEEWLNVYEKSATYDIA--ESCIDSLTLEELLALSGKN--GEAFYSQLG-DKKLTYGWIE---GS----PEFKEAVASLY 75 (373)
T ss_pred HHHHHHHHHCCCEEECC--CCCCCCCCHHHHHHHCCCC--HHHHHHHHH-CCCCCCCCCC---CC----HHHHHHHHHHH
T ss_conf 98899986443806311--7676667799996214886--689999872-3777778888---98----99999999986
Q ss_pred ---CCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC---CC----CHHHHHHHHHHHHH
Q ss_conf ---888516741660245655666316897100454202677526664087640305---68----81478997643100
Q gi|254780486|r 89 ---GFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP---HN----NINSFAENINKWRK 158 (381)
Q Consensus 89 ---g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~---Hn----D~~~Le~~l~~~~~ 158 (381)
..|..++++.+..|+..++.++++|||.|++..=...+...-.+..++++..++ .| |+++|++.++.
T Consensus 76 ~~v~~d~IlvT~Ga~~Al~l~~~~l~~pGD~Viv~~P~Y~~~~~~~~~~G~~v~~~~l~~~~~~~~Dl~~l~~~i~~--- 152 (373)
T PRK07324 76 QNVKPDNILQTNGATGANHLVLYALIEPGDHVISVYPTYQQLYDIPESLGAEVDYWKLREENGWLPDLDELKRLVRP--- 152 (373)
T ss_pred CCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCC---
T ss_conf 69986788986878999999999975999989988998577999999839876540767225988799999961887---
Q ss_pred CCCCCCCEEEECCCCCCCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCC
Q ss_conf 0247860797146215766134---6899999863136089861311222347776401100001346521001346565
Q gi|254780486|r 159 SGGKGFPWIVVESIYSMDGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALG 235 (381)
Q Consensus 159 ~~~~~~~~vv~egv~Sm~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g 235 (381)
+.+.+++...-.. .|.+- .+++|+++|++||++++.||+|.- +...|. .....+..++.|.++||||+||
T Consensus 153 ---~tkliil~nP~NP-TG~v~s~e~l~~l~~la~~~~i~iisDEiY~~--l~~~~~-~~s~~~~~~~~I~~~S~SK~~~ 225 (373)
T PRK07324 153 ---NTKLICINNANNP-TGALMDRAFLEEIVEIAKSVDAYVLSDEVYRP--LDEEGS-FPSIADLYEKGISTNSLSKTYS 225 (373)
T ss_pred ---CCEEEEECCCCCC-CCCCCCHHHHHHHHHHHHCCCEEEEECCCCCC--CCCCCC-CCHHHHHHHCEEEECCCCCCCC
T ss_conf ---8769997999798-89778899999999875417859981255422--357975-0105657557589715411256
Q ss_pred CEE---EEEECCCCCCCCCCCCCCCEECCC-CCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCC--CCC--
Q ss_conf 302---675245100100001211000013-57750257898878988627-102247899999999876417--978--
Q gi|254780486|r 236 SSG---ALVGSNKIIYDYLINYAKPFIYTT-SPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKK--IGF-- 306 (381)
Q Consensus 236 ~~G---G~i~~~~~ii~~l~~~~~~~ifst-~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~--~g~-- 306 (381)
..| ||+++++++++.++... .+ ++ +.++..-.++..+++..+.- ...++.++++........... ..+
T Consensus 226 l~GlRiGwiv~~~~li~~~~~~~-~~--~~i~~~~~~~~~a~~al~~~~~~l~~~~~~~~~n~~~l~~~l~~~~~~~~~~ 302 (373)
T PRK07324 226 LPGIRVGWIATNEEVIDIFRKYR-DY--TMICAGVFDDMLASLALEHRDAILERNRKIVRTNLAILDEWVAKEPRVSYVK 302 (373)
T ss_pred CCCCEEEEEECCHHHHHHHHHHH-HH--CCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEC
T ss_conf 77743799966999999999998-65--3556656999999999968399999999999999999999997388853763
Q ss_pred CCCCCEEEEEECCHHHHHHHHHHHHH-CCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99897289995897999999999997-7918986228888888703999628789999999999999999887387
Q gi|254780486|r 307 SSQSHIQSIVIGDNKSCLNIAKNLQK-KGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGNS 381 (381)
Q Consensus 307 ~~~s~I~~v~~gd~~~a~~~~~~L~~-~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~s 381 (381)
+..+....+.+..+....+++.+|++ +||.+.|...=-. ...+|++... +++++++.++.|.++++|+|+
T Consensus 303 P~gg~~~~~~~~~~~~~~~~~~~ll~~~gV~v~PG~~F~~---~g~~Ri~fa~--~~~~l~egl~RL~~~l~~l~~ 373 (373)
T PRK07324 303 PKAVSTSFIKLDVDMDSEEFCEKLLKETGVLLVPGNRFDL---EGHVRIGYCC--DTKTLKKGLKKLSEFLRKLDS 373 (373)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCCCCC---CCEEEEEEEC--CHHHHHHHHHHHHHHHHHHCC
T ss_conf 5861479987899989999999999968999974886589---9949999819--899999999999999997369
No 166
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.88 E-value=1.7e-22 Score=160.32 Aligned_cols=160 Identities=28% Similarity=0.323 Sum_probs=124.7
Q ss_pred HHHHHHHHHHHC--CCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHH-HHHHCCCCCEEECCCCHH----HH
Q ss_conf 999999984012--88851674166024565566631689710045420267752-666408764030568814----78
Q gi|254780486|r 77 HLELEEEAADFF--GFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIRE-GINSGKAQAIAIPHNNIN----SF 149 (381)
Q Consensus 77 ~~~lE~~lA~~~--g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~-g~~ls~a~~~~f~HnD~~----~L 149 (381)
.+|+|+++|+|+ +.|++++++||+.||.+++.++.+++|.|+++...|.|... .+...+++.+.++.++.. ++
T Consensus 2 ~~e~e~~la~~~~~~~~~~i~~~sgt~A~~~~~~~l~~~gd~vi~~~~~~~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 81 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYWVAAELAGAKPVPVPVDDAGYGGLDV 81 (170)
T ss_pred HHHHHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCCCH
T ss_conf 89999999998489989899956699999999999727999999826843756899998659877872347787554689
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCC
Q ss_conf 99764310002478607971462157661346899999863136089861311222347776401100001346521001
Q gi|254780486|r 150 AENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHS 229 (381)
Q Consensus 150 e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~T 229 (381)
+...++ ...+...+|+++.+++++|.+.|+++|.+||++||+++++|+||++|.++..+.- .....-++++.|
T Consensus 82 ~~~~~~---~~~~~~~~i~~~~~~~~~g~~~~l~~I~~la~~~gi~livD~a~~~g~~~~~~~~----~~~~~~D~~~~s 154 (170)
T cd01494 82 AILEEL---KAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVL----IPEGGADVVTFS 154 (170)
T ss_pred HHHHHH---HCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHCCCEEEEECCCHHCCCCCCCCC----CCCCCCEEEEEC
T ss_conf 999998---5599963688774014787320199997356207969999468432160666667----777898599989
Q ss_pred CCCCCCCE-EEEEEC
Q ss_conf 34656530-267524
Q gi|254780486|r 230 CSKALGSS-GALVGS 243 (381)
Q Consensus 230 lsKa~g~~-GG~i~~ 243 (381)
+.|.+|.. ||++..
T Consensus 155 ~hK~lg~~g~g~l~~ 169 (170)
T cd01494 155 LHKNLGGEGGGVVIV 169 (170)
T ss_pred CCCCCCCCCEEEEEE
T ss_conf 866678985799998
No 167
>PRK06507 consensus
Probab=99.88 E-value=2.7e-19 Score=140.45 Aligned_cols=344 Identities=10% Similarity=0.030 Sum_probs=198.0
Q ss_pred HHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 99999999975983999289768980344656677988999999999986378688722443688589999999984012
Q gi|254780486|r 9 YEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF 88 (381)
Q Consensus 9 ~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~ 88 (381)
+.++-.++++ .|+++++|+--|= .+...|.+++++.+++.. --++.+.+ .|...+.+++-+.+.+.+
T Consensus 19 i~~~a~~l~~--------~G~~vi~L~iG~p-d~~~p~~i~~a~~~~~~~-~~~~Y~~~---~G~~~LReaia~~~~~~~ 85 (400)
T PRK06507 19 MTQRARELRA--------EGIKVVSLSSGEP-DFPTPAHAIEAAHAAALA-GDTKYPPM---DGTPALKAAIQRKFKREN 85 (400)
T ss_pred HHHHHHHHHH--------CCCCEEECCCCCC-CCCCCHHHHHHHHHHHHC-CCCCCCCC---CCHHHHHHHHHHHHHHHH
T ss_conf 9999999997--------7997377789388-998889999999999745-89987998---784999999999999984
Q ss_pred C----CCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC-------CCHHHHHHHHHHHH
Q ss_conf 8----885167416602456556663168971004542026775266640876403056-------88147899764310
Q gi|254780486|r 89 G----FEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH-------NNINSFAENINKWR 157 (381)
Q Consensus 89 g----~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H-------nD~~~Le~~l~~~~ 157 (381)
| .++.++.+.+-.|-..++.++++|||.|++-.=.-.+-...+++.+++.+.++- -|+++|++.+.
T Consensus 86 g~~~~p~~I~vt~G~~~al~~~~~~l~~pGD~Vli~~P~y~~y~~~~~~~g~~~v~v~l~~~~g~~~d~~~le~~~~--- 162 (400)
T PRK06507 86 NLDYDPSEIVVSNGGKQVIFNAMMATCNPGDEVVIPAPSWVSYADIVKLAGGVPVAVPCREETGFKLRPEDLEAAIT--- 162 (400)
T ss_pred CCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCC---
T ss_conf 89998243898178299999999996699998999058774057999981991599756701176416999997467---
Q ss_pred HCCCCCCCEEEECCCCCCCCCHH---HHHHHHHHHHHC-CEEEEECCCCCCCCCCC-CCCEEEEEH-HCCCCCCCCCCCC
Q ss_conf 00247860797146215766134---689999986313-60898613112223477-764011000-0134652100134
Q gi|254780486|r 158 KSGGKGFPWIVVESIYSMDGDKA---PLDDLVKIANDY-DGFIVVDEAHATGVCGP-LGKGLTHII-EERNNVIVMHSCS 231 (381)
Q Consensus 158 ~~~~~~~~~vv~egv~Sm~G~~a---pL~~i~~l~~~y-~~~LivDEah~~Gv~G~-~G~G~~~~~-~~~~~~iv~~Tls 231 (381)
++.+.+|+.-.=.. .|.+. .|.+|.++|++| +++++.||+|+--++.. .-..+.... +..+++|.+.|||
T Consensus 163 ---~~tk~iil~~P~NP-TG~v~s~~~l~~i~~~a~~~~~v~visDEiY~~l~~~~~~~~s~~~~~p~~~~~~i~~~S~S 238 (400)
T PRK06507 163 ---PRTKWLFLNFPNNP-TGAACTRAEMAAIAEVMLRHPHVWIMTDDIYEHLVYDGFEFCTIAEVEPRLYDRVLTMNGVS 238 (400)
T ss_pred ---CCCEEEEECCCCCH-HHHHHHHHHHHHHHHHHHHCCCCEECCCCCHHHHEECCCCCCCHHHHCCCCCCCEEEEECCC
T ss_conf ---56649997499293-12886477999999866531682140566424412089778878885856455358983354
Q ss_pred CCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 6565302---67524510010000121100001357750257898878988627-1022478999999998764179789
Q gi|254780486|r 232 KALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKKIGFS 307 (381)
Q Consensus 232 Ka~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~~g~~ 307 (381)
|+|+..| ||+.+++++++.+... ..+..+ ..+.+...++.++++--++- .++++.++++..+..+......++.
T Consensus 239 K~~~~~G~RiG~~~~~~~~i~~~~~~-~~~~~~-~~~~~~Q~aa~~al~~~~~~~~~~~~~~~~rrd~l~~~L~~~~g~~ 316 (400)
T PRK06507 239 KAYAMTGWRLGFCGGPKELIKAMSNV-NGQATG-GIATLAQAAAAAALDGPQDLLKERAAIYRERRDFVVEKLAEIPGLT 316 (400)
T ss_pred CCCCCCCCCEEEEECCHHHHHHHHHH-HHHCCC-CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 44467651048774879999999999-865247-6543999999999849777778999999999999999998478995
Q ss_pred ---CCCC-EEEEEECC-----------HHHHHHHHHHHH-HCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf ---9897-28999589-----------799999999999-7791898622888888870399962878999999999999
Q gi|254780486|r 308 ---SQSH-IQSIVIGD-----------NKSCLNIAKNLQ-KKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDI 371 (381)
Q Consensus 308 ---~~s~-I~~v~~gd-----------~~~a~~~~~~L~-~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~ 371 (381)
+++. ...+-+.+ .....+++.+|+ ++||.+.|...=- + ..-+||+.. .++++|++.++.
T Consensus 317 ~~~P~G~fy~~~~~~~~~~~~~~~~~~~~~d~~f~~~Ll~e~gV~v~PG~~FG-~--~~~vRis~a--~~~~~l~eal~R 391 (400)
T PRK06507 317 CHKPEGAFYIYPNIAGLIGKTSKGGRRLETDEDFVMALLEEQHVATVQGAAYG-M--SPYFRLSYA--TDMESLGEGCAR 391 (400)
T ss_pred CCCCCEEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCC-C--CCEEEEEEC--CCHHHHHHHHHH
T ss_conf 67898147997754010233453456678889999999985899997787448-9--983999964--999999999999
Q ss_pred HHHHHHHH
Q ss_conf 99998873
Q gi|254780486|r 372 LPQIISEG 379 (381)
Q Consensus 372 l~~v~~E~ 379 (381)
|.+.++++
T Consensus 392 l~~f~~~l 399 (400)
T PRK06507 392 IAQFCEDL 399 (400)
T ss_pred HHHHHHHC
T ss_conf 99999964
No 168
>PRK08960 hypothetical protein; Provisional
Probab=99.88 E-value=1.6e-19 Score=141.91 Aligned_cols=330 Identities=14% Similarity=0.097 Sum_probs=187.8
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC----CCCEEEECCCCHH
Q ss_conf 897689803446566779889999999999863786887224436885899999999840128----8851674166024
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG----FEKMLYFGSGYAA 102 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g----~e~al~~~sG~~A 102 (381)
.|+++++|+--+ =.|...+.+++++.++++. --++.+.+. |..++-+++-+.+.+.+| .++.++++.+-.|
T Consensus 30 ~G~~vi~l~~G~-pdf~~p~~i~~a~~~a~~~-~~~~Y~~~~---G~~~LReaia~~~~~~~g~~~~~d~I~vt~G~~~a 104 (387)
T PRK08960 30 AGHDVIHLEIGE-PDFTTAAPIVAAGQAALAA-GHTRYTAAR---GLPALREAIAGFYAQRYGLDVDPERILVTPGGSGA 104 (387)
T ss_pred CCCCEEECCCCC-CCCCCCHHHHHHHHHHHHC-CCCCCCCCC---CHHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHH
T ss_conf 799807889948-9998899999999999853-899889987---72999999999999985899984328980866999
Q ss_pred HHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC-------CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
Q ss_conf 56556663168971004542026775266640876403056-------88147899764310002478607971462157
Q gi|254780486|r 103 NMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH-------NNINSFAENINKWRKSGGKGFPWIVVESIYSM 175 (381)
Q Consensus 103 n~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm 175 (381)
-..++.++++|||.|++..=.-.+....+++.+++.+.++- -|.+.+++.+.. +.+.+++.-.-..
T Consensus 105 l~~~~~~l~~pGD~Vlv~~P~Yp~~~~~~~~~~~~~~~vp~~~~~~~~~~~~~le~~~~~------~~~~iil~nP~NP- 177 (387)
T PRK08960 105 LLLASSLLVDPGKHWLLADPGYPCNRHFLRLVEGAAQLVPVGPDTRYQLTPALVERHWDS------DSVGALVASPANP- 177 (387)
T ss_pred HHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHCCC------CCEEEEECCCCCC-
T ss_conf 999999956999879981787655289999853744999757544778899999972787------8729997689898-
Q ss_pred CCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCC
Q ss_conf 66134---6899999863136089861311222347776401100001346521001346565302---67524510010
Q gi|254780486|r 176 DGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYD 249 (381)
Q Consensus 176 ~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~ 249 (381)
.|.+. .|++|.++|++||+++|.||+|+--+++..- .......++.|+++||||+|+..| ||+++++++++
T Consensus 178 TG~v~s~~~l~~l~~~a~~~~~~vI~DEiY~~l~~~~~~---~s~~~~~~~~i~i~S~SK~~~~~G~RiG~~v~p~~~i~ 254 (387)
T PRK08960 178 TGTLLSRDELAALSQALKARGGHLVVDEIYHGLTYGVDA---ASVLEVDDSAFVLNSFSKYFGMTGWRLGWLVAPPAAVP 254 (387)
T ss_pred CCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCC---CCCCCCCCCEEEEEECCCCCCCCCCEEEEEEECHHHHH
T ss_conf 863146899999999876239779984461441258986---53113678779995064325577630589998899999
Q ss_pred CCCCCCCCEECCCCCCCCHHHHHHHHHHHHHH--CCCHHHHHHHHHHHHHHHHHCCCCCC----CCCC-EEEEEECC-HH
Q ss_conf 00012110000135775025789887898862--71022478999999998764179789----9897-28999589-79
Q gi|254780486|r 250 YLINYAKPFIYTTSPSPILAVVACEALKLIKR--KPALHKSLLQLINITDKIANKKIGFS----SQSH-IQSIVIGD-NK 321 (381)
Q Consensus 250 ~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~--~~~~~~~l~~~~~~~~~~~~~~~g~~----~~s~-I~~v~~gd-~~ 321 (381)
.+..... .++..+..| ...++.++++.-.. -..+++.++++..+.... ...+++. +++. .+.+-+.. ..
T Consensus 255 ~~~~~~~-~~~~~~~~~-~Q~aa~~al~~~~~~~~~~~~~~~~~rrd~l~~~-l~~~~~~~~~~P~G~~y~w~~~~~~~~ 331 (387)
T PRK08960 255 ELEKLAQ-NLYISASSM-AQHAALACFEPETIAILEARRAEFQRRRDFLLPA-LRELGFGIAVEPQGAFYLYADISAFGG 331 (387)
T ss_pred HHHHHHH-HCCCCCCCH-HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-HHHCCCCCCCCCCEEEEEEEECCCCCC
T ss_conf 9999998-543779879-9999999962155999999999999999999999-997599604589866699788888899
Q ss_pred HHHHHHHHHH-HCCEEEEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9999999999-7791898622-888888870399962878999999999999999988
Q gi|254780486|r 322 SCLNIAKNLQ-KKGFDIRAIR-PPTVPINTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 322 ~a~~~~~~L~-~~Gi~v~~i~-~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
...+++++|+ ++||.+.|.. |- ...+...+|++.. .+++++++.++.|.+.++
T Consensus 332 d~~~~~~~ll~~~gV~v~PG~~Fg-~~~~~~~~Rls~~--~~~~~l~eal~RL~~~Lk 386 (387)
T PRK08960 332 DAFAFCRHFLETEHVAFTPGLDFG-RHQAGHHVRFAYT--QSLPRLQEAVERIARGLR 386 (387)
T ss_pred CHHHHHHHHHHHCCEEEECCHHHC-CCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHC
T ss_conf 999999999986999997472208-9999998999976--999999999999999966
No 169
>PRK07337 aminotransferase; Validated
Probab=99.88 E-value=1.5e-19 Score=141.95 Aligned_cols=339 Identities=12% Similarity=0.109 Sum_probs=194.1
Q ss_pred HHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 99999999975983999289768980344656677988999999999986378688722443688589999999984012
Q gi|254780486|r 9 YEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF 88 (381)
Q Consensus 9 ~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~ 88 (381)
+.++..++++ .|+++++|+.-|= .+..-|.+++++.++++ .--++.+.+ .|..++.+++-+.+.+.+
T Consensus 18 i~~~a~~~~~--------~G~dvi~l~~g~p-df~~p~~i~~a~~~~~~-~~~~~Y~~~---~G~~~lreaia~~~~~~~ 84 (388)
T PRK07337 18 LAKEAQALER--------AGRDIIHMGIGEP-DFTAPEPVVEAAARALR-RGVTQYTSA---LGLAPLREAIAAHYARRF 84 (388)
T ss_pred HHHHHHHHHH--------CCCCEEECCCCCC-CCCCCHHHHHHHHHHHH-CCCCCCCCC---CCCHHHHHHHHHHHHHHH
T ss_conf 9999999997--------7998089979989-99879999999999984-699988999---887999999999999986
Q ss_pred C----CCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC-------CCHHHHHHHHHHHH
Q ss_conf 8----885167416602456556663168971004542026775266640876403056-------88147899764310
Q gi|254780486|r 89 G----FEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH-------NNINSFAENINKWR 157 (381)
Q Consensus 89 g----~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H-------nD~~~Le~~l~~~~ 157 (381)
| .|..++.+.+..|...++.++++|||.|++..=.-.+....+++.+++.+.++- -|++++++.+..
T Consensus 85 g~~i~pe~I~it~G~~~al~~~~~~l~~pGD~Vlv~~P~Yp~~~~~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~-- 162 (388)
T PRK07337 85 GLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNRHFVAAAEGRPVLVPSGPAERFQLTADDVRTHWGE-- 162 (388)
T ss_pred CCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCC--
T ss_conf 899966887984875999999999966999989985887365999999739889994037100677897999985786--
Q ss_pred HCCCCCCCEEEECCCCCCCCCH---HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCC
Q ss_conf 0024786079714621576613---4689999986313608986131122234777640110000134652100134656
Q gi|254780486|r 158 KSGGKGFPWIVVESIYSMDGDK---APLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKAL 234 (381)
Q Consensus 158 ~~~~~~~~~vv~egv~Sm~G~~---apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~ 234 (381)
+.+.+++.-.=.. .|.+ ..|++|.++|++|+++++.||+|+.-++..... ......+++|+++||||+|
T Consensus 163 ----~tk~iil~nP~NP-tG~v~s~~el~~i~~~a~~~~~~vIsDEiY~~l~~~~~~~---~~~~~~~~~i~~~S~SK~~ 234 (388)
T PRK07337 163 ----RTRGVLLASPSNP-TGTSIEPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPV---SALSLGDDVITINSFSKYF 234 (388)
T ss_pred ----CCEEEEECCCCCC-CCEEEEHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCC---CCCCCCCCEEEECCCCCCC
T ss_conf ----5539997899798-8856267774335544314580884576410012489986---7100578579982665455
Q ss_pred CCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHH--HHHHCCCHHHHHHHHHHHHHHHHHCCCCCC--
Q ss_conf 5302---675245100100001211000013577502578988789--886271022478999999998764179789--
Q gi|254780486|r 235 GSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALK--LIKRKPALHKSLLQLINITDKIANKKIGFS-- 307 (381)
Q Consensus 235 g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~--~l~~~~~~~~~l~~~~~~~~~~~~~~~g~~-- 307 (381)
+..| ||+++++++++.+..... .++.. .|.+...++.++++ .+..-..+++.++++..+... ....+++.
T Consensus 235 ~~~G~RiG~~i~p~~li~~~~~~~~-~~~~~-~~~~~q~aa~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~l~~~~~~~~ 311 (388)
T PRK07337 235 NMTGWRLGWLVVPPALVGTFEKLAQ-NLFIC-ASALAQHAALACFEPDTLAIYERRRAEFKRRRDFIVP-ALESLGFKVP 311 (388)
T ss_pred CCCCCCEEEEEECHHHHHHHHHHHH-HCCCC-CCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCC
T ss_conf 7866156999988999999999998-54588-6699999999984822479999999999999999999-9997599646
Q ss_pred --CCCCEEEEEE-------CCHHHHHHHHHHHH-HCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf --9897289995-------89799999999999-779189862288888887039996287899999999999999998
Q gi|254780486|r 308 --SQSHIQSIVI-------GDNKSCLNIAKNLQ-KKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 308 --~~s~I~~v~~-------gd~~~a~~~~~~L~-~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
.++. ..+++ .......+++++|+ +.||.+.|...=-...+...+|++.. .++++|++.++.|++++
T Consensus 312 ~~P~G~-~~~w~d~~~~~~~~~~d~~~~~~~ll~e~gV~v~PG~~Fg~~~~~~~iRl~~a--~~~~~l~eal~RL~~~l 387 (388)
T PRK07337 312 VMPDGA-FYVYADCGGVAHPAAGDSAALTFAMLHDAGVVLVPGMDFGPHAPRDYIRLSYA--TSYSRLEEAVARLGKLF 387 (388)
T ss_pred CCCCEE-EEEEEECHHHCCCCCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHH
T ss_conf 578826-69947864216999999999999999859999977622189999997999971--99999999999999970
No 170
>PRK08363 alanine aminotransferase; Validated
Probab=99.88 E-value=6e-20 Score=144.50 Aligned_cols=345 Identities=13% Similarity=0.056 Sum_probs=193.7
Q ss_pred HHHHHHHHHHCCCEEEECCCCEEEECCCCCCC--CCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 99999999975983999289768980344656--6779889999999999863786887224436885899999999840
Q gi|254780486|r 9 YEERLQKIKSKGRHRQLLRRQDIWDFTSHDYL--ALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAAD 86 (381)
Q Consensus 9 ~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYL--Gl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~ 86 (381)
+-++.+++++ .|+++++|+--|-- +|...+.+++++.+++.. -.++.+.+ .|..++-+.+-+...+
T Consensus 18 i~~~a~~l~~--------~G~~vi~l~iG~P~~~df~~p~~i~~a~~~a~~~-~~~~Y~~~---~G~~~LR~aia~~~~~ 85 (398)
T PRK08363 18 VVLPARELEK--------KGIKVIRLNIGDPVKFDFQPPEHMKEAYCRAIKE-GHNYYGPS---EGLPELREAIVKREKR 85 (398)
T ss_pred HHHHHHHHHH--------CCCCEEECCCCCCCCCCCCCCHHHHHHHHHHHHC-CCCCCCCC---CCHHHHHHHHHHHHHH
T ss_conf 9999999997--------7997068569899978999899999999999971-89988998---8759999999999999
Q ss_pred HCC----CCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC-------CCHHHHHHHHHH
Q ss_conf 128----885167416602456556663168971004542026775266640876403056-------881478997643
Q gi|254780486|r 87 FFG----FEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH-------NNINSFAENINK 155 (381)
Q Consensus 87 ~~g----~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H-------nD~~~Le~~l~~ 155 (381)
.+| .|+.++++.+-.|...++.+|++|||.|++-.=...+....+++.+++.+.++. -|+++|++.+..
T Consensus 86 ~~g~~~~pd~I~vt~G~~~al~~~~~~l~~pGD~Vlvp~P~Y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~l~~~i~~ 165 (398)
T PRK08363 86 KNGVDITPDDVRVTNAVTEALQMLFGALLDPGDEILIPGPSYPPYTGLVKFYGGVPVEYRTIEEEGWQPDIDDIRKKITE 165 (398)
T ss_pred HHCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHCCC
T ss_conf 86899866888985778999999999966998989986675674389999839978436886214896899999975311
Q ss_pred HHHCCCCCCCEEEECCCCCCCCCHHH---HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCC
Q ss_conf 10002478607971462157661346---899999863136089861311222347776401100001346521001346
Q gi|254780486|r 156 WRKSGGKGFPWIVVESIYSMDGDKAP---LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSK 232 (381)
Q Consensus 156 ~~~~~~~~~~~vv~egv~Sm~G~~ap---L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsK 232 (381)
+.+.+++.-.-.. .|.+.+ |++|+++|++||++++.||+|+.-++...-..... +...+++|+++||||
T Consensus 166 ------~tk~i~l~nP~NP-TG~v~s~~~l~~i~~la~~~~~~vIsDEiY~~l~~~~~~~s~~~-~~~~~~vi~i~s~SK 237 (398)
T PRK08363 166 ------KTKAIAVINPNNP-TGALYDKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHVSPGS-LTKDVPVIVMNGLSK 237 (398)
T ss_pred ------CCEEEEECCCCCC-CCCCCCHHHHHHHHHHHHHCCCEEECHHHHHHHCCCCCCCCHHH-HCCCCCEEEEECCCC
T ss_conf ------3729998799998-88865488999999998755964761334666416998779778-286778899825503
Q ss_pred CCCCEE---EEEE--CCCCCCCCCCCCCCCE--ECCCCCCCCHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHCCC
Q ss_conf 565302---6752--4510010000121100--00135775025789887898862-71022478999999998764179
Q gi|254780486|r 233 ALGSSG---ALVG--SNKIIYDYLINYAKPF--IYTTSPSPILAVVACEALKLIKR-KPALHKSLLQLINITDKIANKKI 304 (381)
Q Consensus 233 a~g~~G---G~i~--~~~~ii~~l~~~~~~~--ifst~l~P~~~aaa~aal~~l~~-~~~~~~~l~~~~~~~~~~~~~~~ 304 (381)
.|+..| ||++ ++...++.+++....+ +...+..| ...++.++++--.+ -++.++.++++..+..+......
T Consensus 238 ~~~~~G~RiG~i~~~~p~~~~~~~~~~~~~~~~~~~~~~~~-~Q~a~~~al~~~~~~~~~~~~~~~~rrd~~~~~L~~~~ 316 (398)
T PRK08363 238 VYFATGWRLGYIYFVDPEGKLDEVREALDKLARIRLCPNTP-AQFAAIAGLTGPMDYLEEYMKKLKERRDYIYKRLNEIP 316 (398)
T ss_pred CCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHCCCCCCHH-HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 04785613699997583899999999999985506477739-99999999866877899999999999999999997179
Q ss_pred CCCCCCC--EEEEE--ECC--HHHHHHHHHHHH-HCCEEEEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 7899897--28999--589--799999999999-7791898622-88888887039996287899999999999999998
Q gi|254780486|r 305 GFSSQSH--IQSIV--IGD--NKSCLNIAKNLQ-KKGFDIRAIR-PPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 305 g~~~~s~--I~~v~--~gd--~~~a~~~~~~L~-~~Gi~v~~i~-~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
++....| -..++ +.+ .....+++.+|+ +.||.+.|.. | -+.+...+|++.. .+++++++.++.|++.+
T Consensus 317 g~~~~~P~G~~y~~~~l~~~~~~~~~ef~~~ll~e~gV~v~PG~~F--g~~g~g~vRlsf~--~~~e~l~eal~Rl~~~l 392 (398)
T PRK08363 317 GISTTKPQGAFYIFPRIEEGPWKDDKEFVLDLLHEAHVLFVHGSGF--GEYGAGHFRLVFL--PPVEILEEAMDRFEEFM 392 (398)
T ss_pred CCEECCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEECCHHH--CCCCCCEEEEEEE--CCHHHHHHHHHHHHHHH
T ss_conf 9575588878898378788899999999999998599999896432--8899986999983--89999999999999999
Q ss_pred HH
Q ss_conf 87
Q gi|254780486|r 377 SE 378 (381)
Q Consensus 377 ~E 378 (381)
+|
T Consensus 393 ~~ 394 (398)
T PRK08363 393 RE 394 (398)
T ss_pred HH
T ss_conf 99
No 171
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=2.2e-20 Score=147.21 Aligned_cols=331 Identities=16% Similarity=0.181 Sum_probs=190.7
Q ss_pred HHHHHHHHHHHHHCCCEEEE-CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 78999999999975983999-28976898034465667798899999999998637868872244368858999999998
Q gi|254780486|r 6 MSFYEERLQKIKSKGRHRQL-LRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEA 84 (381)
Q Consensus 6 ~~~~~~~l~~~~~~g~~~~~-~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~l 84 (381)
++++...+..++.=..-+.. .+|.=.||.-=|-| |. |. ....++ ++|+- +...+|=++|
T Consensus 7 ~~l~R~~i~~l~~Y~~~~~~~~~~~ikL~~NEnp~-~~---p~---~~~~~~-~RYPD------------~~~~~Lr~~l 66 (362)
T PRK04781 7 LDLVREDLRAFAGYSSARTSALQGDVWLNANESAW-GN---PA---DPDAST-RRYPD------------PQPKGLRSAL 66 (362)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCC-CC---CH---HHHHHH-CCCCC------------CCHHHHHHHH
T ss_conf 98746886169998998777899998977989999-98---44---442775-47989------------9889999999
Q ss_pred HHHCCCC-CEEEECCCCHHHH-HHHHHHCCCC-CCCCHHHHCCHHHHH-HHHHCCCCCEEECCCC----H-HHHHHHHHH
Q ss_conf 4012888-5167416602456-5566631689-710045420267752-6664087640305688----1-478997643
Q gi|254780486|r 85 ADFFGFE-KMLYFGSGYAANM-AILSTLPQAT-DLIVYDKLVHASIRE-GINSGKAQAIAIPHNN----I-NSFAENINK 155 (381)
Q Consensus 85 A~~~g~e-~al~~~sG~~An~-~~i~~l~~~~-d~ii~D~~~HaSi~~-g~~ls~a~~~~f~HnD----~-~~Le~~l~~ 155 (381)
|+++|.+ +.+++..|-.--+ .++.+++.++ |.|+.=.-. .|++. .+++.+++++.++-.| . -|++..+..
T Consensus 67 A~~~gv~~~~I~~GnGSdE~I~ll~~a~~~pg~d~vl~~~Pt-F~~Y~~~a~~~g~~~~~vpl~~~~~~f~~d~~~~~~~ 145 (362)
T PRK04781 67 AALYGCAPEQLLIGRGSDEAIDLLVRGLCVPERDAVLVTPPV-FGMYAVCARLQNAPLVEVPLVDGADGFHADVPAIVAA 145 (362)
T ss_pred HHHHCCCHHHEEEECCHHHHHHHHHHHHHCCCCCEEEECCCC-HHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHHH
T ss_conf 998686955799836789999999999955898548847974-6899999998398799995755512467799999988
Q ss_pred HHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHC--CEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCC
Q ss_conf 1000247860797146215766134689999986313--60898613112223477764011000013465210013465
Q gi|254780486|r 156 WRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDY--DGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKA 233 (381)
Q Consensus 156 ~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y--~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa 233 (381)
... .+.+ +|++-.=..=+|...+..+|.++++.. +++++||||+.- +.+. ..........+++|++.||||+
T Consensus 146 ~~~--~~~k-lv~l~nPNNPTG~~~~~~~l~~~~~~~~~~~lvvvDEAY~e--F~~~-~s~~~l~~~~~NliVlRTfSK~ 219 (362)
T PRK04781 146 ALA--SNAK-LVFLCSPSNPAGSAIALDQIETALQALQGKALVVVDEAYGE--FSDV-PSAVGLLARYDNLAVLRTLSKA 219 (362)
T ss_pred HHC--CCCC-EEEECCCCCCCCCCCCHHHHHHHHHHCCCCCEEEEECHHHH--HCCC-CCHHHHHHCCCCEEEEECHHHH
T ss_conf 526--7988-89986898973556798999999975799808998341655--2578-4344576517854533140587
Q ss_pred CCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH----HHHHHC-CC-
Q ss_conf 65302---6752451001000012110000135775025789887898862710224789999999----987641-79-
Q gi|254780486|r 234 LGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINIT----DKIANK-KI- 304 (381)
Q Consensus 234 ~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~----~~~~~~-~~- 304 (381)
||..| ||..+++++++.++..-.+| +.+....+++.++++.-. ....++++.+....+ ..+... ++
T Consensus 220 ygLAGlRlGy~ia~~~~i~~l~k~~~p~----~v~~~a~~~a~~al~~~~-~~~~~~~v~~i~~eR~~l~~~L~~l~g~~ 294 (362)
T PRK04781 220 HALAAARIGSLIANAELIAVLRRCQAPY----PVPTPCAAMAEQALSAPA-LAVTARRVAEVRAERERLHAALAQLPGVR 294 (362)
T ss_pred HHCCCCCEEEEECCHHHHHHHHHHCCCC----CCCHHHHHHHHHHHCCHH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 4075535044417999999999821798----875999999999960766-99999999999999999999998478985
Q ss_pred -CCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEE-CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf -789989728999589799999999999779189862-2888888870399962878999999999999999988
Q gi|254780486|r 305 -GFSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAI-RPPTVPINTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 305 -g~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i-~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
-+++.+..+-+.+++. ..+.++|+++||+|+.. .+|-. ...+||++. |+||.++++++|+++++
T Consensus 295 ~v~pS~aNFil~~~~~a---~~~~~~L~~~gIlVR~~~~~p~l---~~~lRisig---t~een~~ll~aL~~i~e 360 (362)
T PRK04781 295 QVYPSQGNFLLVRFDDA---EAAFQALLAAGVVVRDQRAVPRL---SDALRITIG---TPEQNDRVLAALQRTQE 360 (362)
T ss_pred EECCCCCEEEEEECCCH---HHHHHHHHHCCCEEEECCCCCCC---CCEEEEEEC---CHHHHHHHHHHHHHHHH
T ss_conf 56899884999877999---99999999499399707887899---997999809---99999999999999996
No 172
>PRK07682 hypothetical protein; Validated
Probab=99.88 E-value=9.8e-20 Score=143.16 Aligned_cols=334 Identities=12% Similarity=0.106 Sum_probs=193.6
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC----CCEEEECCC-CH
Q ss_conf 8976898034465667798899999999998637868872244368858999999998401288----851674166-02
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF----EKMLYFGSG-YA 101 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~----e~al~~~sG-~~ 101 (381)
.++++|+|+--|= .|..-|.++++..++++ +--++.+.+ .|..++.+++-+.+.+-+|. |+-+++.+| ..
T Consensus 18 ~~~dvi~l~vgdp-df~~p~~i~ea~~~~~~-~g~~~Y~~~---~G~~~lreaia~~~~~r~g~~~~p~~~i~vt~G~~~ 92 (378)
T PRK07682 18 NMEGVISLGVGEP-DFVTPWNVREASIRSLE-QGYTSYTAN---AGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQ 92 (378)
T ss_pred CCCCCEECCCCCC-CCCCCHHHHHHHHHHHH-CCCCCCCCC---CCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHH
T ss_conf 8998288999989-99878999999999985-699998999---888999999999999984899997775999078599
Q ss_pred HHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC-------CCHHHHHHHHHHHHHCCCCCCCEEEECCCCC
Q ss_conf 456556663168971004542026775266640876403056-------8814789976431000247860797146215
Q gi|254780486|r 102 ANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH-------NNINSFAENINKWRKSGGKGFPWIVVESIYS 174 (381)
Q Consensus 102 An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~~vv~egv~S 174 (381)
|...++.++++|||.|+.-.=.......-+.+.+++.+.++- -|+++||+.+.. +.+.+++.-.-..
T Consensus 93 al~~~~~~l~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~~~~~~~~~~~~d~~~le~~~~~------~~k~iil~~P~NP 166 (378)
T PRK07682 93 ALDVAMRAIINPGDEVLIVEPSFVSYAPLVTLAGGVPVPVATSLENEFKVQPAQIEAAITA------KTKAILLCSPNNP 166 (378)
T ss_pred HHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHCCC------CCCEEEECCCCCC
T ss_conf 9999999965999989992585052799999818856994026545863799999973652------6838998289798
Q ss_pred CCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCC
Q ss_conf 766134---6899999863136089861311222347776401100001346521001346565302---6752451001
Q gi|254780486|r 175 MDGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIY 248 (381)
Q Consensus 175 m~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii 248 (381)
.|.+- .|++|.++|++||++++.||+|+.-++...-.......+..+++|++.||||.|+..| ||+.++++++
T Consensus 167 -tG~v~s~~el~~l~~la~~~~i~iisDEiY~~l~~~~~~~~~~~~~~~~~~~i~~~s~SK~f~l~G~R~G~~~~~~~~~ 245 (378)
T PRK07682 167 -TGAVLNKSELEEIAVIVEKHNLIVLSDEIYAELTYDEAYTSFASIKGMRERTILISGFSKGFAMTGWRLGMIAAPVYFS 245 (378)
T ss_pred -CCCCCCHHHHHHHHHHHHHCCEEEECCCHHHHHCCCCCCCCHHHCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECHHHH
T ss_conf -8888899999999997644596795220146530698767765525644454202341242078573069897089999
Q ss_pred CCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCC--EEEEE--ECC-HHH
Q ss_conf 0000121100001357750257898878988627-10224789999999987641797899897--28999--589-799
Q gi|254780486|r 249 DYLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKKIGFSSQSH--IQSIV--IGD-NKS 322 (381)
Q Consensus 249 ~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~~g~~~~s~--I~~v~--~gd-~~~ 322 (381)
+.+........+ +.|.+...++.++++.-.+. +++++..+++..++.+. ...+++....| -..++ +.+ ...
T Consensus 246 ~~~~~~~~~~~~--~~~~~~q~aa~~al~~~~~~~~~~~~~~~~~r~~~~~~-l~~~g~~~~~P~g~~~~~~~~~~~~~~ 322 (378)
T PRK07682 246 EAMLKIHQYSMM--CAPTMAQFAALEALRNGNDDVERMRDSYRKRRNFFVTS-LNEIGLTCHVPGGAFYAFPSISSTGLS 322 (378)
T ss_pred HHHHHHHHHCCC--CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-HHHCCCEECCCCEEEEEEEECCCCCCC
T ss_conf 999999975567--79848999999999757687999999999999999999-997598220688678995787888989
Q ss_pred HHHHHHHH-HHCCEEEEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999-97791898622-88888887039996287899999999999999998873
Q gi|254780486|r 323 CLNIAKNL-QKKGFDIRAIR-PPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 323 a~~~~~~L-~~~Gi~v~~i~-~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
..+++++| .++||.+.|.. | -+.+...+|++.. .++|+++..++.|+++++|.
T Consensus 323 ~~~~~~~ll~~~~V~v~PG~~F--g~~g~~~iRl~~a--~~~e~l~eal~Rl~~~l~~~ 377 (378)
T PRK07682 323 SEEFAEQLLLEEKVAVVPGSVF--GESGEGFIRCSYA--TSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred HHHHHHHHHHHCCEEEECCHHH--CCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999699999886222--8999897999961--99999999999999999846
No 173
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.88 E-value=3e-19 Score=140.13 Aligned_cols=337 Identities=15% Similarity=0.143 Sum_probs=185.9
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH---CCCCCEEEECCCCHHH
Q ss_conf 8976898034465667798899999999998637868872244368858999999998401---2888516741660245
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADF---FGFEKMLYFGSGYAAN 103 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~---~g~e~al~~~sG~~An 103 (381)
.|+++++|+--+ =.+...+.++++. +++.. --++.+.+ .|..++-+++-+.+.++ ...++.++++.+..|-
T Consensus 28 ~G~~vi~l~iG~-Pd~~~P~~~~~a~-~~~~~-~~~~Y~~~---~G~~~LReaia~~~~~~g~~~~~d~I~iT~Ga~~al 101 (396)
T PRK07568 28 RGIKVYHLNIGQ-PDIKTPEVFFEAI-RNYDE-EVLAYSHS---AGIDSLREAFSKYYKRFNIDFDKDEIIVTNGGSEAI 101 (396)
T ss_pred CCCCEEECCCCC-CCCCCCHHHHHHH-HHHCC-CCCCCCCC---CCCHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHHH
T ss_conf 799808887988-9998769999999-85073-78988998---671999999999999868898822289857806999
Q ss_pred HHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC---CCH--HHHHHHHHHHHHCCCCCCCEEEECCCCCC-CC
Q ss_conf 6556663168971004542026775266640876403056---881--47899764310002478607971462157-66
Q gi|254780486|r 104 MAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH---NNI--NSFAENINKWRKSGGKGFPWIVVESIYSM-DG 177 (381)
Q Consensus 104 ~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H---nD~--~~Le~~l~~~~~~~~~~~~~vv~egv~Sm-~G 177 (381)
..++.+++++||.|++..=...+....+++.+++.+.++- +++ .++++..+... ++.+.+++.. .++ .|
T Consensus 102 ~~~~~~l~~pGD~Vlv~~P~y~~y~~~~~~~g~~~v~v~~~~e~g~~lp~~~~l~~~~~---~~tk~ii~~~--P~NPTG 176 (396)
T PRK07568 102 LFALMAICDPGDEIIVPEPFYANYNGFATSAGVKIVPVTTKIEEGFHLPKKEEIEKLIT---DKTKAILISN--PGNPTG 176 (396)
T ss_pred HHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEECCCCHHHCCCCCCHHHHHHHCC---CCCEEEEECC--CCCCCC
T ss_conf 99999727998989993897532599999849878516767211887896999997477---6574998589--929887
Q ss_pred CHH---HHHHHHHHHHHCCEEEEECCCCCCCCCC-CCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEEC-CCCCCC
Q ss_conf 134---6899999863136089861311222347-776401100001346521001346565302---67524-510010
Q gi|254780486|r 178 DKA---PLDDLVKIANDYDGFIVVDEAHATGVCG-PLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGS-NKIIYD 249 (381)
Q Consensus 178 ~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G-~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~-~~~ii~ 249 (381)
.+. .+++|+++|++||++++.||+++--++. ..-..+....+..+++|+++||||.|+..| ||+++ ++++++
T Consensus 177 ~v~s~~~~~~l~~la~~~~~~ii~De~Y~~l~y~g~~~~s~~~~~~~~~~vI~i~S~SK~~~~~G~RiG~~v~~~~~~~~ 256 (396)
T PRK07568 177 VVYTKEELRQLADIAKEHDLFLISDEVYREFTYDGLKYTSAMNIEGIEDRVIIIDSVSKRYSACGARIGSLITKNKELIK 256 (396)
T ss_pred CCCCHHHHHHHHHHHHHHCEEEECCCCHHHHEECCCCCCCHHCCCCCCCCEEEECCCCCCCCCCHHHEEEEECCCHHHHH
T ss_conf 54015789999999987106674245355522089877572005565442256404556657840543555309999999
Q ss_pred CCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCCCCCC---CCCC-EEEEEECCHHHHH
Q ss_conf 000121100001357750257898878988627-1022478999999998764179789---9897-2899958979999
Q gi|254780486|r 250 YLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKKIGFS---SQSH-IQSIVIGDNKSCL 324 (381)
Q Consensus 250 ~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~~g~~---~~s~-I~~v~~gd~~~a~ 324 (381)
.+.......+ +.|.+.-.++.++++.-++. .++++..+++............++. +.+. .+.+.++. ....
T Consensus 257 ~~~~~~~~~~---~~~~~~Q~aa~~~l~~~~~~~~~~~~~y~~rrd~~~~~L~~~~g~~~~~P~Ggfyl~~~lp~-~~~~ 332 (396)
T PRK07568 257 QAMKLCQARL---CPPTLEQIGAAALLNTPESYFKEVREEYEKRRDILYEGLNKIPGVVCEKPTGAFYIIAKLPV-DDAE 332 (396)
T ss_pred HHHHHHHCCC---CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCEEEEEEEECCC-CCHH
T ss_conf 9999712147---89779999999998587799999999999999999999970799786788857899995899-9999
Q ss_pred HHHHHHHH------CCEEEEEEC--CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 99999997------791898622--888888870399962878999999999999999988738
Q gi|254780486|r 325 NIAKNLQK------KGFDIRAIR--PPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 325 ~~~~~L~~------~Gi~v~~i~--~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
+++++|++ +||.+.|.. |+.-..|+..+||+.. .++|+|++.++.|++++++.+
T Consensus 333 ~f~~~ll~~~~~~~~~V~v~PG~~F~~~~g~g~~~iRls~~--~~~e~l~ea~~Rl~~~l~~~~ 394 (396)
T PRK07568 333 DFAKWMLTDFEYNGETVMVAPASGFYATPGLGKDEIRIAYV--LEKEDLRRAMEILKKALEAYN 394 (396)
T ss_pred HHHHHHHHHHHHCCCEEEEECCHHHCCCCCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHC
T ss_conf 99999999621248869997763416899899996999971--999999999999999999852
No 174
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.88 E-value=4e-20 Score=145.59 Aligned_cols=325 Identities=15% Similarity=0.107 Sum_probs=183.5
Q ss_pred ECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC--------CCCEEEECCCCHHHH
Q ss_conf 803446566779889999999999863786887224436885899999999840128--------885167416602456
Q gi|254780486|r 33 DFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG--------FEKMLYFGSGYAANM 104 (381)
Q Consensus 33 ~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g--------~e~al~~~sG~~An~ 104 (381)
+|++++. .+...|.+.++..+......- +.++...-+.+|-+.+|+|++ .|..++.+.+..+..
T Consensus 2 ~l~~~~~-~~~~~~~~~~~~~~~~~~~~~-------~~y~~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~al~ 73 (350)
T cd00609 2 DLSIGEP-DFPPPPEVLEALAAAALRAGL-------LGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALS 73 (350)
T ss_pred CCCCCCC-CCCCCHHHHHHHHHHHHCCCC-------CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHEEEECCHHHHHH
T ss_conf 5858689-998799999999999747467-------58799988199999999998787389974797899269999999
Q ss_pred HHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCC----CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHH
Q ss_conf 5566631689710045420267752666408764030568----814789976431000247860797146215766134
Q gi|254780486|r 105 AILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHN----NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKA 180 (381)
Q Consensus 105 ~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~Hn----D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~a 180 (381)
.++.++++++|.|+...-.......-++..+.+++.++-. +..+.+ .+.... .++.+.++++..=. =+|.+-
T Consensus 74 ~~~~~l~~~gd~vlv~~P~y~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~-~~~~~~--~~~~~~v~l~~P~N-PtG~~~ 149 (350)
T cd00609 74 LLLRALLNPGDEVLVPDPTYPGYEAAARLAGAEVVPVPLDEEGGFLLDLE-LLEAAK--TPKTKLLYLNNPNN-PTGAVL 149 (350)
T ss_pred HHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHH-HHHHHC--CCCCCEEEECCCCC-CCCCCC
T ss_conf 99999808989899947986306999998299412556560038676689-999856--88997898569949-725463
Q ss_pred H---HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCC-CCCCCCC
Q ss_conf 6---899999863136089861311222347776401100001346521001346565302---67524510-0100001
Q gi|254780486|r 181 P---LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKI-IYDYLIN 253 (381)
Q Consensus 181 p---L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~-ii~~l~~ 253 (381)
+ +++|+++|++||+++++||+|+.-++...........+..+++|+++||||.||..| ||+.++++ +++.++.
T Consensus 150 ~~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~~l~GlRiG~~~~~~~~~~~~~~~ 229 (350)
T cd00609 150 SEEELEELAELAKKHGILIISDEAYAELVYDGEPPPALALLDAYERVIVLRSFSKTFGLPGLRIGYLIAPPEELLERLKK 229 (350)
T ss_pred CHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCHHHHCCCCCEEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHHH
T ss_conf 37889899999862386268853412203699888967855779808999117230379453779999888999999986
Q ss_pred CCCCEECCCCCCCCHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHCCCCC----CCCCCEEEEEECCHHHHHHHHH
Q ss_conf 2110000135775025789887898862-7102247899999999876417978----9989728999589799999999
Q gi|254780486|r 254 YAKPFIYTTSPSPILAVVACEALKLIKR-KPALHKSLLQLINITDKIANKKIGF----SSQSHIQSIVIGDNKSCLNIAK 328 (381)
Q Consensus 254 ~~~~~ifst~l~P~~~aaa~aal~~l~~-~~~~~~~l~~~~~~~~~~~~~~~g~----~~~s~I~~v~~gd~~~a~~~~~ 328 (381)
..... . ...|+....++.+.++.-.+ -.+.++.+.++.+.+.+......+. +..+..+-+.+.+......+.+
T Consensus 230 ~~~~~-~-~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~p~~g~f~~~~~~~~~~~~~~~~ 307 (350)
T cd00609 230 LLPYT-T-SGPSTLSQAAAAAALDDGEEHLEELRERYRRRRDALLEALKELGPLVVVKPSGGFFLWLDLPEGDDEEFLER 307 (350)
T ss_pred HCCCC-C-CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEEECCCCCHHHHHHH
T ss_conf 24214-6-789879999999998682999999999999999999999985799612079955399898999982999999
Q ss_pred HHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 9997791898622888888870399962878999999999999999
Q gi|254780486|r 329 NLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQ 374 (381)
Q Consensus 329 ~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~ 374 (381)
.+.++||++.+...- -+.+...+|+++.. ++++++++++.|++
T Consensus 308 ~l~~~gv~v~~g~~f-~~~~~~~iRl~~~~--~~~~~~~~~~rl~~ 350 (350)
T cd00609 308 LLLEAGVVVRPGSAF-GEGGEGFVRLSFAT--PEEELEEALERLAE 350 (350)
T ss_pred HHHHCCEEEEECHHH-CCCCCCEEEEEECC--CHHHHHHHHHHHCC
T ss_conf 999799999924564-88998979999639--89999999998578
No 175
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.88 E-value=7.6e-20 Score=143.84 Aligned_cols=304 Identities=19% Similarity=0.246 Sum_probs=185.7
Q ss_pred CCCEEEECCCCCC-CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CEEEECCCCHHHH
Q ss_conf 8976898034465-6677988999999999986378688722443688589999999984012888-5167416602456
Q gi|254780486|r 27 RRQDIWDFTSHDY-LALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE-KMLYFGSGYAANM 104 (381)
Q Consensus 27 ~~~~~l~f~s~dY-LGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e-~al~~~sG~~An~ 104 (381)
.++..+-+.||-+ +|.+ +. ...+.+ .+|+- +.+.+|-++||+++|.+ +.+++..|-.--+
T Consensus 26 ~~~~~ikL~sNEnP~~p~--~~---~~~~~l-nrYPD------------~~~~~Lr~alA~~~gv~~e~I~vGnGSdElI 87 (355)
T PRK01688 26 GGNGDVWLNANEYPTAVE--FQ---LTQQTL-NRYPE------------CQPKAVIENYAQYAGVKPEQVLVSRGADEGI 87 (355)
T ss_pred CCCCCEEEECCCCCCCCC--HH---HHHHHH-CCCCC------------CCHHHHHHHHHHHHCCCHHHEEEECCHHHHH
T ss_conf 999968957899989987--76---767886-24979------------9889999999998685877899816899999
Q ss_pred -HHHHHHCCCC-CCCCH-HHHCCHHHH-HHHHHCCCCCEEECCC-CH-HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCC
Q ss_conf -5566631689-71004-542026775-2666408764030568-81-47899764310002478607971462157661
Q gi|254780486|r 105 -AILSTLPQAT-DLIVY-DKLVHASIR-EGINSGKAQAIAIPHN-NI-NSFAENINKWRKSGGKGFPWIVVESIYSMDGD 178 (381)
Q Consensus 105 -~~i~~l~~~~-d~ii~-D~~~HaSi~-~g~~ls~a~~~~f~Hn-D~-~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~ 178 (381)
.++.++++++ |.|+. +. -.|++ ..+++.+++++.++-+ |. -|++..+.... +.+ +|++-.=.-=+|.
T Consensus 88 ~~l~raf~~pg~d~vl~~~P--tF~~Y~~~a~~~g~~~~~vpl~~~f~~d~~~~~~~~~----~~k-lvficNPNNPTG~ 160 (355)
T PRK01688 88 ELLIRAFCEPGKDAILYCPP--TYGMYSVSAETIGVECRTVPTLENWQLDLPAISDNLD----GVK-VVYVCSPNNPTGN 160 (355)
T ss_pred HHHHHHHHCCCCCEEEECCC--CHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCC----CCC-EEEECCCCCCCCC
T ss_conf 99999985589974997788--7689999998679579995276576869999997515----888-8998689998776
Q ss_pred HHHHHHHHHHHHHC--CEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCC
Q ss_conf 34689999986313--6089861311222347776401100001346521001346565302---675245100100001
Q gi|254780486|r 179 KAPLDDLVKIANDY--DGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLIN 253 (381)
Q Consensus 179 ~apL~~i~~l~~~y--~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~ 253 (381)
+.+..+|.++++.. +++++||||+. -+. +. ..........+++|++.||||+||..| ||+.+++++++.++.
T Consensus 161 ~~~~~~l~~l~~~~~~~~lvVvDEAY~-eF~-~~-~s~~~l~~~~~NliVlRTfSK~~gLAGlRlGy~ia~~~ii~~l~k 237 (355)
T PRK01688 161 LINPQDLRTLLELTRGKAIVVADEAYI-EFC-PQ-ASLAGWLAEYPHLVILRTLSKAFALAGLRCGFTLANEEVINLLLK 237 (355)
T ss_pred CCCHHHHHHHHHHCCCCCEEEEECHHH-HCC-CC-HHHHHHHHCCCEEEEEEEHHHHHCCCCCCEEEEECCHHHHHHHHH
T ss_conf 468999999997588886688554164-347-64-004567640772899951668752687312788509999999998
Q ss_pred CCCCEECCCCCCCCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHH--HHCCCC-----CCCCCCEEEEEECCHHHHH
Q ss_conf 21100001357750257898878988627--10224789999999987--641797-----8998972899958979999
Q gi|254780486|r 254 YAKPFIYTTSPSPILAVVACEALKLIKRK--PALHKSLLQLINITDKI--ANKKIG-----FSSQSHIQSIVIGDNKSCL 324 (381)
Q Consensus 254 ~~~~~ifst~l~P~~~aaa~aal~~l~~~--~~~~~~l~~~~~~~~~~--~~~~~g-----~~~~s~I~~v~~gd~~~a~ 324 (381)
.-.+| ..+-+..+++.++++ .+ +..+++..+..+.++++ ....++ +++.+..+-+.+.+ +.
T Consensus 238 ~~~p~----~vn~~~~~~a~~al~---~~~~~~~~~~~~~i~~~R~~l~~~L~~l~~~~~v~pS~aNFil~~~~~---~~ 307 (355)
T PRK01688 238 VIAPY----PLSTPVADIAAQALS---PQGIAAMRERVAQINANRQWLIAALKEIPCVEQVFDSETNYILARFTA---SS 307 (355)
T ss_pred HHCCC----CCCHHHHHHHHHHHH---CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEECCC---HH
T ss_conf 50789----753999999999972---045999999999999999999999985899861689988789997799---99
Q ss_pred HHHHHHHHCCEEEEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 99999997791898622-888888870399962878999999999999999
Q gi|254780486|r 325 NIAKNLQKKGFDIRAIR-PPTVPINTARLRISITLNVDEPTIVKLFDILPQ 374 (381)
Q Consensus 325 ~~~~~L~~~Gi~v~~i~-~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~ 374 (381)
++.+.|+++||+|+... +|.. ...|||++. |++|.++++++|+.
T Consensus 308 ~~~~~L~~~GIlVR~~~~~~gl---~~~lRItig---t~een~~ll~aLka 352 (355)
T PRK01688 308 AVFKSLWDQGIILRDQNKQPGL---SNCLRITIG---TREECQRVIDALRA 352 (355)
T ss_pred HHHHHHHHCCEEEEECCCCCCC---CCEEEEECC---CHHHHHHHHHHHCC
T ss_conf 9999999799099558987899---998999769---99999999999736
No 176
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.88 E-value=4.5e-20 Score=145.29 Aligned_cols=330 Identities=19% Similarity=0.245 Sum_probs=212.7
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC--HHHHHHHHHHH-HHCCCCCEEEEC-CCCHHHHHHHHH
Q ss_conf 03446566779889999999999863786887224436885--89999999984-012888516741-660245655666
Q gi|254780486|r 34 FTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNY--NQHLELEEEAA-DFFGFEKMLYFG-SGYAANMAILST 109 (381)
Q Consensus 34 f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~--~~~~~lE~~lA-~~~g~e~al~~~-sG~~An~~~i~~ 109 (381)
-+|-|| .+|.|.++.---+..+|.-|..|-|...|+. +..++|-.+.| ++||.+.|-+-| ||..||++++.+
T Consensus 32 IASEN~----~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~VD~vE~laierak~LFga~~anVQPhSGs~AN~av~~A 107 (413)
T COG0112 32 IASENF----TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYVDEVEELAIERAKKLFGAEYANVQPHSGSQANQAVYLA 107 (413)
T ss_pred EECCCC----CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 512554----7899999974577530115899763567872179999999999999848875045888756899999999
Q ss_pred HCCCCCCCCHHHHCCHH-HHHHHHH--CCC--CCEEECCC------CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCC
Q ss_conf 31689710045420267-7526664--087--64030568------8147899764310002478607971462157661
Q gi|254780486|r 110 LPQATDLIVYDKLVHAS-IREGINS--GKA--QAIAIPHN------NINSFAENINKWRKSGGKGFPWIVVESIYSMDGD 178 (381)
Q Consensus 110 l~~~~d~ii~D~~~HaS-i~~g~~l--s~a--~~~~f~Hn------D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~ 178 (381)
|.+|+|.|+.=.++|.- +-.|.+. |+. +.+.|+-+ |++.++++.++++. +.+|+-=+.|| -
T Consensus 108 ll~pGD~imgm~l~~GGHltHg~~v~~sG~~~~~v~Y~vd~et~~IDyD~~~k~a~e~kP-----Klii~G~SaY~---r 179 (413)
T COG0112 108 LLQPGDTIMGLDLSHGGHLTHGSPVNFSGKLFNVVSYGVDPETGLIDYDEVEKLAKEVKP-----KLIIAGGSAYS---R 179 (413)
T ss_pred HCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCC-----CEEEECCCCCC---C
T ss_conf 738988575056787876557998776640577676240633475179999999998499-----78997760355---4
Q ss_pred HHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCC-CCEEEEEECCC-CCCCCCCCCCC
Q ss_conf 34689999986313608986131122234777640110000134652100134656-53026752451-00100001211
Q gi|254780486|r 179 KAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKAL-GSSGALVGSNK-IIYDYLINYAK 256 (381)
Q Consensus 179 ~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~-g~~GG~i~~~~-~ii~~l~~~~~ 256 (381)
..|.++++++|++.|++|++|=||=.|.+ ..| .+.-++..-+++++|-.|.| |-.||.|+++. ++.+.+...--
T Consensus 180 ~id~~~~reIad~VGA~L~~DmAHiaGLV-A~G---~~p~P~~~AdvVTtTTHKTlrGPrGG~Il~~~eel~kkin~aVF 255 (413)
T COG0112 180 PIDFKRFREIADEVGAYLMVDMAHVAGLI-AGG---VHPNPLPHADVVTTTTHKTLRGPRGGIILTNDEELAKKINSAVF 255 (413)
T ss_pred CCCHHHHHHHHHHHCCEEEEHHHHHHHHH-HCC---CCCCCCCCCCEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHCC
T ss_conf 46789999999871936772177888887-456---67999875526757753477899841798362999987640007
Q ss_pred CEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHH-HHHHCCCCC---CCCCCEEEEEECCH-HHHHHHHHHH
Q ss_conf 00001357750257898878988627-102247899999999-876417978---99897289995897-9999999999
Q gi|254780486|r 257 PFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITD-KIANKKIGF---SSQSHIQSIVIGDN-KSCLNIAKNL 330 (381)
Q Consensus 257 ~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~-~~~~~~~g~---~~~s~I~~v~~gd~-~~a~~~~~~L 330 (381)
|-+.++++.-..++-+.+.-+.++-+ .+-.++..+|++.+. .+...++.+ -++++.+-|-+.+. -.-......|
T Consensus 256 Pg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G~~vvsGgTdnHl~lVDl~~~~~~Gk~ae~~L 335 (413)
T COG0112 256 PGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERGFKVVSGGTDNHLVLVDLRSKGLTGKKAEAAL 335 (413)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCEEEEEECCCCCCCHHHHHHHH
T ss_conf 76678827888999999999972813899999999999999999997698671588644489997246798778999999
Q ss_pred HHCCEEEEEECC---CCCCCCCCEEEEEC----CCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 977918986228---88888870399962----87899999999999999998873
Q gi|254780486|r 331 QKKGFDIRAIRP---PTVPINTARLRISI----TLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 331 ~~~Gi~v~~i~~---PtVp~~~~rlRi~v----~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
-+.||.++--.- |.-|..++.|||-. +....++|+++..+.|.+++...
T Consensus 336 ~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~~I~~vl~~~ 391 (413)
T COG0112 336 ERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIADLIADVLDGL 391 (413)
T ss_pred HHCCEEECCCCCCCCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHHHHHHHHHHCC
T ss_conf 97097652688999998887876634066888635798899999999999999550
No 177
>PRK07543 consensus
Probab=99.87 E-value=6.3e-19 Score=138.11 Aligned_cols=334 Identities=11% Similarity=0.096 Sum_probs=194.0
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC----CCEEEECCCCHH
Q ss_conf 8976898034465667798899999999998637868872244368858999999998401288----851674166024
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF----EKMLYFGSGYAA 102 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~----e~al~~~sG~~A 102 (381)
.|+++++|+.-|- .+...|.+++++.++++ .--++.+.+. |..++.+++-+.+.+.+|. +..++.+.+..+
T Consensus 29 ~G~dii~l~~G~p-df~~p~~i~~a~~~al~-~~~~~Y~~~~---G~~eLR~aia~~~~~~~g~~~~pd~V~vt~G~~~a 103 (400)
T PRK07543 29 AGRDVIGLGAGEP-DFDTPDNIKQAAIAAIN-AGKTKYTAVD---GIPELKQAICAKFKRENGLDYKPEQVIVGTGGKQI 103 (400)
T ss_pred CCCCEEECCCCCC-CCCCCHHHHHHHHHHHH-CCCCCCCCCC---CHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCHHH
T ss_conf 7998078999799-99979999999999984-5999898998---80999999999999984899880428992782699
Q ss_pred HHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC-------CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
Q ss_conf 56556663168971004542026775266640876403056-------88147899764310002478607971462157
Q gi|254780486|r 103 NMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH-------NNINSFAENINKWRKSGGKGFPWIVVESIYSM 175 (381)
Q Consensus 103 n~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm 175 (381)
...++.+++.|||.|++-.=.-.+-...+.+.+++.+.++. -|+++|++.+. ++.+.+|+.-.-..
T Consensus 104 l~~~~~al~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~v~~~~e~~~~~d~~~le~~i~------~~~k~iil~~P~NP- 176 (400)
T PRK07543 104 LYNALMATLNPGDEVIIPAPYWVSYPEMVALAGGTPVFVETTAEFGFKLTPEALEAAIT------PKTKWFIFNSPSNP- 176 (400)
T ss_pred HHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHCCEEEEEECCCCCCCCCCHHHHHHHCC------CCCEEEEECCCCCC-
T ss_conf 99999985799998998278665536899980883599524633375438477897478------66719998799898-
Q ss_pred CCCHH---HHHHHHHHHHHC-CEEEEECCCCCCCCCCCCC-CEEEEE-HHCCCCCCCCCCCCCCCCCEE---EEEECCCC
Q ss_conf 66134---689999986313-6089861311222347776-401100-001346521001346565302---67524510
Q gi|254780486|r 176 DGDKA---PLDDLVKIANDY-DGFIVVDEAHATGVCGPLG-KGLTHI-IEERNNVIVMHSCSKALGSSG---ALVGSNKI 246 (381)
Q Consensus 176 ~G~~a---pL~~i~~l~~~y-~~~LivDEah~~Gv~G~~G-~G~~~~-~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ 246 (381)
+|.+. .|++|+++|.+| +++++.||+|+--+++..- ....+. -+..+++|++.||||+|+..| ||+.++++
T Consensus 177 TG~v~s~~~l~~l~~~~~~~~~v~iisDEiY~~l~~~~~~~~~~~~~~p~~~~~~i~~~s~SK~~~~~G~RiG~~~~p~~ 256 (400)
T PRK07543 177 TGAAYTRAELKALTDVLVKHPHVWVLTDDMYEHLVYDDFVFTTPAQVEPSLYDRTLTMNGVSKAYAMTGWRIGYAAGPAE 256 (400)
T ss_pred CCCCCCHHHHHHHHHHHHHHCCCEECCHHHHHHHHCCCCCCCCHHHCCHHHHCCCCCCCCCCHHCCCCCCCEEEEECCHH
T ss_conf 88376416789999988875386031312456641489788996782902210342037740520683430488867899
Q ss_pred CCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCC--EEEEEE--CC--
Q ss_conf 010000121100001357750257898878988627-10224789999999987641797899897--289995--89--
Q gi|254780486|r 247 IYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKKIGFSSQSH--IQSIVI--GD-- 319 (381)
Q Consensus 247 ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~~g~~~~s~--I~~v~~--gd-- 319 (381)
+++.+... ..+..++ .+.+...++.++|+.-++- .+.++.++++..+.........++....| -..++. .+
T Consensus 257 li~~~~~~-~~~~~~~-~~~~~Q~aa~~al~~~~~~~~~~~~~~~~rrd~~~~~L~~~~g~~~~~P~g~fy~~~~~~~~~ 334 (400)
T PRK07543 257 LIKAMDTI-QSQSTSN-PCSIAQWAAVEALNGPQDFIPANKKIFQERRDLVVSMLNQAKGIDCPTPEGAFYVYPSCAGLI 334 (400)
T ss_pred HHHHHHHH-HHHHCCC-CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEECCHHHH
T ss_conf 99999999-9750467-660999999999858599999999999999999999998677984679986689821103232
Q ss_pred ---------HHHHHHHHHHHHH-CCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf ---------7999999999997-79189862288888887039996287899999999999999998873
Q gi|254780486|r 320 ---------NKSCLNIAKNLQK-KGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 320 ---------~~~a~~~~~~L~~-~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
.....+++.+|++ .||.+.|...=-. + +.+||+.. .+++.++..++.|++.++.+
T Consensus 335 ~~~~p~~~~~~~~~~f~~~ll~~~gV~v~PG~~FG~--~-~~~Ri~~a--~~~e~l~ea~~Rl~~f~~~l 399 (400)
T PRK07543 335 GKTTPSGKVIETDEDFVTELLETEGVAVVHGSAFGL--G-PNFRISYA--TSDELLEEACKRIQRFCASL 399 (400)
T ss_pred HCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC--C-CCEEEEEC--CCHHHHHHHHHHHHHHHHHC
T ss_conf 003755676799999999999849999984701089--9-99899975--98999999999999999965
No 178
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.87 E-value=9.6e-19 Score=136.98 Aligned_cols=330 Identities=15% Similarity=0.149 Sum_probs=186.8
Q ss_pred CCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCC---CCCCCCCCCCCHHHHHHHHHHHHHCC----CCCEEEECC
Q ss_conf 28976898034465667798899999999998637868---87224436885899999999840128----885167416
Q gi|254780486|r 26 LRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIG---SGGSRLLCGNYNQHLELEEEAADFFG----FEKMLYFGS 98 (381)
Q Consensus 26 ~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~---~~~sr~~~G~~~~~~~lE~~lA~~~g----~e~al~~~s 98 (381)
..++++++|+--+= .+..-+.|++++.++++. -.++ .+.+ .|..++-+++-+.+.+-+| .|..++.+.
T Consensus 31 ~G~~dVI~l~iG~P-df~~P~~i~~a~~~a~~~-~~~~~~~Y~~~---~G~~eLReaIa~~~~~~~g~~~~pe~Iiit~G 105 (396)
T PRK06836 31 YGAENVFDFSLGNP-DVEPPAAVKEALRELAEE-EDPGMHGYMPN---AGYPEVREAVAESLNARFGTPLTADHIVMTCG 105 (396)
T ss_pred CCCCCEEECCCCCC-CCCCCHHHHHHHHHHHHC-CCCCCCCCCCC---CCCHHHHHHHHHHHHHHHCCCCCHHHEEECCC
T ss_conf 19998588689598-999779999999999967-99888877987---47699999999999998688995898898588
Q ss_pred CCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC------CCHHHHHHHHHHHHHCCCCCCCEEEECCC
Q ss_conf 602456556663168971004542026775266640876403056------88147899764310002478607971462
Q gi|254780486|r 99 GYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH------NNINSFAENINKWRKSGGKGFPWIVVESI 172 (381)
Q Consensus 99 G~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H------nD~~~Le~~l~~~~~~~~~~~~~vv~egv 172 (381)
+-.|-..++.++++|||.|+...=.-.+-...+++.+++.+.++- -|+++|++.+. ++.+.+++.-.=
T Consensus 106 a~~al~~~~~~ll~pGD~Vlvp~P~y~~y~~~~~~~g~~~v~v~~~~e~~~~d~~~l~~~i~------~~tk~iilnsP~ 179 (396)
T PRK06836 106 AAGALNVVLKALLNPGDEVIIFAPYFVEYKFYVDNHGGKLVVVPPDTEDFQPDLDALEAAIT------PKTKAVIINSPN 179 (396)
T ss_pred HHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHCC------CCCEEEEECCCC
T ss_conf 79999999999669999899827865068999998499799931676567679999997367------566299986898
Q ss_pred CCCCCCHHH---HHHHHHHHHH------CCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EE
Q ss_conf 157661346---8999998631------36089861311222347776401100001346521001346565302---67
Q gi|254780486|r 173 YSMDGDKAP---LDDLVKIAND------YDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---AL 240 (381)
Q Consensus 173 ~Sm~G~~ap---L~~i~~l~~~------y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~ 240 (381)
.. +|.+.+ |++|+++|++ |+++++.||+|+--++. |.-........+++|++.||||+|+..| ||
T Consensus 180 NP-TG~v~s~e~l~~i~~l~~~~~~~~~h~i~vIsDEiY~~l~fd--~~~~~s~~~~~d~~i~i~S~SK~~~m~G~RiG~ 256 (396)
T PRK06836 180 NP-TGVIYSEETLKALGALLEEKSKEYGRPIYLISDEPYREIVYD--GAEVPYIFKYYKNSIVVYSFSKSLSLPGERIGY 256 (396)
T ss_pred CC-CCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCHHHHCCC--CCCCCCHHHCCCEEEEEECCCCCCCCCCCCEEE
T ss_conf 98-998679999999999999865752886799805740753138--987899577478299996464220467311699
Q ss_pred EECCCCCCCCCCCCCCCEECCC-----CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC---CCCCE
Q ss_conf 5245100100001211000013-----577502578988789886271022478999999998764179789---98972
Q gi|254780486|r 241 VGSNKIIYDYLINYAKPFIYTT-----SPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIANKKIGFS---SQSHI 312 (381)
Q Consensus 241 i~~~~~ii~~l~~~~~~~ifst-----~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~~g~~---~~s~I 312 (381)
+++++++.+..... ....+++ -.+|.....+.+. .+..... .+..+++..+..+ .....|+. ++..
T Consensus 257 iv~~~~i~~~~~~~-~~~~~~~~~~~~v~a~~~~q~a~~~--~~~~~~~-~~~y~~rrd~l~~-~L~~~g~~~~~P~Ga- 330 (396)
T PRK06836 257 IAVNPEMEDADDLM-AALVFANRILGFVNAPSLMQRVVAK--LQDATVD-ISIYKRRRDLLYD-ALTELGFEFVKPQGA- 330 (396)
T ss_pred EEECHHHHHHHHHH-HHHHHHHHHHCCCCHHHHHHHHHHH--HCCCCHH-HHHHHHHHHHHHH-HHHHCCCEECCCCEE-
T ss_conf 98688999999999-9999876550556588999999999--7467266-9999999999999-999849863178816-
Q ss_pred EEEEECCH-HHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 89995897-999999999997791898622888888870399962878999999999999999988738
Q gi|254780486|r 313 QSIVIGDN-KSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 313 ~~v~~gd~-~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
..+++..+ ....++++.|+++||.+.|...= -+.+.+|++.. .++|+|++.++.|++.++|+.
T Consensus 331 fyl~~~~p~~d~~~f~~~l~e~gV~vvPG~~F---g~~g~vRls~a--~~~e~i~eal~rl~~~~~e~k 394 (396)
T PRK06836 331 FYLFPKSPIEDDVAFVEKAQKYNILLVPGSGF---GAPGYFRLAYC--VDTEQIERSLPAFEKLAKEYK 394 (396)
T ss_pred EEEEECCCCCCHHHHHHHHHHCCEEEEECCCC---CCCCCEEEEEC--CCHHHHHHHHHHHHHHHHHHC
T ss_conf 89986189999999999999699999827435---99980899970--899999999999999999863
No 179
>PRK07550 hypothetical protein; Provisional
Probab=99.87 E-value=1.3e-19 Score=142.30 Aligned_cols=333 Identities=14% Similarity=0.087 Sum_probs=189.3
Q ss_pred ECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHHHHCC----CCCEEEECCC
Q ss_conf 92897689803446566779889999999999863786-887224436885899999999840128----8851674166
Q gi|254780486|r 25 LLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPI-GSGGSRLLCGNYNQHLELEEEAADFFG----FEKMLYFGSG 99 (381)
Q Consensus 25 ~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~-~~~~sr~~~G~~~~~~~lE~~lA~~~g----~e~al~~~sG 99 (381)
.-.|++++||+.-+= .+...|.+++|+.+++.+ -+. +.+.+ .|...+.+++-+.+.+.+| .|+.++.+.+
T Consensus 26 ~~~G~~vI~L~~G~P-df~~p~~i~~a~~~a~~~-~~~~~Y~~~---~G~~~LR~aia~~~~~~~g~~~~pe~I~it~G~ 100 (387)
T PRK07550 26 FPAGRPLIDLSQAVP-VYPPPPELRRALAEAAGD-PAAHLYGPV---EGLPELREAYAAQYSRLYGAAINPGQVAITSGC 100 (387)
T ss_pred CCCCCCEEECCCCCC-CCCCCHHHHHHHHHHHCC-CCCCCCCCC---CCCHHHHHHHHHHHHHHHCCCCCHHHEEECCCH
T ss_conf 669997158989889-898789999999999669-888889898---571999999999999986889967988987678
Q ss_pred CHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC-------CCHHHHHHHHHHHHHCCCCCCCEEEECCC
Q ss_conf 02456556663168971004542026775266640876403056-------88147899764310002478607971462
Q gi|254780486|r 100 YAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH-------NNINSFAENINKWRKSGGKGFPWIVVESI 172 (381)
Q Consensus 100 ~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~~vv~egv 172 (381)
..|-..++.+++++||.|++..=.-.+....+++.+++.+.++- -|++++++.+.. +.+.+++.-.-
T Consensus 101 ~~al~~~~~al~~pGD~Vli~~P~Y~~y~~~~~~~G~~~~~vp~~~~~~~~~d~~~le~~~~~------~tk~iil~~P~ 174 (387)
T PRK07550 101 NQAFWAAMVTLAGAGDEVILPTPWYFNHKMWLDMLGIRAVLVPLDTGPGLLPDPEAAAALITP------RTRAIVLVTPN 174 (387)
T ss_pred HHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHCCC------CCCEEECCCCC
T ss_conf 999999999971898989982796753799999769989734777567987799999975565------78377038996
Q ss_pred CCCCCCH---HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC--EEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECC
Q ss_conf 1576613---468999998631360898613112223477764--01100001346521001346565302---675245
Q gi|254780486|r 173 YSMDGDK---APLDDLVKIANDYDGFIVVDEAHATGVCGPLGK--GLTHIIEERNNVIVMHSCSKALGSSG---ALVGSN 244 (381)
Q Consensus 173 ~Sm~G~~---apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~--G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~ 244 (381)
.. .|.+ ..+++|+++|++||++++.||+|+--+++ .++ .+....+..+++|.++||||.|+..| ||++++
T Consensus 175 NP-tG~v~s~e~l~~l~~la~~~~~~iI~DEiY~~~~~~-~~~~~~~~~~~~~~~~vI~i~S~SK~~~~~G~RiG~i~~~ 252 (387)
T PRK07550 175 NP-TGVVYPPELLHELYDLARRRGLALILDETYRDFDSR-GGAPHDLFADPDWGDTLVHLYSFSKAYRLTGHRVGALAAS 252 (387)
T ss_pred CC-CCCCCCHHHHHHHHHHCCCEEEEEEECCCHHHHHCC-CCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEEEC
T ss_conf 99-885107798534654303315899941757875338-8777667653366755999746764456754217999839
Q ss_pred CCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCCCCC--CCCCCEEEEEEC---
Q ss_conf 10010000121100001357750257898878988627-102247899999999876417978--998972899958---
Q gi|254780486|r 245 KIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKKIGF--SSQSHIQSIVIG--- 318 (381)
Q Consensus 245 ~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~~g~--~~~s~I~~v~~g--- 318 (381)
+++++.+........+ ..+.+...++.++++...+- ...+..+.++...+........++ ..... ..+++.
T Consensus 253 ~~~i~~~~~~~~~~~~--~~~~~~q~aa~~al~~~~~~~~~~~~~~~~rr~~l~~~l~~~~~~~~~~~G~-~f~w~~~~~ 329 (387)
T PRK07550 253 PARLAEIEKFLDTMAI--CAPRIGQIAVLWGIRNLADWVAGNRAEILRRRDALRAGFSRLPGWELLASGA-YFAYVRHPF 329 (387)
T ss_pred HHHHHHHHHHHHHHCC--CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCE-EEEEEECCC
T ss_conf 9999999999976036--7877999999999863099999999999999999999886468965478834-799883788
Q ss_pred CHHHHHHHHHHHH-HCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 9799999999999-77918986228888888703999628789999999999999999
Q gi|254780486|r 319 DNKSCLNIAKNLQ-KKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 319 d~~~a~~~~~~L~-~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
......+++++|+ +.||.+.|...= -+.+...+|++.. ..++++|+..++.|++-
T Consensus 330 ~~~~~~~~~~~ll~e~gV~v~PG~~F-g~~g~~~vRlsfa-~~~~~~i~ea~~RL~~f 385 (387)
T PRK07550 330 PDASSDEVARRLAKEAGILCLPGTMF-GPGGERYLRLAFA-NIDVAGIAELVERLRGF 385 (387)
T ss_pred CCCCHHHHHHHHHHHCCEEEECCHHH-CCCCCCEEEEEEC-CCCHHHHHHHHHHHHHH
T ss_conf 99899999999998699999787533-8899897999946-79999999999999865
No 180
>PRK08354 putative aminotransferase; Provisional
Probab=99.87 E-value=9.2e-20 Score=143.34 Aligned_cols=296 Identities=18% Similarity=0.227 Sum_probs=172.7
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHH
Q ss_conf 89768980344656677988999999999986378688722443688589999999984012888516741660245655
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAI 106 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~ 106 (381)
+..++||||||-== | --|.+.++..++++. . .| .+.+++|++.+|+++| +..++.+ |-.--+.+
T Consensus 6 ~~~~iidfssN~NP-~-~P~~~~~~~~~~~~~-~------~~-----YP~~~~L~~~la~~~g-~~i~~~~-Gs~e~i~~ 69 (312)
T PRK08354 6 RREGLIDFSASVNP-Y-PPEWLDEMFERAVEI-S------GR-----YTYYEWLEEEFSKLFG-EPITITA-GITEALYL 69 (312)
T ss_pred CHHHCEEECCCCCC-C-CCHHHHHHHHHHHHH-H------CC-----CCCHHHHHHHHHHHHC-CCEEECC-CHHHHHHH
T ss_conf 86641660799999-9-972999999960564-0------04-----9998999999988768-7969926-79999999
Q ss_pred HHHHCCCCCCCC-HHHHCCHHHH-HHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHH
Q ss_conf 666316897100-4542026775-26664087640305688147899764310002478607971462157661346899
Q gi|254780486|r 107 LSTLPQATDLIV-YDKLVHASIR-EGINSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDD 184 (381)
Q Consensus 107 i~~l~~~~d~ii-~D~~~HaSi~-~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~ 184 (381)
+.....+++.|+ .+.. .+.+ ..+++.+++++.++ +|.+.+++.+++ ...+++...=. =+|.+.+.++
T Consensus 70 l~~~~~~~~~vl~~~Pt--f~~Y~~~a~~~g~~v~~~~-~d~~~l~~~~~~-------~~~v~l~nPNN-PTG~~~~~~~ 138 (312)
T PRK08354 70 IGILALRDRKVIIPRHT--YGEYERVARFFAARIIKGP-NDPEKLEELVEK-------NSVVFFCNPNN-PDGKYYNFKE 138 (312)
T ss_pred HHHHHCCCCEEEEECCC--HHHHHHHHHHCCCEEEECC-CCHHHHHHHHCC-------CCEEEEECCCC-CCCCCCCHHH
T ss_conf 99997698989993599--9999999998698787359-998999863048-------98899968989-8678689899
Q ss_pred HH---HHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCE
Q ss_conf 99---9863136089861311222347776401100001346521001346565302---67524510010000121100
Q gi|254780486|r 185 LV---KIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPF 258 (381)
Q Consensus 185 i~---~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ 258 (381)
|. +.|++.++++++|||+.- +.++ .. ....+++|++.||||+||..| ||+.+++++++.++ .+|
T Consensus 139 l~~l~~~~~~~~~~vvvDEAY~e-f~~~-~~-----~~~~~nlivlrS~SK~~glaGlRlGy~i~~~e~i~~~r---~p~ 208 (312)
T PRK08354 139 LAPLIDAVEDKNVLLILDEAFID-FVKK-AE-----SPEGENIIKLRTFTKSYGVPGIRVGYVKGFEEAFRSVR---MPW 208 (312)
T ss_pred HHHHHHHCCCCCCEEEEECHHHH-HCCC-CC-----CCCCCCEEEEEECCHHHCCCCHHHHHHHCCHHHHHHHC---CCC
T ss_conf 99999864777848997404777-3676-33-----47779889997462643574043436627899999863---898
Q ss_pred ECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEE
Q ss_conf 001357750257898878988627-1022478999999998764179789989728999589799999999999779189
Q gi|254780486|r 259 IYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKKIGFSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDI 337 (381)
Q Consensus 259 ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~~g~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v 337 (381)
+.+....+++.++ ++++ ...++......+.+.++ ...+.+++.+..+-+.+++ +.++.+.|+++||+|
T Consensus 209 ----~vn~~a~~~~~~~---l~d~~~~~~~~~~~~~~er~~l-~~~~~~~s~aNFil~~~~~---a~~~~~~L~~~gIlV 277 (312)
T PRK08354 209 ----GIGSLGYAFLEFL---LEDNFEHLKKTLPLIWREKERF-EKFLYVKSDANFFIKDVGD---AEKFVEFLKRNGILV 277 (312)
T ss_pred ----CCCHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHH-HCCCCCCCCCCEEEEECCC---HHHHHHHHHHCCEEE
T ss_conf ----8749999999999---8816999999999999999999-5623689967389987799---999999998399199
Q ss_pred EEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 862288888887039996287899999999999999998
Q gi|254780486|r 338 RAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 338 ~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
+.....-. ...+||++. |++|.++++++|+++.
T Consensus 278 R~~~~fgl---~~~iRisvg---~~een~~li~aLke~~ 310 (312)
T PRK08354 278 RDCTSFGL---PGYVRFSVR---DREENEKLLNALREWR 310 (312)
T ss_pred EECCCCCC---CCEEEEECC---CHHHHHHHHHHHHHHH
T ss_conf 96899999---998999719---9999999999999885
No 181
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.87 E-value=6e-19 Score=138.27 Aligned_cols=355 Identities=15% Similarity=0.171 Sum_probs=201.6
Q ss_pred HHHHHHHHHHCCCEE---EECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 999999999759839---99289768980344656677988999999999986378688722443688589999999984
Q gi|254780486|r 9 YEERLQKIKSKGRHR---QLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAA 85 (381)
Q Consensus 9 ~~~~l~~~~~~g~~~---~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA 85 (381)
|.+++++++.+.-.. ...+..++|+|+--| -.+..-|.|++++.++++. --++.+.+ .|..++.+++-+.+.
T Consensus 7 ~s~~~~~~~~s~ir~~~~~~~~~~dvI~l~ig~-pdf~~p~~i~~a~~~~~~~-~~~~Y~~~---~G~~~lr~aia~~~~ 81 (390)
T PRK07309 7 FNKNLDKIEVSLIRQFDQSISDIPGILKLTLGE-PDFTTPEHVKEAAKAAIDA-NQSHYTGM---AGLLELRQAAADFVK 81 (390)
T ss_pred HHHHHHCCCCCHHHHHHHHHHCCCCEEECCCCC-CCCCCCHHHHHHHHHHHHC-CCCCCCCC---CCCHHHHHHHHHHHH
T ss_conf 999871299878999999860899908998978-9999889999999999847-99999799---774999999999999
Q ss_pred HHCCC----CCEEEECCC-CHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC--C----CHHHHHHHHH
Q ss_conf 01288----851674166-02456556663168971004542026775266640876403056--8----8147899764
Q gi|254780486|r 86 DFFGF----EKMLYFGSG-YAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH--N----NINSFAENIN 154 (381)
Q Consensus 86 ~~~g~----e~al~~~sG-~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H--n----D~~~Le~~l~ 154 (381)
+.+|. |+-+++.+| ..|-..++.++++|||.|++..=.-.+....+++.+++++.++- + |++.||+.+.
T Consensus 82 ~~~g~~~~p~~~I~it~G~~~al~~~~~~l~~pGD~Vli~~P~Y~~~~~~~~~~g~~~v~v~~~~~~~~~~~~~le~~~~ 161 (390)
T PRK07309 82 EKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYEPIVNLVGAEIVEIDTTENDFVLTPEMLEKAIL 161 (390)
T ss_pred HHHCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHH
T ss_conf 98589999888799888989999999999669989899837874419999998498899944620115789999999987
Q ss_pred HHHHCCCCCCCEEEECCCCCCCCCH---HHHHHHHHHHHHCCEEEEECCCCCCCCCCCC-CCEEEEEHHCCCCCCCCCCC
Q ss_conf 3100024786079714621576613---4689999986313608986131122234777-64011000013465210013
Q gi|254780486|r 155 KWRKSGGKGFPWIVVESIYSMDGDK---APLDDLVKIANDYDGFIVVDEAHATGVCGPL-GKGLTHIIEERNNVIVMHSC 230 (381)
Q Consensus 155 ~~~~~~~~~~~~vv~egv~Sm~G~~---apL~~i~~l~~~y~~~LivDEah~~Gv~G~~-G~G~~~~~~~~~~~iv~~Tl 230 (381)
... .+.+.+|+.-.-.. .|.+ ..|++|.++|++||++++.||+|+.-++... -..+.+. ..+++|++.+|
T Consensus 162 ~~~---~k~k~lil~~P~NP-tG~v~s~e~l~~i~~la~~~~v~iisDEiY~~l~~~~~~~~s~~~~--~~d~~i~~~s~ 235 (390)
T PRK07309 162 EQG---DKLKAVILNYPANP-TGVTYSREQIKALAEVLKKYDIFVISDEVYSELTYTGQSHVSIAEY--LPDQTILINGL 235 (390)
T ss_pred HCC---CCEEEEEECCCCCC-CCCCCCHHHHHHHHHHHHHCCEEEEEECCCHHCCCCCCCCCCHHHH--CCCCEEEEECC
T ss_conf 488---87499997899899-8887899999999999976898999505511101489886448775--55767999606
Q ss_pred CCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHH-HHHHHHCCCC
Q ss_conf 46565302---67524510010000121100001357750257898878988627-1022478999999-9987641797
Q gi|254780486|r 231 SKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINI-TDKIANKKIG 305 (381)
Q Consensus 231 sKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~-~~~~~~~~~g 305 (381)
||+|+..| ||+.+++++++.+... ..++.+ +.+.+...++.++++.-.+. ...++...++..+ .+.+...++.
T Consensus 236 SK~~~~~G~RiG~i~~~~~~~~~~~~~-~~~~~~-~~~~~~q~a~~~al~~~~~~~~~~~~~y~~rr~~l~~~l~~~~~~ 313 (390)
T PRK07309 236 SKSHAMTGWRIGLIFAPAELTAQLIKS-HQYLVT-AATTMAQFAAVEALTNGKDDALPMKKEYIKRRDYIIEKMTALGFK 313 (390)
T ss_pred CHHHHCCCCCEEEEECCHHHHHHHHHH-HHHHHC-CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
T ss_conf 056540466358997499999999999-865305-787499999999997482789999999999999999999862786
Q ss_pred CC-CC-CCEEEEEECC--HHHHHHHHHHH-HHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 89-98-9728999589--79999999999-9779189862288888887039996287899999999999999998873
Q gi|254780486|r 306 FS-SQ-SHIQSIVIGD--NKSCLNIAKNL-QKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 306 ~~-~~-s~I~~v~~gd--~~~a~~~~~~L-~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
+. ++ +..+.+.+.+ .....+++..| .++||.+.|...= -+.+...+|++... +++++++.++.|+++++|-
T Consensus 314 ~~~P~gg~ylw~~lp~~~~~d~~~~~~~l~~~~gV~v~PG~~F-g~~g~g~iRl~~a~--~~e~l~eal~Rl~~~l~e~ 389 (390)
T PRK07309 314 IIKPDGAFYIFAKIPAGYNQDSFKFLQDFAKEKAVAIIPGVAF-GPYGEGYVRLSYAA--SMETIKEAMKRLKEYMEEH 389 (390)
T ss_pred CCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEECCHHH-CCCCCCEEEEEEEC--CHHHHHHHHHHHHHHHHHC
T ss_conf 3389800698074578999899999999999699999777322-88999879999828--9999999999999999971
No 182
>PRK08362 consensus
Probab=99.87 E-value=1.9e-19 Score=141.34 Aligned_cols=334 Identities=13% Similarity=0.166 Sum_probs=189.9
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-----CEEEECCCCH
Q ss_conf 89768980344656677988999999999986378688722443688589999999984012888-----5167416602
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE-----KMLYFGSGYA 101 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e-----~al~~~sG~~ 101 (381)
..+++|+|+..+= .+..-|.+++++.++++ +--++.+.+ .|...+.+++-+.+.+.+|.+ +.++++.+-.
T Consensus 24 ~~~dvI~l~~g~p-d~~~p~~i~~a~~~~~~-~~~~~Y~~~---~G~~~Lr~aia~~~~~~~g~~~~p~~~i~it~G~~~ 98 (389)
T PRK08362 24 GMKDVISLGIGEP-DFDTPQHIKEYAKEALD-KGLTHYGPN---IGLPELREAIAEKLKKQNGIEADPKKEIMVLVGANQ 98 (389)
T ss_pred CCCCEEECCCCCC-CCCCCHHHHHHHHHHHH-CCCCCCCCC---CCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHH
T ss_conf 8998089999979-99878999999999985-587688998---570999999999998840999997643998188699
Q ss_pred HHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC---C----CCHHHHHHHHHHHHHCCCCCCCEEEECCCCC
Q ss_conf 45655666316897100454202677526664087640305---6----8814789976431000247860797146215
Q gi|254780486|r 102 ANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP---H----NNINSFAENINKWRKSGGKGFPWIVVESIYS 174 (381)
Q Consensus 102 An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~---H----nD~~~Le~~l~~~~~~~~~~~~~vv~egv~S 174 (381)
|...++.+++++||.|++..=.-..-...+++.+++.+.++ . -|+++|++.+.. +.+.+++.-.=..
T Consensus 99 al~~~~~~l~~pGD~Vlv~~P~Y~~y~~~~~~~g~~~v~vp~~~~~~~~~d~~~l~~~i~~------~~k~iil~~P~NP 172 (389)
T PRK08362 99 AFLMGLATFLKDGEEVLIPSPMFVSYAPAVILAGGKPVEVPTYEENEFRLNVDDLKKYVTE------KTRALIINSPNNP 172 (389)
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCC------CCEEEEECCCCCC
T ss_conf 9999999975899989981586542689999749989998545777887699999974544------6829998489898
Q ss_pred CCCCH---HHHHHHHHHHHHCCEEEEECCCCCCCCCCC-CCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCC
Q ss_conf 76613---468999998631360898613112223477-76401100001346521001346565302---675245100
Q gi|254780486|r 175 MDGDK---APLDDLVKIANDYDGFIVVDEAHATGVCGP-LGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKII 247 (381)
Q Consensus 175 m~G~~---apL~~i~~l~~~y~~~LivDEah~~Gv~G~-~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~i 247 (381)
.|.+ ..|++|.++|++||++++.||+|+--++.. .-..+...-+..+++|+++||||.|+..| ||+.+++++
T Consensus 173 -tG~v~s~~~l~~i~~~a~~~~~~ii~DEiY~~l~~~~~~~~s~~~~~~~~~~~i~~~S~SK~~~l~G~RiG~~i~~~~~ 251 (389)
T PRK08362 173 -TGSVLTKKDLEEIADFAVEHDLMVISDEVYEHFIYDGVKHYSIASLDGMFERTITVNGFSKTFAMTGWRLGFVAAPSWV 251 (389)
T ss_pred -CCCCCHHHHHHHHHHHHHHCCEEEEECCCHHHHCCCCCCCCCHHHCCCCCCCEEEECCCHHHCCCCCCCEEEEECCHHH
T ss_conf -4746319999999999875495798146456410189777686660454452023033101016876536999808999
Q ss_pred CCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHCCCCCCC---C-CCEEEEEECC-
Q ss_conf 10000121100001357750257898878988627---10224789999999987641797899---8-9728999589-
Q gi|254780486|r 248 YDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK---PALHKSLLQLINITDKIANKKIGFSS---Q-SHIQSIVIGD- 319 (381)
Q Consensus 248 i~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~---~~~~~~l~~~~~~~~~~~~~~~g~~~---~-s~I~~v~~gd- 319 (381)
++.+... ..+..+.+.+ ....++.++++--+.. .++++.++++..+..+. ....|++. + +..+.+.+.+
T Consensus 252 i~~~~~~-~~~~~~~~~~-~~q~a~~~al~~~~~~~~~~~~~~~~~~~r~~~~~~-l~~~g~~~~~P~g~~~~w~~~~~~ 328 (389)
T PRK08362 252 IEKMVKF-QMYNATCPVT-FIQYAAAKALRDERSWKAVEEMRKEYDRRRNLVWKR-LNEMGLPTVKPKGAFYIFPRIRDT 328 (389)
T ss_pred HHHHHHH-HHHCCCCCCH-HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH-HHHCCCCEECCCEEEEEEEECCCC
T ss_conf 9999999-9860478865-999999999859704799999878899999999998-887599555788258994788888
Q ss_pred HHHHHHHHHHHH-HCCEEEEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 799999999999-7791898622-88888887039996287899999999999999998873
Q gi|254780486|r 320 NKSCLNIAKNLQ-KKGFDIRAIR-PPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 320 ~~~a~~~~~~L~-~~Gi~v~~i~-~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
.....++++.|+ +.||.+.|.. |- +.+...+|++.. .++|++++.++.|+++++|-
T Consensus 329 ~~~~~~~~~~ll~e~gV~~~PG~~Fg--~~~~~~~Rl~~a--~~~e~l~ea~~RL~~~l~e~ 386 (389)
T PRK08362 329 GLTSKEFSELMLKEAKVAVVPGSAFG--KAGEGYIRISYA--TAYEKLEEAMDRMEKVLKEK 386 (389)
T ss_pred CCCHHHHHHHHHHHCCEEEECCHHHC--CCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHC
T ss_conf 98999999999982999998673338--899897999971--99999999999999999855
No 183
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.87 E-value=4.3e-20 Score=145.41 Aligned_cols=334 Identities=18% Similarity=0.233 Sum_probs=208.6
Q ss_pred EEEE-CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH----HHHHHCCCCCEEEEC-CCCHHH
Q ss_conf 6898-0344656677988999999999986378688722443688589999999----984012888516741-660245
Q gi|254780486|r 30 DIWD-FTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEE----EAADFFGFEKMLYFG-SGYAAN 103 (381)
Q Consensus 30 ~~l~-f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~----~lA~~~g~e~al~~~-sG~~An 103 (381)
+.|+ -+|-|| .+|.+.++.---+..+|.-|..|-|...|+ +...++|. +..++|+.+.|-+-| ||..||
T Consensus 26 ~~l~LIaSEN~----~S~~v~~a~gS~l~nkYaEG~pg~RyY~G~-~~iD~iE~la~~ra~~lF~a~~anVqp~SGs~AN 100 (415)
T PRK00011 26 EHIELIASENF----VSPAVMEAQGSVLTNKYAEGYPGKRYYGGC-EYVDVVEQLAIDRAKKLFGAEYANVQPHSGSQAN 100 (415)
T ss_pred CCCEEECCCCC----CCHHHHHHHCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH
T ss_conf 29648537774----799999986472227577889984245665-2699999999999999838986056778639999
Q ss_pred HHHHHHHCCCCCCCCHHHHCCHH-HHHHHHHC--C--CCCEEECC------CCHHHHHHHHHHHHHCCCCCCCEEEECCC
Q ss_conf 65566631689710045420267-75266640--8--76403056------88147899764310002478607971462
Q gi|254780486|r 104 MAILSTLPQATDLIVYDKLVHAS-IREGINSG--K--AQAIAIPH------NNINSFAENINKWRKSGGKGFPWIVVESI 172 (381)
Q Consensus 104 ~~~i~~l~~~~d~ii~D~~~HaS-i~~g~~ls--~--a~~~~f~H------nD~~~Le~~l~~~~~~~~~~~~~vv~egv 172 (381)
++++.+|.+|||.|+.=.+.|.- +-.|.+.+ + -+.+.|+- -|++.++++.++.+. +.+|+--+.
T Consensus 101 ~av~~all~PGD~im~l~l~~GGHltHg~~~~~~~~~~~~~~y~~d~~~~~IDyd~~~~~a~~~kP-----klIi~G~S~ 175 (415)
T PRK00011 101 AAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDEVEKLALEHKP-----KLIIAGASA 175 (415)
T ss_pred HHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHHCC-----CEEEECCCC
T ss_conf 999999627898587668666787657867554465247898678643481679999999986099-----889964613
Q ss_pred CCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCC-CCEEEEEECCCCCCCCC
Q ss_conf 15766134689999986313608986131122234777640110000134652100134656-53026752451001000
Q gi|254780486|r 173 YSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKAL-GSSGALVGSNKIIYDYL 251 (381)
Q Consensus 173 ~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~-g~~GG~i~~~~~ii~~l 251 (381)
|+- ..|.++++++|++.|++|++|=||-.|.+ ..| . ...+...-+++++|--|.| |-.||.|++++++.+.+
T Consensus 176 y~r---~~d~~~~reIad~vgA~l~~D~aHi~GLI-A~g--~-~~~Pl~~ADvvt~tTHKTlrGPrGGiIl~~~e~~~kI 248 (415)
T PRK00011 176 YSR---PIDFKKFREIADEVGAYLMVDMAHIAGLV-AAG--V-HPNPVPHADVVTTTTHKTLRGPRGGLILTNEELAKKI 248 (415)
T ss_pred CCC---CCCHHHHHHHHHHHCCEEEEEHHHHHHHH-HCC--C-CCCCCCCCEEEECCCCCCCCCCCCEEEEECCHHHHHH
T ss_conf 533---12889999999970988994535566666-433--3-7996677568854533467898860797340666665
Q ss_pred CCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHH-HHHCCCCC---CCCCCEEEEEECCHH-HHHH
Q ss_conf 0121100001357750257898878988627-1022478999999998-76417978---998972899958979-9999
Q gi|254780486|r 252 INYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDK-IANKKIGF---SSQSHIQSIVIGDNK-SCLN 325 (381)
Q Consensus 252 ~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~-~~~~~~g~---~~~s~I~~v~~gd~~-~a~~ 325 (381)
...--|.+.+++..-..++-+.+-.|.+..+ ..-.++..+|++.+.+ +...++.+ -+++|.+-|-+.... ....
T Consensus 249 d~aVFPg~qggph~h~iAa~Aval~Ea~~~~f~~Ya~qVv~NAk~La~~L~~~G~~vv~ggTdnHlvlvdl~~~g~~G~~ 328 (415)
T PRK00011 249 NSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALQERGFKVVSGGTDNHLVLVDLRKKGLTGKD 328 (415)
T ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEECCCCCCCHHH
T ss_conf 41207531468047789999999999847418999999999999999999768977971798774477645645688999
Q ss_pred HHHHHHHCCEEEEEECCC---CCCCCCCEEEEEC----CCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 999999779189862288---8888870399962----878999999999999999988738
Q gi|254780486|r 326 IAKNLQKKGFDIRAIRPP---TVPINTARLRISI----TLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 326 ~~~~L~~~Gi~v~~i~~P---tVp~~~~rlRi~v----~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
+.+.|.+.||.++--.-| .-|...+.||+-. +....++|+++..+.|.+++...+
T Consensus 329 a~~~Le~~gI~vNkn~iP~d~~~~~~~SGiRiGt~a~TtrG~~e~em~~ia~~I~~~l~~~~ 390 (415)
T PRK00011 329 AEAALEEANITVNKNAIPFDPRSPFVTSGIRIGTPAITTRGFKEAEMEEIAELIADVLDNPE 390 (415)
T ss_pred HHHHHHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 99999985908755879899999888860143678897489988999999999999983789
No 184
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.87 E-value=2.8e-20 Score=146.55 Aligned_cols=268 Identities=19% Similarity=0.154 Sum_probs=177.9
Q ss_pred HHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 999999997598399928976898034465667798899999999998637868-8722443688589999999984012
Q gi|254780486|r 10 EERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIG-SGGSRLLCGNYNQHLELEEEAADFF 88 (381)
Q Consensus 10 ~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~-~~~sr~~~G~~~~~~~lE~~lA~~~ 88 (381)
-+.|.+-.+++...--++|++- |-.-.|.+.+-.-+.+- ++-+. ..+-=.+.-...+..+.|+.+|+.+
T Consensus 3 ~~aL~~y~~~~~~~fh~PGHk~---------g~~~~~~~~~~~g~~~~-~~D~te~~~lD~L~~p~g~I~eAq~laA~~~ 72 (294)
T cd00615 3 FEALKEYAKRGIISFHVPGHKG---------GRGFRKSFYEFYGENLF-KADVTELTGLDDLLDPTGPIKEAQELAARAF 72 (294)
T ss_pred HHHHHHHHHCCCCEEECCCCCC---------CCCCCHHHHHHHHCCHH-HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 8999999818992374697789---------87768889998701201-1013588889898898719999999999983
Q ss_pred CCCCEEEECCC-CHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC-----------CCCHHHHHHHHHHH
Q ss_conf 88851674166-0245655666316897100454202677526664087640305-----------68814789976431
Q gi|254780486|r 89 GFEKMLYFGSG-YAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP-----------HNNINSFAENINKW 156 (381)
Q Consensus 89 g~e~al~~~sG-~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~-----------HnD~~~Le~~l~~~ 156 (381)
|.+.+.+...| +.+|++++.++++++|.|++|+++|-|++.|+.++++.-+... --+.+++++.++++
T Consensus 73 ga~~s~flvnGsT~g~~a~i~a~~~~gd~vlv~RN~HkSv~~gl~l~g~~Pvyl~p~~~~~~gi~~~i~~~~~~~al~~~ 152 (294)
T cd00615 73 GAKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGLVLSGAVPVYLKPERNPYYGIAGGIPPETFKKALIEH 152 (294)
T ss_pred CCCCEEEEECCHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHC
T ss_conf 99966998277269999999983289998998265189999999986984899606435556953899999999999858
Q ss_pred HHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCC
Q ss_conf 00024786079714621576613468999998631360898613112223477764011000013465210013465653
Q gi|254780486|r 157 RKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGS 236 (381)
Q Consensus 157 ~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~ 236 (381)
++.+.+++|..-| +|.+.++++|.++|+++|..|+||||||- +-.....+........-++++.|.-|.+++
T Consensus 153 ----p~~kav~lt~PtY--~G~~~Dl~~i~~~~h~~~~~llVDEAhGa--h~~F~~~lp~~a~~~GAD~vv~S~HKtL~a 224 (294)
T cd00615 153 ----PDAKAAVITNPTY--YGICYNLRKIVEEAHHRGLPVLVDEAHGA--HFRFHPILPSSAAMAGADIVVQSTHKTLPA 224 (294)
T ss_pred ----CCCCEEEEECCCC--CEEEECHHHHHHHHHHCCCEEEEECCCHH--HHHCCCCCCCCHHHCCCEEEEECHHHCCCC
T ss_conf ----9965899977998--87766899999998404997999775403--443187787556666963999623214533
Q ss_pred --EEEEEECCCCCCC--CCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHH
Q ss_conf --0267524510010--000121100001357750257898878988627-10224789999999
Q gi|254780486|r 237 --SGALVGSNKIIYD--YLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINIT 296 (381)
Q Consensus 237 --~GG~i~~~~~ii~--~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~ 296 (381)
+++++-...+.++ .++ .+-....||+++.+.++..-.+..++.++ .++.+++.+.+..+
T Consensus 225 ltQ~s~lh~~~~~v~~~~l~-~~l~~~qTTSPSYllmASlD~ar~~~~~~G~~l~~~~l~~a~~~ 288 (294)
T cd00615 225 LTQGSMIHVKGDLVNPDRVN-EALNLHQSTSPSYLILASLDVARAMMALEGKELVEELIELALYA 288 (294)
T ss_pred CCHHHHEEECCCCCCHHHHH-HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 22253202379968999999-99998838875899999999999999999999999999999999
No 185
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.87 E-value=4.6e-19 Score=138.98 Aligned_cols=341 Identities=12% Similarity=0.055 Sum_probs=192.0
Q ss_pred HHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 999999999759839992897689803446566779889999999999863786-8872244368858999999998401
Q gi|254780486|r 9 YEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPI-GSGGSRLLCGNYNQHLELEEEAADF 87 (381)
Q Consensus 9 ~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~-~~~~sr~~~G~~~~~~~lE~~lA~~ 87 (381)
+.++..++++ .|+++++|+--| -.|...+.+++++.+++. ...+ |.+.++ |..++.+.+-+.+.+.
T Consensus 18 ~~~~~~~~~~--------~G~~vi~l~iG~-pdf~~P~~i~~a~~~a~~-~~~~~gY~~~~---G~~~lR~aIa~~~~~~ 84 (388)
T PRK07366 18 MDRAKAQARA--------AGKEVIDLSLGS-SDLPAPAHALEAIAQSLQ-DPSTHGYLLFH---GTLPFREAAAAWYEQR 84 (388)
T ss_pred HHHHHHHHHH--------CCCCEEECCCCC-CCCCCCHHHHHHHHHHHH-CCCCCCCCCCC---CCHHHHHHHHHHHHHH
T ss_conf 9999999985--------899849870868-999988999999999980-97676789875---7899999999999999
Q ss_pred CCCC----CEEEECCCC-HHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC---CC----CHHHHHHHHHH
Q ss_conf 2888----516741660-245655666316897100454202677526664087640305---68----81478997643
Q gi|254780486|r 88 FGFE----KMLYFGSGY-AANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP---HN----NINSFAENINK 155 (381)
Q Consensus 88 ~g~e----~al~~~sG~-~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~---Hn----D~~~Le~~l~~ 155 (381)
+|.+ .-++..+|. .|...++.++++|||.|+.-.=.-.+....+++.+++++.++ .| |+++|++.+..
T Consensus 85 ~g~~~~pe~~V~~t~G~~~al~~~~~al~~pGD~Vli~~P~Y~~y~~~~~~~G~~~~~vpl~~~~~~~~d~~~l~~~i~~ 164 (388)
T PRK07366 85 FGLAVDPETEVLPLIGSQEGTAHLPLALLNPGDFALLLDPGYPSHAGGVYLAGGQIYPMPLRAENDFLPVFADIPTEVLA 164 (388)
T ss_pred HCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHHHH
T ss_conf 78988988739984788999999999966999989982587765189999859857997546667984799999874042
Q ss_pred HHHCCCCCCCEEEECCCCCCCCCH---HHHHHHHHHHHHCCEEEEECCCCCCCCCCC-CCC-EEEEEHHCCCCCCCCCCC
Q ss_conf 100024786079714621576613---468999998631360898613112223477-764-011000013465210013
Q gi|254780486|r 156 WRKSGGKGFPWIVVESIYSMDGDK---APLDDLVKIANDYDGFIVVDEAHATGVCGP-LGK-GLTHIIEERNNVIVMHSC 230 (381)
Q Consensus 156 ~~~~~~~~~~~vv~egv~Sm~G~~---apL~~i~~l~~~y~~~LivDEah~~Gv~G~-~G~-G~~~~~~~~~~~iv~~Tl 230 (381)
+.+.+|+.-.-.. .|.+ ..|++|.++|++||++++.||+|+--++.. .-. .+..........|.+.||
T Consensus 165 ------~tk~iil~~P~NP-TG~v~s~~~l~~i~~~a~~~~i~lisDEiY~~l~~~~~~~~p~~~~~~~~~~~~i~~~S~ 237 (388)
T PRK07366 165 ------QARLMVLSYPHNP-TTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEVEPPSILQADPEKSVSIEFFTL 237 (388)
T ss_pred ------CCCEEEECCCCCC-CCEEEEHHHHHHHHHHHHHCCEEEECCCEEEEEEECCCCCCCHHHHCCCCCCEEEEEECC
T ss_conf ------2829998589898-466803888888999874055078622021445866876661354257220617997335
Q ss_pred CCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCCCCC
Q ss_conf 46565302---67524510010000121100001357750257898878988627-102247899999999876417978
Q gi|254780486|r 231 SKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKKIGF 306 (381)
Q Consensus 231 sKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~~g~ 306 (381)
||+|+..| ||+.+++++++.+++......++ .++....++.+++..-++. .+.++.++++...+... ....|+
T Consensus 238 SK~f~~~G~RiG~~i~~~~li~~~~~~~~~~~~~--~~~~~~~~a~~al~~~~~~~~~~~~~~~~rr~~~~~~-L~~~g~ 314 (388)
T PRK07366 238 SKSYNMGGFRIGFAIGNAQLIAALRQIKAVVDFN--QYRGILNGAIAALTGPQACVQQTVQIFRQRRDAFINA-LHRIGW 314 (388)
T ss_pred CCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCCC--CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH-HHHCCC
T ss_conf 3257887651899967999999999998754765--4399999999999688899999999999999999999-997798
Q ss_pred CCCCC----EEEEEECCH--HHHHHHHHHHH-HCCEEEEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99897----289995897--99999999999-7791898622-88888887039996287899999999999999998
Q gi|254780486|r 307 SSQSH----IQSIVIGDN--KSCLNIAKNLQ-KKGFDIRAIR-PPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 307 ~~~s~----I~~v~~gd~--~~a~~~~~~L~-~~Gi~v~~i~-~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
....| .+.+.+++. ....+++.+|+ +.||.+.|.. | -+.+...+||+.. .+++.+++.++.|++.+
T Consensus 315 ~~~~P~g~~y~w~~l~~~~~~~~~ef~~~Ll~~~gV~v~PG~~F--g~~g~g~iRl~~a--~~~~~l~eal~Rl~~~l 388 (388)
T PRK07366 315 PVPLPEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPGSGF--GKSGEGYVRFALV--HDPDILEEAVERIAAFL 388 (388)
T ss_pred EEECCCEEEEEEEECCCCCCCCHHHHHHHHHHHCCEEEECCHHH--CCCCCCEEEEEEC--CCHHHHHHHHHHHHHHC
T ss_conf 75079857799787898788998999999998399999766465--8899986999962--99999999999999869
No 186
>PRK07908 hypothetical protein; Provisional
Probab=99.87 E-value=2.1e-19 Score=141.06 Aligned_cols=310 Identities=15% Similarity=0.189 Sum_probs=178.4
Q ss_pred CCCEEEECCCCC-CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH--HHHHHHHHHHHHCCCC-CEEEECCCCHH
Q ss_conf 897689803446-5667798899999999998637868872244368858--9999999984012888-51674166024
Q gi|254780486|r 27 RRQDIWDFTSHD-YLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYN--QHLELEEEAADFFGFE-KMLYFGSGYAA 102 (381)
Q Consensus 27 ~~~~~l~f~s~d-YLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~--~~~~lE~~lA~~~g~e-~al~~~sG~~A 102 (381)
.+..+||||+|. -+| --|.+.+++.+++.. . ..|.+ -+.+|-+.||+++|.+ +-+++..|-.-
T Consensus 19 ~~pgiidlS~n~np~g--pp~~v~~al~~a~~~-~----------~~YP~~~~~~~Lr~aiA~~~gv~~d~I~~gnGs~E 85 (346)
T PRK07908 19 AAPGLLDFAVNVRADR--PPEWLRERLAARLPD-L----------ARYPSTEDVRRARAAVAARHGRTRDEVLLLAGAAE 85 (346)
T ss_pred CCCCCEECCCCCCCCC--CCHHHHHHHHHHCCC-C----------CCCCCCCCHHHHHHHHHHHHCCCHHHEEEECCHHH
T ss_conf 8999778889999989--799999999975554-6----------68939865699999999997858899987437999
Q ss_pred HHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCC-CHHHHHHHHHHHHHCCCCCCCEEEEC-CCCCCCCCHH
Q ss_conf 565566631689710045420267752666408764030568-81478997643100024786079714-6215766134
Q gi|254780486|r 103 NMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHN-NINSFAENINKWRKSGGKGFPWIVVE-SIYSMDGDKA 180 (381)
Q Consensus 103 n~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~Hn-D~~~Le~~l~~~~~~~~~~~~~vv~e-gv~Sm~G~~a 180 (381)
.+..+..+ .+++.++.+. ....-...++..++++..+.-. |.+ + ...... .+.+ +|++. .=.. +|.+.
T Consensus 86 ~i~~l~~~-~~~~~vi~~P-~f~~y~~~~~~~g~~v~~v~l~~~~~-l--d~~ai~---~~~~-lv~l~nPnNP-TG~~~ 155 (346)
T PRK07908 86 GFALLARL-LPRRAAVVHP-SFTEPEAALRAAGIPVHRVVLDPPFR-L--DPAAVP---DDAD-LVVVGNPTNP-TSVLH 155 (346)
T ss_pred HHHHHHHH-CCCCEEEECC-CCHHHHHHHHHCCCCEEEEECCCCCC-C--CHHHCC---CCCC-EEEECCCCCC-CCCCC
T ss_conf 99999997-4899699788-85799999998699259950798666-8--965767---6789-8997999798-77867
Q ss_pred HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCC
Q ss_conf 6899999863136089861311222347776401100001346521001346565302---6752451001000012110
Q gi|254780486|r 181 PLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKP 257 (381)
Q Consensus 181 pL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~ 257 (381)
+.++|.++++. +.++++|||+.--+.|..- .. .....+++|++.||||+||..| ||+++++++++.++..-.+
T Consensus 156 ~~e~l~~l~~~-~~~lVvDEaY~df~~~~~~-s~--~~~~~~nvivlrSfSK~yglaGlRiGy~va~~~~i~~l~~~~~~ 231 (346)
T PRK07908 156 PAEQLLALRRP-GRILVVDEAFADAVPGEPE-SL--AGDALPDLLVLRSLTKTWSLAGLRVGYALGAPELLARLTAQRAH 231 (346)
T ss_pred CHHHHHHHHCC-CCEEEEEHHHHHCCCCCCH-HH--HHHCCCCEEEEECHHHHHCCCHHHHEEEECCHHHHHHHHHHCCC
T ss_conf 89999998534-9899995115432589713-44--44248988999243576257725513211699999999982778
Q ss_pred EECCCCCCCCHHHHHHHHH--HHHHHCCCHHHHHHHHH-HHHHHHHHCCCCC----CCCCCEEEEEECCHHHHHHHHHHH
Q ss_conf 0001357750257898878--98862710224789999-9999876417978----998972899958979999999999
Q gi|254780486|r 258 FIYTTSPSPILAVVACEAL--KLIKRKPALHKSLLQLI-NITDKIANKKIGF----SSQSHIQSIVIGDNKSCLNIAKNL 330 (381)
Q Consensus 258 ~ifst~l~P~~~aaa~aal--~~l~~~~~~~~~l~~~~-~~~~~~~~~~~g~----~~~s~I~~v~~gd~~~a~~~~~~L 330 (381)
+- .+.+..+++.+.+ +-........+++.+.. .+.+.+ ..+|+ ++.++.+.+.+++. ..+.+.|
T Consensus 232 ~~----v~~~a~~a~~a~~~~~~~~~~~~~~~~~~~~R~~l~~~L--~~~g~~~~~ps~anF~l~~~~~a---~~~~~~L 302 (346)
T PRK07908 232 WP----LGTLQLEAIAACCAPRAVAEAAADAERLAALRAEMVAGL--RAVGAEVVDPGAAPFVLVRVPDA---ELVRKRL 302 (346)
T ss_pred CC----CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHH--HHCCCEECCCCCEEEEEEECCCH---HHHHHHH
T ss_conf 88----879999999999587568999999999999999999999--97788653899508999868999---9999999
Q ss_pred HHCCEEEEEE-CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9779189862-2888888870399962878999999999999999988
Q gi|254780486|r 331 QKKGFDIRAI-RPPTVPINTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 331 ~~~Gi~v~~i-~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
.++||+|++. .|| +.+...+||++. |+||.++++++|+++++
T Consensus 303 ~~~gIlVr~~~~f~--gl~~~~iRiav~---~~een~rli~aL~~il~ 345 (346)
T PRK07908 303 RERGIAVRRGDTFP--GLDPDYLRAAVR---PEWPVDRLVQAIAEILR 345 (346)
T ss_pred HCCCEEEEECCCCC--CCCCCEEEEEEC---CHHHHHHHHHHHHHHHC
T ss_conf 80895999788778--879898999838---89999999999999974
No 187
>pfam00266 Aminotran_5 Aminotransferase class-V. This domain is found in amino transferases, and other enzymes including cysteine desulphurase EC:4.4.1.-.
Probab=99.87 E-value=2.5e-19 Score=140.60 Aligned_cols=308 Identities=16% Similarity=0.178 Sum_probs=193.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCC--CCCCCCCHHHHHHHHHHHHHCCCC--CEEEE-CCCCHHHHHHHHHH---CCCCC
Q ss_conf 988999999999986378688722--443688589999999984012888--51674-16602456556663---16897
Q gi|254780486|r 44 SSTLLREKILSSLDSKIPIGSGGS--RLLCGNYNQHLELEEEAADFFGFE--KMLYF-GSGYAANMAILSTL---PQATD 115 (381)
Q Consensus 44 ~~p~v~~a~~~a~~~~~g~~~~~s--r~~~G~~~~~~~lE~~lA~~~g~e--~al~~-~sG~~An~~~i~~l---~~~~d 115 (381)
-.|.|++++.+.+.+.|+ ++.++ +.-.-..+..++.-+.+|+|+|.+ +-++| ++++.++-.++..+ .+++|
T Consensus 11 ~~~~V~~~~~~~~~~~~~-np~s~~~~~~~~~~~~~e~aR~~ia~~lga~~~~~i~ft~~~Te~~n~~~~~~~~~~~~gd 89 (371)
T pfam00266 11 KPQAVLDALQEYYTDYNG-NVHRGVHHLGKEATQAYEEAREKVAEFINAPSDEEIIFTSGTTEAINLVAISLGRRLKPGD 89 (371)
T ss_pred CCHHHHHHHHHHHHHCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 999999999999986488-8565214999999999999999999971939989799848878998876523453149989
Q ss_pred CCCHHHHCCHHHHHHH----HHCCCCCEEECC-----CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHH
Q ss_conf 1004542026775266----640876403056-----8814789976431000247860797146215766134689999
Q gi|254780486|r 116 LIVYDKLVHASIREGI----NSGKAQAIAIPH-----NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLV 186 (381)
Q Consensus 116 ~ii~D~~~HaSi~~g~----~ls~a~~~~f~H-----nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~ 186 (381)
.|+.-...|.|..... +-.+++++.++- -|++++++.+. +.+.+|++-.+-+..|.+.|+++|.
T Consensus 90 ~ii~s~~eh~s~~~~~~~l~~~~g~~v~~i~~~~~g~i~~~~l~~~i~-------~~t~lv~~~~v~n~tG~~~pi~~i~ 162 (371)
T pfam00266 90 EILVTEMEHHANLVPWQELAKRTGATVRVIPVDPNGLLDLDALEKLLT-------PRTKLVAITHVSNVTGTVNPVEEIG 162 (371)
T ss_pred EEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCC-------CCCEEEEEECCCCCCCEECHHHHHH
T ss_conf 999954775523659999876249569993569898698999998568-------9964999967667788240555699
Q ss_pred HHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE-EEEECCCCCCCCCCC--CCC-------
Q ss_conf 9863136089861311222347776401100001346521001346565302-675245100100001--211-------
Q gi|254780486|r 187 KIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG-ALVGSNKIIYDYLIN--YAK------- 256 (381)
Q Consensus 187 ~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G-G~i~~~~~ii~~l~~--~~~------- 256 (381)
++|+++|++++||-+|++|.+- -.....+.++++.+.-|-+|..| |++..++++.+.+.- .+.
T Consensus 163 ~~~~~~g~~~~vDa~q~~g~~~-------id~~~~g~D~~~~s~hK~~GP~G~G~L~v~~~~~~~l~p~~~g~~~~~~~~ 235 (371)
T pfam00266 163 KLAHEYGALVVVDAAQAVGHRP-------IDVQALGVDFLAFSGHKLYGPTGIGVLYGRRDLLEKLPPWKGGGGMIDLVS 235 (371)
T ss_pred HHHHHCCCEEEEECCCCCCCCC-------CCCCCCCCCEEEEECCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCCCCCC
T ss_conf 9986369179987512367522-------032324365699865556899843999981577845787567998435654
Q ss_pred ----------CEECC-CCCCCCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCC---C-----CCCCCEEEE
Q ss_conf ----------00001-357750257898878988627--10224789999999987641797---8-----998972899
Q gi|254780486|r 257 ----------PFIYT-TSPSPILAVVACEALKLIKRK--PALHKSLLQLINITDKIANKKIG---F-----SSQSHIQSI 315 (381)
Q Consensus 257 ----------~~ifs-t~l~P~~~aaa~aal~~l~~~--~~~~~~l~~~~~~~~~~~~~~~g---~-----~~~s~I~~v 315 (381)
+..|- +..+.+..++..++++.+.+. +...++...+.+++.+.. ..++ + +..++|+.+
T Consensus 236 ~~~~~~~~~~~~~~e~GT~n~~~~~~l~~al~~~~~~g~~~i~~~~~~L~~~l~~~L-~~~~~~~i~~~~~~~~~~ivsf 314 (371)
T pfam00266 236 LLQETTFADAPSKFEAGTPNIAGIIGLGAALDYLAEIGLEAIEKHERELAAYLYERL-LAIPGIRLVPAVAERRPSIISF 314 (371)
T ss_pred CCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-HCCCCEEEECCCCCCCCCEEEE
T ss_conf 222355456144404789987889999999999998198999999999999999998-5599989949862466888999
Q ss_pred EECCHHHHHHHHHHHHHCCEEEEEECC---CCC-C-CCCCEEEEECCCCCCHHHHHHH
Q ss_conf 958979999999999977918986228---888-8-8870399962878999999999
Q gi|254780486|r 316 VIGDNKSCLNIAKNLQKKGFDIRAIRP---PTV-P-INTARLRISITLNVDEPTIVKL 368 (381)
Q Consensus 316 ~~gd~~~a~~~~~~L~~~Gi~v~~i~~---PtV-p-~~~~rlRi~v~a~~t~edi~~~ 368 (381)
.+.. .....+...|.++||.++.-.. |.. . ...+.||++++..+|+||||++
T Consensus 315 ~~~~-~~~~~~~~~L~~~gI~vs~G~~Cs~~~l~~~~~~g~iRiS~~~ynT~eeId~L 371 (371)
T pfam00266 315 NFPG-VHPHDVATLLDERGIAVRSGHHCAQPLMERLGVHGTLRASLYFYNTEEEVDRL 371 (371)
T ss_pred EECC-CCHHHHHHHHHHCCEEEECCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHCC
T ss_conf 9599-09999999973488199764000324448767998899976887999998259
No 188
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.87 E-value=1.4e-19 Score=142.20 Aligned_cols=322 Identities=12% Similarity=0.136 Sum_probs=178.0
Q ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC---C-EEEECCCCHHH-H
Q ss_conf 68980344656677988999999999986378688722443688589999999984012888---5-16741660245-6
Q gi|254780486|r 30 DIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE---K-MLYFGSGYAAN-M 104 (381)
Q Consensus 30 ~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e---~-al~~~sG~~An-~ 104 (381)
+++||+-.|=. +...|.+++|..+++.+. .+.+-+ .|+.++-+++-+.+.+.+|.+ + -+++.+|.... .
T Consensus 1 ~ii~l~~g~P~-~p~P~~i~~al~~a~~~~--~~Y~~~---~G~~~lR~aia~~~~~~~g~~~~~d~~I~~t~Ga~~al~ 74 (350)
T TIGR03537 1 RLFDFGTGDPK-EPTPPIIRNALKNAVPEV--SQYPSA---AGTKALRDAISGWFERRFGVKLDPDAQVLPSAGSKEAIF 74 (350)
T ss_pred CEEECCCCCCC-CCCCHHHHHHHHHHCCCC--CCCCCC---CCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHH
T ss_conf 95787698999-998799999999960215--899898---474999999999999986899897877998788389999
Q ss_pred HHHHHHCCCCC---CCCHHHHCCHHHHHHHHHCCCCCEEECC-------CCHHHHHHHHHHHHHCCCCCCCEEEECCCCC
Q ss_conf 55666316897---1004542026775266640876403056-------8814789976431000247860797146215
Q gi|254780486|r 105 AILSTLPQATD---LIVYDKLVHASIREGINSGKAQAIAIPH-------NNINSFAENINKWRKSGGKGFPWIVVESIYS 174 (381)
Q Consensus 105 ~~i~~l~~~~d---~ii~D~~~HaSi~~g~~ls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~~~~vv~egv~S 174 (381)
.++.++..++| .|+...=........+++.+++++.++= -|++++++.+.+ +.+.+++...=..
T Consensus 75 ~~~~~~~~~gd~~~~Vlv~~P~y~~y~~~~~~~g~~~~~v~l~~~~g~~~d~e~l~~~~~~------~~~~i~l~nP~NP 148 (350)
T TIGR03537 75 HFPLVFIDPEEDRRRVIFGTPGYPVYERGALFAGGEPTPVKLKEEDGFLLRLEKVDKEILK------ETKIVWINYPHNP 148 (350)
T ss_pred HHHHHHCCCCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCCC------CCEEEEECCCCCC
T ss_conf 9999973888778769994698730699999769989997535544887799999974666------8719998999898
Q ss_pred CCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCC
Q ss_conf 766134---6899999863136089861311222347776401100001346521001346565302---6752451001
Q gi|254780486|r 175 MDGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIY 248 (381)
Q Consensus 175 m~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii 248 (381)
.|.+- .+++|+++|++||++++.||+|+--++|..-....+ ...+++|++.||||.|+..| ||+.++++++
T Consensus 149 -TG~v~s~~~l~~l~~~a~~~~~~vi~DE~Y~~l~~~~~~~~~~~--~~~~~~i~~~S~SK~~~~pGlR~G~~~~~~~li 225 (350)
T TIGR03537 149 -TGAVAPRSYLEETIAICQEHNIILCSDECYTEIYFGEPPHSALE--VGMENVLAFHSLSKRSGMTGYRSGFVAGDEKLI 225 (350)
T ss_pred -CCCCCCHHHHHHHHHHHHCCCEEEEEEHHHHHHHCCCCCCCHHH--HCCCCEEEEECCCCCCCCCCCEEEEEECCHHHH
T ss_conf -36476999999999863236907984312245534899877556--346877999667545046775599997899999
Q ss_pred CCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHH-HHHCCCCC-CC-CCCEEEEEECCHHH
Q ss_conf 000012110000135775025789887898862710---22478999999998-76417978-99-89728999589799
Q gi|254780486|r 249 DYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPA---LHKSLLQLINITDK-IANKKIGF-SS-QSHIQSIVIGDNKS 322 (381)
Q Consensus 249 ~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~---~~~~l~~~~~~~~~-~~~~~~g~-~~-~s~I~~v~~gd~~~ 322 (381)
+.++.....+ +.+.|....+++.++++ ++.. .++.++++.....+ +...++.+ .+ .+..+-+.+.+...
T Consensus 226 ~~~~~~~~~~--~~~~~~~~q~a~~~~~~---~~~~~~~~~~~~~~~r~~~~~~l~~~g~~~~~p~g~~~~w~~~~~~~~ 300 (350)
T TIGR03537 226 SFLKKLRANF--GVASPDFVQAAAKAAWS---DDSHVIERRKIFRRKRDLFLEFFNKKGLEYLYPDATFYLWVKVPNGIS 300 (350)
T ss_pred HHHHHHHHHC--CCCHHHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEEECCCCCC
T ss_conf 9999986206--77728999999999956---809999999999999999999986489888268822599897999989
Q ss_pred HHHHHHHHHHCCEEEEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 9999999997791898622-8888888703999628789999999999999999
Q gi|254780486|r 323 CLNIAKNLQKKGFDIRAIR-PPTVPINTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 323 a~~~~~~L~~~Gi~v~~i~-~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
..+++++|+++||.+.+-. | -+.+...+|+++. .+.|+|++.+..|++|
T Consensus 301 ~~~~~~~ll~~gV~v~pG~~F--g~~~~~~~Rl~~~--~~~e~l~ealrrl~~v 350 (350)
T TIGR03537 301 SKDYALRLLENGIVVAPGENF--GSGEEGYVRVALV--PTLEECEEALRIWESI 350 (350)
T ss_pred HHHHHHHHHHCCEEEECCHHH--CCCCCCEEEEEEE--CCHHHHHHHHHHHHCC
T ss_conf 999999999799899767311--8999986999972--8999999999998619
No 189
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.87 E-value=1.3e-19 Score=142.30 Aligned_cols=329 Identities=18% Similarity=0.246 Sum_probs=206.7
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH----HHHHCCCCCEEEEC-CCCHHHHHHHH
Q ss_conf 03446566779889999999999863786887224436885899999999----84012888516741-66024565566
Q gi|254780486|r 34 FTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEE----AADFFGFEKMLYFG-SGYAANMAILS 108 (381)
Q Consensus 34 f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~----lA~~~g~e~al~~~-sG~~An~~~i~ 108 (381)
.+|-|| .+|.+.++.---+..+|..|..|.|...|+ ....++|.. ..++|+.+.|-+-| ||..||++++.
T Consensus 25 IaSEN~----~S~~v~~a~gS~ltnkYaeG~pg~Ryy~G~-~~iD~iE~la~~rak~LF~a~~anVqp~SGs~AN~av~~ 99 (402)
T cd00378 25 IASENF----TSPAVMEAMGSDLTNKYAEGYPGKRYYGGC-EYVDEIEDLAIERAKKLFGAEYANVQPHSGSQANLAVYF 99 (402)
T ss_pred ECCCCC----CCHHHHHHHCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 557664----799999985673015476889986466766-259999999999999983898747587873999999999
Q ss_pred HHCCCCCCCCHHHHC------CHHHHHHHHHCCC--CCEEEC---CC---CHHHHHHHHHHHHHCCCCCCCEEEECCCCC
Q ss_conf 631689710045420------2677526664087--640305---68---814789976431000247860797146215
Q gi|254780486|r 109 TLPQATDLIVYDKLV------HASIREGINSGKA--QAIAIP---HN---NINSFAENINKWRKSGGKGFPWIVVESIYS 174 (381)
Q Consensus 109 ~l~~~~d~ii~D~~~------HaSi~~g~~ls~a--~~~~f~---Hn---D~~~Le~~l~~~~~~~~~~~~~vv~egv~S 174 (381)
+|.+|+|.|+.=.+. |.+.- -+..++- ...+|. ++ |++.++++.++.+. +.+|+--+.|+
T Consensus 100 all~pGD~il~l~l~~GGHltHg~~~-~v~~~g~~~~~~~Y~vd~~~~~IDyd~~~~~a~~~kP-----klIi~G~S~y~ 173 (402)
T cd00378 100 ALLEPGDTIMGLDLSHGGHLTHGSFT-KVSASGKLFESVPYGVDPETGLIDYDALEKMALEFKP-----KLIVAGASAYP 173 (402)
T ss_pred HHHCCCCEEEEECCCCCCCCCCCCCC-CCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHCCC-----CEEEECCCCCC
T ss_conf 97279998998664347775667787-7202135678896324556587189999999986599-----69997771565
Q ss_pred CCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCC-CCEEEEEECCC-CCCCCCC
Q ss_conf 766134689999986313608986131122234777640110000134652100134656-53026752451-0010000
Q gi|254780486|r 175 MDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKAL-GSSGALVGSNK-IIYDYLI 252 (381)
Q Consensus 175 m~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~-g~~GG~i~~~~-~ii~~l~ 252 (381)
- ..|.++++++|++.|++|++|=||-.|.+ ..| . ...+...-+++++|--|.| |-.||.|++++ ++.+.+.
T Consensus 174 r---~~d~~~~reIad~vgA~l~~D~aHi~GLI-A~g--~-~p~Pl~~ADvvt~tTHKTlrGPrGGiIl~~~~~~~~kId 246 (402)
T cd00378 174 R---PIDFKRFREIADEVGAYLLVDMAHVAGLV-AGG--V-FPNPLPGADVVTTTTHKTLRGPRGGLILTRKGELAKKIN 246 (402)
T ss_pred C---CCCHHHHHHHHHHCCCEEEEEHHHHHHHE-ECC--C-CCCCCCCCEEEECCCCCCCCCCCCEEEEECCHHHHHHHH
T ss_conf 6---55889999999870988985501234430-356--5-799768765774464345789984089954278998854
Q ss_pred CCCCCEECCCCCCCCHHHHHHHHHHHHH-HCCCHHHHHHHHHHHHHH-HHHCCCC---CCCCCCEEEEEECCH-HHHHHH
Q ss_conf 1211000013577502578988789886-271022478999999998-7641797---899897289995897-999999
Q gi|254780486|r 253 NYAKPFIYTTSPSPILAVVACEALKLIK-RKPALHKSLLQLINITDK-IANKKIG---FSSQSHIQSIVIGDN-KSCLNI 326 (381)
Q Consensus 253 ~~~~~~ifst~l~P~~~aaa~aal~~l~-~~~~~~~~l~~~~~~~~~-~~~~~~g---~~~~s~I~~v~~gd~-~~a~~~ 326 (381)
..--|.+-+++..-..++-+.+-.|.+. .-....++..+|++.+.+ +...++. -.+++|.+-|-+.+. ......
T Consensus 247 ~avfPg~qggph~h~iAa~Aval~Ea~~~~f~~Ya~qVv~NAkaLA~~L~~~G~~vv~ggTd~H~vlvd~~~~g~~G~~a 326 (402)
T cd00378 247 SAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERGFKVVSGGTDNHLVLVDLRPKGITGKAA 326 (402)
T ss_pred HHHCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCEEEEECCCCCCCHHHH
T ss_conf 65098644674566789999999998686689999999999999999998589479748998877999666456899999
Q ss_pred HHHHHHCCEEEEEECCCC---CCCCCCEEEEEC----CCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 999997791898622888---888870399962----878999999999999999988738
Q gi|254780486|r 327 AKNLQKKGFDIRAIRPPT---VPINTARLRISI----TLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 327 ~~~L~~~Gi~v~~i~~Pt---Vp~~~~rlRi~v----~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
.+.|.+.||.++-..-|- -|...+.|||-. +....++|++++.+.|.++++..+
T Consensus 327 ~~~Le~~gI~~Nkn~iP~d~~~~~~~sGiRiGT~a~T~rG~~e~em~~ia~lI~~~l~~~~ 387 (402)
T cd00378 327 EDALEEAGITVNKNTLPWDPSSPFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKDAE 387 (402)
T ss_pred HHHHHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 9999984908754748899999999976164778998589988999999999999981789
No 190
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.87 E-value=8.9e-20 Score=143.41 Aligned_cols=301 Identities=18% Similarity=0.211 Sum_probs=178.8
Q ss_pred CCCEEEECCCC-CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHH
Q ss_conf 89768980344-65667798899999999998637868872244368858999999998401288851674166024565
Q gi|254780486|r 27 RRQDIWDFTSH-DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMA 105 (381)
Q Consensus 27 ~~~~~l~f~s~-dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~ 105 (381)
+-.+.+||||| |=+|.. .|++. .+++ .+|+- .+..|++.+++++|.+..+ ...|...-+-
T Consensus 18 ~~~~iiDfSsNiNP~g~P-~~~~~---~~~~-~ryP~-------------~~~~L~~a~a~~~g~~~vl-~gnGs~e~I~ 78 (330)
T PRK05664 18 PLADWLDLSTGIAPWPWP-VPPIP---ADAW-ARLPE-------------TDDGLEAAARAYYGAPQLL-PVAGSQAAIQ 78 (330)
T ss_pred CHHHEEECCCCCCCCCCC-HHHHH---HHHH-HHCCC-------------CCHHHHHHHHHHCCCCCEE-EECCHHHHHH
T ss_conf 999915537888999998-68888---9999-87799-------------9689999999871997399-9416999999
Q ss_pred HHHHHCCCCCCCCHHHHCCHHHH-HHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHH
Q ss_conf 56663168971004542026775-26664087640305688147899764310002478607971462157661346899
Q gi|254780486|r 106 ILSTLPQATDLIVYDKLVHASIR-EGINSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDD 184 (381)
Q Consensus 106 ~i~~l~~~~d~ii~D~~~HaSi~-~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~ 184 (381)
++..+..++.+++... -.|.+ ..++..+++++.+ |.++++..+... ..+++.-.-. =+|.+.+..+
T Consensus 79 ll~~l~~~~~v~i~~P--tfseY~~a~~~~g~~v~~~---~~~~~~~~~~~~-------d~v~l~nPNN-PTG~~~~~~~ 145 (330)
T PRK05664 79 ALPRLRAPGRVGVLSP--CYAEHAHAWRRAGHQVREL---DEAEVEAALDSL-------DVLVVVNPNN-PTGRRFDPAR 145 (330)
T ss_pred HHHHHHCCCEEEECCC--CHHHHHHHHHHCCCEEEEC---CHHHHHHCCCCC-------CEEEECCCCC-CCCCCCCHHH
T ss_conf 9999748994688488--8799999999869988976---877776226788-------9899827928-8668989999
Q ss_pred H---HHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCE
Q ss_conf 9---99863136089861311222347776401100001346521001346565302---67524510010000121100
Q gi|254780486|r 185 L---VKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPF 258 (381)
Q Consensus 185 i---~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ 258 (381)
+ ++.|++.+++|+||||..- .. +.. .+.. ....++++++.||||+||..| ||+++++++++.++....||
T Consensus 146 l~~~~~~~~~~~~~lvvDEay~d-~~-~~~-s~~~-~~~~~nlivlrS~sK~~glaGlRlGy~~a~~~~i~~l~~~~~pw 221 (330)
T PRK05664 146 LLAWHARLAARGGWLVVDEAFMD-NT-PQH-SLAA-CAHRPGLIVLRSFGKFFGLAGARLGFVLAEPALLRALAELLGPW 221 (330)
T ss_pred HHHHHHHHHHCCCEEEEECHHHC-CC-CCH-HHHH-HCCCCCEEEEEECCHHHCCCCCCCEEHCCCHHHHHHHHHHCCCC
T ss_conf 99999986531988999753211-68-731-1466-33589989984044742685403020108999999999844999
Q ss_pred ECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH--HHCCCCCC-CCCCEEEEEECCHHHHHHHHHHHHHCCE
Q ss_conf 00135775025789887898862710224789999999987--64179789-9897289995897999999999997791
Q gi|254780486|r 259 IYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKI--ANKKIGFS-SQSHIQSIVIGDNKSCLNIAKNLQKKGF 335 (381)
Q Consensus 259 ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~--~~~~~g~~-~~s~I~~v~~gd~~~a~~~~~~L~~~Gi 335 (381)
+.+-+..+++.++|+ +.+..++....+.+.++++ .....|+. ..|...++++.. ..+..+.+.|+++||
T Consensus 222 ----~Vn~~a~~aa~aaL~---d~~~~~~~~~~l~~er~~l~~~L~~~g~~~~~s~anF~l~~~-~~a~~l~~~L~~~GI 293 (330)
T PRK05664 222 ----TVSGPTRWLAQAALA---DTPWQRQQRERLLAASQRLAALLRRHGLPPAGGCALFQWVRT-EDAAALHEFLARRGI 293 (330)
T ss_pred ----CCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCEEEEEEC-CCHHHHHHHHHHCCE
T ss_conf ----860999999999963---999999999999999999999999788842799536999625-999999999996994
Q ss_pred EEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 89862288888887039996287899999999999999998873
Q gi|254780486|r 336 DIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 336 ~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
+|+.+..| . .|||++.. ++++..++.++|..+.+|-
T Consensus 294 lVR~~~~~---~---~LRi~i~~--~e~~~~rL~~AL~~~~~~~ 329 (330)
T PRK05664 294 LTRLFEQP---P---SLRFGLPA--DEADWARLDQALLAYRKET 329 (330)
T ss_pred EEEECCCC---C---CEEEECCC--CHHHHHHHHHHHHHHHHHC
T ss_conf 99788999---9---77985798--8788999999999999730
No 191
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PMID:11123951), so we use this designation.
Probab=99.87 E-value=7.7e-19 Score=137.59 Aligned_cols=318 Identities=12% Similarity=0.076 Sum_probs=186.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHH---HHHHHHCCCC--CEEEE-CCCCHHHHHHHHHHC------
Q ss_conf 98899999999998637868872244368858999999---9984012888--51674-166024565566631------
Q gi|254780486|r 44 SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELE---EEAADFFGFE--KMLYF-GSGYAANMAILSTLP------ 111 (381)
Q Consensus 44 ~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE---~~lA~~~g~e--~al~~-~sG~~An~~~i~~l~------ 111 (381)
-.|+|+++..+.....|+. +++.- -.| ......+| +++|+|+|.. +-++| ++++.+|-.++..+.
T Consensus 11 ~~~~Vi~~~~~~~~~~~~N-p~s~h-~~~-~~a~~~~e~aR~~ia~~l~a~~~~eIvFTsg~Tea~N~~~~gl~~~~~~~ 87 (382)
T TIGR03403 11 LDPKVKELMDPFFCDIYGN-PNSLH-QFG-TATHPAIAEALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILK 87 (382)
T ss_pred CCHHHHHHHHHHHHHCCCC-CCHHH-HHH-HHHHHHHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999999999866899-63253-999-99999999999999997596997869993875899999999999998636
Q ss_pred CCCCCCCHHHHCCHHHHHHHH---HCCCCCEEECC-----CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHH
Q ss_conf 689710045420267752666---40876403056-----8814789976431000247860797146215766134689
Q gi|254780486|r 112 QATDLIVYDKLVHASIREGIN---SGKAQAIAIPH-----NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLD 183 (381)
Q Consensus 112 ~~~d~ii~D~~~HaSi~~g~~---ls~a~~~~f~H-----nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~ 183 (381)
+.++.|+.-..-|.|+....+ -.+.++...+- -|+++|++.+.. .+.+|.+-.+-...|.+.|++
T Consensus 88 ~~~~~ii~s~~EH~sv~~~~~~l~~~G~~v~~~~~d~~G~~d~~~l~~~l~~-------~T~LVai~~anN~tG~i~pv~ 160 (382)
T TIGR03403 88 GGKNHIITTEVEHPAVRATCAFLESLGVEVTYLPINEQGTITAEQVREAITE-------KTALVSVMWANNETGMIFPIK 160 (382)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCC-------CCCEEEEECCCCCCCCCCCHH
T ss_conf 8999999955651538999999996597899977599985889999976014-------660677631476777778799
Q ss_pred HHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE-EEEECCCCCC-CCCCCCCCCEE--
Q ss_conf 9999863136089861311222347776401100001346521001346565302-6752451001-00001211000--
Q gi|254780486|r 184 DLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG-ALVGSNKIIY-DYLINYAKPFI-- 259 (381)
Q Consensus 184 ~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G-G~i~~~~~ii-~~l~~~~~~~i-- 259 (381)
+|.++|+++|+++++|-+|++|-+ .-.+...+.++++-|--|-+|-.| |++..++.+. .-+ ..+....
T Consensus 161 ~I~~~~~~~g~~~~vDa~Q~~g~~-------pidv~~l~~D~l~~S~HK~~GP~GiG~L~ir~~~~l~P~-~~Gg~~~~~ 232 (382)
T TIGR03403 161 EIGEICKERGVLFHTDAVQAIGKI-------PVDVQKAGVDFLSFSAHKFHGPKGVGGLYIRKGVELTPL-FHGGEHMGG 232 (382)
T ss_pred HHHHHHHHCCCEEEEEHHHHCCCC-------CCCCCCCCCCEEEEEHHHCCCCCCEEEEEECCCCCCCCC-CCCCCCCCC
T ss_conf 999999872987996713413564-------643232346524531010368883499998677765876-589877476
Q ss_pred -CCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCCCCC------CCCCC-EEEEEECCHHHHHHHHHHH
Q ss_conf -01357750257898878988627-102247899999999876417978------99897-2899958979999999999
Q gi|254780486|r 260 -YTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKKIGF------SSQSH-IQSIVIGDNKSCLNIAKNL 330 (381)
Q Consensus 260 -fst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~~g~------~~~s~-I~~v~~gd~~~a~~~~~~L 330 (381)
-++.++.+.+++..+++++..+. +...++++++.+++.+......+. +...| ++.+.+. ...+..+...|
T Consensus 233 ~r~GT~n~~~i~~l~~A~~~~~~~~~~~~~~~~~L~~~l~~~L~~i~~~~i~g~~~~r~p~~~~~~~~-~i~~~~~~~~L 311 (382)
T TIGR03403 233 RRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLEDALLELPDVFVVGDREHRVPNTILISIK-GVEGEAMLWDL 311 (382)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCHHHCCCCEEEEECC-CCCHHHHHHHH
T ss_conf 12798678899999999999999899999999999999999998177946716833258857986279-98989999984
Q ss_pred HHCCEEEEEECC-------C--C-----CCC--CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 977918986228-------8--8-----888--870399962878999999999999999988738
Q gi|254780486|r 331 QKKGFDIRAIRP-------P--T-----VPI--NTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 331 ~~~Gi~v~~i~~-------P--t-----Vp~--~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
-++||.|+.... | + .+. ..+-+|++++..+|+||||+++++|+++++++-
T Consensus 312 ~~~gI~v~~GsaCas~~~~~s~vl~a~g~~~~~~~~~vR~S~~~ynT~eeId~~i~~l~~~v~~lr 377 (382)
T TIGR03403 312 NKAGIAASTGSACASEDLEANPVMVAIGADKELAHTAIRLSLSRFTTEEEIDYTIEVFKKAVQRLR 377 (382)
T ss_pred CCCCEEEECHHHHCCCCCCCCHHHHHCCCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 709979975577289988758999971998544595799975899999999999999999999998
No 192
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.87 E-value=1.4e-19 Score=142.28 Aligned_cols=328 Identities=17% Similarity=0.187 Sum_probs=204.4
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH----HHHHHCCCCCEEEEC-CCCHHHHHHHH
Q ss_conf 0344656677988999999999986378688722443688589999999----984012888516741-66024565566
Q gi|254780486|r 34 FTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEE----EAADFFGFEKMLYFG-SGYAANMAILS 108 (381)
Q Consensus 34 f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~----~lA~~~g~e~al~~~-sG~~An~~~i~ 108 (381)
-+|-|| .+|.+.++.---+..+|.-|..|-|...|+ +...++|. +..++||.+.|-+-| ||..||++++.
T Consensus 37 IASEN~----~S~~v~~a~gS~ltnkYaEGyPg~RyY~G~-~~iD~iE~la~~rak~LF~a~~anVqp~SGs~AN~av~~ 111 (422)
T PRK13034 37 IASENI----VSKAVLQAQGSVLTNKYAEGYPGKRYYGGC-EHVDEVEALAIERAKQLFGADYANVQPHSGSQANGAVYL 111 (422)
T ss_pred ECCCCC----CCHHHHHHHCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 605775----899999985662126466889986554775-369999999999999984999635477861999999999
Q ss_pred HHCCCCCCCCHHHHCCHH-HHHHHH--HCC--CCCEEECC------CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC
Q ss_conf 631689710045420267-752666--408--76403056------8814789976431000247860797146215766
Q gi|254780486|r 109 TLPQATDLIVYDKLVHAS-IREGIN--SGK--AQAIAIPH------NNINSFAENINKWRKSGGKGFPWIVVESIYSMDG 177 (381)
Q Consensus 109 ~l~~~~d~ii~D~~~HaS-i~~g~~--ls~--a~~~~f~H------nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G 177 (381)
+|.+|||.|+.=.+.|.- +-.|.+ .++ -+.+.|.- -|++.++++.++.+. +.+|+--+.|+-
T Consensus 112 all~PGD~im~l~l~~GGHltHG~~~~~sg~~~~~~~Y~vd~~~~~IDyd~l~~~a~~~kP-----klIi~G~Say~r-- 184 (422)
T PRK13034 112 ALLKPGDTILGMSLDAGGHLTHGAKVALSGKWFNAVQYGVDRDTGLIDYDQVERLAVEHKP-----KLIIAGFSAYPR-- 184 (422)
T ss_pred HHCCCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHHHCCC-----CEEEECCCCCCC--
T ss_conf 9648998688436777762557887553456047898217532382279999999873199-----869966612442--
Q ss_pred CHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCC-CCEEEEEECC-CCCCCCCCCCC
Q ss_conf 134689999986313608986131122234777640110000134652100134656-5302675245-10010000121
Q gi|254780486|r 178 DKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKAL-GSSGALVGSN-KIIYDYLINYA 255 (381)
Q Consensus 178 ~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~-g~~GG~i~~~-~~ii~~l~~~~ 255 (381)
..|.++++++|++.|++|++|=||-.|.+ ..| + ...+...-+++++|--|.| |-.||.|+++ +++.+.+...-
T Consensus 185 -~id~k~~reIAd~vGA~l~~D~AHiaGLI-A~g--~-~psP~~~ADvvT~TTHKTLrGPrGGiIl~~~~el~~kId~av 259 (422)
T PRK13034 185 -TLDFARFRAIADSVGAILMVDMAHIAGLV-AAG--R-HPNPVPHAHVVTTTTHKTLRGPRGGMILTNDEEIAKKINSAV 259 (422)
T ss_pred -CCCHHHHHHHHHHHCCEEEECHHHHHHHH-CCC--C-CCCCCCCCEEEECCCCCCCCCCCCCEEECCHHHHHHHHHCCC
T ss_conf -12889999999872977981156554541-033--3-699877752886775147789884357526699999864333
Q ss_pred CCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHH-HHHCCCCC---CCCCCEEEEEECCHH-HHHHHHHH
Q ss_conf 100001357750257898878988627-1022478999999998-76417978---998972899958979-99999999
Q gi|254780486|r 256 KPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDK-IANKKIGF---SSQSHIQSIVIGDNK-SCLNIAKN 329 (381)
Q Consensus 256 ~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~-~~~~~~g~---~~~s~I~~v~~gd~~-~a~~~~~~ 329 (381)
-|.+.+++..-..++-+.+-.+.+..+ .+-.++..+|++.+.+ +...++.+ -+++|.+-|-+.... .-....+.
T Consensus 260 FPg~qggp~~h~iAa~Ava~~Ea~~~~f~~Ya~qVv~NAkaLa~~L~~~G~~vv~ggTdnHlvlvDl~~~gi~G~~a~~~ 339 (422)
T PRK13034 260 FPGLQGGPLMHVIAAKAVAFGEALEPGFKTYIDQVIANAQALAEVLKARGYDLVTGGTDNHLLLVDLRPKGLTGKQAEQA 339 (422)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEECCCCCCCHHHHHHH
T ss_conf 88645671577899999999996687699999999999999999999789804579998763665356567756999999
Q ss_pred HHHCCEEEEEECCC---CCCCCCCEEEEEC----CCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99779189862288---8888870399962----8789999999999999999887
Q gi|254780486|r 330 LQKKGFDIRAIRPP---TVPINTARLRISI----TLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 330 L~~~Gi~v~~i~~P---tVp~~~~rlRi~v----~a~~t~edi~~~~~~l~~v~~E 378 (381)
|.+.||.++--.-| --|...+.|||-. +....++|+++..+.|.++++-
T Consensus 340 L~~~gI~~Nkn~iP~D~~~p~~~sGiRiGt~a~TtRG~~e~em~~ia~~I~~vl~~ 395 (422)
T PRK13034 340 LERAGITVNKNGIPFDPEKPFVTSGIRIGTPAGTTRGFGAAEFREIAGWILDVLDA 395 (422)
T ss_pred HHHCCEEECCCCCCCCCCCCCCCCCEEECCHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf 99839586678688999899889812667788983899889999999999999973
No 193
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.86 E-value=6.2e-19 Score=138.16 Aligned_cols=344 Identities=13% Similarity=0.117 Sum_probs=187.1
Q ss_pred HHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 99999999759839992897689803446566779889999999999863786887224436885899999999840128
Q gi|254780486|r 10 EERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG 89 (381)
Q Consensus 10 ~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g 89 (381)
-.++.+++++- ..-.|+++|||+--+= .+...+.+++|+.++++ .. ++.+.+ .|..++-+++-+.+.+-+|
T Consensus 13 ~~~~~~~~a~~---~~~~g~~iI~L~iG~P-d~~~P~~v~ea~~~al~-~~-~~Y~~~---~G~~~LReAia~~~~~~~~ 83 (394)
T TIGR03538 13 FEKLAALLAGV---TPPASLPPIALSIGEP-KHATPAFVLEALRENLH-GL-STYPTT---KGLPELRQAIARWLERRFD 83 (394)
T ss_pred HHHHHHHHHHH---HHHCCCCEEECCCCCC-CCCCCHHHHHHHHHHHC-CC-CCCCCC---CCCHHHHHHHHHHHHHHHC
T ss_conf 99999999600---3408998787848889-99977999999999843-88-899999---8869999999999999739
Q ss_pred C------CCEEEECCCC-HHHHHHHHHHCCCCCC--CCHHHHCCHHHHHHHHHCCCCCEEEC---CC----CHHHHHHHH
Q ss_conf 8------8516741660-2456556663168971--00454202677526664087640305---68----814789976
Q gi|254780486|r 90 F------EKMLYFGSGY-AANMAILSTLPQATDL--IVYDKLVHASIREGINSGKAQAIAIP---HN----NINSFAENI 153 (381)
Q Consensus 90 ~------e~al~~~sG~-~An~~~i~~l~~~~d~--ii~D~~~HaSi~~g~~ls~a~~~~f~---Hn----D~~~Le~~l 153 (381)
. ++-++..+|. .|-..++.+++++||. |++-.=.-.+-...+.+++++.+.++ -| |++++++.+
T Consensus 84 ~~~~~dp~~~I~vt~Ga~~al~~~~~~l~~pGd~~~V~~p~P~Y~~y~~~~~~~g~~~~~v~~~~e~~~~~d~~~l~~~~ 163 (394)
T TIGR03538 84 LPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYEGAALLAGAEPYFLNCTAENGFLPDFDAVPESV 163 (394)
T ss_pred CCCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHHHCCCEEEECCCCCCCCCCCCHHHHHHHC
T ss_conf 88778967769989888999999999972999810899478866452999997599899758673458888999998745
Q ss_pred HHHHHCCCCCCCEEEECCCCCCCCCH---HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC--EEEE---EHH--CCCC
Q ss_conf 43100024786079714621576613---468999998631360898613112223477764--0110---000--1346
Q gi|254780486|r 154 NKWRKSGGKGFPWIVVESIYSMDGDK---APLDDLVKIANDYDGFIVVDEAHATGVCGPLGK--GLTH---IIE--ERNN 223 (381)
Q Consensus 154 ~~~~~~~~~~~~~vv~egv~Sm~G~~---apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~--G~~~---~~~--~~~~ 223 (381)
.. +.+.+++.-.=.. .|.+ ..+++|+++|++||++++.||+|+.-++..... +..+ ..+ ..++
T Consensus 164 ~~------~tk~iil~sP~NP-TG~v~s~~~l~~l~~~a~~~~i~iisDE~Y~~l~~d~~~~p~~~~~~~~~~~~~~~~~ 236 (394)
T TIGR03538 164 WR------RCQLLFVCSPGNP-TGAVLSLETLKKLIELADQYGFIIASDECYSELYFDEANPPAGLLQAAAALGRDDFRR 236 (394)
T ss_pred CC------CCEEEEECCCCCC-CCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCEEECCCCCCHHHHHHHHHHCCCCCCC
T ss_conf 23------6659998899999-8977787999999999732676999806833278578889737877776625444476
Q ss_pred CCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHH
Q ss_conf 521001346565302---67524510010000121100001357750257898878988627102---247899999999
Q gi|254780486|r 224 VIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL---HKSLLQLINITD 297 (381)
Q Consensus 224 ~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~---~~~l~~~~~~~~ 297 (381)
+|++.||||.|+..| ||+++++++++.+... ..+..+ +.|.+...++.+++. .+..+ ++..+++.....
T Consensus 237 ~i~~~S~SK~~~~~G~RiG~~~~~~~~i~~~~~~-~~~~~~-~~~~~~q~a~~aa~~---~~~~~~~~r~~~~~r~~~~~ 311 (394)
T TIGR03538 237 CLVFHSLSKRSNLPGLRSGFVAGDAEILKAFLRY-RTYHGC-AMPPPTQLASIAAWN---DEQHVRENRALYREKFAAVL 311 (394)
T ss_pred EEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHH-CCCCCC-CCCHHHHHHHHHHHC---CHHHHHHHHHHHHHHHHHHH
T ss_conf 7999556544454675179995799999999985-223742-689999999999848---98999999999999999999
Q ss_pred HHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHH-HCCEEEEEECC---CC--CCCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf 8764179789989728999589799999999999-77918986228---88--888870399962878999999999999
Q gi|254780486|r 298 KIANKKIGFSSQSHIQSIVIGDNKSCLNIAKNLQ-KKGFDIRAIRP---PT--VPINTARLRISITLNVDEPTIVKLFDI 371 (381)
Q Consensus 298 ~~~~~~~g~~~~s~I~~v~~gd~~~a~~~~~~L~-~~Gi~v~~i~~---Pt--Vp~~~~rlRi~v~a~~t~edi~~~~~~ 371 (381)
+.....+.+..+..-..+++.-+....+++++|+ +.||.+.|..+ +. .+.|...+||+... ++|+|++.++.
T Consensus 312 ~~L~~~~~~~~P~Gg~y~w~~~~~~~~~f~~~ll~e~gV~v~PG~~F~~~~~~~~~G~g~iR~s~~~--~~e~l~ea~~R 389 (394)
T TIGR03538 312 EILGPVLDLELPDAGFYLWPKVPGDDEAFARALYEEENVTVLPGRYLSREAEGVNPGAGRVRIALVA--PLEECVEAAER 389 (394)
T ss_pred HHHHCCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHCCEEEECCHHHCCCCCCCCCCCCEEEEEECC--CHHHHHHHHHH
T ss_conf 9864279625798548999968999999999999868999987734165545788899989999759--89999999999
Q ss_pred HHHHH
Q ss_conf 99998
Q gi|254780486|r 372 LPQII 376 (381)
Q Consensus 372 l~~v~ 376 (381)
|++++
T Consensus 390 l~~fl 394 (394)
T TIGR03538 390 IRRFI 394 (394)
T ss_pred HHHHC
T ss_conf 99869
No 194
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.86 E-value=1.9e-18 Score=135.11 Aligned_cols=335 Identities=16% Similarity=0.168 Sum_probs=197.4
Q ss_pred CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC----CCC-EEEECCCCHHH
Q ss_conf 7689803446566779889999999999863786887224436885899999999840128----885-16741660245
Q gi|254780486|r 29 QDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG----FEK-MLYFGSGYAAN 103 (381)
Q Consensus 29 ~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g----~e~-al~~~sG~~An 103 (381)
++++||+..+= .+...+.+++++.+++. ..+.+.. ...|...+.+.+-+.+.+.+| .++ .++++.+..|.
T Consensus 28 ~~vi~l~iG~P-d~~~p~~i~~a~~~a~~-~~~~~Y~---~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al 102 (393)
T COG0436 28 EDVIDLSIGEP-DFPTPEHIIEAAIEALE-EGGTHYT---PSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEAL 102 (393)
T ss_pred CCEEECCCCCC-CCCCCHHHHHHHHHHHH-CCCCCCC---CCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHH
T ss_conf 86797568899-99986999999999986-5677778---8767799999999998875399889766289826679999
Q ss_pred HHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC----C----CHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
Q ss_conf 6556663168971004542026775266640876403056----8----8147899764310002478607971462157
Q gi|254780486|r 104 MAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH----N----NINSFAENINKWRKSGGKGFPWIVVESIYSM 175 (381)
Q Consensus 104 ~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H----n----D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm 175 (381)
..++.++..+||.|++-.=.=.+....+++.+++.+.++= | |.++|++.+.. +.+.+++.-.=..
T Consensus 103 ~~a~~al~~pGDeVlip~P~Y~~y~~~~~~~gg~~v~v~l~~~~~~f~~d~~~l~~~i~~------ktk~i~ln~PnNP- 175 (393)
T COG0436 103 FLAFLALLNPGDEVLIPDPGYPSYEAAVKLAGGKPVPVPLDEEENGFKPDLEDLEAAITP------KTKAIILNSPNNP- 175 (393)
T ss_pred HHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCHHHHHHHCCC------CCEEEEEECCCCC-
T ss_conf 999999718998899838998255999987799798721666655874799999864774------6459999799996-
Q ss_pred CCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCC-CCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECC-CCC
Q ss_conf 66134---68999998631360898613112223477-76401100001346521001346565302---675245-100
Q gi|254780486|r 176 DGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGP-LGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSN-KII 247 (381)
Q Consensus 176 ~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~-~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~-~~i 247 (381)
+|.+. .|++|+++|++||++++.||++.--++.. .-....+..+..++.|.+.||||.++..| ||++++ +++
T Consensus 176 TGav~~~~~l~~i~~~a~~~~i~ii~DE~Y~~l~yd~~~~~s~~~~~~~~~~~I~i~s~SK~~~mtG~RiG~~v~~~~~l 255 (393)
T COG0436 176 TGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEHPSILELAGARDRTITINSFSKTYGMTGWRIGWVVGPPEEL 255 (393)
T ss_pred CCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCCCCCEEEEEECHHHH
T ss_conf 67788999999999999987929999636443626898777754427876418999456335788361218997276999
Q ss_pred CCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHCCCCCC----C-CCCEEEEEECC
Q ss_conf 1000012110000135775025789887898862710---22478999999998764179789----9-89728999589
Q gi|254780486|r 248 YDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPA---LHKSLLQLINITDKIANKKIGFS----S-QSHIQSIVIGD 319 (381)
Q Consensus 248 i~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~---~~~~l~~~~~~~~~~~~~~~g~~----~-~s~I~~v~~gd 319 (381)
++.+. +-..++.++ .+.+.-.++.++|+.-+.... .++..+++.....+......|+. . .+.-+.+-+..
T Consensus 256 ~~~~~-~l~~~~~~~-~~~~~Q~aa~~aL~~~~~~~~~~~~~~~~~~rr~~l~~~l~~~~g~~~~~~p~Ga~y~~~~i~~ 333 (393)
T COG0436 256 IAALR-KLKSYLTSC-APTPAQYAAIAALNGPQSDEVVEEMREEYRERRDLLVEALNEIGGLSVVKPPEGAFYLFPKIPE 333 (393)
T ss_pred HHHHH-HHHHHCCCC-CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCEEEEEECCC
T ss_conf 99999-999872368-7789999999995676630589999999999999999999755886651388864599765799
Q ss_pred HHHHHHHHHHHHHC-CEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 79999999999977-9189862288888887039996287899999999999999998873
Q gi|254780486|r 320 NKSCLNIAKNLQKK-GFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 320 ~~~a~~~~~~L~~~-Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
.....+++.+|+++ ||.|.|..+=--+.|...+|++... ++++++..++.+.+.+++.
T Consensus 334 ~~d~~~f~~~Ll~~~gV~v~PG~~Fg~~~g~~~vRis~~~--~~~~l~~a~~rl~~~~~~~ 392 (393)
T COG0436 334 LLDSEEFAKKLLEEAGVAVVPGSGFGEPPGEGYVRLSLAT--SEETLEEALRRLARFLAEY 392 (393)
T ss_pred CCCHHHHHHHHHHHCCEEEECHHHHCCCCCCCEEEEEEEC--CHHHHHHHHHHHHHHHHHC
T ss_conf 8998999999998679999572574978779879999736--8999999999999998610
No 195
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.86 E-value=1.5e-19 Score=142.03 Aligned_cols=301 Identities=15% Similarity=0.178 Sum_probs=179.4
Q ss_pred CCCEEEECCCCCC-CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CEEEECCCCHHHH
Q ss_conf 8976898034465-6677988999999999986378688722443688589999999984012888-5167416602456
Q gi|254780486|r 27 RRQDIWDFTSHDY-LALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE-KMLYFGSGYAANM 104 (381)
Q Consensus 27 ~~~~~l~f~s~dY-LGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e-~al~~~sG~~An~ 104 (381)
.+...+-++||-- +| ..|.+ -...+ .+|+- +.+.+|=++||+++|.+ +-+++..|-.-.+
T Consensus 22 ~~~~~ikL~sNEnP~~--~~~~~---~~~~l-nRYPD------------~~~~~L~~~lA~~~~v~~~~Ii~gnGSde~I 83 (346)
T PRK04635 22 GGSGDVWLNANESPFD--NEYKT---NFARL-NRYSE------------CQPKELIQAYAAYAGVKPEQVLTSRGADEGI 83 (346)
T ss_pred CCCCCEEEECCCCCCC--CCHHH---HHHHH-CCCCC------------CCHHHHHHHHHHHHCCCHHHEEECCCHHHHH
T ss_conf 9989489379999999--85656---59983-67999------------8889999999999686966899848899999
Q ss_pred -HHHHHHCCCC-CCCCH-HHHCCHHHH-HHHHHCCCCCEEECCC-----CHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
Q ss_conf -5566631689-71004-542026775-2666408764030568-----8147899764310002478607971462157
Q gi|254780486|r 105 -AILSTLPQAT-DLIVY-DKLVHASIR-EGINSGKAQAIAIPHN-----NINSFAENINKWRKSGGKGFPWIVVESIYSM 175 (381)
Q Consensus 105 -~~i~~l~~~~-d~ii~-D~~~HaSi~-~g~~ls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm 175 (381)
.++.++++++ |.|+. +. -.|++ .-+++.+++++.++-+ |+++++..+. +.+ +|++-.=.-=
T Consensus 84 ~~i~~af~~pg~d~vl~~~P--tF~~Y~~~a~~~g~~~~~vpl~~d~~~dl~~l~~~~~-------~~k-li~l~NPNNP 153 (346)
T PRK04635 84 ELLIRAFCEPNQDAILYCPP--TYGMYAISAETIGVERKTVPLTSDWQLDLPSIEANLD-------NVK-LVFVCSPNNP 153 (346)
T ss_pred HHHHHHHHCCCCCEEEECCC--CHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHCC-------CCC-EEEECCCCCC
T ss_conf 99999984699976997787--5699999997479679997368565779999986434-------875-8997789998
Q ss_pred CCCHHHHHHHHHHHHHC--CEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCC
Q ss_conf 66134689999986313--6089861311222347776401100001346521001346565302---675245100100
Q gi|254780486|r 176 DGDKAPLDDLVKIANDY--DGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDY 250 (381)
Q Consensus 176 ~G~~apL~~i~~l~~~y--~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~ 250 (381)
+|.+.+..++.++++.. +.+++||||+.- +.+.. .........+++|++.||||+||..| ||+.+++++++.
T Consensus 154 TG~~~~~~~l~~l~~~~~~~~lvVvDEAY~e--f~~~~-s~~~l~~~~~NliVlRTfSK~~gLaGlRlGY~ia~~~~i~~ 230 (346)
T PRK04635 154 TGNLVKRKDIISLLEMTKDRAIVVMDEAYID--FCPEA-STVDLLAQYPNLAILRTLSKAFALAGLRCGFTLANEELINV 230 (346)
T ss_pred CCCCCCHHHHHHHHHHCCCCCEEEEECCEEC--CCCCC-CHHHHHHHCCCEEEEECHHHHHCCCCCCCEEECCCHHHHHH
T ss_conf 7644899999999984875655998745310--36564-46789860881687505678740654111410079999999
Q ss_pred CCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHH---HHHHHHHHHHHHCCC-CC---CCCCCEEEEEECCHHHH
Q ss_conf 001211000013577502578988789886271022478---999999998764179-78---99897289995897999
Q gi|254780486|r 251 LINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSL---LQLINITDKIANKKI-GF---SSQSHIQSIVIGDNKSC 323 (381)
Q Consensus 251 l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l---~~~~~~~~~~~~~~~-g~---~~~s~I~~v~~gd~~~a 323 (381)
+.....|| ..+....+++.++++.-.. .+...+. .+...+... ....+ |+ ++.+..+.+.+++ +
T Consensus 231 l~k~~~p~----~v~~~a~~~a~~al~~~~~-~~~~~~~~~~~~~r~~l~~-~l~~~~g~~~~~s~aNFil~~~~~---~ 301 (346)
T PRK04635 231 LLKVIAPY----PVPVPVAEIATQALSEAGL-ARAKFQVLDLSANRAYLQA-GLSMLPGVTVFEGWGNYLLVKFPD---G 301 (346)
T ss_pred HHHHHCCC----CCCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH-HHHHCCCCEECCCCCCEEEEECCC---H
T ss_conf 99840898----8889999999999730789-9999999999999999999-998679907789988089998899---9
Q ss_pred HHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999999779189862288888887039996287899999999999999998
Q gi|254780486|r 324 LNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 324 ~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
.++.+.|+++||+|+.. | ....|||++. |+||+++++++|++..
T Consensus 302 ~~~~~~l~~~GI~VR~~--~----~~~~iRISvG---t~eEn~~~l~~lr~~~ 345 (346)
T PRK04635 302 DALFKAAWDHGIILRNS--P----IENCVRISVG---NREECEKTLGFIRNYY 345 (346)
T ss_pred HHHHHHHHHCCEEECCC--C----CCCEEEEECC---CHHHHHHHHHHHHHHH
T ss_conf 99999998399598569--9----9997999539---9999999999999985
No 196
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.86 E-value=2e-18 Score=135.01 Aligned_cols=318 Identities=15% Similarity=0.147 Sum_probs=180.4
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC----CCEEEECCCCHH
Q ss_conf 8976898034465667798899999999998637868872244368858999999998401288----851674166024
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF----EKMLYFGSGYAA 102 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~----e~al~~~sG~~A 102 (381)
.+.+++||+--+= .+...|.|+++..++.+ +.+. +- ..|..++.+++-+.+.+.+|. ++-++..+|...
T Consensus 25 ~~~~vI~l~iG~P-d~p~P~~v~~a~~~a~~-~~~Y--~~---~~G~~~LReAIa~~~~~~~g~~~~~~~~V~vt~Ga~~ 97 (364)
T PRK07865 25 HPDGIVDLSVGTP-VDPVPPVIQEALAAAAD-APGY--PT---TAGTPELREAIVAWLARRYGVTGLDPAAVLPVIGSKE 97 (364)
T ss_pred CCCCEEECCCCCC-CCCCCHHHHHHHHHHCC-CCCC--CC---CCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHH
T ss_conf 8998398569899-89989999999996248-9998--99---8887999999999999983989899687997698899
Q ss_pred HHHHH-HHH-CCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHH
Q ss_conf 56556-663-1689710045420267752666408764030568814789976431000247860797146215766134
Q gi|254780486|r 103 NMAIL-STL-PQATDLIVYDKLVHASIREGINSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKA 180 (381)
Q Consensus 103 n~~~i-~~l-~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~a 180 (381)
.+..+ ..+ .+++|.|+.-.-...+-..++++.+++.+.. +++++.. ++.+.+|++-+=.-=.|.+.
T Consensus 98 ~l~~l~~~l~~~pGD~Vlip~P~Yp~y~~~~~~~g~~~v~~-----d~~~~~~-------~~~~~li~lnsP~NPTG~v~ 165 (364)
T PRK07865 98 LVAWLPTLLGLGPGDVVVVPELAYPTYEVGARLAGATVVRA-----DSLTELG-------PQTPALIWLNSPSNPTGRVL 165 (364)
T ss_pred HHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHCCCEEEEC-----CCHHHCC-------CCCCEEEEECCCCCCCCCCC
T ss_conf 99999999707999989986678601999999819865610-----7887759-------87752999899969855117
Q ss_pred H---HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEE---EHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCC
Q ss_conf 6---89999986313608986131122234777640110---0001346521001346565302---6752451001000
Q gi|254780486|r 181 P---LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTH---IIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYL 251 (381)
Q Consensus 181 p---L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~---~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l 251 (381)
+ +++|+++|++||++++.||+|+--++...-..... ..+..+++|++.||||.|+..| ||+++++++++.+
T Consensus 166 s~e~l~~l~~la~~~~i~vi~DE~Y~~l~~~~~~~s~l~p~~~~~~~~~vi~i~S~SK~~~~~GlRiG~i~~~~~li~~l 245 (364)
T PRK07865 166 GVDHLRKVVAWARERGAVVASDECYLGLGWDAEPVSVLDPRVCGGDHTGLLAVHSLSKQSNLAGYRAGFVAGDPALVAEL 245 (364)
T ss_pred CHHHHHHHHHHHHHCEEEEEECCCHHHHCCCCCCCCCCCHHHCCCCCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHH
T ss_conf 69999999999776718998254257642589886513864427775757999436523067774489996799999999
Q ss_pred CCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHCCCCCC---CCCCEEEEEECCHHHHHH
Q ss_conf 012110000135775025789887898862710---22478999999998764179789---989728999589799999
Q gi|254780486|r 252 INYAKPFIYTTSPSPILAVVACEALKLIKRKPA---LHKSLLQLINITDKIANKKIGFS---SQSHIQSIVIGDNKSCLN 325 (381)
Q Consensus 252 ~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~---~~~~l~~~~~~~~~~~~~~~g~~---~~s~I~~v~~gd~~~a~~ 325 (381)
... +.+.......| ...++.++++ ++.. .++..+++...+.. .....|+. ++.. ..+++..+..+.+
T Consensus 246 ~~~-~~~~~~~~~~~-~Q~a~~aal~---~~~~~~~~~~~y~~rr~~l~~-~L~~~g~~~~~p~G~-fylw~~~~~~~~~ 318 (364)
T PRK07865 246 LAV-RKHAGMMVPAP-VQAAMVAALG---DDAHVREQRERYARRRAVLLP-ALEAAGFTVDHSEAG-LYLWATRGEDCWD 318 (364)
T ss_pred HHH-HHHCCCCCCHH-HHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHH-HHHHCCCEECCCCCE-EEEEEECCCCHHH
T ss_conf 999-98550237899-9999999957---939999999999999999999-998679766269922-7998888999999
Q ss_pred HHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 999999779189862288888887039996287899999999999999
Q gi|254780486|r 326 IAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILP 373 (381)
Q Consensus 326 ~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~ 373 (381)
..+.|.++||.+.|-.+= -+.|...+||+.. .++|+|++.++.|.
T Consensus 319 ~~~~l~e~gV~v~PG~~F-g~~g~~~vRls~~--~~~e~l~ea~~RLa 363 (364)
T PRK07865 319 TVAWLAERGILVAPGDFY-GPAGAQHVRVALT--ATDERIAAAVERLT 363 (364)
T ss_pred HHHHHHHCCEEEECCCCC-CCCCCCEEEEEEC--CCHHHHHHHHHHHC
T ss_conf 999999799899188743-6899986999965--98999999999868
No 197
>PRK03262 consensus
Probab=99.86 E-value=2.1e-19 Score=141.11 Aligned_cols=302 Identities=20% Similarity=0.282 Sum_probs=184.1
Q ss_pred CCCEEEECCCCCC-CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-CEEEECCCCHHHH
Q ss_conf 8976898034465-6677988999999999986378688722443688589999999984012888-5167416602456
Q gi|254780486|r 27 RRQDIWDFTSHDY-LALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE-KMLYFGSGYAANM 104 (381)
Q Consensus 27 ~~~~~l~f~s~dY-LGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e-~al~~~sG~~An~ 104 (381)
.++..+-++||-. +|.+ +.+. .+.+ ++|+- +.+.+|-++||+++|.+ +.+++..|-.--+
T Consensus 26 ~~~~~ikL~sNEnP~~~~--~~~~---~~~l-nrYPD------------~~~~~Lr~aiA~~~gv~~~~I~vGnGSdE~I 87 (355)
T PRK03262 26 GGNGDVWLNANEYPTAVE--FQLT---QQTL-NRYPE------------CQPKAVIENYAQYAGVKPEQVLVSRGADEGI 87 (355)
T ss_pred CCCCCEEEECCCCCCCCC--HHHH---HHHH-CCCCC------------CCHHHHHHHHHHHHCCCHHHEEEECCHHHHH
T ss_conf 999988957899999984--8776---7887-03989------------9889999999998685855799937899999
Q ss_pred -HHHHHHCCCC-CCCCHHHHCCHHHH-HHHHHCCCCCEEECCC-----CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
Q ss_conf -5566631689-71004542026775-2666408764030568-----81478997643100024786079714621576
Q gi|254780486|r 105 -AILSTLPQAT-DLIVYDKLVHASIR-EGINSGKAQAIAIPHN-----NINSFAENINKWRKSGGKGFPWIVVESIYSMD 176 (381)
Q Consensus 105 -~~i~~l~~~~-d~ii~D~~~HaSi~-~g~~ls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~ 176 (381)
.++.++++++ |.|+.=.- -.|++ ..+++.+++++.++-+ |++.+...+ . +.+ +|++-.=.-=+
T Consensus 88 ~~i~~~f~~pg~d~vl~~~P-tF~~Y~~~a~~~g~~~~~vp~~~~~~~dl~~~~~~~---~----~~k-lv~l~nPNNPT 158 (355)
T PRK03262 88 ELLIRAFCEPGKDAILYCPP-TYGMYAVSAETIGVEIRTVPTLENWQLDLQAIADNL---D----GVK-VVYVCSPNNPT 158 (355)
T ss_pred HHHHHHHHCCCCCEEEECCC-CHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHC---C----CCC-EEEECCCCCCC
T ss_conf 99999986389977997788-859999999973983899646556676899999640---4----888-89976899987
Q ss_pred CCHHHHHHHHHHHHHC--CEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCC
Q ss_conf 6134689999986313--6089861311222347776401100001346521001346565302---6752451001000
Q gi|254780486|r 177 GDKAPLDDLVKIANDY--DGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYL 251 (381)
Q Consensus 177 G~~apL~~i~~l~~~y--~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l 251 (381)
|.+-+.++|.++++.. +++++||||+.- +. +.. .........+++|++.||||+||..| ||+.+++++++.+
T Consensus 159 G~~~~~~el~~l~~~~~~~~lvVvDEAY~e-F~-~~~-s~~~l~~~~~NliVlRTfSK~~gLAGlRlGy~ia~~~ii~~l 235 (355)
T PRK03262 159 GNLINPQDLRTLLELTRGKAIVVADEAYIE-FC-PQA-SLAGWLAEYPNLVILRTLSKAFALAGLRCGFTLANEEVINLL 235 (355)
T ss_pred CCCCCHHHHHHHHHHCCCCCEEEEECHHHH-HC-CCC-CHHHHHHCCCCEEEEECHHHHHCCCCCCEEEEECCHHHHHHH
T ss_conf 644699999999976876728987302554-36-562-155676407744676126777246653505431799999999
Q ss_pred CCCCCCEECCCCCCCCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHH--HHCCCC-----CCCCCCEEEEEECCHHH
Q ss_conf 0121100001357750257898878988627--10224789999999987--641797-----89989728999589799
Q gi|254780486|r 252 INYAKPFIYTTSPSPILAVVACEALKLIKRK--PALHKSLLQLINITDKI--ANKKIG-----FSSQSHIQSIVIGDNKS 322 (381)
Q Consensus 252 ~~~~~~~ifst~l~P~~~aaa~aal~~l~~~--~~~~~~l~~~~~~~~~~--~~~~~g-----~~~~s~I~~v~~gd~~~ 322 (381)
+..-.|| ..+.+...++.+++. .+ +..+++..+..+.++++ ....++ +++.++.+.+.+.+.
T Consensus 236 ~k~~~p~----~vn~~~~~~a~~al~---~~~~~~~~~~i~~i~~~R~~l~~~L~~l~~~~~v~pS~aNFvl~~~~~~-- 306 (355)
T PRK03262 236 LKVIAPY----PLSTPVADIAAQALS---PQGIEAMRERVAQINANRAWLIAALKEIACVEQVFDSETNYILARFTAS-- 306 (355)
T ss_pred HHHCCCC----CCCHHHHHHHHHHHC---CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCEEEEECCCH--
T ss_conf 9843899----877999999999972---2659999999999999999999999848998606899782899978999--
Q ss_pred HHHHHHHHHHCCEEEEEE-CCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 999999999779189862-2888888870399962878999999999999999
Q gi|254780486|r 323 CLNIAKNLQKKGFDIRAI-RPPTVPINTARLRISITLNVDEPTIVKLFDILPQ 374 (381)
Q Consensus 323 a~~~~~~L~~~Gi~v~~i-~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~ 374 (381)
.++.++|+++||+|+.. .+|.. ...|||++. |+||.++++++|+.
T Consensus 307 -~~~~~~L~~~gIlVR~~~~~~gl---~~~lRisig---t~een~~~l~aLka 352 (355)
T PRK03262 307 -SAVFKSLWDQGIILRDQNKQPSL---SNCLRITIG---TREECQRVIDALRA 352 (355)
T ss_pred -HHHHHHHHHCCCEEEECCCCCCC---CCEEEEECC---CHHHHHHHHHHHCC
T ss_conf -99999999699389668887899---998999669---99999999999713
No 198
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.86 E-value=1.7e-18 Score=135.39 Aligned_cols=320 Identities=16% Similarity=0.147 Sum_probs=183.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCC-CCCHHHHHHHHHHHHHCCCC--CEEEECCCCHHHHHHHHHH---CCCCCCC
Q ss_conf 9889999999999863786887224436-88589999999984012888--5167416602456556663---1689710
Q gi|254780486|r 44 SSTLLREKILSSLDSKIPIGSGGSRLLC-GNYNQHLELEEEAADFFGFE--KMLYFGSGYAANMAILSTL---PQATDLI 117 (381)
Q Consensus 44 ~~p~v~~a~~~a~~~~~g~~~~~sr~~~-G~~~~~~~lE~~lA~~~g~e--~al~~~sG~~An~~~i~~l---~~~~d~i 117 (381)
-.|+|++++.+.+...|+ ++++.--.+ =....+++.=+++|+|+|.+ ...+.++++.++-.++..+ -+++|.|
T Consensus 11 ~~~~V~~a~~~~~~~~~~-np~~~h~~~~~a~~~~e~aR~~iA~~lga~~~eIvFt~~~T~a~n~~i~~~~~~~~~~d~I 89 (379)
T TIGR03402 11 VDPEVLEAMLPYFTEYFG-NPSSMHSFGGEVGKAVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHI 89 (379)
T ss_pred CCHHHHHHHHHHHHHCCC-CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCCEE
T ss_conf 999999999999996589-9776589999999999999999999829996739992887999999999999867999999
Q ss_pred CHHHHCCHHHHHHHH---HCCCCCEEECC-----CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHH
Q ss_conf 045420267752666---40876403056-----8814789976431000247860797146215766134689999986
Q gi|254780486|r 118 VYDKLVHASIREGIN---SGKAQAIAIPH-----NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIA 189 (381)
Q Consensus 118 i~D~~~HaSi~~g~~---ls~a~~~~f~H-----nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~ 189 (381)
+.-..-|.|+..... -.+.++...+- -|+++|++.+.. .+.+|.+-.+-+..|.+.|+++|.++|
T Consensus 90 i~s~~eH~a~~~~~~~l~~~g~~v~~~~~~~~g~id~~~l~~~l~~-------~T~lvs~~~~sn~tG~i~pv~~I~~~~ 162 (379)
T TIGR03402 90 ITTAVEHPAVLSLCQHLEKQGYKVTYLPVDEEGRLDLEELRAAITD-------DTALVSVMWANNETGTIFPIEEIGEIA 162 (379)
T ss_pred EEECCHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHCC-------CCEEEEEECCCCCCCHHHHHHHHHHHH
T ss_conf 9801310456679999996598899970378982642667887267-------862899612578887017899999999
Q ss_pred HHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE-EEEECCCCCC-CCCCCCCCCE---ECCCCC
Q ss_conf 3136089861311222347776401100001346521001346565302-6752451001-0000121100---001357
Q gi|254780486|r 190 NDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG-ALVGSNKIIY-DYLINYAKPF---IYTTSP 264 (381)
Q Consensus 190 ~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G-G~i~~~~~ii-~~l~~~~~~~---ifst~l 264 (381)
+++|+++++|-+|++|.. + --....+-++++.+.-|-+|-.| |++..++... +-+. .+.+. .-++.+
T Consensus 163 ~~~g~~~~vDa~Q~~g~~-p------idv~~~~~D~~~~S~hK~~GP~G~G~Ly~r~~~~~~P~~-~Gg~~e~~~~~GT~ 234 (379)
T TIGR03402 163 KERGALFHTDAVQAVGKI-P------IDLKEMNIDMLSLSGHKLHGPKGVGALYIRKGTRFRPLL-RGGHQERGRRAGTE 234 (379)
T ss_pred HHCCCEEEEECCCCCCCC-C------CCHHHHCCCCEECCHHHCCCCCCEEEEEECCCCCCCCCC-CCCCCCCCCCCCCH
T ss_conf 763988994531124664-6------403441577212021113688725999982676668767-88887777678971
Q ss_pred CCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCCC------CCC-CCCC-EEEEEECCHHHHHHHHHHHHHCCE
Q ss_conf 750257898878988627-1022478999999998764179------789-9897-289995897999999999997791
Q gi|254780486|r 265 SPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKKI------GFS-SQSH-IQSIVIGDNKSCLNIAKNLQKKGF 335 (381)
Q Consensus 265 ~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~~------g~~-~~s~-I~~v~~gd~~~a~~~~~~L~~~Gi 335 (381)
+.+.+++..+++++.... +....++..+.+.+.+.....+ |-. ...| +..+-+. ......+...|-++||
T Consensus 235 n~~~i~gl~~a~~~~~~~~~~~~~~~~~l~~~l~~~ll~~~~~~~i~g~~~~r~p~~~~~~~~-~~~~~~i~~~L~~~gI 313 (379)
T TIGR03402 235 NVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAGLLARIPDARLNGDPTKRLPNTVNISFE-YIEGEAILLLLDMEGI 313 (379)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHCCCCCEEECCC-CCCHHHHHHHHCCCCE
T ss_conf 299999999999999975999999999999999999985089827547866648873032369-9899999998451892
Q ss_pred EEEEEC-------CCC-------CC--CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 898622-------888-------88--8870399962878999999999999999988738
Q gi|254780486|r 336 DIRAIR-------PPT-------VP--INTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 336 ~v~~i~-------~Pt-------Vp--~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
.++... .|. .| ...+.||++++..+|+||||+++++|+++++++-
T Consensus 314 ~v~~G~~Ca~~~~~ps~vL~a~g~~~~~~~g~iRvS~~~ynT~edId~li~aL~~iv~~lr 374 (379)
T TIGR03402 314 CASSGSACTSGSLEPSHVLRAMGVPHTAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIARLR 374 (379)
T ss_pred EEECCHHCCCCCCCHHHHHHHCCCCHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 9975032159998624999975998333395699973899999999999999999999998
No 199
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=99.86 E-value=3.8e-18 Score=133.29 Aligned_cols=321 Identities=19% Similarity=0.246 Sum_probs=201.3
Q ss_pred CCCCCH-HHHHHHHHHHHHHCCCCC--CCCCCCCCCCHHHHHHHHHHHHHCCCC--CEEEECCCCHHHHH-HHHHH---C
Q ss_conf 677988-999999999986378688--722443688589999999984012888--51674166024565-56663---1
Q gi|254780486|r 41 ALSSST-LLREKILSSLDSKIPIGS--GGSRLLCGNYNQHLELEEEAADFFGFE--KMLYFGSGYAANMA-ILSTL---P 111 (381)
Q Consensus 41 Gl~~~p-~v~~a~~~a~~~~~g~~~--~~sr~~~G~~~~~~~lE~~lA~~~g~e--~al~~~sG~~An~~-~i~~l---~ 111 (381)
+.++-| .+.++..+.. ++|.-+. +....-.-.++.+++..+.+|+|+|.+ +.++|.+|....+- +..++ .
T Consensus 30 a~~~~p~~V~~a~~~~~-~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~ 108 (405)
T COG0520 30 ATSQKPQAVLDAVAEYY-RRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSL 108 (405)
T ss_pred CCCCCCHHHHHHHHHHH-HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHH
T ss_conf 56667889999999999-97402457554412799999999999999998199987729995983799999999702410
Q ss_pred CCCCCCCHHHHCCHHHH---H-HHHHCCCCCEEECCC-----CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHH
Q ss_conf 68971004542026775---2-666408764030568-----81478997643100024786079714621576613468
Q gi|254780486|r 112 QATDLIVYDKLVHASIR---E-GINSGKAQAIAIPHN-----NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPL 182 (381)
Q Consensus 112 ~~~d~ii~D~~~HaSi~---~-g~~ls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL 182 (381)
+++|.|++-..-|.|.+ . .++-.|++++.++-+ |+++++.++ .+.+.+|++..|....|.+.|+
T Consensus 109 ~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~~g~~~~d~~~~~i-------~~~Tklvais~vSn~tG~~~pv 181 (405)
T COG0520 109 KPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDDDGLLDLDALEKLI-------TPKTKLVALSHVSNVTGTVNPV 181 (405)
T ss_pred CCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHC-------CCCCEEEEEECCCCCCCCCCCH
T ss_conf 689989980465520089999999875968999841899972889998646-------9994499996641675540409
Q ss_pred HHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCC-CCCCEE-EEEECCCCCCCCCC--CCC---
Q ss_conf 99999863136089861311222347776401100001346521001346-565302-67524510010000--121---
Q gi|254780486|r 183 DDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSK-ALGSSG-ALVGSNKIIYDYLI--NYA--- 255 (381)
Q Consensus 183 ~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsK-a~g~~G-G~i~~~~~ii~~l~--~~~--- 255 (381)
++|.++|++||++++||-||+.|.+ + .. ....+-++++-+--| -+|-.| |++.+++++.+.+. ..+
T Consensus 182 ~~I~~la~~~ga~v~VDaaq~~~h~-~-----id-v~~l~~Df~afsgHKwl~gP~GiGvLy~r~~~l~~l~P~~~gg~~ 254 (405)
T COG0520 182 KEIAELAHEHGALVLVDAAQAAGHL-P-----ID-VQELGCDFLAFSGHKWLLGPTGIGVLYVRKELLEELEPFLGGGGM 254 (405)
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCC-C-----CC-HHHCCCCEEEECCCCCCCCCCCEEEEEECHHHHHHCCCCCCCCCC
T ss_conf 9999999984998999771334756-6-----88-556189899976743257998529999866558437897778872
Q ss_pred --------------CCEECCC-CCCCCHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHCCC-----CCC--CCCC
Q ss_conf --------------1000013-577502578988789886271--022478999999998764179-----789--9897
Q gi|254780486|r 256 --------------KPFIYTT-SPSPILAVVACEALKLIKRKP--ALHKSLLQLINITDKIANKKI-----GFS--SQSH 311 (381)
Q Consensus 256 --------------~~~ifst-~l~P~~~aaa~aal~~l~~~~--~~~~~l~~~~~~~~~~~~~~~-----g~~--~~s~ 311 (381)
.+.-|-. .++.+...+..++++.+.+.. ...+..+++.++..+...... +-+ ...+
T Consensus 255 ~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~e~~L~~~~~~~L~~~~~v~i~g~~~~~r~~ 334 (405)
T COG0520 255 IEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAHERELTEYLLEGLSELPGVEIYGPPDADRGG 334 (405)
T ss_pred EEECCCCCCCEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCC
T ss_conf 44014455530156415315578437889869999999998579999999999999999998548984996466346774
Q ss_pred EEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCC-----CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 289995897999999999997791898622888888-----870399962878999999999999999988
Q gi|254780486|r 312 IQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPI-----NTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 312 I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~-----~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
++.+.+.. ..+.++...|.++||.++....++.|. -.+.+|++++..+|+||||+++++|+++..
T Consensus 335 ~vsF~v~~-~~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 335 IVSFNVKG-IHPHDVATLLDEKGIAVRAGHHCAQPLHRLLGVDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred EEEEEECC-CCHHHHHHHHHHCCEEEEECCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHC
T ss_conf 69999789-59899999998678699825644326787537777579997425999999999999998741
No 200
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.86 E-value=1.8e-18 Score=135.31 Aligned_cols=333 Identities=15% Similarity=0.098 Sum_probs=183.1
Q ss_pred CCHHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 86578999999999975983999289768980344656677988999999999986378688722443688589999999
Q gi|254780486|r 3 NIQMSFYEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEE 82 (381)
Q Consensus 3 ~~~~~~~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~ 82 (381)
.-++..+.+...+.++ .+++++||+-.+= .+...|.++++..++.+ .. +.+-+ .|...+-+++-+
T Consensus 3 ~~~~~~~~~~~~~~~~--------~~~~vI~L~iG~P-d~p~p~~i~~a~~~a~~-~~--~Y~~~---~G~~eLReaia~ 67 (357)
T TIGR03539 3 DFPWDSLAPYKAKAAS--------HPDGIVDLSVGTP-VDPVPPLIRAALAAAAD-AP--GYPQT---WGTPELREAIVD 67 (357)
T ss_pred CCHHHHHHHHHHHHHH--------CCCCEEECCCCCC-CCCCCHHHHHHHHHHHC-CC--CCCCC---CCCHHHHHHHHH
T ss_conf 8759999999998886--------8999288879999-99989999999997124-79--98998---477999999999
Q ss_pred HHHHHCC----CCCEEEECCCCHHHHHHH-HHH-CCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHH
Q ss_conf 9840128----885167416602456556-663-1689710045420267752666408764030568814789976431
Q gi|254780486|r 83 EAADFFG----FEKMLYFGSGYAANMAIL-STL-PQATDLIVYDKLVHASIREGINSGKAQAIAIPHNNINSFAENINKW 156 (381)
Q Consensus 83 ~lA~~~g----~e~al~~~sG~~An~~~i-~~l-~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD~~~Le~~l~~~ 156 (381)
.+.+.+| .++-++..+|....+..+ ..+ .+|||.|++-.-...+-..++++.+++.+.. +++++..
T Consensus 68 ~~~~~~g~~~~~~~~I~vt~G~~~al~~l~~~l~~~pGD~Vli~~P~y~~y~~~~~~~g~~~v~~-----d~~~~~~--- 139 (357)
T TIGR03539 68 WLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYEVGALLAGATPVAA-----DDPTELD--- 139 (357)
T ss_pred HHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHCCCEEEEC-----CCHHHCC---
T ss_conf 99997199979957599868879999999999707999989978887700899999859989823-----8866679---
Q ss_pred HHCCCCCCCEEEECCCCCCCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEE---EHHCCCCCCCCCCC
Q ss_conf 000247860797146215766134---689999986313608986131122234777640110---00013465210013
Q gi|254780486|r 157 RKSGGKGFPWIVVESIYSMDGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTH---IIEERNNVIVMHSC 230 (381)
Q Consensus 157 ~~~~~~~~~~vv~egv~Sm~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~---~~~~~~~~iv~~Tl 230 (381)
++...+|++-.=--=+|.+. .|++|.++|++||++++.||+|+--+++..--...+ ..+..+++|++.||
T Consensus 140 ----~~~~k~i~l~~P~NPTG~v~s~~~l~~l~~~a~~~~i~visDEiY~~~~~~~~~~s~l~~~~~~~~~~~~i~~~S~ 215 (357)
T TIGR03539 140 ----PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDPRVCGGDHTGLLAVHSL 215 (357)
T ss_pred ----CCCCEEEEECCCCCCCHHCCCHHHHHHHHHHCCCCEEEEECHHHHHHHCCCCCCCCCCCHHHCCCCCCCEEEEEEC
T ss_conf ----7785499989998962320828899999873205558995233247653589884302864537675767999615
Q ss_pred CCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHCCC
Q ss_conf 46565302---67524510010000121100001357750257898878988627102---2478999999998764179
Q gi|254780486|r 231 SKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL---HKSLLQLINITDKIANKKI 304 (381)
Q Consensus 231 sKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~---~~~l~~~~~~~~~~~~~~~ 304 (381)
||+|+..| ||+++++++++.+... +.+.... .|.+..+++.++++ ++... ++..+++...+.+ .....
T Consensus 216 SK~~~~~G~RiG~~~~~~~li~~l~~~-~~~~~~~-~~~~~q~a~~~al~---~~~~~~~~~~~~~~rr~~l~~-~L~~~ 289 (357)
T TIGR03539 216 SKRSNLAGYRAGFVAGDPALVAELLTV-RKHAGLM-VPAPVQAAMVAALG---DDGHVAEQKARYAARRAQLKP-ALEKA 289 (357)
T ss_pred CCCCCCCCCEEEEEECCHHHHHHHHHH-HHHCCCC-CCHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHHHH-HHHHC
T ss_conf 310045561289996799999999999-9856777-88999999999956---927899999999999999999-99857
Q ss_pred CCC---CCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 789---98972899958979999999999977918986228888888703999628789999999999999
Q gi|254780486|r 305 GFS---SQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDIL 372 (381)
Q Consensus 305 g~~---~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l 372 (381)
|+. +++. ..++...+.....+.+.|.++||.+.|..+= -+.+...+||+.. .++|++++.++.|
T Consensus 290 g~~~~~p~g~-~y~~~~~~~~~~~~~~~l~e~gV~v~PG~~F-g~~g~~~vRis~~--~~~e~l~eal~Rl 356 (357)
T TIGR03539 290 GFRIDHSEAG-LYLWATRGEDAWDTVDRLAELGILVAPGDFY-GPAGSQHVRVALT--ATDERIAAAVARL 356 (357)
T ss_pred CCEECCCCEE-EEEEEECCCCHHHHHHHHHHCCEEEECCCCC-CCCCCCEEEEEEC--CCHHHHHHHHHHC
T ss_conf 9776268806-9998758999999999999699899478744-7899997999972--9999999999857
No 201
>PRK06220 consensus
Probab=99.86 E-value=3.7e-18 Score=133.35 Aligned_cols=330 Identities=13% Similarity=0.112 Sum_probs=193.9
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC----CCCEEEECCCCHH
Q ss_conf 897689803446566779889999999999863786887224436885899999999840128----8851674166024
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG----FEKMLYFGSGYAA 102 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g----~e~al~~~sG~~A 102 (381)
.|+++++|+--|= .|...|.+++++.++++ .--++.+.+ .|..++.+++-+.+.+.+| .|..++.+.+..+
T Consensus 29 ~G~dvi~l~iG~p-df~~p~~i~~a~~~~~~-~~~~~Y~~~---~G~~~lreaia~~~~~~~g~~~~pd~I~vt~G~~~a 103 (384)
T PRK06220 29 QGRDIIHLEVGEP-DFPTPECVCEAACAAIE-RGLTHYTHS---LGLPELREAIAEHYRRRYGVDVDPDQVIVTSGTSPA 103 (384)
T ss_pred CCCCEEECCCCCC-CCCCCHHHHHHHHHHHH-CCCCCCCCC---CCCHHHHHHHHHHHHHHHCCCCCHHEEEECCCHHHH
T ss_conf 6998079999889-99978999999999985-499998999---786999999999999986899880128986888999
Q ss_pred HHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCC-------CHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
Q ss_conf 565566631689710045420267752666408764030568-------8147899764310002478607971462157
Q gi|254780486|r 103 NMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHN-------NINSFAENINKWRKSGGKGFPWIVVESIYSM 175 (381)
Q Consensus 103 n~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~Hn-------D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm 175 (381)
-..++.++++|||.|++..=...+....+++.+++.+.++-. |++++++.+. ++.+.+++.-.-..
T Consensus 104 l~~~~~~l~~pGD~Vlv~~P~Y~~~~~~~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~------~~~k~i~l~~P~NP- 176 (384)
T PRK06220 104 MLMVFMALLNKGDEVILSDPHYACYPNFVKFLGGTPVFVPVYEEDGFQYRPEAIRACLT------PRTKAILINSPSNP- 176 (384)
T ss_pred HHHHHHHHCCCCCEEEECCCCCCCCHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHCC------CCCEEEEECCCCCC-
T ss_conf 99999998189998997789887639999984983999224632376779999997478------88739997289998-
Q ss_pred CCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCC
Q ss_conf 661346899999863136089861311222347776401100001346521001346565302---67524510010000
Q gi|254780486|r 176 DGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLI 252 (381)
Q Consensus 176 ~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~ 252 (381)
.|.+.+..++.+|++ .++++|.||+|+--++...-. ..+...+++|+++||||+|+..| ||+.+++++++.+.
T Consensus 177 tG~v~s~e~l~~l~~-~~~~vIsDEiY~~l~~~~~~~---s~~~~~~~~i~~~S~SK~~~~~G~RiG~~i~~~~~i~~l~ 252 (384)
T PRK06220 177 TGHVLSPERLAGIAS-LGIPIISDEIYHGLVYEGREH---SILEFTDNAFVLNGFSKLYAMTGWRLGYLIVPPSCVRALQ 252 (384)
T ss_pred CCCCCCHHHHHHHHH-HCCEEEECCCHHHHCCCCCCC---CHHHCCCCEEEEEECHHHCCCCCCCEEEEEECHHHHHHHH
T ss_conf 786771999999873-098897246268641589988---8211478789997423530786535699998899999999
Q ss_pred CCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHH-HHHHHCCCCC--CCCCCE-EEEEECC-HHHHHHH
Q ss_conf 121100001357750257898878988627-10224789999999-9876417978--998972-8999589-7999999
Q gi|254780486|r 253 NYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINIT-DKIANKKIGF--SSQSHI-QSIVIGD-NKSCLNI 326 (381)
Q Consensus 253 ~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~-~~~~~~~~g~--~~~s~I-~~v~~gd-~~~a~~~ 326 (381)
.....+ +. ..+.+...++.++++..++. .++++.++++.++. +.+......+ ...+.. ..+.+.. .....++
T Consensus 253 ~~~~~~-~~-~~~~~~q~a~~~al~~~~~~~~~~~~~~~~~r~~l~~~L~~~~~~~~~~P~g~~y~~~~~~~~~~d~~~~ 330 (384)
T PRK06220 253 KLHQNF-FI-CANSVVQEAGIAALKQAQEDVARMRQIYNERRQYMIKRLREMGFGIRVEPTGAFYVLADARHLSGDSYAL 330 (384)
T ss_pred HHHHHC-CC-CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCHHHH
T ss_conf 999861-57-8987999999999958399999999999999999999999759985638985268857788789999999
Q ss_pred HHHHHH-CCEEEEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999997-791898622-8888888703999628789999999999999999887
Q gi|254780486|r 327 AKNLQK-KGFDIRAIR-PPTVPINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 327 ~~~L~~-~Gi~v~~i~-~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
+.+|++ .||.+.|.. |- +.+...+|++.. .++++|++.++.|+++++|
T Consensus 331 ~~~ll~~~gV~v~PG~~Fg--~~~~g~iRl~f~--~~~e~l~ea~~RL~~~l~~ 380 (384)
T PRK06220 331 AFDILEEAGVGVTPGIDFG--NGGEGYLRFSYA--NSLENIAEGLDRLEQFLEK 380 (384)
T ss_pred HHHHHHHCCEEEECCHHCC--CCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHH
T ss_conf 9999983999997781008--899997999970--9999999999999999998
No 202
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.86 E-value=1.2e-18 Score=136.27 Aligned_cols=334 Identities=13% Similarity=0.070 Sum_probs=176.3
Q ss_pred CCCCEEEECCCCCCCC---CCCCHHHHHHHHHHHHHHCCC-----CCCCCCCCCCCCHHHHHHHHHHHHHCCCC---CEE
Q ss_conf 2897689803446566---779889999999999863786-----88722443688589999999984012888---516
Q gi|254780486|r 26 LRRQDIWDFTSHDYLA---LSSSTLLREKILSSLDSKIPI-----GSGGSRLLCGNYNQHLELEEEAADFFGFE---KML 94 (381)
Q Consensus 26 ~~~~~~l~f~s~dYLG---l~~~p~v~~a~~~a~~~~~g~-----~~~~sr~~~G~~~~~~~lE~~lA~~~g~e---~al 94 (381)
.+|++++||+ .| +..-|.|++|+.++++. .++ |.+. ..|...+-+++-+.+.+.+|.+ +-+
T Consensus 31 ~~~~dvI~L~----iGePdf~tP~~i~eA~~~a~~~-~~~~~~~~gYt~---~~G~~eLReAIa~~~~~~~g~~~~~~~I 102 (409)
T PRK07590 31 NPEAKIIRLG----IGDVTQPLPPAVIEAMHKAVDE-MGTAETFRGYGP---EQGYDFLREKIAENDYQARGCDIDAEEI 102 (409)
T ss_pred CCCCCEEECC----CCCCCCCCCHHHHHHHHHHHHH-HCCCCCCCCCCC---CCCCHHHHHHHHHHHHHHHCCCCCHHHE
T ss_conf 8999866788----9897899999999999999983-012688785898---7474999999999999984899876886
Q ss_pred EECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCC--------CHHHHHHHH-HHHHHCCCCCCC
Q ss_conf 74166024565566631689710045420267752666408764030568--------814789976-431000247860
Q gi|254780486|r 95 YFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHN--------NINSFAENI-NKWRKSGGKGFP 165 (381)
Q Consensus 95 ~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~Hn--------D~~~Le~~l-~~~~~~~~~~~~ 165 (381)
++.+|....+..+.++..|||.|++-.=.-.+-.+.++++++........ ++.. |... .... ..+.+
T Consensus 103 ~vt~Ga~~~l~~i~~ll~pGDeViip~P~Yp~Y~~~~~laG~~~~~~~~~~~~~~~~~~~~~-e~~f~~~~~--~~ktk- 178 (409)
T PRK07590 103 FVSDGAKCDTGNILDIFGPDNTIAVTDPVYPVYVDTNVMAGRTGEANEDGRYEGIVYLPCTA-ENNFIPELP--SEKVD- 178 (409)
T ss_pred EECCCHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCCCCCCCCCCCCEEECCCCH-HHCCCCCCC--CCCEE-
T ss_conf 87486799999999983999989966887744698998748853013566556724655883-435474356--54602-
Q ss_pred EEEECCCCCCCCCH---HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCC-CEEEEEHHCCCCCCCCCCCCCCCCCEE---
Q ss_conf 79714621576613---46899999863136089861311222347776-401100001346521001346565302---
Q gi|254780486|r 166 WIVVESIYSMDGDK---APLDDLVKIANDYDGFIVVDEAHATGVCGPLG-KGLTHIIEERNNVIVMHSCSKALGSSG--- 238 (381)
Q Consensus 166 ~vv~egv~Sm~G~~---apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G-~G~~~~~~~~~~~iv~~TlsKa~g~~G--- 238 (381)
+|++-+=--=+|.+ ..|++|+++|++||++++.||+|+.-++.+.- ..+.+.-+..++.|.+.||||+|+..|
T Consensus 179 ~iilnsP~NPTG~V~s~eel~~i~~~a~~~~i~iisDEiY~~~~~~~~~p~si~~~~~~~~~~I~i~s~SK~~~mtGwRi 258 (409)
T PRK07590 179 IIYLCFPNNPTGTVATKEQLKAWVDYAKANGSLILFDAAYEAFISDPSIPHSIYEIEGAKECAIEFRSFSKNAGFTGTRC 258 (409)
T ss_pred EEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECHHHCCCCCCCE
T ss_conf 99984898995655799999999999987497899707620013689877577654655014689713526407864436
Q ss_pred EEEECCCCCCCCCCC-----------CCCCEECCCCCCCCHHHHHHHHHHHH--HHCCCHHHHHHHHHHHHHHHHHCCCC
Q ss_conf 675245100100001-----------21100001357750257898878988--62710224789999999987641797
Q gi|254780486|r 239 ALVGSNKIIYDYLIN-----------YAKPFIYTTSPSPILAVVACEALKLI--KRKPALHKSLLQLINITDKIANKKIG 305 (381)
Q Consensus 239 G~i~~~~~ii~~l~~-----------~~~~~ifst~l~P~~~aaa~aal~~l--~~~~~~~~~l~~~~~~~~~~~~~~~g 305 (381)
||++++++++..... +-....|++...|.. .++.+++.-- ..-.++.+..+++..+..+ .....|
T Consensus 259 G~~v~P~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q-~aa~a~l~~~~~~~~~~~~~~y~~rr~~~~~-~L~~~g 336 (409)
T PRK07590 259 AYTVVPKELKGKDSEGEIVDLNSLWNRRQSTKFNGVSYIVQ-RGAEAVYSPEGQAQIKELISYYMENAKIIRE-GLEAAG 336 (409)
T ss_pred EEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH-HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH-HHHHCC
T ss_conf 98975799998864446999999999875025578689999-9999996548789999999999999999999-999759
Q ss_pred CCC---CC-CEEEEEECCHHHHHHHHHHHHH-CCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 899---89-7289995897999999999997-79189862288888887039996287899999999999999998
Q gi|254780486|r 306 FSS---QS-HIQSIVIGDNKSCLNIAKNLQK-KGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 306 ~~~---~s-~I~~v~~gd~~~a~~~~~~L~~-~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
+.. .+ .-+.+-+.+.....+++++|++ .||.+.|...= -+.|...+|++.. .+++++++.++.|++++
T Consensus 337 ~~~~~p~gafY~w~~~~~~~~~~ef~~~Ll~e~~Vav~PG~~F-G~~g~g~vRls~a--~~~e~l~ea~~Ri~~~L 409 (409)
T PRK07590 337 FTVYGGVNAPYIWVKTPDGLSSWDFFDKLLQEANVVGTPGSGF-GPAGEGYFRLSAF--GSRENVLEAMERIKKLL 409 (409)
T ss_pred CEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHH-CCCCCCEEEEEEC--CCHHHHHHHHHHHHHHC
T ss_conf 7672799723898889999898999999998699999686465-8999896999972--89999999999999859
No 203
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.86 E-value=7.6e-19 Score=137.62 Aligned_cols=325 Identities=12% Similarity=0.114 Sum_probs=191.3
Q ss_pred EECCCCCCCCCCC----CHHHHHHHHHHHHHHCCCC-CCCCCCCCCCCHHHHHHHHHHHHHCCC----CCEEEECCC-CH
Q ss_conf 9803446566779----8899999999998637868-872244368858999999998401288----851674166-02
Q gi|254780486|r 32 WDFTSHDYLALSS----STLLREKILSSLDSKIPIG-SGGSRLLCGNYNQHLELEEEAADFFGF----EKMLYFGSG-YA 101 (381)
Q Consensus 32 l~f~s~dYLGl~~----~p~v~~a~~~a~~~~~g~~-~~~sr~~~G~~~~~~~lE~~lA~~~g~----e~al~~~sG-~~ 101 (381)
+||+ +|=.. .|+.++++.+++.+ -|.+ .+.+ .|..++-+++-+.+.+.+|. ++-++..+| -.
T Consensus 42 id~~----~G~pD~~~PtP~~i~~~~~~~~~-~g~~~Yt~~---~G~~eLReAia~~~~~~~g~~~d~~d~Iivt~G~~~ 113 (406)
T PRK06207 42 VDFS----HGDVDAHEPTPGSLELFSQGVER-GGVQAYTEY---RGDLEIRELVAARLAEFTGAPVDARDGLIITPGTQG 113 (406)
T ss_pred CCCC----CCCCCCCCCCCHHHHHHHHHHHH-CCCCCCCCC---CCHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHH
T ss_conf 2378----89999999986999999999973-899889998---672999999999999986899998786998587799
Q ss_pred HHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC-----------CCHHHHHHHHHHHHHCCCCCCCEEEEC
Q ss_conf 456556663168971004542026775266640876403056-----------881478997643100024786079714
Q gi|254780486|r 102 ANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPH-----------NNINSFAENINKWRKSGGKGFPWIVVE 170 (381)
Q Consensus 102 An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H-----------nD~~~Le~~l~~~~~~~~~~~~~vv~e 170 (381)
|...++.++..|||.|++-.=.-.+-...+++.++++++++= -|+++|++.+.. +.+.+|+.-
T Consensus 114 al~~a~~al~~pGDeViv~~P~y~~y~~~i~~~g~~~vpv~l~~~~~~~~~~~~d~d~le~~i~~------~tk~iil~n 187 (406)
T PRK06207 114 ALFLAVASTVTRGDKVAIVQPDYFANRKLVEFFEGEIVPVQLDYVSVDETRAGLDLDQLEAAFKA------GVRVFLFSN 187 (406)
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHHHHHCCC------CCEEEEECC
T ss_conf 99999999758998799978987457999998298799985677677634468999999974544------876999889
Q ss_pred CCCCCCCCH---HHHHHHHHHHHHCCEEEEECCCCCCCCCC-CCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEEC
Q ss_conf 621576613---46899999863136089861311222347-776401100001346521001346565302---67524
Q gi|254780486|r 171 SIYSMDGDK---APLDDLVKIANDYDGFIVVDEAHATGVCG-PLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGS 243 (381)
Q Consensus 171 gv~Sm~G~~---apL~~i~~l~~~y~~~LivDEah~~Gv~G-~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~ 243 (381)
.=.. .|.+ ..|++|.++|++||++++.||+|+--++. +.-..+.......+++|++.+|||+|+..| ||+.+
T Consensus 188 P~NP-TG~v~s~e~l~~l~~la~~~~i~visDEiY~~l~ydg~~~~~~~~~~~~~~~~I~~~s~SK~~~m~G~RlG~~~~ 266 (406)
T PRK06207 188 PNNP-AGVVYSPEEIAQIAALARRYGATVIADQLYSRLRYAGASYTHLRALAVDPENVITIMGPSKTESLSGYRLGVAFG 266 (406)
T ss_pred CCCC-CCHHCCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCHHHCCCCCCCEEEEEECHHHHHCCCCCEEEEEC
T ss_conf 9798-572133999999999875579599996466454558988778766357767679975132443122562488978
Q ss_pred CCCCCCCCCCCCCCEECCCCCCCCHH-HHHHHHHHHHHHCCC-HHHHHHHHHHHHHHHH--HCCC-CCC---CCCC-EEE
Q ss_conf 51001000012110000135775025-789887898862710-2247899999999876--4179-789---9897-289
Q gi|254780486|r 244 NKIIYDYLINYAKPFIYTTSPSPILA-VVACEALKLIKRKPA-LHKSLLQLINITDKIA--NKKI-GFS---SQSH-IQS 314 (381)
Q Consensus 244 ~~~ii~~l~~~~~~~ifst~l~P~~~-aaa~aal~~l~~~~~-~~~~l~~~~~~~~~~~--~~~~-g~~---~~s~-I~~ 314 (381)
++++++.+... ..+ ++..++..+ +++.++++ +.+. +.+.+.+..+.++.+. ...+ ++. ++.. .+.
T Consensus 267 ~~~li~~~~~~-~~~--~~~~~~~~~Q~a~~~~l~---~~~~~~~~~~~~~~~~R~~l~~~l~~~~g~~~~~P~gg~yl~ 340 (406)
T PRK06207 267 SPAIIARMEKL-QAI--VSLRAAGYCQAVLRTWFD---EPPGWMEDRIAQHQAIRDDLIRVLRGIDGVFARAPEAGSYLF 340 (406)
T ss_pred CHHHHHHHHHH-HHH--HCCCCHHHHHHHHHHHHH---CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEE
T ss_conf 99999999999-988--436842999999999996---779999999999999999999998508995745899148996
Q ss_pred EEECC-HHHHHHHHHHHH-HCCEEEEEEC-CCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99589-799999999999-7791898622-8888888703999628789999999999999999887387
Q gi|254780486|r 315 IVIGD-NKSCLNIAKNLQ-KKGFDIRAIR-PPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGNS 381 (381)
Q Consensus 315 v~~gd-~~~a~~~~~~L~-~~Gi~v~~i~-~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~s 381 (381)
+.+.+ .....++++.|+ +.||.+.|.. | -|.+...+||+.. .+++++.+.++.|.+++++.-+
T Consensus 341 ~~l~~~~~~~~~f~~~Ll~e~gVav~PG~~F--G~~~~~~vRlsfa--~~~e~l~eal~RL~~~l~~yra 406 (406)
T PRK06207 341 PRLPKLAVGLADFVKILRLQAGVVVTPGTEF--SPHTADSIRLNFS--QDHAAAVAAVERIAALIERYRA 406 (406)
T ss_pred EECCCCCCCHHHHHHHHHHHCCEEEECCHHH--CCCCCCEEEEEEC--CCHHHHHHHHHHHHHHHHHHCC
T ss_conf 8888889999999999998589999886565--8999897999973--9899999999999999998559
No 204
>PRK06575 consensus
Probab=99.86 E-value=4.4e-18 Score=132.87 Aligned_cols=348 Identities=11% Similarity=0.088 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 57899999999997598399928976898034465667798899999999998637868872244368858999999998
Q gi|254780486|r 5 QMSFYEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEA 84 (381)
Q Consensus 5 ~~~~~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~l 84 (381)
++.-+.++..+++++ |+++++|+--| -.+...|.|++++.++++ .--++.+.+. |...+.+.+-+.+
T Consensus 15 ~~~~i~~~a~~l~~~--------G~dvi~L~iG~-pdf~~p~~i~~a~~~a~~-~g~~~Y~~~~---G~~~Lr~aia~~~ 81 (399)
T PRK06575 15 PTLAVVKKTLELKKA--------GVDIIALGAGE-PDFDTPDNIKEAAIKAIK-DGFTKYTNVE---GMPLLKQAIKDKF 81 (399)
T ss_pred HHHHHHHHHHHHHHC--------CCCEEECCCCC-CCCCCCHHHHHHHHHHHH-CCCCCCCCCC---CCHHHHHHHHHHH
T ss_conf 999999999999977--------99837788958-999969999999999985-5999889987---8399999999999
Q ss_pred HHHCC----CCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC---CC----CHHHHHHHH
Q ss_conf 40128----88516741660245655666316897100454202677526664087640305---68----814789976
Q gi|254780486|r 85 ADFFG----FEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP---HN----NINSFAENI 153 (381)
Q Consensus 85 A~~~g----~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~---Hn----D~~~Le~~l 153 (381)
.+.+| .+..++++.+..|-..++.+++.|||.|++-.=...+-...+.+++++.+.++ .| |+++|++.+
T Consensus 82 ~~~~~~~~~~d~i~vt~G~~~al~~~~~~l~~pGD~Vli~~P~y~~y~~~~~~~~~~~v~~~~~~e~~~~~d~e~l~~~~ 161 (399)
T PRK06575 82 KRENNIDYELDEIIVSTGGKQVIYNLFMASLDKGDEVIIPAPYWVSYPDMVALSTGTPVFVNCGIENNFKLSAEALERSI 161 (399)
T ss_pred HHHHCCCCCHHEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHC
T ss_conf 99858999843199948952899999998658999899747853235899998288569941575546555899998644
Q ss_pred HHHHHCCCCCCCEEEECCCCCCCCCHH---HHHHHHHHHHHC-CEEEEECCCCCCCCCCCCC-CEEEEE-HHCCCCCCCC
Q ss_conf 431000247860797146215766134---689999986313-6089861311222347776-401100-0013465210
Q gi|254780486|r 154 NKWRKSGGKGFPWIVVESIYSMDGDKA---PLDDLVKIANDY-DGFIVVDEAHATGVCGPLG-KGLTHI-IEERNNVIVM 227 (381)
Q Consensus 154 ~~~~~~~~~~~~~vv~egv~Sm~G~~a---pL~~i~~l~~~y-~~~LivDEah~~Gv~G~~G-~G~~~~-~~~~~~~iv~ 227 (381)
.. +.+.+++.-.-.. .|.+. .|++|.++|++| +++++.||+|+.-++.... ..+... -+..+++|++
T Consensus 162 ~~------~~k~iil~nP~NP-TG~v~~~eel~~i~~~~~k~~~v~iisDEiY~~~~~~~~~~~s~~~~~~~~~~~~i~~ 234 (399)
T PRK06575 162 TD------KTKWLIINSPSNP-TGASYNFEELENIAKVLRKYPHVNVMSDDIYEHITFDDFKFYTLAQIAPDLKERIFTV 234 (399)
T ss_pred CC------CCEEEEECCCCCC-CCCCCCHHHHHHHHHHHHHCCCEEEECHHHHHHHCCCCCCCCCHHHHCCCCCCCEEEE
T ss_conf 44------7679998999999-8887889999999999874587378421356664168987741133076542232574
Q ss_pred CCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCC
Q ss_conf 01346565302---67524510010000121100001357750257898878988627-102247899999999876417
Q gi|254780486|r 228 HSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKK 303 (381)
Q Consensus 228 ~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~ 303 (381)
.||||+|+..| ||+++++++++.+... ..+..++ .+.....++.++++..++- .+.+..++++..+........
T Consensus 235 ~s~SK~~~~~G~RiG~~~~~~~~i~~~~~~-~~~~~~~-~~~~~q~aa~~al~~~~~~~~~~~~~~~~~r~~~~~~l~~~ 312 (399)
T PRK06575 235 NGVSKAYSMTGWRIGYGAGSKALIKAMTII-QSQSTSN-PCSISQMAAIEALNGPQDYIKPNALNFQKKRDLALSILKRV 312 (399)
T ss_pred CCCCCCCCCCCCCEEEEECCHHHHHHHHHH-HHCCCCC-CCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 142101478772337530879999999999-9615678-66899999999985847789999999999999999998647
Q ss_pred CCCC---CCCCE-EEEEEC----C-------HHHHHHHHHHHHHC-CEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHH
Q ss_conf 9789---98972-899958----9-------79999999999977-9189862288888887039996287899999999
Q gi|254780486|r 304 IGFS---SQSHI-QSIVIG----D-------NKSCLNIAKNLQKK-GFDIRAIRPPTVPINTARLRISITLNVDEPTIVK 367 (381)
Q Consensus 304 ~g~~---~~s~I-~~v~~g----d-------~~~a~~~~~~L~~~-Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~ 367 (381)
.++. ++... ..+-+. . .....+++++|+++ ||.+.|...=-. .+.+|++.. .++++|++
T Consensus 313 ~~~~~~~P~G~~yl~~~~~~~~~~~~~~~~~~~~~~~f~~~Ll~e~~V~v~PG~~FG~---~g~~Rl~~a--~~~e~l~e 387 (399)
T PRK06575 313 KYFECYKPEGAFYLFVKCDKIFGHKTKSGKIIANSNDFAEYLLEEAKVAVVPGIAFGL---EGYFRISYA--TSMEELEE 387 (399)
T ss_pred CCCEEECCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCC---CCEEEEEEC--CCHHHHHH
T ss_conf 9844617992379957773001544434676789999999999729999984855589---983999973--98999999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999998873
Q gi|254780486|r 368 LFDILPQIISEG 379 (381)
Q Consensus 368 ~~~~l~~v~~E~ 379 (381)
.++.|++.++.+
T Consensus 388 a~~Rl~~a~~~L 399 (399)
T PRK06575 388 ACIRIERACNVL 399 (399)
T ss_pred HHHHHHHHHHHC
T ss_conf 999999999749
No 205
>KOG1403 consensus
Probab=99.85 E-value=3.5e-20 Score=145.92 Aligned_cols=335 Identities=16% Similarity=0.193 Sum_probs=220.4
Q ss_pred CCCEEEECCCCCCCCC--------CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECC
Q ss_conf 8976898034465667--------79889999999999863786887224436885899999999840128885167416
Q gi|254780486|r 27 RRQDIWDFTSHDYLAL--------SSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGS 98 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl--------~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~s 98 (381)
.++-+.|=-++-||.- --||+|++|..+++. +.++-+|++. ..+-+-.+...+.+-+..-|+++||
T Consensus 37 q~QYmfDE~g~~yLDCInNVaHvghchp~VV~A~~kQma----t~~tN~RFlh--d~lv~cA~~l~stlPeLsvc~F~NS 110 (452)
T KOG1403 37 QGQYMFDEEGTRYLDCINNVAHVGHCHPEVVRAGAKQMA----TISTNNRFLH--DELVQCARTLTSTLPELSVCFFVNS 110 (452)
T ss_pred CCCEEECCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHH----HHCCCCHHHH--HHHHHHHHHHHHCCCCCEEEEEECC
T ss_conf 001111567663888764221125578999999998876----7504524667--7899999998610878518999668
Q ss_pred CCHHHHHHHH---HHCCCCCCCCHHHHCCHHHHHHHHHCCCC------------------------CEEECCCCH-----
Q ss_conf 6024565566---63168971004542026775266640876------------------------403056881-----
Q gi|254780486|r 99 GYAANMAILS---TLPQATDLIVYDKLVHASIREGINSGKAQ------------------------AIAIPHNNI----- 146 (381)
Q Consensus 99 G~~An~~~i~---~l~~~~d~ii~D~~~HaSi~~g~~ls~a~------------------------~~~f~HnD~----- 146 (381)
|..||--++. -+.+..|+|..|...|.-+..-+.+|.-+ .++-+|++.
T Consensus 111 GSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcPDvyrGK~r~~~~~~a~~~~ 190 (452)
T KOG1403 111 GSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCPDVYRGKFRDKMYPDADMGA 190 (452)
T ss_pred CCHHHHHHHHHHHHHCCCCCEEEEECHHCCCEEEEEECCCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 86155899999875125675488730003430014650644306898857876167457863125612201387665004
Q ss_pred ---HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEE--EE
Q ss_conf ---47899764310002478607971462157661346----8999998631360898613112223477764011--00
Q gi|254780486|r 147 ---NSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLT--HI 217 (381)
Q Consensus 147 ---~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~--~~ 217 (381)
++.++.+.....+ +++....+.|++-|-.|.+.| .+++.+-.+.+|.+.|.||++ .| +|+-|+-++ +.
T Consensus 191 ~Yad~vk~I~~d~~~~-g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEVQ-vG-FGRvG~hyWafq~ 267 (452)
T KOG1403 191 LYADPVKEICQDQLAK-GQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEVQ-VG-FGRVGSHYWAFQT 267 (452)
T ss_pred HHHHHHHHHHHHHHHC-CCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEEEEEHHH-HC-CCCCCHHHHHHHH
T ss_conf 4303799999999852-7757999999998569813584327899999985179769842121-04-3323103544445
Q ss_pred HHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 001346521001346565302---67524510010000121100001357750257898878988627102247899999
Q gi|254780486|r 218 IEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLIN 294 (381)
Q Consensus 218 ~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~ 294 (381)
++..|+++ |++|.+| .| +.|+..+++.+.+-..+-.|.-|-+.+|..||+.++.+++++++. +++..++..+
T Consensus 268 y~fiPDIV---tmgKpmG-NGhPVa~VattkeIA~Af~atgv~YFNTyGGnPVsCAv~laVm~v~e~E~-Lq~ha~~vG~ 342 (452)
T KOG1403 268 YNFIPDIV---TMGKPMG-NGHPVAAVATTKEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMRVCEDEN-LQEHAQQVGE 342 (452)
T ss_pred HCCCCCHH---EECCCCC-CCCEEEEEECCHHHHHHHCCCCCEEHHCCCCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_conf 24564330---0046577-99702688536889998502660000046998065899999999974566-7788998879
Q ss_pred HHHHH----HHCC--CC-CCCCCCEEEEE--------ECCHHHHHHHHHHHHHC-CEEEEEECCCCCCCCCCEEEEECCC
Q ss_conf 99987----6417--97-89989728999--------58979999999999977-9189862288888887039996287
Q gi|254780486|r 295 ITDKI----ANKK--IG-FSSQSHIQSIV--------IGDNKSCLNIAKNLQKK-GFDIRAIRPPTVPINTARLRISITL 358 (381)
Q Consensus 295 ~~~~~----~~~~--~g-~~~~s~I~~v~--------~gd~~~a~~~~~~L~~~-Gi~v~~i~~PtVp~~~~rlRi~v~a 358 (381)
++..+ ..+. +| +.+-.-.+.|. .++.+.+..+..+|.+. +++++.=. .++..|.|-++.
T Consensus 343 ~L~~lL~~~k~kh~~IGDvRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlke~y~VLlsaDG-----Ph~NilKiKPPm 417 (452)
T KOG1403 343 KLEVLLRRLKQKHECIGDVRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLKELYRVLLSADG-----PHRNILKIKPPM 417 (452)
T ss_pred HHHHHHHHHHHHCCCEECCCCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHEEEECCC-----CCCCEEECCCCC
T ss_conf 999999987650613101333227885200011123797378799999999886407870689-----987636437984
Q ss_pred CCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 8999999999999999988738
Q gi|254780486|r 359 NVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 359 ~~t~edi~~~~~~l~~v~~E~~ 380 (381)
..++|+++.++..|++++.-|+
T Consensus 418 CFneena~e~v~~ld~iLT~me 439 (452)
T KOG1403 418 CFNEENADEFVLGLDEILTVME 439 (452)
T ss_pred CCCHHHHHHHHHHHHHHHHHHH
T ss_conf 3473129999998999999999
No 206
>PRK09147 aminotransferase; Provisional
Probab=99.85 E-value=8e-18 Score=131.24 Aligned_cols=343 Identities=12% Similarity=0.120 Sum_probs=186.7
Q ss_pred HHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 99999999759839992897689803446566779889999999999863786887224436885899999999840128
Q gi|254780486|r 10 EERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG 89 (381)
Q Consensus 10 ~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g 89 (381)
-.+|.++.++ ..--+|++++||+--+= .+..-+.+++|..++++ . .++.+.++ |...+-+++-+.+.+-+|
T Consensus 13 ~~~~~~~~~~---~~~~~~~~vI~L~iG~P-d~~~P~~v~~a~~~a~~-~-~~~Y~~~~---G~~~LReaia~~~~~~~g 83 (397)
T PRK09147 13 FEKLRALFAG---VTPPADLPPISLSIGEP-KHPTPAFVRDALAANLD-G-LAVYPTTA---GLPALRQAIARWLERRYG 83 (397)
T ss_pred HHHHHHHHHH---CHHCCCCCEEECCCCCC-CCCCCHHHHHHHHHHHC-C-CCCCCCCC---CCHHHHHHHHHHHHHHCC
T ss_conf 9999999850---40138998587648889-99978999999999862-8-77899997---849999999999998709
Q ss_pred C-----CCEEEECCCC-HHHHHHHHHHCCCCCC---CCH-HHHCCHHHHHHHHHCCCCCEEECC-------CCHHHHHHH
Q ss_conf 8-----8516741660-2456556663168971---004-542026775266640876403056-------881478997
Q gi|254780486|r 90 F-----EKMLYFGSGY-AANMAILSTLPQATDL---IVY-DKLVHASIREGINSGKAQAIAIPH-------NNINSFAEN 152 (381)
Q Consensus 90 ~-----e~al~~~sG~-~An~~~i~~l~~~~d~---ii~-D~~~HaSi~~g~~ls~a~~~~f~H-------nD~~~Le~~ 152 (381)
. +.-++..+|. .|-..++.++..++|. |++ |-.-. +-...+.+.+++.+.++- -|+++|++.
T Consensus 84 ~~~~~~~~~v~vt~Ga~~al~~~~~a~l~~gd~g~~Vl~~~P~Y~-~y~~~~~~~G~~~v~vp~~~e~~~~~d~~~l~~~ 162 (397)
T PRK09147 84 LPAVDPATQVLPVNGSREALFAFAQTVIDRSDPGPLVVCPNPFYQ-IYEGAALLAGAEPYFLNCDPANGFAPDFDAVPAE 162 (397)
T ss_pred CCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCEEEECCCCCC-CCHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHH
T ss_conf 986785746998888289999999860588898888996888787-7499999769868992357122777697898987
Q ss_pred HHHHHHCCCCCCCEEEECCCCCCCCCH---HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCE--E---EEEHH--CCC
Q ss_conf 643100024786079714621576613---4689999986313608986131122234777640--1---10000--134
Q gi|254780486|r 153 INKWRKSGGKGFPWIVVESIYSMDGDK---APLDDLVKIANDYDGFIVVDEAHATGVCGPLGKG--L---THIIE--ERN 222 (381)
Q Consensus 153 l~~~~~~~~~~~~~vv~egv~Sm~G~~---apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G--~---~~~~~--~~~ 222 (381)
+.. +.+.+++.-.=.. .|.+ ..|++|+++|++||++++.||+|+--++...... . +...+ ..+
T Consensus 163 i~~------~tk~iil~sP~NP-TG~v~s~e~l~~l~~la~~~~i~iisDEiY~~l~~d~~~~p~~~~~~~~~~~~~~~~ 235 (397)
T PRK09147 163 VWA------RTQLLFVCSPGNP-TGAVLPLDDWKKLFALSDRYGFVIASDECYSEIYFDEAAPPLGLLEAAAELGRDDFK 235 (397)
T ss_pred HHH------CCCEEEECCCCCC-CCCCCCHHHHHHHHHHHCCCEEEEEECCCCCCCEECCCCCCHHHHHHHHHHCCCCCC
T ss_conf 311------2748986899898-899888899999999632472899982686521547987981577777762656568
Q ss_pred CCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHH---HHHHHHHHH
Q ss_conf 6521001346565302---6752451001000012110000135775025789887898862710224---789999999
Q gi|254780486|r 223 NVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHK---SLLQLINIT 296 (381)
Q Consensus 223 ~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~---~l~~~~~~~ 296 (381)
++|++.||||+|+..| ||+++++++++.+... +.+. +.+.+++...++.+++. .+....+ ..++.....
T Consensus 236 ~~I~~~S~SK~~~~~G~RiG~i~~~~~li~~~~~~-~~~~-~~~~~~~~q~A~~aa~~---~~~~~~~~r~~~~~r~~~~ 310 (397)
T PRK09147 236 RLVVFHSLSKRSNVPGLRSGFVAGDAALLKKFLLY-RTYH-GCAMPPQVQLASIAAWN---DEAHVRENRALYREKFDAV 310 (397)
T ss_pred CEEEECCCCCCCCCCCCCEEEEECCHHHHHHHHHH-HHHH-HCCCCHHHHHHHHHHHC---CCHHHHHHHHHHHHHHHHH
T ss_conf 68998157210367665258886899999999997-3542-22578999999999856---8367999999999999999
Q ss_pred HHHHHCCCCCCC-C-CCEEEEEECCHHHHHHHHHHHH-HCCEEEEEECC---CC--CCCCCCEEEEECCCCCCHHHHHHH
Q ss_conf 987641797899-8-9728999589799999999999-77918986228---88--888870399962878999999999
Q gi|254780486|r 297 DKIANKKIGFSS-Q-SHIQSIVIGDNKSCLNIAKNLQ-KKGFDIRAIRP---PT--VPINTARLRISITLNVDEPTIVKL 368 (381)
Q Consensus 297 ~~~~~~~~g~~~-~-s~I~~v~~gd~~~a~~~~~~L~-~~Gi~v~~i~~---Pt--Vp~~~~rlRi~v~a~~t~edi~~~ 368 (381)
.......+.+.. + +-.+.+-+.+. ...+++++|+ +.||.+.|..+ .+ ...|+..+|++.. .+++++...
T Consensus 311 ~~~l~~~~~~~~P~gg~ylw~~~~~~-~~~~f~~~Ll~~~gV~v~PGs~F~~~~~g~~~G~g~vRl~~a--~~~e~l~ea 387 (397)
T PRK09147 311 TPILAPVLDVQLPDAGFYLWAKVPGG-DDTAFARRLYADYNVTVLPGSYLAREAHGVNPGAGRVRIALV--APLAECVEA 387 (397)
T ss_pred HHHHHCCCCCCCCCEEEEEEEECCCC-CHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEEEEEEC--CCHHHHHHH
T ss_conf 99873379877889735998868999-989999999996899998681004233478889988999974--989999999
Q ss_pred HHHHHHHHH
Q ss_conf 999999988
Q gi|254780486|r 369 FDILPQIIS 377 (381)
Q Consensus 369 ~~~l~~v~~ 377 (381)
++.|++.++
T Consensus 388 l~Rl~~~l~ 396 (397)
T PRK09147 388 AERIVDFLR 396 (397)
T ss_pred HHHHHHHHC
T ss_conf 999999972
No 207
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.84 E-value=3.3e-18 Score=133.64 Aligned_cols=304 Identities=18% Similarity=0.184 Sum_probs=192.3
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHC-CCCCCCCHHHHC
Q ss_conf 8899999999998637868872244368858999999998401288851674166024565566631-689710045420
Q gi|254780486|r 45 STLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLP-QATDLIVYDKLV 123 (381)
Q Consensus 45 ~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~-~~~d~ii~D~~~ 123 (381)
..+-.+++.+.++..| +..| +..+++|+++|+++|...|+.++||+.|-..++.++- +++|.|+.-...
T Consensus 13 ~~~e~~~v~~~l~sg~--------~~~G--~~v~~FE~~~a~~~g~k~av~v~sgT~AL~lal~al~i~~gdeVi~p~~t 82 (379)
T PRK11658 13 GDEEIAAVKEVLRSGW--------ITTG--PKNQELEQAFCQLTGNQHAIAVSSATAGMHITLMALGIGPGDEVITPSQT 82 (379)
T ss_pred CHHHHHHHHHHHHCCC--------CCCC--HHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCC
T ss_conf 9999999999996698--------6788--77999999999997869499976889999999998698883999989955
Q ss_pred CHHHHHHHHHCCCCCEEECC------CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEE
Q ss_conf 26775266640876403056------881478997643100024786079714621576613468999998631360898
Q gi|254780486|r 124 HASIREGINSGKAQAIAIPH------NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIV 197 (381)
Q Consensus 124 HaSi~~g~~ls~a~~~~f~H------nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~Li 197 (381)
..+....+...|++.+...- -|++++|+.+.. +.+.+|+|. +-|-.+++++|.++|++||..+|
T Consensus 83 f~at~~ai~~~Ga~pvf~Did~~t~~id~~~~e~~it~------~tkaIi~Vh----~~G~~~d~~~i~~i~~~~~i~vI 152 (379)
T PRK11658 83 WVSTLNMIVLLGATPVMVDVDRDTLMVTPEAIEAAITP------RTKAIIPVH----YAGAPADLDAIRAIGERYGIPVI 152 (379)
T ss_pred HHHHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHCCC------CCEEEEEEC----CCCCCCCHHHHHHHHHHCCCEEE
T ss_conf 69999999981998997457456535488999865482------654999856----88986637799999997598189
Q ss_pred ECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCC--CCCCCC-EEEEEEC-CCCCCCCC---CCCCCC------------E
Q ss_conf 613112223477764011000013465210013--465653-0267524-51001000---012110------------0
Q gi|254780486|r 198 VDEAHATGVCGPLGKGLTHIIEERNNVIVMHSC--SKALGS-SGALVGS-NKIIYDYL---INYAKP------------F 258 (381)
Q Consensus 198 vDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~Tl--sKa~g~-~GG~i~~-~~~ii~~l---~~~~~~------------~ 258 (381)
-|-||++|..- .|+- .|....-+. || .|-+.+ -||+|.. ++++.+.+ |+++.. .
T Consensus 153 EDaA~a~Ga~~-~g~~----~Gs~g~a~f--SF~~~K~ittGeGG~ivtnd~~l~~~~r~lr~hG~~~~~~~~~~~g~~~ 225 (379)
T PRK11658 153 EDAAHAVGTYY-KGRH----IGARGTAIF--SFHAIKNITCAEGGLIVTDDEELADRLRMLKFHGLGVDAYDRQTQGRAP 225 (379)
T ss_pred ECCHHHHCCCC-CCCC----CCCCCCEEE--ECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCHHHHHCCCCCC
T ss_conf 70835536654-7986----676244578--5666667877787499969999999999999779886513443037888
Q ss_pred E-------CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH-HHHHHHHCC---CCCC---C--CCCEEEEEECCHH-
Q ss_conf 0-------01357750257898878988627102247899999-999876417---9789---9--8972899958979-
Q gi|254780486|r 259 I-------YTTSPSPILAVVACEALKLIKRKPALHKSLLQLIN-ITDKIANKK---IGFS---S--QSHIQSIVIGDNK- 321 (381)
Q Consensus 259 i-------fst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~-~~~~~~~~~---~g~~---~--~s~I~~v~~gd~~- 321 (381)
- |.--|+-..++..+..|+.+.+. .++.+++.. |.+.+.... +..+ . ..+..++.+....
T Consensus 226 ~~~~~~~G~N~rm~elqAAigl~qL~~ld~~---~~~R~~ia~~Y~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 302 (379)
T PRK11658 226 QAEVLEPGYKYNLADINAAIALVQLQKLEAL---NARRRAIAAQYLQALAALPFQPLSLPAWPHQHAWHLFIIRVDEERC 302 (379)
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECHHHC
T ss_conf 6226655613677778799999999999999---9999999999999726899866678898874110789999864635
Q ss_pred --HHHHHHHHHHHCCEEEEEECCCCC---------CC----C-----CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf --999999999977918986228888---------88----8-----703999628789999999999999999887
Q gi|254780486|r 322 --SCLNIAKNLQKKGFDIRAIRPPTV---------PI----N-----TARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 322 --~a~~~~~~L~~~Gi~v~~i~~PtV---------p~----~-----~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
.--++.+.|.++||-+....+|.- |. + ...|.+-++..+|++|+++.++++++++.|
T Consensus 303 ~~~Rd~l~~~L~~~gI~t~~~y~p~h~~~~~~~~~~~~~lpnae~~~~~~lsLP~~~~Lt~~di~~Ii~~ik~i~~q 379 (379)
T PRK11658 303 GISRDALMEALKERGIGTGLHFRAAHTQKYYRERFPTLSLPNTEWNSERICSLPLFPDMTDSDVDRVITALQQIAGQ 379 (379)
T ss_pred CCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 44899999999977998120274200489888159878998999998488989899897999999999999999773
No 208
>pfam01276 OKR_DC_1 Orn/Lys/Arg decarboxylase, major domain.
Probab=99.84 E-value=2.7e-19 Score=140.45 Aligned_cols=258 Identities=17% Similarity=0.148 Sum_probs=161.4
Q ss_pred HHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHH---HHHHHHHHHHHHCC--CCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 99999999759839992897689803446566779889---99999999986378--68872244368858999999998
Q gi|254780486|r 10 EERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTL---LREKILSSLDSKIP--IGSGGSRLLCGNYNQHLELEEEA 84 (381)
Q Consensus 10 ~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~---v~~a~~~a~~~~~g--~~~~~sr~~~G~~~~~~~lE~~l 84 (381)
-+.|.+-.+++.+.--++|++-= -|+..+|. +.+-+-+.+- +.- +...+-=-+.-...+..+.|+..
T Consensus 4 ~~aL~~y~~~~~~~fh~PGHk~G-------~~~~~~~~~~~~~~~~ge~~~-~~D~~te~~~lD~L~~p~g~I~eAq~~a 75 (417)
T pfam01276 4 YKALFKYVRRGKYTFHCPGHQGG-------TGFRKHPAGRLFYDFFGENLF-RADLCIADVELGDLLDHSGPIKEAQKYA 75 (417)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCC-------CCCCCCHHHHHHHHHHHHHHH-HHHHCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 99999998189952407977999-------777866126899998756778-7650223357778778763999999999
Q ss_pred HHHCCCCCEEEECCC-CHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEE-CC-C-------------CHHH
Q ss_conf 401288851674166-024565566631689710045420267752666408764030-56-8-------------8147
Q gi|254780486|r 85 ADFFGFEKMLYFGSG-YAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAI-PH-N-------------NINS 148 (381)
Q Consensus 85 A~~~g~e~al~~~sG-~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f-~H-n-------------D~~~ 148 (381)
|+++|.+.+.+.-.| +.+|++++.++++++|.|+.|+++|-|++.|+.++++.-+.. +- | +.+.
T Consensus 76 A~~fga~~t~flvnGsT~g~~a~i~a~~~~Gd~Vlv~RN~HkSv~~al~l~g~~Pvyl~p~~~~~gi~~~i~~~~~~~e~ 155 (417)
T pfam01276 76 ARVFGADKSYFVVNGTSGANKTVGMAVCTPGDTVLIDRNCHKSIHHALMMSGATPVYLEPTRNAYGIIGGIPLHEFQEET 155 (417)
T ss_pred HHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCHHHCCHHH
T ss_conf 99839993699846830999999997438999899716418999999998698589953642434661588825459999
Q ss_pred HHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHC------CC
Q ss_conf 899764310002478607971462157661346899999863136089861311222347776401100001------34
Q gi|254780486|r 149 FAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEE------RN 222 (381)
Q Consensus 149 Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~------~~ 222 (381)
+++.++++..... .+.+|+|-.-| +|.+.++++|.++|+++|..|+|||||+- +-....-....... .+
T Consensus 156 ~~~~l~~~p~~k~-~~~v~lt~PtY--~G~~~di~~i~~~~h~~~~~llvDEAhGa--h~~F~plp~~a~~~gad~~~~~ 230 (417)
T pfam01276 156 IKEALAEVPPAKG-PRLAVITNGTY--DGTIYNAKEIVDTLGHLSDYILFDSAWVG--YEQFIPIYADASPMGGDNVNDP 230 (417)
T ss_pred HHHHHHHCCCCCC-CEEEEEECCCC--CEEEECHHHHHHHHHHCCCEEEEECCCCC--CCCCCCCCHHHHHCCCCCCCCC
T ss_conf 9999985876568-50899989998--70652899999998633987999788752--0246878334665678866677
Q ss_pred CCCCCCCCCCCCCC--EEEEEECC-CCCCCCCC-CCCCCEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf 65210013465653--02675245-10010000-1211000013577502578988789886
Q gi|254780486|r 223 NVIVMHSCSKALGS--SGALVGSN-KIIYDYLI-NYAKPFIYTTSPSPILAVVACEALKLIK 280 (381)
Q Consensus 223 ~~iv~~TlsKa~g~--~GG~i~~~-~~ii~~l~-~~~~~~ifst~l~P~~~aaa~aal~~l~ 280 (381)
.++++.|.-|.+++ +++++--. ...++.-+ +.+-....|||++.+.++..-.+-++++
T Consensus 231 ~~~vvqS~HKtL~altQ~s~Lh~~~~~~~~~~~~~~~l~~~qTTSPsY~lmASLD~ar~~m~ 292 (417)
T pfam01276 231 GIIVTQSVHKLLAAFSQASQIHKKDSHIVNHKRFNEAFMMHTSTSPFYPIVASLDVAAAMME 292 (417)
T ss_pred CEEEEEEHHHCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf 22798611113543043432121678778999999999977388748999999999999975
No 209
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.84 E-value=3e-18 Score=133.91 Aligned_cols=304 Identities=14% Similarity=0.147 Sum_probs=191.4
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHH-CCCCCCCCHHHHCC
Q ss_conf 89999999999863786887224436885899999999840128885167416602456556663-16897100454202
Q gi|254780486|r 46 TLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTL-PQATDLIVYDKLVH 124 (381)
Q Consensus 46 p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l-~~~~d~ii~D~~~H 124 (381)
.+-++++.+.+...|- ..| +.-+++|+++|+++|...|+.++||+.|...++.++ .+++|.|+.-...-
T Consensus 10 ~~e~~~v~~~l~s~~~--------~~G--~~v~~fE~~~~~~~g~k~~v~~~sgT~AL~lal~al~~~~gdeVivp~~tf 79 (380)
T TIGR03588 10 QDDIDAVVEVLKSDFL--------TQG--PTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALGVGPGDEVWTTPITF 79 (380)
T ss_pred HHHHHHHHHHHHCCCC--------CCC--HHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCC
T ss_conf 9999999999847986--------689--769999999999978594999758899999999984999989999678530
Q ss_pred HHHHHHHHHCCCCCEEEC------CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEE
Q ss_conf 677526664087640305------68814789976431000247860797146215766134689999986313608986
Q gi|254780486|r 125 ASIREGINSGKAQAIAIP------HNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVV 198 (381)
Q Consensus 125 aSi~~g~~ls~a~~~~f~------HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~Liv 198 (381)
.+....+...|++.+... .-|++++|+.+...+. ++.+.+|+|. +-|-.+++++|.++|++||..||-
T Consensus 80 ~at~~ai~~~Ga~pvf~Dvd~~t~~id~~~l~~~it~~~~--~ktkaIi~vh----~~G~~~d~~~i~~ia~~~~i~lIE 153 (380)
T TIGR03588 80 VATANCALYCGAKVDFVDIDPDTGNIDEDALEKKLAAAKG--KLPKAIVPVD----FAGKSVDMQAIAALAKKHGLKIIE 153 (380)
T ss_pred HHHHHHHHHCCCEEEEEECCHHHCCCCHHHHHHHHHHCCC--CCCEEEEEEC----CCCEECCHHHHHHHHHHCCCEEEE
T ss_conf 8867999987996899844100014898887777764367--7725999948----985434899999999986988999
Q ss_pred CCCCCCCCCCCCCCEEEEEHHC--CCCCCCCCCCC----CCCCC-EEEEEEC-CCCCCCC---CCCCCCC----------
Q ss_conf 1311222347776401100001--34652100134----65653-0267524-5100100---0012110----------
Q gi|254780486|r 199 DEAHATGVCGPLGKGLTHIIEE--RNNVIVMHSCS----KALGS-SGALVGS-NKIIYDY---LINYAKP---------- 257 (381)
Q Consensus 199 DEah~~Gv~G~~G~G~~~~~~~--~~~~iv~~Tls----Ka~g~-~GG~i~~-~~~ii~~---l~~~~~~---------- 257 (381)
|=||++|..- .|+- .|. ..++ ++|| |-+.+ -||+|.. ++++.+. +|+++..
T Consensus 154 DaA~a~Ga~~-~gk~----~Gs~~~gd~---~~fSF~~~K~ittGeGG~i~tnd~~l~~~~r~lr~~G~~~~~~~~~~~~ 225 (380)
T TIGR03588 154 DASHALGAEY-GGKP----VGNCRYADA---TVFSFHPVKIITTAEGGAVTTNDEELAERMRLLRSHGITKDPLLFEKQD 225 (380)
T ss_pred ECCCHHCCCC-CCCC----CCCCCCCCE---EEEECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCHHCCCC
T ss_conf 8800115775-7876----566443524---6773355555777885399969999999999999769677731001467
Q ss_pred ---E-------ECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HHHHHHCC-CCC-------CCCCCEEEEEEC
Q ss_conf ---0-------0013577502578988789886271022478999999-99876417-978-------998972899958
Q gi|254780486|r 258 ---F-------IYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINI-TDKIANKK-IGF-------SSQSHIQSIVIG 318 (381)
Q Consensus 258 ---~-------ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~-~~~~~~~~-~g~-------~~~s~I~~v~~g 318 (381)
+ -|.--|+...++.+++.|+.+.+.- ++.+++.++ .+.+.... +.. ....+..+|.+.
T Consensus 226 ~~~~~y~~~~~G~N~rmseiqAAig~~qL~~ld~~~---~~R~~ia~~Y~~~L~~~~~~~~~~~~~~~~~~~~~y~i~~~ 302 (380)
T TIGR03588 226 EGPWYYEQQELGFNYRMTDIQAALGLSQLKKLDRFV---AKRREIAARYDRLLKDLPYFTPLTIPLGSKSAWHLYPILLD 302 (380)
T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEEEC
T ss_conf 887403663476665431241487688888899999---99999999999964789983567469998315689999982
Q ss_pred CH--HHHHHHHHHHHHCCEEEEEECCCCC--C-------C----C-----CCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 97--9999999999977918986228888--8-------8----8-----7039996287899999999999999998
Q gi|254780486|r 319 DN--KSCLNIAKNLQKKGFDIRAIRPPTV--P-------I----N-----TARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 319 d~--~~a~~~~~~L~~~Gi~v~~i~~PtV--p-------~----~-----~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
.. ..-.++.+.|.++||-++...+|.- | . + ...|-+-++...|++|+++.++++++++
T Consensus 303 ~~~~~~r~~l~~~L~~~gI~t~~~y~Plh~~p~~~~~~~~~~~p~ae~~~~~~l~LP~~~~Lt~~di~~I~~~Ik~vL 380 (380)
T TIGR03588 303 QEFGCTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALTLEQQQRVVETLRKVL 380 (380)
T ss_pred CCCCCCHHHHHHHHHHCCCCEEEECCCHHCCHHHHHCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 667314999999999779985672304422998882788799879999984979897999989999999999999869
No 210
>pfam01212 Beta_elim_lyase Beta-eliminating lyase.
Probab=99.83 E-value=1.1e-19 Score=142.80 Aligned_cols=222 Identities=22% Similarity=0.243 Sum_probs=150.4
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHC
Q ss_conf 98899999999998637868872244368858999999998401288851674166024565566631689710045420
Q gi|254780486|r 44 SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLV 123 (381)
Q Consensus 44 ~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~ 123 (381)
-+|++.++..++- .|- -.+|..+...+||+++|+++|+|++++++||++||+.++.++++|++.|+++..+
T Consensus 10 ~t~~m~~a~~~a~---~Gd------d~Yg~D~t~~~le~~~a~l~G~eaalfv~sGT~AN~ial~~~~~~g~~vi~~~~s 80 (288)
T pfam01212 10 PTPAMREAMAAAM---VGD------EVYGGDPTVNRLEDRVAELFGKEAALFVPSGTMANQLALMAHCRRGDEVICGEPA 80 (288)
T ss_pred CCHHHHHHHHHCC---CCC------CCCCCCHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEECCC
T ss_conf 9999999998233---577------3226798999999999998699829986886799999999838899889983576
Q ss_pred CHHHHHH---HHHCCCCCEEEC-----CCCHHHHHHHHHHHHHCCCCCCCEEEECCC-CCCCCCHH---HHHHHHHHHHH
Q ss_conf 2677526---664087640305-----688147899764310002478607971462-15766134---68999998631
Q gi|254780486|r 124 HASIREG---INSGKAQAIAIP-----HNNINSFAENINKWRKSGGKGFPWIVVESI-YSMDGDKA---PLDDLVKIAND 191 (381)
Q Consensus 124 HaSi~~g---~~ls~a~~~~f~-----HnD~~~Le~~l~~~~~~~~~~~~~vv~egv-~Sm~G~~a---pL~~i~~l~~~ 191 (381)
|....+. ..+++++.++.+ .-|++++++.++.....+.....+|.+|-- -+..|.+. .|++|.++|++
T Consensus 81 Hi~~~E~ga~~~~~G~~~~~l~~~~~G~~~~~~l~~~i~~~~~~h~~~~~~v~le~t~n~~gG~~~~~~el~~i~~~a~~ 160 (288)
T pfam01212 81 HIYFDETGGHAELGGAQPVPLPGAEAGKLDLEDLEAAIRPVGDIHFPPTGLISLENTHNSAGGQVVSLEELREIRAIARE 160 (288)
T ss_pred CCEEECCCHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCEECCHHHHHHHHHHHHH
T ss_conf 76545677799982982584478778982999999987644985467654799995544889665578999999999998
Q ss_pred CCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCC-EEEEEECCCCCCCCCCCCCCCEECCCCCC--CCH
Q ss_conf 360898613112223477764011000013465210013465653-02675245100100001211000013577--502
Q gi|254780486|r 192 YDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGS-SGALVGSNKIIYDYLINYAKPFIYTTSPS--PIL 268 (381)
Q Consensus 192 y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~-~GG~i~~~~~ii~~l~~~~~~~ifst~l~--P~~ 268 (381)
||..|++|-|-=+-..-..|....+.. ...+.+.-.|+|.+|+ .|+.+++++++++..+..-+- +...+. -..
T Consensus 161 ~gl~lHmDGARl~nA~~a~~~~~~e~~--~~~D~v~~~~sK~lga~~Gavl~g~~~~i~~a~~~rk~--lGg~mrq~g~~ 236 (288)
T pfam01212 161 HGIPLHLDGARLANAAVALGVIVKEIT--SYADSVSMSLSKGLGAPVGSVLAGSDDFIAYAIRQRKY--LGGGMRQAGVL 236 (288)
T ss_pred CCCEEEEHHHHHHHHHHHCCCCHHHHH--CCCCEEEEEEECCCCCCEEEEEEECHHHHHHHHHHHHH--HHCCHHHHHHH
T ss_conf 099376308789888876099988985--46888999843578861003898289999999999999--72642566799
Q ss_pred HHHHHHHHHH
Q ss_conf 5789887898
Q gi|254780486|r 269 AVVACEALKL 278 (381)
Q Consensus 269 ~aaa~aal~~ 278 (381)
+++.+.+|+.
T Consensus 237 aaa~~~aL~~ 246 (288)
T pfam01212 237 AAAGLRALEE 246 (288)
T ss_pred HHHHHHHHHH
T ss_conf 9999999980
No 211
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminase; InterPro: IPR004637 This is a very small family, with two known examples at the time of model creation. This enzyme is a pyridoxal phosphate-containing class III aminotransferase and is quite similar to 4-aminobutyrate aminotransferase (2.6.1.19 from EC). Diaminobutyrate-2-oxoglutarate transaminase (2.6.1.76 from EC) is a homotetramer which catalyses the conversion of L-2,4-diaminobutyrate and 2-oxoglutarate to L-glutamate and L-aspartic 4-semialdehyde during 1,3-diaminopropane biosynthesis.; GO: 0008483 transaminase activity, 0009058 biosynthetic process.
Probab=99.83 E-value=7.8e-18 Score=131.30 Aligned_cols=343 Identities=22% Similarity=0.262 Sum_probs=219.4
Q ss_pred HHHCCCEEEECCCCEEEEC-CCCCCCCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC----C
Q ss_conf 9975983999289768980-344656677-988999999999986378688722443688589999999984012----8
Q gi|254780486|r 16 IKSKGRHRQLLRRQDIWDF-TSHDYLALS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF----G 89 (381)
Q Consensus 16 ~~~~g~~~~~~~~~~~l~f-~s~dYLGl~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~----g 89 (381)
-+++|-+.+.++|++|+|| ++-=-|.|. +||.+.++..+.++....+++ +-=++++-.+.-+++-.|+ .
T Consensus 26 ~~A~G~~~~D~~G~~Y~DflaGAG~L~~GHN~~~~~Q~~~~~l~~~~~~H~-----LDl~T~~K~~F~~~l~~~~~~~r~ 100 (445)
T TIGR00709 26 AKAQGCWVTDVEGKEYLDFLAGAGTLALGHNHPNLKQKIKDVLQSGLPLHT-----LDLTTPLKDAFIEALLNILPKPRK 100 (445)
T ss_pred HHCCCCEEEECCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCEEE-----HHCCHHHHHHHHHHHHHHHCCCCC
T ss_conf 401742798427750212221000210467888999999999860785543-----002200027899999997068877
Q ss_pred CCCEEEE--CCCCHHHHHHHH---HHCCCCCCCCHHHHCCH----HH--------HHH--HHHCCCCCEEECCCC-----
Q ss_conf 8851674--166024565566---63168971004542026----77--------526--664087640305688-----
Q gi|254780486|r 90 FEKMLYF--GSGYAANMAILS---TLPQATDLIVYDKLVHA----SI--------REG--INSGKAQAIAIPHNN----- 145 (381)
Q Consensus 90 ~e~al~~--~sG~~An~~~i~---~l~~~~d~ii~D~~~Ha----Si--------~~g--~~ls~a~~~~f~HnD----- 145 (381)
.+-++.| |||..|+.++|. .++++..+|=.----|. +| .+| ..+++.+..+|+|.=
T Consensus 101 ~~Y~l~F~GP~GA~a~EaA~KLA~~~TGR~~visF~~GfHGMT~GaLa~TGN~~~~Na~~~~~~~~~~~PY~~~~~~P~G 180 (445)
T TIGR00709 101 EDYKLQFPGPSGADAVEAAIKLAKTYTGRTNVISFSGGFHGMTIGALALTGNLFAKNAVEMLLPGVQFLPYPHEYRCPLG 180 (445)
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCHHHCCCCC
T ss_conf 63178718889853578999974311787004763388510122136652242000124556777622788423247666
Q ss_pred ----------HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCH-HH---HHHHHHHHHHCCEEEEECCCCCCCCCCCCC
Q ss_conf ----------1478997643100024786079714621576613-46---899999863136089861311222347776
Q gi|254780486|r 146 ----------INSFAENINKWRKSGGKGFPWIVVESIYSMDGDK-AP---LDDLVKIANDYDGFIVVDEAHATGVCGPLG 211 (381)
Q Consensus 146 ----------~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~-ap---L~~i~~l~~~y~~~LivDEah~~Gv~G~~G 211 (381)
.+=+|.-|+.. .+.-....-|++|.|-.=-|-. || |+.|.++|++++..||+||+|+ | ++|+|
T Consensus 181 ~GGeaG~~~~~~Y~ENF~~~~-~SG~~KPAA~I~E~iQGEGG~~~A~~~wL~~i~~v~~~~~I~lIlD~VQA-G-~~R~G 257 (445)
T TIGR00709 181 LGGEAGSNAVIEYFENFIEDV-ESGVDKPAAVILEAIQGEGGVVAAPVEWLQKIREVTRKHDIKLILDEVQA-G-FGRSG 257 (445)
T ss_pred CCCHHHHHHHHHHHHHHHHCC-CCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCC-C-CCCCC
T ss_conf 770344678999987754136-67765760468863307885102247999999998742784799822345-7-01255
Q ss_pred CEE-EEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCC-CCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHH
Q ss_conf 401-100001346521001346565302---67524510010000-1211000013577502578988789886271022
Q gi|254780486|r 212 KGL-THIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLI-NYAKPFIYTTSPSPILAVVACEALKLIKRKPALH 286 (381)
Q Consensus 212 ~G~-~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~-~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~ 286 (381)
+-. .|+.|+.|++|+ ||||.|+.| +.++-.+++=.|.- .|..+| -.+-.+.+....+|++++++ .+.
T Consensus 258 ~~FaFE~AGI~PD~v~---~SKavGGng~PLAv~~i~~~fD~~~Pa~H~GTF----RGN~lA~~TG~~~L~~~kd~-~L~ 329 (445)
T TIGR00709 258 KMFAFEHAGIEPDVVV---LSKAVGGNGLPLAVLLIKKEFDAWQPAGHTGTF----RGNQLAMVTGLEALNIIKDD-NLA 329 (445)
T ss_pred CCEEECCCCCCCCEEE---EECCCCCCCHHHHHHHHHHHCCCCCCCCCCCCC----CCHHHHHHHHHHHHHHHHHH-HHH
T ss_conf 5110024789867689---830338885068887763430456889866554----30157888889999988876-676
Q ss_pred HHHHHHHHHH----HHHHHCCC---CCC-CCCCEEEEE--------------ECCHHHHHHHHHHHHHCCEEEEEECCCC
Q ss_conf 4789999999----98764179---789-989728999--------------5897999999999997791898622888
Q gi|254780486|r 287 KSLLQLINIT----DKIANKKI---GFS-SQSHIQSIV--------------IGDNKSCLNIAKNLQKKGFDIRAIRPPT 344 (381)
Q Consensus 287 ~~l~~~~~~~----~~~~~~~~---g~~-~~s~I~~v~--------------~gd~~~a~~~~~~L~~~Gi~v~~i~~Pt 344 (381)
+..++..++. +.+..+.. ++. +..-.+-|. -.|...|..++.++++++++.--.
T Consensus 330 ~N~QE~~E~~t~~L~~~~K~~P~~~~VRkGRGlM~Gi~~~~E~~~~D~~G~~P~D~~LA~~I~~~CF~~~LllE~~---- 405 (445)
T TIGR00709 330 QNAQERGERITSFLDDLIKEYPCIGNVRKGRGLMIGIEIVDERKSKDAIGAYPADSELAAAIQGACFENGLLLEKG---- 405 (445)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEC----
T ss_conf 5554446789999999987378547620566335413210257742224788621489999986322057334306----
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 88887039996287899999999999999998873
Q gi|254780486|r 345 VPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 345 Vp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
.++..-+|+..+...+++++++.+..|++.+.|-
T Consensus 406 -G~~~~V~~ll~p~~I~~~~~~~~~~~~~~av~e~ 439 (445)
T TIGR00709 406 -GREGEVVRLLCPITIDQEELEEVISRLKQAVEEA 439 (445)
T ss_pred -CCCCCEEEEECCEEECHHHHHHHHHHHHHHHHHH
T ss_conf -8997368970660324566899999999999999
No 212
>PRK09265 aminotransferase AlaT; Validated
Probab=99.83 E-value=8.9e-18 Score=130.97 Aligned_cols=343 Identities=11% Similarity=0.059 Sum_probs=185.2
Q ss_pred HHHHHHHHHHCCCEEEECCCCEEEECCCCCC--CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH
Q ss_conf 9999999997598399928976898034465--66779889999999999863786887224436885899999999840
Q gi|254780486|r 9 YEERLQKIKSKGRHRQLLRRQDIWDFTSHDY--LALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAAD 86 (381)
Q Consensus 9 ~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dY--LGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~ 86 (381)
.-++.++++++ |++++||+--+= .+|..-+.+++++++++.. +.+.+.+ .|..++-+++-+.+.+
T Consensus 21 v~~kA~~l~~~--------G~~vi~l~iG~P~~~df~tP~~i~~a~~~a~~~--~~~Yt~~---~G~~eLReaIA~~~~~ 87 (404)
T PRK09265 21 VLKEAKRLEEE--------GHKILKLNIGNPAPFGFEAPDEILRDVIRNLPT--AQGYSDS---KGLFSARKAIMQYYQQ 87 (404)
T ss_pred HHHHHHHHHHC--------CCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHC--CCCCCCC---CCCHHHHHHHHHHHHH
T ss_conf 99999999976--------997358779799988999989999999987444--8998988---8889999999999997
Q ss_pred HCCC----CCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC---CC----CHHHHHHHHHH
Q ss_conf 1288----8516741660245655666316897100454202677526664087640305---68----81478997643
Q gi|254780486|r 87 FFGF----EKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP---HN----NINSFAENINK 155 (381)
Q Consensus 87 ~~g~----e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~---Hn----D~~~Le~~l~~ 155 (381)
..|. |+.++.+.+-.|-..++.++++|||.|++-.=...+-...+++.+++.+.++ .| |+++|++.+.
T Consensus 88 ~~~~~~~p~~I~vT~Ga~~al~~~~~all~pGDeVlvp~P~Yp~Y~~~~~l~g~~~v~~~~~~~~~f~~d~~~l~~~i~- 166 (404)
T PRK09265 88 KGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTAAVSLSGGKPVHYLCDEEAGWFPDLDDIRSKIT- 166 (404)
T ss_pred HCCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHCCCEEEEEECCCCCCCCCCHHHHHHHCC-
T ss_conf 5699988899787588899999999996499898999468873068999976988999852632377889999997657-
Q ss_pred HHHCCCCCCCEEEECCCCCCCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCC--CCCCCCC
Q ss_conf 1000247860797146215766134---6899999863136089861311222347776401100001346--5210013
Q gi|254780486|r 156 WRKSGGKGFPWIVVESIYSMDGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNN--VIVMHSC 230 (381)
Q Consensus 156 ~~~~~~~~~~~vv~egv~Sm~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~--~iv~~Tl 230 (381)
++.+.+|+.-.-.. .|.+. .|++|+++|++||++++.||+|+--++. |.-........++ +|.+.+|
T Consensus 167 -----~~tk~iil~nP~NP-TG~v~~~~~l~~l~~~a~~~~i~visDEiY~~l~~d--~~~~~s~~~l~~~~~~I~~~s~ 238 (404)
T PRK09265 167 -----PRTKAIVIINPNNP-TGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYD--GAEHISIASLAPDLLCVTFNGL 238 (404)
T ss_pred -----CCCEEEEECCCCCC-CCCCCCHHHHHHHHHHHHHCEEEEEECCHHHHHCCC--CCCCCCHHHCCCCCEEEEECCC
T ss_conf -----45559998689795-120025046889999763155899850114552369--9988787881986059997367
Q ss_pred CCCCCCEE---EEEE--CCCCCCC-CCC---CCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHH---HHHHHHHHHHHH
Q ss_conf 46565302---6752--4510010-000---1211000013577502578988789886271022---478999999998
Q gi|254780486|r 231 SKALGSSG---ALVG--SNKIIYD-YLI---NYAKPFIYTTSPSPILAVVACEALKLIKRKPALH---KSLLQLINITDK 298 (381)
Q Consensus 231 sKa~g~~G---G~i~--~~~~ii~-~l~---~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~---~~l~~~~~~~~~ 298 (381)
||+|+..| ||++ +++..+. ++. ..+... ..+..|.. .++.++|.-.+...++. .++.+...+..+
T Consensus 239 SK~~~m~G~RiG~~v~~~p~~~~~~~i~~~~~l~~~~--~c~~~~~Q-~a~~~al~~~~~~~~~~~~~~rl~~~Rd~~~~ 315 (404)
T PRK09265 239 SKAYRVAGFRVGWMVLSGPKKHAKGYIEGLDMLASMR--LCANVPAQ-HAIQTALGGYQSINELILPGGRLYEQRDRAWE 315 (404)
T ss_pred CCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCC--CCCCCHHH-HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 7455677552799995291999999999999885401--56882899-99999973831299999999999999999999
Q ss_pred HHHCCCCCC---CCCCE-EEEEEC----CHHHHHHHHHHHH-HCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHH
Q ss_conf 764179789---98972-899958----9799999999999-77918986228888888703999628789999999999
Q gi|254780486|r 299 IANKKIGFS---SQSHI-QSIVIG----DNKSCLNIAKNLQ-KKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLF 369 (381)
Q Consensus 299 ~~~~~~g~~---~~s~I-~~v~~g----d~~~a~~~~~~L~-~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~ 369 (381)
......|++ .+... +.+.+. ......+++.+|+ +.||.+.|...= -+.+...+||+.. .++++++..+
T Consensus 316 ~L~~i~g~~~~~P~Gafy~f~~l~~~~~~~~d~~~f~~~Ll~e~gV~v~PG~~F-g~~~~~~vRlsf~--~~~e~l~eal 392 (404)
T PRK09265 316 LLNAIPGVSCVKPKGALYAFPKLDPKVYPIHDDEKFVLDLLLQEKVLLVQGTGF-NWPEPDHFRIVTL--PRVDDLEDAI 392 (404)
T ss_pred HHHHCCCCEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEECCCCC-CCCCCCEEEEEEC--CCHHHHHHHH
T ss_conf 997389957568983899830877331799999999999998699999778502-8899998999979--9999999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999998873
Q gi|254780486|r 370 DILPQIISEG 379 (381)
Q Consensus 370 ~~l~~v~~E~ 379 (381)
+.|.+.+++.
T Consensus 393 ~Rl~~~l~~~ 402 (404)
T PRK09265 393 GRIGRFLSGY 402 (404)
T ss_pred HHHHHHHHHH
T ss_conf 9999999984
No 213
>PRK05839 hypothetical protein; Provisional
Probab=99.83 E-value=3.5e-17 Score=127.22 Aligned_cols=327 Identities=16% Similarity=0.181 Sum_probs=175.7
Q ss_pred CCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC---CCEEEECCCCHHH
Q ss_conf 8976898034465667798899999999998637868872244368858999999998401288---8516741660245
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF---EKMLYFGSGYAAN 103 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~---e~al~~~sG~~An 103 (381)
.+++++||+--| -.|..-|.|++|+.++.. . ..+.+.+ .|..++.+++-+.+.+-+|. ++-++..+|..-.
T Consensus 22 ~~~dvi~L~iG~-pdf~~P~~i~~A~~~~~~-~-~~~Y~~~---~G~peLR~Aia~~~~~~~g~~v~~~~I~vt~Ga~~a 95 (376)
T PRK05839 22 KKGELLDLTIGE-PQFETPKFIQDALKNNAH-L-LNKYPKS---AGEEELREAQRGFFKRRFNIELKENELIPTFGTREV 95 (376)
T ss_pred CCCCEEECCCCC-CCCCCCHHHHHHHHHHHH-C-CCCCCCC---CCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHHH
T ss_conf 899848796889-999989999999998644-4-8977998---782999999999999986899980249981788999
Q ss_pred H-HHHHHH--CCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC---CCHH-HHHHHHHHHHHCCCCCCCEEEEC-CCCCC
Q ss_conf 6-556663--168971004542026775266640876403056---8814-78997643100024786079714-62157
Q gi|254780486|r 104 M-AILSTL--PQATDLIVYDKLVHASIREGINSGKAQAIAIPH---NNIN-SFAENINKWRKSGGKGFPWIVVE-SIYSM 175 (381)
Q Consensus 104 ~-~~i~~l--~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H---nD~~-~Le~~l~~~~~~~~~~~~~vv~e-gv~Sm 175 (381)
+ .+...+ .+++|.|+.-.=...+-...+++++++.+.++- |+.. ++++... .+.+ +|++- .=..
T Consensus 96 l~~~~~~~l~~~~~~~i~~p~P~y~~y~~~~~~~g~~~v~v~l~~e~~~~~~l~~~~~------~~tk-~iilnsP~NP- 167 (376)
T PRK05839 96 LFNFPQFVLFDKQNPTIAYPNPFYQIYEGAAIASRAKSLYMNLTKENDFTPSLNEKEL------QEVD-LVILNSPNNP- 167 (376)
T ss_pred HHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHH------HCCC-EEEECCCCCC-
T ss_conf 9999999845799988997898763258999861686324246402588864118765------0589-9998899899-
Q ss_pred CCCH---HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEH-----HCCCCCCCCCCCCCCCCCEE---EEEECC
Q ss_conf 6613---468999998631360898613112223477764011000-----01346521001346565302---675245
Q gi|254780486|r 176 DGDK---APLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHII-----EERNNVIVMHSCSKALGSSG---ALVGSN 244 (381)
Q Consensus 176 ~G~~---apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~-----~~~~~~iv~~TlsKa~g~~G---G~i~~~ 244 (381)
.|.+ ..|++|+++|++||++++.||+|+--+.+..-....+.. ...+++|+++||||+|+..| ||++++
T Consensus 168 TG~v~s~eel~~i~~la~~~~~~iisDEiY~~l~~~~~~~s~~~~~~~~~~~~~~~vi~i~s~SK~~~~~G~RiG~i~~~ 247 (376)
T PRK05839 168 TGRTLSLEELISWVKLALKYDFILINDECYSEIYENTPPPSLLEASILAGNESFKNVLVINSISKRSSAPGLRSGFIAGD 247 (376)
T ss_pred CCCCCCHHHHHHHHHHHCCCEEEEEEECCHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEEECCHHHCCCCCCCEEEEECC
T ss_conf 88236399999998751473699998068288637999876888656514553253799923203201465406999789
Q ss_pred CCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCC--CCCCEEEEEECCHHH
Q ss_conf 100100001211000013577502578988789886271022478999999998764179789--989728999589799
Q gi|254780486|r 245 KIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIANKKIGFS--SQSHIQSIVIGDNKS 322 (381)
Q Consensus 245 ~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~~g~~--~~s~I~~v~~gd~~~ 322 (381)
+++++.++.. ..++..++..|...+ +.+++. ++ +..+..++..+.+.++....++.. ..+--+.+.+.|
T Consensus 248 ~~~i~~~~~~-~~~~~~~~~~~~q~a-a~~a~~---~~-~~~~~~r~~~~~~~~~~~~~l~~~~P~g~fy~~~~~~d--- 318 (376)
T PRK05839 248 SSILKKYKAY-RTYLGCASPLPLQKA-AAVAWL---DD-EHAEFFRNIYAKNLKLAREILGITIPPYTFYVWLPVQN--- 318 (376)
T ss_pred HHHHHHHHHH-HHHCCCCCCHHHHHH-HHHHHC---CC-HHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEEECCC---
T ss_conf 9999999986-564367851999999-999972---96-68999999999999999875398889803799866899---
Q ss_pred HHHHHHHHHH-CCEEEEEECCCCC-CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9999999997-7918986228888-888703999628789999999999999999887
Q gi|254780486|r 323 CLNIAKNLQK-KGFDIRAIRPPTV-PINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 323 a~~~~~~L~~-~Gi~v~~i~~PtV-p~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
..++++.|++ .||.+.|...=-. ..|...+||+.. .++|.+++.++.|++.++.
T Consensus 319 ~~~f~~~Ll~~~gV~v~PG~~FG~~~~g~~~vRls~~--~~~e~L~eal~Rl~~f~e~ 374 (376)
T PRK05839 319 DENFTKKLYQNEGIKVLPGSYLGRNGIGKDYVRLALV--YDTPKLKKALERIKTYREN 374 (376)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEEEE--CCHHHHHHHHHHHHHHHHH
T ss_conf 8999999998099999774001799998996999970--8899999999999999986
No 214
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.82 E-value=6e-18 Score=132.04 Aligned_cols=325 Identities=16% Similarity=0.192 Sum_probs=197.7
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH----HHHHCCCCC----EEEEC-CCCHHHH
Q ss_conf 03446566779889999999999863786887224436885899999999----840128885----16741-6602456
Q gi|254780486|r 34 FTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEE----AADFFGFEK----MLYFG-SGYAANM 104 (381)
Q Consensus 34 f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~----lA~~~g~e~----al~~~-sG~~An~ 104 (381)
-+|.|| ..|.|.++.---+..+|.-|..|.|...|+ ....++|.. ..++|+.|. |-+-| ||..||+
T Consensus 37 IASEN~----~S~~v~~a~gS~ltnkYaEGyPg~Ryy~G~-e~iD~iE~la~~ra~~lF~~~~~~wgaNVqp~SGs~AN~ 111 (450)
T PTZ00094 37 IASENL----TSRAVLECLGSVFTNKYAEGYPGNRYYGGT-EVVDKIENLCQKRALAAFNLDPEEWGVNVQPYSGSPANF 111 (450)
T ss_pred ECCCCC----CCHHHHHHHCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHH
T ss_conf 742675----799999985774237455889984454664-259999999999999983898543661057686699999
Q ss_pred HHHHHHCCCCCCCCHHHHCCHH-HHHH-------HHHCCC--CCEEECC-----CCHHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 5566631689710045420267-7526-------664087--6403056-----88147899764310002478607971
Q gi|254780486|r 105 AILSTLPQATDLIVYDKLVHAS-IREG-------INSGKA--QAIAIPH-----NNINSFAENINKWRKSGGKGFPWIVV 169 (381)
Q Consensus 105 ~~i~~l~~~~d~ii~D~~~HaS-i~~g-------~~ls~a--~~~~f~H-----nD~~~Le~~l~~~~~~~~~~~~~vv~ 169 (381)
+++.+|.+|+|.|+.=.+.|.- +-.| +..++- +.+.|.- -|++.++++.++.+. +.+|+-
T Consensus 112 av~~all~pGD~im~l~l~~GGHltHG~~~~~~~v~~sg~~~~~~~Y~vd~~~~IDyd~~~~~a~~~kP-----klIi~G 186 (450)
T PTZ00094 112 AVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIFFESLPYQVNEEGLIDYDKLEKLAKAFRP-----KLIIAG 186 (450)
T ss_pred HHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHCC-----CEEEEC
T ss_conf 999997079997998435668865543346777754013455567732464897489999999986199-----879988
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCC-CCEEEEEECCCC--
Q ss_conf 46215766134689999986313608986131122234777640110000134652100134656-530267524510--
Q gi|254780486|r 170 ESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKAL-GSSGALVGSNKI-- 246 (381)
Q Consensus 170 egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~-g~~GG~i~~~~~-- 246 (381)
-+.|+- ..|.++++++|++.|++|++|=||-.|.+ ..| + ...+...-+++++|.-|.| |-.||.|.+++.
T Consensus 187 ~Say~r---~id~k~~reIad~vGA~l~~D~AHiaGLI-Agg--~-~psP~~~ADvVT~TTHKTLrGPrGGiIl~~k~~~ 259 (450)
T PTZ00094 187 ASAYPR---DIDYKRFREICDSVGAYLMADIAHTSGLV-AAG--V-LPSPFPYADVVTTTTHKSLRGPRSGMIFFRKKIR 259 (450)
T ss_pred CCCCCC---CCCHHHHHHHHHHCCCEEEEECHHHHHHH-CCC--C-CCCCCCCCEEEECCCCCCCCCCCCEEEEECCCCH
T ss_conf 825425---43879999999973998996314444432-045--5-7984345504752222347789842898446640
Q ss_pred --CCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCC---HHHHHHHHHHHH-HHHHHCCCCC---CCCCCEEEEEE
Q ss_conf --01000012110000135775025789887898862710---224789999999-9876417978---99897289995
Q gi|254780486|r 247 --IYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPA---LHKSLLQLINIT-DKIANKKIGF---SSQSHIQSIVI 317 (381)
Q Consensus 247 --ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~---~~~~l~~~~~~~-~~~~~~~~g~---~~~s~I~~v~~ 317 (381)
+.+.+...--|-+.+++..- ..|+..-++.-.. .|+ -.++..+|++.+ ..+...++.+ .+++|.+-|-+
T Consensus 260 ~e~~~kId~aVFPg~qggph~h-~IAa~Ava~~Ea~-~~efk~Ya~qVv~NAkaLa~~L~~~G~~vvsggTdnHlvlvDl 337 (450)
T PTZ00094 260 PDIESKINQAVFPGLQGGPHFH-QIAAIAVQLKEVC-SPEWKEYAKQVVDNAKALAAELEKRGFDLVTGGTDNHLILWNL 337 (450)
T ss_pred HHHHHHHCCCCCCCCCCCHHHH-HHHHHHHHHHHHH-CHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEC
T ss_conf 8999985451288544677787-9999999999975-7679999999999999999999978996950899762799977
Q ss_pred CCHH-HHHHHHHHHHHCCEEEEEECCC--CCCCCCCEEEEEC----CCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8979-9999999999779189862288--8888870399962----878999999999999999988
Q gi|254780486|r 318 GDNK-SCLNIAKNLQKKGFDIRAIRPP--TVPINTARLRISI----TLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 318 gd~~-~a~~~~~~L~~~Gi~v~~i~~P--tVp~~~~rlRi~v----~a~~t~edi~~~~~~l~~v~~ 377 (381)
.... ...++.+.|.+.||.++--.-| .-|...+.|||-. +....++|+.+..+.|.++++
T Consensus 338 ~~~g~~G~~ae~~Le~~gI~~NkN~iP~D~~~~~~SGiRiGT~a~TtrGm~e~em~~ia~lI~~~i~ 404 (450)
T PTZ00094 338 RPFGITGSKVEKLLDAVNISVNKNTIPGDKSALAPSGIRLGTPALTSRGAVEEDFEFVADFLDRAVK 404 (450)
T ss_pred CCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCEEECCCHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 7789999999999987493874787999999999870331677888389988999999999999999
No 215
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.82 E-value=1.8e-17 Score=129.12 Aligned_cols=352 Identities=14% Similarity=0.072 Sum_probs=180.7
Q ss_pred HHHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCC---CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 789999999999759839992897689803446566---77988999999999986378688722443688589999999
Q gi|254780486|r 6 MSFYEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLA---LSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEE 82 (381)
Q Consensus 6 ~~~~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLG---l~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~ 82 (381)
+.-+.++..+++++ -+|++++||+ +| +..-+.|++++.++++. ...+. +.+ -++...-+.+|=+
T Consensus 16 f~~i~~~~~~~~~~------~~~~dvI~L~----iGePdf~~P~~i~~a~~~ai~~-~~~~~-~~~-gY~~~~G~~~LRe 82 (402)
T TIGR03542 16 FSEINRRVNEFRKK------NPSASVIRLG----IGDTTQPLPASVIEAFHEAVDE-LASEE-TYR-GYGPEQGLPALRE 82 (402)
T ss_pred CHHHHHHHHHHHHH------CCCCCEEECC----CCCCCCCCCHHHHHHHHHHHHH-CCCCC-CCC-CCCCCCCHHHHHH
T ss_conf 08999999999985------8899855898----9998999899999999999971-22467-867-7797406499999
Q ss_pred HHHH-HCCC---CCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC---CCCHHH---HHH-
Q ss_conf 9840-1288---8516741660245655666316897100454202677526664087640305---688147---899-
Q gi|254780486|r 83 EAAD-FFGF---EKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP---HNNINS---FAE- 151 (381)
Q Consensus 83 ~lA~-~~g~---e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~---HnD~~~---Le~- 151 (381)
++|+ +++. ++=++..+|....+..+.++.++||.|++-.=.-.+-...++++++...... +.++.. +++
T Consensus 83 aia~~~~~~~~~~d~I~vt~Ga~~~l~~l~a~l~pGD~Vii~~P~y~~Y~~~~~~~g~~~~~~~~~~~~~~~~~~~~~e~ 162 (402)
T TIGR03542 83 AIAENDYRGRISPEEIFISDGAKCDIGRLQSIFGSDNTVAVQDPVYPAYVDTAVMTGRAGFADDTGQYRGIVYLPCTKEN 162 (402)
T ss_pred HHHHHHHCCCCCHHHEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCEEECCCCHHH
T ss_conf 99999756899889967777829999999998399998998388881579999985995301356655672567676243
Q ss_pred HHHHHHHCCCCCCCEEEECCCCCCCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCC-CCEEEEEHHCCCCCCCC
Q ss_conf 76431000247860797146215766134---689999986313608986131122234777-64011000013465210
Q gi|254780486|r 152 NINKWRKSGGKGFPWIVVESIYSMDGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGPL-GKGLTHIIEERNNVIVM 227 (381)
Q Consensus 152 ~l~~~~~~~~~~~~~vv~egv~Sm~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~~-G~G~~~~~~~~~~~iv~ 227 (381)
.........++.+.+|+.-.=.. .|.+. .|++|+++|++||+++|.||+|+.-++.+. -..+....+..+.+|.+
T Consensus 163 ~~~~~~~~~~ktk~iiln~P~NP-TG~v~s~eel~~i~~la~~~~i~iIsDEiY~~~~~~~~~~~s~~~~~~~~~~~I~i 241 (402)
T TIGR03542 163 GFIPELPEERKIDIIYLCSPNNP-TGTVLTKEQLKELVDYANAHGSLILFDAAYSAFISDPSIPHSIYEIEGAKECAIEI 241 (402)
T ss_pred CCCCCCCCCCCCEEEEECCCCCC-CCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHCCCCCCCCCEECCCCCCEEEEC
T ss_conf 85722234557359998999798-87568999999999998750707960222887616898762011136652136731
Q ss_pred CCCCCCCCCEE---EEEECCCCCCC----CC-CC--CCCCEECCCCCCCCHHHHHHHHHHH--HHHCCCHHHHHHHHHHH
Q ss_conf 01346565302---67524510010----00-01--2110000135775025789887898--86271022478999999
Q gi|254780486|r 228 HSCSKALGSSG---ALVGSNKIIYD----YL-IN--YAKPFIYTTSPSPILAVVACEALKL--IKRKPALHKSLLQLINI 295 (381)
Q Consensus 228 ~TlsKa~g~~G---G~i~~~~~ii~----~l-~~--~~~~~ifst~l~P~~~aaa~aal~~--l~~~~~~~~~l~~~~~~ 295 (381)
+||||+|+..| ||++++++++. .+ +. .-....++++..|.. .++.+++.- .....+..+..+++...
T Consensus 242 ~S~SK~~~m~G~RiG~~i~p~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~q-~a~~aal~~~~~~~~~~~~~~~~~~~~~ 320 (402)
T TIGR03542 242 NSFSKSLGFTGVRLGWTVVPKELTYADGHSVIQDWERRLCTTFNGASYPVQ-RAAEAAYAGEGLQPILEAISYYMENARI 320 (402)
T ss_pred CCCCCCCCCCCCCHHHEECCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHH-HHHHHHHCCCCHHHHHHHHHHHHHHHHH
T ss_conf 676240278340540211258775422799999999998762577559999-9999997378859999999999999999
Q ss_pred HHHHHHCCCCCCCC----CCEEEEEECCHHHHHHHHHHHH-HCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 99876417978998----9728999589799999999999-779189862288888887039996287899999999999
Q gi|254780486|r 296 TDKIANKKIGFSSQ----SHIQSIVIGDNKSCLNIAKNLQ-KKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFD 370 (381)
Q Consensus 296 ~~~~~~~~~g~~~~----s~I~~v~~gd~~~a~~~~~~L~-~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~ 370 (381)
..+. ....|+... +....+-+.......++++.|+ +.||.+.|...= -+.|...+||+.. .++|+|++.++
T Consensus 321 l~~~-l~~~g~~~~~~~ga~yl~~~~~~~~~~~~~~~~ll~e~~V~vvPG~~F-G~~g~g~vRls~a--~~~e~l~ea~~ 396 (402)
T TIGR03542 321 LREA-LEAAGFKVYGGENAPYLWVKTPEGISSWDFFDFLLYQYHIVGTPGSGF-GSSGEGFVRFSAF--GKRENIVAACE 396 (402)
T ss_pred HHHH-HHHCCCEEECCCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCHHH-CCCCCCEEEEEEE--CCHHHHHHHHH
T ss_conf 9998-875695760799734897878999898999999998599999764476-8999896999972--99999999999
Q ss_pred HHHHHH
Q ss_conf 999998
Q gi|254780486|r 371 ILPQII 376 (381)
Q Consensus 371 ~l~~v~ 376 (381)
.|++++
T Consensus 397 Rl~~~L 402 (402)
T TIGR03542 397 RIKHAL 402 (402)
T ss_pred HHHHHC
T ss_conf 999759
No 216
>PRK06234 methionine gamma-lyase; Provisional
Probab=99.82 E-value=2.9e-18 Score=134.01 Aligned_cols=294 Identities=17% Similarity=0.181 Sum_probs=190.9
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHH---HH-HHHCCCCCEE
Q ss_conf 7224436885899999999840128885167416602456556663168971004542026775---26-6640876403
Q gi|254780486|r 65 GGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIR---EG-INSGKAQAIA 140 (381)
Q Consensus 65 ~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~---~g-~~ls~a~~~~ 140 (381)
.=||. .++....||++||++-|.++|++|+||..|-.+++.+++++||+|++-.......+ .. ..--+.++..
T Consensus 57 ~YsR~---~nPT~~~lE~~la~LEgg~~a~~~sSGmaAi~~~l~~~l~~Gdhiv~~~~~YGgT~~l~~~~l~~~Gi~~~~ 133 (399)
T PRK06234 57 IYTRL---GNPTSTEVENKLALLEGGEAAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTF 133 (399)
T ss_pred EECCC---CCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf 24299---886799999999998399759984588999999999971899989975887204899999886516857886
Q ss_pred ECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHC-CEEEEECCCCCCCCCCCCCCEEEEEHH
Q ss_conf 0568814789976431000247860797146215766134689999986313-608986131122234777640110000
Q gi|254780486|r 141 IPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDY-DGFIVVDEAHATGVCGPLGKGLTHIIE 219 (381)
Q Consensus 141 f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y-~~~LivDEah~~Gv~G~~G~G~~~~~~ 219 (381)
+.-+|++++++.++ +++.+|.+|+.-+-...+.|+++++++|+++ |++++||..-+..++ +..+
T Consensus 134 vd~~d~~~~~~ai~-------~~Tklv~~Etp~NP~l~v~Di~~ia~iA~~~~g~~~vvDNT~atP~~-------~~Pl- 198 (399)
T PRK06234 134 VDTSNLEEVRNALK-------ANTKVVYLETPANPNLKVTDIKAISNIAHENKECLVFVDNTFCTPYI-------QRPL- 198 (399)
T ss_pred ECCCCHHHHHHHCC-------CCCEEEEEECCCCCCCEECCCHHHHHHHHHCCCCEEEEECCCCCCCC-------CCCC-
T ss_conf 26889699996478-------88449999789998866148589999876557976872589776144-------6740-
Q ss_pred CCCCCCCCCCCCCCCCC----EEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHH
Q ss_conf 13465210013465653----0267524510010000121100001357750257898878988627102-247899999
Q gi|254780486|r 220 ERNNVIVMHSCSKALGS----SGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLIN 294 (381)
Q Consensus 220 ~~~~~iv~~TlsKa~g~----~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~ 294 (381)
....+|++.|.+|-+++ .||.|++++++++.+|...--.+....++|..+...+..|+.|.-+-++ .+...++++
T Consensus 199 ~~GaDivihS~TKyi~GHsD~l~G~v~~~~~~~~~~r~~~~~~~~G~~l~p~~a~l~lrGL~TL~lR~~r~~~nA~~lA~ 278 (399)
T PRK06234 199 QLGADVVVHSATKYLNGHGDVIAGFVVGKEEFINQVKLFGVKDMTGSVIGPFEAFLIIRGMKTLQIRMEKHCKNAMEVAE 278 (399)
T ss_pred CCCCCEEEEECCCEECCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 04897899825631058877154699655999999999998870188688788899862467499999999999999999
Q ss_pred HHHHHHHC-C---CCC-------------CCCCCEEEEEE-CCHHHHHHHHHHHH--HCCEEE----EEECCCCCC----
Q ss_conf 99987641-7---978-------------99897289995-89799999999999--779189----862288888----
Q gi|254780486|r 295 ITDKIANK-K---IGF-------------SSQSHIQSIVI-GDNKSCLNIAKNLQ--KKGFDI----RAIRPPTVP---- 346 (381)
Q Consensus 295 ~~~~~~~~-~---~g~-------------~~~s~I~~v~~-gd~~~a~~~~~~L~--~~Gi~v----~~i~~PtVp---- 346 (381)
+++..-.. . .++ ...+.++.+.+ ++.+.+..+.+.|. ..+.-. +-+..|+.-
T Consensus 279 ~L~~hp~V~~V~yPgL~shp~h~lak~~~~g~gg~~sf~l~~~~~~~~~f~~~l~lf~~a~SlGg~eSLi~~pa~~th~~ 358 (399)
T PRK06234 279 FLEKHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFELKGGVEEGKVLMNNVKLATLAVSLGDAETLIQHPASMTHSP 358 (399)
T ss_pred HHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCEECCCCCCCCHHHCCCCCCCCCC
T ss_conf 99848984779898988994689999767899963688856979999999981884643046776633005852125767
Q ss_pred ----------CCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf ----------887039996287899999999999999998
Q gi|254780486|r 347 ----------INTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 347 ----------~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
.....||+++...+.++-|+.+-.+|+.+.
T Consensus 359 ~~~e~r~~~gi~~~liRlSVGlEd~eDLi~DL~qAL~~i~ 398 (399)
T PRK06234 359 YTAEERAEAGISDGLVRLSVGLEDVEDIIADLKQALDLIV 398 (399)
T ss_pred CCHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHHH
T ss_conf 9999999669891969999400999999999999999864
No 217
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.82 E-value=3.9e-17 Score=126.96 Aligned_cols=358 Identities=14% Similarity=0.125 Sum_probs=207.1
Q ss_pred HHHHHHHHHHHHCCCEEEE------------------CCC------CEEEECCCCCCCCCC--CCHHHHHHHHHHHHHHC
Q ss_conf 8999999999975983999------------------289------768980344656677--98899999999998637
Q gi|254780486|r 7 SFYEERLQKIKSKGRHRQL------------------LRR------QDIWDFTSHDYLALS--SSTLLREKILSSLDSKI 60 (381)
Q Consensus 7 ~~~~~~l~~~~~~g~~~~~------------------~~~------~~~l~f~s~dYLGl~--~~p~v~~a~~~a~~~~~ 60 (381)
+-..+..++++.+|..... .+. ...++|+... .... ....+.+...+.+ +.+
T Consensus 43 ~Tv~~ay~~L~~~G~i~~~~gs~~~~~~~~~~~~~~~~~~~~~~~~~~~i~f~~g~-p~~~~fp~~~~~~~~~~~~-~~~ 120 (459)
T COG1167 43 STVSRAYEELEARGYIESRPGSAPPSGRPVRLELLKPSDPELLEDDPSVIDFAGGL-PDPSLFPLEALRRALARVL-RNY 120 (459)
T ss_pred HHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCHHCCHHHHHHHHHHHH-HHC
T ss_conf 89999999999767855125666653444565521123422245787554768899-8810188899999999998-505
Q ss_pred CCCC-CCCCCCCCCCHHHHHHHHHHHHHCC---CCCEEEECCCCHH-HHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCC
Q ss_conf 8688-7224436885899999999840128---8851674166024-565566631689710045420267752666408
Q gi|254780486|r 61 PIGS-GGSRLLCGNYNQHLELEEEAADFFG---FEKMLYFGSGYAA-NMAILSTLPQATDLIVYDKLVHASIREGINSGK 135 (381)
Q Consensus 61 g~~~-~~sr~~~G~~~~~~~lE~~lA~~~g---~e~al~~~sG~~A-n~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~ 135 (381)
+... -..-...|..++-+++-+.+..-.| .++-++..||... -..+...+++|||.|+++.-.+-.+....+..+
T Consensus 121 ~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g 200 (459)
T COG1167 121 GASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQALEALG 200 (459)
T ss_pred CHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCC
T ss_conf 61233226876888999999999999974998883038980649999999999847999999989998289999999869
Q ss_pred CCCEEECC----CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC-CCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCC
Q ss_conf 76403056----88147899764310002478607971462157-66134---689999986313608986131122234
Q gi|254780486|r 136 AQAIAIPH----NNINSFAENINKWRKSGGKGFPWIVVESIYSM-DGDKA---PLDDLVKIANDYDGFIVVDEAHATGVC 207 (381)
Q Consensus 136 a~~~~f~H----nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm-~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~ 207 (381)
.+++..+- -|++.||+.+++++ .+.++++ .-|.. .|..- .=++|+++|++||+++|=||.++.-.+
T Consensus 201 ~~~~~vp~d~~G~~~e~le~~~~~~~-----~k~~y~~-P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~ 274 (459)
T COG1167 201 ARVIPVPVDEDGIDPEALEEALAQWK-----PKAVYVT-PTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRY 274 (459)
T ss_pred CCEEEECCCCCCCCHHHHHHHHHCCC-----CCEEEEC-CCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHCC
T ss_conf 94786067888989799999985069-----7289978-89638898745999999999999975987998677433215
Q ss_pred CCCCCEEE--EEHHCCCCCCCCCCCCCCCC--CEEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-
Q ss_conf 77764011--00001346521001346565--30267524510010000121100001357750257898878988627-
Q gi|254780486|r 208 GPLGKGLT--HIIEERNNVIVMHSCSKALG--SSGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK- 282 (381)
Q Consensus 208 G~~G~G~~--~~~~~~~~~iv~~TlsKa~g--~~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~- 282 (381)
. +.-.. ..+...+++|.++||||.+. ..-||+++++++++.+....... .-.++.....+++.. +.+.
T Consensus 275 ~--~~p~~~l~~ld~~~rViy~gSFSK~l~PglRlG~vv~p~~~~~~~~~~k~~~---~~~~s~~~Q~~la~~--l~~G~ 347 (459)
T COG1167 275 D--GPPPPPLKALDAPGRVIYLGSFSKTLAPGLRLGYVVAPPELIEKLLRLKQAA---DLGPSSLSQAALAAF--LLSGH 347 (459)
T ss_pred C--CCCCCCHHHHCCCCCEEEECCCHHHHCCCCCEEEEECCHHHHHHHHHHHHHH---CCCCCHHHHHHHHHH--HHCCH
T ss_conf 8--8998345762899978999132665146755499972999999999998762---569989999999999--97285
Q ss_pred -C----CHHHHHHHHHHHHHHHHHCCCC----CCCC--CCEEEEEECCHHHHHHHHHHHHHCCEEEEEE--CCCCCCCCC
Q ss_conf -1----0224789999999987641797----8998--9728999589799999999999779189862--288888887
Q gi|254780486|r 283 -P----ALHKSLLQLINITDKIANKKIG----FSSQ--SHIQSIVIGDNKSCLNIAKNLQKKGFDIRAI--RPPTVPINT 349 (381)
Q Consensus 283 -~----~~~~~l~~~~~~~~~~~~~~~g----~~~~--s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i--~~PtVp~~~ 349 (381)
. .+|+...+......+......+ +..+ .-.+-+.+++...+.++.+++.++|+.+.+. .|..-+...
T Consensus 348 ~~~hl~~lR~~y~~rr~~l~~~L~~~~~~~~~~~~p~gG~flwl~l~~~~~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~ 427 (459)
T COG1167 348 YDRHLRRLRREYARRRDALLEALAEYLPELATWTRPEGGLFLWLELPEGIDARELLAAALEKGVVVTPLGSAFSADGDPR 427 (459)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEECCCCCCHHHHHHHHHHCCCEEECCCCCCCCCCCCC
T ss_conf 99999999999999999999999974787637726995589999869988889999999986997945886635789889
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 0399962878999999999999999988738
Q gi|254780486|r 350 ARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 350 ~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
..+|++.+. .+++++++.+..|.+++.+..
T Consensus 428 ~~~Rl~~s~-~~~e~i~~gi~~l~~~~~~~~ 457 (459)
T COG1167 428 NGLRLSFSS-PSEEEIEEGIKRLAALLREAA 457 (459)
T ss_pred CEEEEECCC-CCHHHHHHHHHHHHHHHHHHH
T ss_conf 828998898-999999999999999999762
No 218
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.82 E-value=6.3e-18 Score=131.88 Aligned_cols=328 Identities=18% Similarity=0.229 Sum_probs=204.9
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH----HHHHCCCCCEEEEC-CCCHHHHHHHH
Q ss_conf 03446566779889999999999863786887224436885899999999----84012888516741-66024565566
Q gi|254780486|r 34 FTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEE----AADFFGFEKMLYFG-SGYAANMAILS 108 (381)
Q Consensus 34 f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~----lA~~~g~e~al~~~-sG~~An~~~i~ 108 (381)
.+|-|| .+|+|.++.---+..+|.-|..|-|...|+ +...++|.. ..++||.+.|-+-| ||..||++++.
T Consensus 57 IASEN~----~S~aV~ea~gS~ltnKYAEGyPG~RYY~Gc-e~vD~iE~lai~rak~LF~a~~aNVQP~SGs~AN~avy~ 131 (493)
T PRK13580 57 IASENY----SSLAVQLAMGNLLTDKYAEGTPGHRFYAGC-QNVDAIEWEAAEHARELFGAEHAYVQPHSGADANLVAFW 131 (493)
T ss_pred EECCCC----CCHHHHHHHCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
T ss_conf 734887----889999985673101245889986323775-779999999999999983898503277876077899999
Q ss_pred HHC-----CCC--------------------------CCCCHHHHCCHH-HHHHHHH--CCC--CCEEECC------CCH
Q ss_conf 631-----689--------------------------710045420267-7526664--087--6403056------881
Q gi|254780486|r 109 TLP-----QAT--------------------------DLIVYDKLVHAS-IREGINS--GKA--QAIAIPH------NNI 146 (381)
Q Consensus 109 ~l~-----~~~--------------------------d~ii~D~~~HaS-i~~g~~l--s~a--~~~~f~H------nD~ 146 (381)
++. +|+ |.|+.=.+.|.- +-.|.+. |+- +.+.|.- -|+
T Consensus 132 All~~~v~~Pgl~~~g~~~~~~l~~~~~~~~~~~~g~d~imgl~L~~GGHLTHG~~~n~sg~~~~~~~Y~vd~et~~IDy 211 (493)
T PRK13580 132 AILAHKVEAPALSKLGAKTVNDLTEEEWEELRAELGNQRLLGMSLDSGGHLTHGFRPNISGKMFRQRSYGVDPDTGLLDY 211 (493)
T ss_pred HHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCCCCH
T ss_conf 98600024864223343332323301222220246788687058887866336996563422688787536633484089
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEE-EEHHCCCCCC
Q ss_conf 478997643100024786079714621576613468999998631360898613112223477764011-0000134652
Q gi|254780486|r 147 NSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLT-HIIEERNNVI 225 (381)
Q Consensus 147 ~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~-~~~~~~~~~i 225 (381)
+.++++.++.+. +.+|+--+.||- ..|.++++++|++.|++|++|=||-.|.+ ..|. +. +..++..-++
T Consensus 212 D~~~~~A~~~kP-----KlII~G~SaYpr---~idf~~freIAdeVGA~LmaDiAHiaGLV-A~g~-~~~h~sP~~~ADv 281 (493)
T PRK13580 212 DEIAALAREFKP-----LVLVAGYSAYPR---RVNFAKLREIADEVGAVLMVDMAHFAGLV-AGKV-FTGDEDPVPHADI 281 (493)
T ss_pred HHHHHHHHHCCC-----CEEEECCCCCCC---CCCHHHHHHHHHHCCCEEEEEHHHHHHHH-HCCC-CCCCCCCCCCCCE
T ss_conf 999999997499-----889977624656---44879999999971978981056676776-4254-5689995133515
Q ss_pred CCCCCCCCC-CCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCC---HHHHHHHHHHHH-HHHH
Q ss_conf 100134656-53026752451001000012110000135775025789887898862710---224789999999-9876
Q gi|254780486|r 226 VMHSCSKAL-GSSGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPA---LHKSLLQLINIT-DKIA 300 (381)
Q Consensus 226 v~~TlsKa~-g~~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~---~~~~l~~~~~~~-~~~~ 300 (381)
++.|--|.| |-.||.|++++++.+.+...- |.+.++++.-..++-+. ++.-. ..|+ ..++..+|++.+ +.+.
T Consensus 282 VTtTTHKTLrGPRGGiIl~~~e~~~~Id~av-Pg~QGGP~~h~IAakAv-af~EA-~~peFk~Y~~qVv~NAkaLA~~L~ 358 (493)
T PRK13580 282 VTTTTHKTLRGPRGGLVLAKKEYAEAVDKGC-PLVLGGPLPHVMAAKAV-ALAEA-RTPDFKKYAHRVVDNARALAEGFL 358 (493)
T ss_pred EECCCCCCCCCCCCCEEEECHHHHHHHCCCC-CCCCCCHHHHHHHHHHH-HHHHH-HCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7512344567888506884647787651038-75468727769999999-99997-277789999999999999999999
Q ss_pred HCCCCC---CCCCCEEEEEECCHH-HHHHHHHHHHHCCEEEEEECCC---CCCCCCCEEEEEC----CCCCCHHHHHHHH
Q ss_conf 417978---998972899958979-9999999999779189862288---8888870399962----8789999999999
Q gi|254780486|r 301 NKKIGF---SSQSHIQSIVIGDNK-SCLNIAKNLQKKGFDIRAIRPP---TVPINTARLRISI----TLNVDEPTIVKLF 369 (381)
Q Consensus 301 ~~~~g~---~~~s~I~~v~~gd~~-~a~~~~~~L~~~Gi~v~~i~~P---tVp~~~~rlRi~v----~a~~t~edi~~~~ 369 (381)
..++.+ .+++|.+-|-+..-. .-....+.|.+.||.++--.-| --|...+.||+-. +....++|+.+..
T Consensus 359 ~~G~~vvsGGTdnHlvLvDl~~~g~tG~~ae~~Le~~gI~vNKN~iP~D~~~p~~~SGIRiGtpa~TtRGm~e~em~~ia 438 (493)
T PRK13580 359 KRGARLVTGGTDNHLLLIDVTSFGLTGRQAEDALLDVGIVTNRNSIPSDPNGAWYTSGIRLGTPALTTLGMGSDEMDEVA 438 (493)
T ss_pred HCCCEEECCCCCCCEEEEECCCCCCCHHHHHHHHHHCCEEEECCCCCCCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHH
T ss_conf 88994852888877588856778998899999998779387168898999889888641116666761899989999999
Q ss_pred HHHHHHHHHH
Q ss_conf 9999998873
Q gi|254780486|r 370 DILPQIISEG 379 (381)
Q Consensus 370 ~~l~~v~~E~ 379 (381)
+.|.++++..
T Consensus 439 ~~I~~~l~~~ 448 (493)
T PRK13580 439 ELIVKVLRNT 448 (493)
T ss_pred HHHHHHHHCC
T ss_conf 9999999552
No 219
>pfam00464 SHMT Serine hydroxymethyltransferase.
Probab=99.82 E-value=5.4e-18 Score=132.32 Aligned_cols=318 Identities=18% Similarity=0.233 Sum_probs=194.9
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH----HHHHHCCCCCEEEEC-CCCHHHHHHHH
Q ss_conf 0344656677988999999999986378688722443688589999999----984012888516741-66024565566
Q gi|254780486|r 34 FTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEE----EAADFFGFEKMLYFG-SGYAANMAILS 108 (381)
Q Consensus 34 f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~----~lA~~~g~e~al~~~-sG~~An~~~i~ 108 (381)
-+|-|| .+|.+.++.---+..+|.-|..|.|...|+ +...++|. +..++|+.+.|-+-| ||..||++++.
T Consensus 26 IASEN~----~S~~v~~a~gS~ltnkYaEG~pg~Ryy~G~-e~iD~iE~la~~rak~lF~a~~anVqp~SGs~An~av~~ 100 (380)
T pfam00464 26 IASENF----TSRAVMEALGSVLTNKYAEGYPGKRYYGGC-EYVDEVETLAQDRAKELFGLDGVNVQPLSGSQANLAVYT 100 (380)
T ss_pred ECCCCC----CCHHHHHHHCCCCCCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHH
T ss_conf 537775----799999985573126465879984334676-359999999999999983997635177876999999999
Q ss_pred HHCCCCCCCCHHHH------CCHHHHHHHHHCCC--CCEEECC------CCHHHHHHHHHHHHHCCCCCCCEEEECCCCC
Q ss_conf 63168971004542------02677526664087--6403056------8814789976431000247860797146215
Q gi|254780486|r 109 TLPQATDLIVYDKL------VHASIREGINSGKA--QAIAIPH------NNINSFAENINKWRKSGGKGFPWIVVESIYS 174 (381)
Q Consensus 109 ~l~~~~d~ii~D~~------~HaSi~~g~~ls~a--~~~~f~H------nD~~~Le~~l~~~~~~~~~~~~~vv~egv~S 174 (381)
+|.+|+|.|+.=.+ .|.+. ...++- +...|.- -|++.++++.++.+. +.+|+--+.|+
T Consensus 101 all~PGD~il~l~l~~GGHltHg~~---~~~~g~~~~~~~Y~~d~~~~~ID~d~l~~~a~~~kP-----klIi~G~Say~ 172 (380)
T pfam00464 101 ALLNPGDRIMGLDLPHGGHLTHGYP---VNFSGKFFESMPYGVDPDTGLIDYDQLEKNAKLFKP-----KLIVAGTSAYS 172 (380)
T ss_pred HHHCCCCEEEECCCCCCCCCCCCCC---CCEECCEEEEEECCCCCCCCCCCHHHHHHHHHHCCC-----CEEEECCCCCC
T ss_conf 9837999899536777754567986---562011467787434645486689999999997099-----88998740043
Q ss_pred CCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCC-CCEEEEEECCC---CCCCC
Q ss_conf 766134689999986313608986131122234777640110000134652100134656-53026752451---00100
Q gi|254780486|r 175 MDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKAL-GSSGALVGSNK---IIYDY 250 (381)
Q Consensus 175 m~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~-g~~GG~i~~~~---~ii~~ 250 (381)
- .-|.++++++|++.|++|++|=||-.|.+ ..| + ...+...-+++++|--|.| |-.||.|++++ ++.+.
T Consensus 173 r---~~d~~~~reIad~vgA~l~~D~aH~~GLI-A~g--~-~p~Pl~~ADvvt~tTHKTlrGPrGGiIl~~~~~~e~~~k 245 (380)
T pfam00464 173 R---LIDYARFREIADEVGAYLMVDMAHIAGLV-AAG--V-IPSPFPYAHVVTTTTHKTLRGPRGGMIFFREILYELEKK 245 (380)
T ss_pred C---CCCHHHHHHHHHHCCCEEEEEHHHHHHHH-HCC--C-CCCCCCCCEEEECCCCCCCCCCCCEEEEECCCHHHHHHH
T ss_conf 6---44889999999750988998637777777-424--3-799546665785354566789985179837837999999
Q ss_pred CCCCCCCEECCCCCCCCHHHHHHHHH-HHHHHC-CCHHHHHHHHHHHHHH-HHHCCCCC---CCCCCEEEEEECCH-HHH
Q ss_conf 00121100001357750257898878-988627-1022478999999998-76417978---99897289995897-999
Q gi|254780486|r 251 LINYAKPFIYTTSPSPILAVVACEAL-KLIKRK-PALHKSLLQLINITDK-IANKKIGF---SSQSHIQSIVIGDN-KSC 323 (381)
Q Consensus 251 l~~~~~~~ifst~l~P~~~aaa~aal-~~l~~~-~~~~~~l~~~~~~~~~-~~~~~~g~---~~~s~I~~v~~gd~-~~a 323 (381)
+...--|.+.+++.. ...|+..-++ +.+..+ .+..++..+|++.+.+ +...++.+ -+++|.+-|-+.+. -..
T Consensus 246 Id~avFPg~qggp~~-h~iAa~Aval~Ea~~~~f~~Ya~qVv~NAk~La~~L~~~G~~vv~ggTd~H~vlvdl~~~g~~G 324 (380)
T pfam00464 246 INSAVFPGLQGGPLN-HVIAAKAVALKQALTPEFKVYQQQVLKNAKALAEALKERGYKLVSGGTDNHLVLVDLRPKGLDG 324 (380)
T ss_pred HCCCCCCCCCCCHHH-HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCCEEEEECCCCCCCH
T ss_conf 714048876677006-5799999999998485299999999999999999999788835779998768999776669999
Q ss_pred HHHHHHHHHCCEEEEEECCC---CCCCCCCEEEEEC----CCCCCHHHHHHHHHHH
Q ss_conf 99999999779189862288---8888870399962----8789999999999999
Q gi|254780486|r 324 LNIAKNLQKKGFDIRAIRPP---TVPINTARLRISI----TLNVDEPTIVKLFDIL 372 (381)
Q Consensus 324 ~~~~~~L~~~Gi~v~~i~~P---tVp~~~~rlRi~v----~a~~t~edi~~~~~~l 372 (381)
.++.+.|.+.||.++--.-| --|...+.|||-. +....++|++++.+.|
T Consensus 325 ~~a~~~Le~~gI~~Nkn~iP~d~~~~~~~sGiRiGt~~~T~rG~~e~em~~ia~~I 380 (380)
T pfam00464 325 KRAEKALERANITANKNTIPGDPKSPFVTSGLRLGTPALTSRGFGEADFEEVAGYI 380 (380)
T ss_pred HHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHHHHC
T ss_conf 99999999769287888598999999888842657778983899889999999659
No 220
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.81 E-value=1.7e-17 Score=129.20 Aligned_cols=304 Identities=16% Similarity=0.197 Sum_probs=185.6
Q ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHC-CCCCCCCHHHHCC
Q ss_conf 899999999998637868872244368858999999998401288851674166024565566631-6897100454202
Q gi|254780486|r 46 TLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLP-QATDLIVYDKLVH 124 (381)
Q Consensus 46 p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~-~~~d~ii~D~~~H 124 (381)
.+..+++.+.+...|-+ .| +.-.++|+++|+|+|.+.|+.++||+.|..-++.+|. +++|.||.-...-
T Consensus 15 ~~e~~~v~~vl~sg~i~--------~G--~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~Tf 84 (374)
T COG0399 15 EEELAAVQEVLKSGWLT--------GG--PFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTF 84 (374)
T ss_pred HHHHHHHHHHHHCCCCC--------CC--HHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCH
T ss_conf 57999999999619741--------68--678999999999849973999668489999999964879999799368753
Q ss_pred HHHHHHHHHCCCCCEEEC-----C-CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEE
Q ss_conf 677526664087640305-----6-8814789976431000247860797146215766134689999986313608986
Q gi|254780486|r 125 ASIREGINSGKAQAIAIP-----H-NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVV 198 (381)
Q Consensus 125 aSi~~g~~ls~a~~~~f~-----H-nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~Liv 198 (381)
.+-...+...|++.+... . -|.+.+|+.+... .+.+|.++ .-|..+++++|.+||++||..+|-
T Consensus 85 vATan~i~~~Ga~PVFvDid~~T~nid~~~ie~aIt~~------tKAIipVh----l~G~~~dm~~i~~la~~~~l~vIE 154 (374)
T COG0399 85 VATANAVLLVGAKPVFVDIDPDTLNIDPDLIEAAITPR------TKAIIPVH----LAGQPCDMDAIMALAKRHGLPVIE 154 (374)
T ss_pred HHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHCCCC------CEEEEEEH----HCCCCCCHHHHHHHHHHCCCEEEE
T ss_conf 98899999769967999647641477999999871557------74999851----216877989999999873984998
Q ss_pred CCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCC--CCCCCC-EEEEEECC-CCCCC---CCCCCCCCE------E-----C
Q ss_conf 13112223477764011000013465210013--465653-02675245-10010---000121100------0-----0
Q gi|254780486|r 199 DEAHATGVCGPLGKGLTHIIEERNNVIVMHSC--SKALGS-SGALVGSN-KIIYD---YLINYAKPF------I-----Y 260 (381)
Q Consensus 199 DEah~~Gv~G~~G~G~~~~~~~~~~~iv~~Tl--sKa~g~-~GG~i~~~-~~ii~---~l~~~~~~~------i-----f 260 (381)
|-||++|..- .|+ ..|-..+.-. -|| .|-+++ -||.|.++ +++.+ .+++++... . |
T Consensus 155 DaAqa~Ga~y-~gk----~vGt~Gd~~~-fSF~~~K~ittgEGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~ 228 (374)
T COG0399 155 DAAQAHGATY-KGK----KVGSFGDIGA-FSFHATKNLTTGEGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGY 228 (374)
T ss_pred ECCHHCCCEE-CCC----CCCCCCCEEE-EEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEECCC
T ss_conf 7603206723-584----2556664689-986587765566750798388999999999998376778665643521330
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH-HHHHHHH---CCCCCC-----CCCCEEEEEECCH-HHHHHHHHHH
Q ss_conf 1357750257898878988627102247899999-9998764---179789-----9897289995897-9999999999
Q gi|254780486|r 261 TTSPSPILAVVACEALKLIKRKPALHKSLLQLIN-ITDKIAN---KKIGFS-----SQSHIQSIVIGDN-KSCLNIAKNL 330 (381)
Q Consensus 261 st~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~-~~~~~~~---~~~g~~-----~~s~I~~v~~gd~-~~a~~~~~~L 330 (381)
..-|+-..+|-.+.-|+.+++. .++.+++.+ |...+.. ..+... ...+..++.+.+. ..-..+.+.|
T Consensus 229 N~rm~~iqAAigl~QL~~l~~~---~~~R~~~a~~Y~~~l~~~~~~~~p~~~~~~~~~~~~~~i~~~~~~~~R~~l~~~L 305 (374)
T COG0399 229 NYRLTEIQAAIGLAQLERLDEI---NERRREIAQIYAEALKGLPGITLPPEPDGAVHAWHLYTILVDEEGISRDALMESL 305 (374)
T ss_pred CCCHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEEECCCCCCHHHHHHHH
T ss_conf 0387799999999999888999---9999999999999861078743357898761230366898267777899999999
Q ss_pred HHCCEEEEEECCC-----------CC-----CC----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9779189862288-----------88-----88----8703999628789999999999999999887
Q gi|254780486|r 331 QKKGFDIRAIRPP-----------TV-----PI----NTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 331 ~~~Gi~v~~i~~P-----------tV-----p~----~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
.++||-+..-.+| -. |. ....|++-++...|++|+++.++++.+++.+
T Consensus 306 ~~~gi~~~~~~~P~~~~~~~~~~~~~~~~~lp~ae~~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 306 KEAGVGAVVYFRPLHLQPAYRQLGYFPEGDLPNAEDLSERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred HHCCCCCEEEEECCCCCHHHHCCCCCCCCCCCHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 86787751663134432666504456667882288996174872589998999999999999998504
No 221
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.81 E-value=5.2e-17 Score=126.19 Aligned_cols=285 Identities=18% Similarity=0.190 Sum_probs=179.9
Q ss_pred CHHHHHHHHHHHHHCCCC--CEEEE-CCCCHHHHHHHHHHCCCCCCCCHHHHCCHH--HHHHHHHCCCCCEEEC-----C
Q ss_conf 589999999984012888--51674-166024565566631689710045420267--7526664087640305-----6
Q gi|254780486|r 74 YNQHLELEEEAADFFGFE--KMLYF-GSGYAANMAILSTLPQATDLIVYDKLVHAS--IREGINSGKAQAIAIP-----H 143 (381)
Q Consensus 74 ~~~~~~lE~~lA~~~g~e--~al~~-~sG~~An~~~i~~l~~~~d~ii~D~~~HaS--i~~g~~ls~a~~~~f~-----H 143 (381)
.+++.++++.|.+++|.+ .++++ .||+.|+.+++..+..++|.|+.=..-+.| ..+-++..+..+..++ .
T Consensus 31 ~~~~~~~~~~L~~~~~~~~~~~v~~~gsgt~a~ea~~~n~~~~~~kvlv~~~G~fg~r~~~~a~~~g~~~~~i~~~~~~~ 110 (356)
T cd06451 31 LALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDRWADMAERYGADVDVVEKPWGEA 110 (356)
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEEEEEECCCCHHHHHHHCCCCEEEEECCCCCC
T ss_conf 99999999999999589998489995770899999998526888814788530405416764411597239986899997
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCC--
Q ss_conf 881478997643100024786079714621576613468999998631360898613112223477764011000013--
Q gi|254780486|r 144 NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEER-- 221 (381)
Q Consensus 144 nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~-- 221 (381)
-|++++++.|++.. .+.-.++-.|. ..|.+.|+++|.++|++||++++||-++++|.. .+.+.
T Consensus 111 ~~~~~v~~~l~~~~---~~~v~~~h~et---stG~~~~l~~i~~~~~~~~~~~~vDavss~g~~---------~id~~~~ 175 (356)
T cd06451 111 VSPEEIAEALEQHD---IKAVTLTHNET---STGVLNPLEGIGALAKKHDALLIVDAVSSLGGE---------PFRMDEW 175 (356)
T ss_pred CCHHHHHHHHHCCC---CCEEEEECCCC---CCCCCCCHHHHHHHHHHCCEEEEEECCHHHCCC---------CCCCCCC
T ss_conf 89899998863389---65899966536---510147758899987415727997253110556---------5025666
Q ss_pred CCCCCCCCCCCCCCC-EE-EEEECCCCCCCCCCCC--CCCEE---------------CCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 465210013465653-02-6752451001000012--11000---------------01357750257898878988627
Q gi|254780486|r 222 NNVIVMHSCSKALGS-SG-ALVGSNKIIYDYLINY--AKPFI---------------YTTSPSPILAVVACEALKLIKRK 282 (381)
Q Consensus 222 ~~~iv~~TlsKa~g~-~G-G~i~~~~~ii~~l~~~--~~~~i---------------fst~l~P~~~aaa~aal~~l~~~ 282 (381)
+.++++++--|+|++ .| ||+..++...+.++.. .+++. +...+|-....+..++|+.+.++
T Consensus 176 giD~~~~ssqK~l~~ppGl~~~~vs~~a~~~~~~~~~~~~~y~dl~~~~~~~~~~~~~~~Tp~~~~i~al~~AL~~i~~~ 255 (356)
T cd06451 176 GVDVAYTGSQKALGAPPGLGPIAFSERALERIKKKTKPKGFYFDLLLLLKYWGEGYSYPHTPPVNLLYALREALDLILEE 255 (356)
T ss_pred CEEEEEECCCCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 60599976886445899668999889999998603899877779899998761489878898806889999999999860
Q ss_pred --CCHHHHHHHHHHHHHHHHHCCCCCC------CCCC-EEEEEECCHHHHHHHHHHHHH-CCEEEEEECCCCCCCCCCEE
Q ss_conf --1022478999999998764179789------9897-289995897999999999997-79189862288888887039
Q gi|254780486|r 283 --PALHKSLLQLINITDKIANKKIGFS------SQSH-IQSIVIGDNKSCLNIAKNLQK-KGFDIRAIRPPTVPINTARL 352 (381)
Q Consensus 283 --~~~~~~l~~~~~~~~~~~~~~~g~~------~~s~-I~~v~~gd~~~a~~~~~~L~~-~Gi~v~~i~~PtVp~~~~rl 352 (381)
+.+.++.+++.+++.+ ....+|+. ..|| +.++.+++.....++.++|++ +|+.+.+-.-+ .....+
T Consensus 256 G~~~~~~r~~~l~~~l~~-~l~~lGl~~~~~~~~~S~~vt~~~~p~g~~~~~~~~~l~~~~~i~i~~g~g~---~~~~~f 331 (356)
T cd06451 256 GLENRWARHRRLAKALRE-GLEALGLKLLAKPELRSPTVTAVLVPEGVDGDEVVRRLMKRYNIEIAGGLGP---TAGKVF 331 (356)
T ss_pred CHHHHHHHHHHHHHHHHH-HHHHCCCCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHHHCCEEEECCCCC---CCCCEE
T ss_conf 658999999999999999-9997599656893654982799979999999999999999789999788665---689589
Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9962878999999999999999988
Q gi|254780486|r 353 RISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 353 Ri~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
||...-.+|.+||++++++|+++++
T Consensus 332 RIg~mG~~~~~di~~~l~al~~~Lk 356 (356)
T cd06451 332 RIGHMGEATREDVLGVLSALEEALK 356 (356)
T ss_pred EECCCCCCCHHHHHHHHHHHHHHHC
T ss_conf 8618989999999999999999859
No 222
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.81 E-value=1.7e-16 Score=122.94 Aligned_cols=304 Identities=17% Similarity=0.160 Sum_probs=189.9
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHH-CCCCCCCCHHHHC
Q ss_conf 889999999999863786887224436885899999999840128885167416602456556663-1689710045420
Q gi|254780486|r 45 STLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTL-PQATDLIVYDKLV 123 (381)
Q Consensus 45 ~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l-~~~~d~ii~D~~~ 123 (381)
.++-++++.+.+...| ++|.-+..+++|+++|+++|...|+.++||+.|-..++.++ .++||.|+.-...
T Consensus 10 ~~~e~~~v~~~l~sg~---------~~~~G~~v~~fE~~~a~~~g~~~av~v~sgT~AL~lal~~l~i~~gdeVivp~~t 80 (375)
T PRK11706 10 VGTELDYIQEAMSSGK---------LSGDGGFTRRCQQWLEQRFGCAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYT 80 (375)
T ss_pred CHHHHHHHHHHHHCCC---------CCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCC
T ss_conf 9899999999997098---------7689979999999999997849399967889999999998698893999989966
Q ss_pred CHHHHHHHHHCCCCCEEEC------CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEE
Q ss_conf 2677526664087640305------6881478997643100024786079714621576613468999998631360898
Q gi|254780486|r 124 HASIREGINSGKAQAIAIP------HNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIV 197 (381)
Q Consensus 124 HaSi~~g~~ls~a~~~~f~------HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~Li 197 (381)
-.+....+...|++.+... .-|++++|+.+.. +.+.+|+|. +-|..+++++|.++|++||..+|
T Consensus 81 f~at~~ai~~~Ga~pvfvDid~~t~~id~~~ie~~it~------ktkaIi~Vh----~~G~~~d~~~I~~iak~~~i~vI 150 (375)
T PRK11706 81 FVSTANAFVLRGAKIVFVDIRPDTMNIDETLIEAAITP------KTRAIVPVH----YAGVACEMDTIMALAKKHNLFVV 150 (375)
T ss_pred HHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHCC------CCEEEEEEC----CCCCCCCHHHHHHHHHHCCCEEE
T ss_conf 49999999983996999971687577678999987086------754999967----88986678999998853790898
Q ss_pred ECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCC--CCCCCC-EEEEEEC-CCCCCCC---CCCCCC--C---------EE
Q ss_conf 613112223477764011000013465210013--465653-0267524-5100100---001211--0---------00
Q gi|254780486|r 198 VDEAHATGVCGPLGKGLTHIIEERNNVIVMHSC--SKALGS-SGALVGS-NKIIYDY---LINYAK--P---------FI 259 (381)
Q Consensus 198 vDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~Tl--sKa~g~-~GG~i~~-~~~ii~~---l~~~~~--~---------~i 259 (381)
-|=||++|..- .|+ ..|...++ -+=|| .|.+++ -||+|.. ++++.+. +|+++. . |.
T Consensus 151 EDaA~a~Gs~~-~g~----~~Gt~Gd~-~~fSF~~~K~ittGeGG~i~tnd~~l~~~~~~lr~~G~~~~~~~~g~~~~y~ 224 (375)
T PRK11706 151 EDAAQGVMSTY-KGR----ALGTIGHL-GCFSFHETKNYTAGEGGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYT 224 (375)
T ss_pred ECCCCCCCCCC-CCE----ECCCCCCC-CCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHCCCCCCCE
T ss_conf 34400368766-764----45767998-8858988987877687499979999999999999828761576557876641
Q ss_pred C-----CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHH-HHHHHHHC----CCCC-------CCCCCEEEEEECCHHH
Q ss_conf 0-----1357750257898878988627102247899999-99987641----7978-------9989728999589799
Q gi|254780486|r 260 Y-----TTSPSPILAVVACEALKLIKRKPALHKSLLQLIN-ITDKIANK----KIGF-------SSQSHIQSIVIGDNKS 322 (381)
Q Consensus 260 f-----st~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~-~~~~~~~~----~~g~-------~~~s~I~~v~~gd~~~ 322 (381)
+ .--++-..++-.+..|+.+.+. .++.+++.+ |.+.+... .+-+ ....++.++.+.+...
T Consensus 225 ~~~~G~N~rms~lqAAigl~QL~~ld~~---~~~R~~i~~~Y~~~L~~l~~~~~i~~p~~~~~~~~~~~~~~i~~~~~~~ 301 (375)
T PRK11706 225 WVDIGSSYLPSELQAAYLWAQLEAADRI---NQQRLALWQRYYDALAPLAEAGRIELPSIPDDCKHNAHMFYIKLRDIED 301 (375)
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCEEEEEEEEEECCHHH
T ss_conf 5404764678889999999999988999---9999999999999730510128610455799983300579999567778
Q ss_pred HHHHHHHHHHCCEEEEEECCCCC--CC----C-------------CCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999999977918986228888--88----8-------------7039996287899999999999999998
Q gi|254780486|r 323 CLNIAKNLQKKGFDIRAIRPPTV--PI----N-------------TARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 323 a~~~~~~L~~~Gi~v~~i~~PtV--p~----~-------------~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
-.++.+.|.++||-+....+|.- |. + ...|-+-++..+|++|+++.++++++-.
T Consensus 302 Rd~l~~~L~~~gI~t~~~y~Plh~~p~~~~~~~~~~~~p~se~~~~~~lsLP~~~~Lt~~di~~I~~~ik~ff 374 (375)
T PRK11706 302 RSALINFLKEAGIMAVFHYIPLHSSPAGERFGRFHGEDRYTTKESERLLRLPLFYNLTPVEQRTVIATLLNFF 374 (375)
T ss_pred HHHHHHHHHHCCCCEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 9999999998799832447344249988970877799989999984889887899889999999999999984
No 223
>PRK07503 methionine gamma-lyase; Provisional
Probab=99.80 E-value=2e-17 Score=128.80 Aligned_cols=293 Identities=18% Similarity=0.160 Sum_probs=186.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHH---H-HHHCCCCCEE
Q ss_conf 72244368858999999998401288851674166024565566631689710045420267752---6-6640876403
Q gi|254780486|r 65 GGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIRE---G-INSGKAQAIA 140 (381)
Q Consensus 65 ~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~---g-~~ls~a~~~~ 140 (381)
.=||. | ++....||++||++-|.|.|++|+||..|-.+++.+++++||+|++-.....+.+. . +.--+.++..
T Consensus 58 ~YsR~--~-nPT~~~lE~~la~LEg~~~a~~~sSGmaAi~~~l~~~l~~Gdhiv~~~~~YGgt~~l~~~~l~~~Gi~~~~ 134 (403)
T PRK07503 58 FYSRI--S-NPTLALLEQRMASLEGGEAGLALASGMGAITATLWTLLRPGDEVIVGRTLYGCTFAFLHHGLGEFGVKVRH 134 (403)
T ss_pred EECCC--C-CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCEEEEE
T ss_conf 13089--8-85699999999998499648886278999999999965999989976887532899998446317759998
Q ss_pred ECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHC
Q ss_conf 05688147899764310002478607971462157661346899999863136089861311222347776401100001
Q gi|254780486|r 141 IPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEE 220 (381)
Q Consensus 141 f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~ 220 (381)
+..+|++.+++.++ +++.+|.+|+.-+-...+.|+++|+++|+++|++++||-.-+..++ +..+ .
T Consensus 135 vd~~d~~~~~~ai~-------~~Tkli~~Etp~NP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~-------~~Pl-~ 199 (403)
T PRK07503 135 VDLTDAKALKAAIS-------EKTRMIYFETPANPNMQLVDIAAVVEAARGHDALVVVDNTYCTPYL-------QRPL-E 199 (403)
T ss_pred ECCCCHHHHHHHCC-------CCCEEEEEECCCCCCCEEECHHHHHHHHHHCCCEEEEECCCCCCCC-------CCHH-H
T ss_conf 68989899997518-------6732999952799986630579999999865885998367545140-------1613-3
Q ss_pred CCCCCCCCCCCCCCCC----EEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHH
Q ss_conf 3465210013465653----0267524510010000121100001357750257898878988627102-2478999999
Q gi|254780486|r 221 RNNVIVMHSCSKALGS----SGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINI 295 (381)
Q Consensus 221 ~~~~iv~~TlsKa~g~----~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~ 295 (381)
...+|++.|.+|-+++ .||.|+++++.+..++...--......++|..+..++..|+.|.-+-++ .+...+++++
T Consensus 200 ~GaDivvhS~TKYi~GHsD~l~G~v~~~~~~~~~~r~~~~~~~~G~~lsP~da~L~lRGL~TL~lRm~~~~~nA~~lA~~ 279 (403)
T PRK07503 200 LGADLVVHSATKYLSGHGDITAGLVVGGKALVDRIRLEGLKDMTGAVLSPHDASLLMRGLKTLALRMDRHCANAQQVAEF 279 (403)
T ss_pred CCCCEEEEECCEEECCCCCEEEEEEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 18988999545031378760557997261788999999998742886886888998646775999999999999999999
Q ss_pred HHHHHH-CC---CCC-------------CCCCCEEEEEE-CCHHHHHHHHHHHH--HCCEEE----EEECCCCC------
Q ss_conf 998764-17---978-------------99897289995-89799999999999--779189----86228888------
Q gi|254780486|r 296 TDKIAN-KK---IGF-------------SSQSHIQSIVI-GDNKSCLNIAKNLQ--KKGFDI----RAIRPPTV------ 345 (381)
Q Consensus 296 ~~~~~~-~~---~g~-------------~~~s~I~~v~~-gd~~~a~~~~~~L~--~~Gi~v----~~i~~PtV------ 345 (381)
++.--. .. .|+ ...+.++.+.+ ++...+.++.+.|. ..++-. +-+..|+.
T Consensus 280 L~~hp~V~~V~yPgL~shp~h~la~~q~~g~gg~~sf~l~g~~~~~~~f~~~L~lf~~a~SlGg~eSLi~~pa~~th~~~ 359 (403)
T PRK07503 280 LARQPAVELVHYPGLPSFAQHALAQRQMRLPGGMIAFELKGGIEAGRRFMNALQLFARAVSLGDAESLAQHPASMTHSTY 359 (403)
T ss_pred HHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCCCCCEEECCCCCCCCCC
T ss_conf 97489955898988889801899998678998368999669899999999808946553166775403247633466559
Q ss_pred C--------CCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 8--------88703999628789999999999999999
Q gi|254780486|r 346 P--------INTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 346 p--------~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
+ .....||+++...+.++-|+.+-.+|+.+
T Consensus 360 ~~e~r~~~Gi~~~liRlSVGlEd~~DLi~DL~qAL~a~ 397 (403)
T PRK07503 360 TPEERAHHGISEGLVRLSVGLEDVEDLLADIAQALDAC 397 (403)
T ss_pred CHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 99999866989396999860189999999999999973
No 224
>pfam01041 DegT_DnrJ_EryC1 DegT/DnrJ/EryC1/StrS aminotransferase family. The members of this family are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA, StsC, and StsS. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase EC:2.6.1.50, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin.
Probab=99.80 E-value=1.1e-16 Score=124.22 Aligned_cols=299 Identities=17% Similarity=0.191 Sum_probs=188.6
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHH-CCCCCCCCHHHHCCH
Q ss_conf 9999999999863786887224436885899999999840128885167416602456556663-168971004542026
Q gi|254780486|r 47 LLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTL-PQATDLIVYDKLVHA 125 (381)
Q Consensus 47 ~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l-~~~~d~ii~D~~~Ha 125 (381)
+-++++.+.+...| +++.-+..+++|+++++++|...|+.++||+.|...++.++ .+++|.|++-...-.
T Consensus 6 ~~~~~v~~~l~s~~---------~~~~G~~v~~fE~~~~~~~g~k~~v~~~sgT~Al~lal~a~~~~~gdeVi~p~~t~~ 76 (363)
T pfam01041 6 EELAAVTEVLRSGW---------LTTGGPEVREFEKEFAAYLGVKHAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFV 76 (363)
T ss_pred HHHHHHHHHHHCCC---------CCCCCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCCH
T ss_conf 99999999997398---------147998999999999999784959997588999999999859889299997997759
Q ss_pred HHHHHHHHCCCCCEEECC------CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEC
Q ss_conf 775266640876403056------88147899764310002478607971462157661346899999863136089861
Q gi|254780486|r 126 SIREGINSGKAQAIAIPH------NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVD 199 (381)
Q Consensus 126 Si~~g~~ls~a~~~~f~H------nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivD 199 (381)
+...++...|++.+...= -|++++++.+. ++.+.+|+|. +-|..+++++|.++|++||..||-|
T Consensus 77 at~~ai~~~G~~pvf~Dvd~~t~~id~~~l~~~i~------~~tkaIi~vh----~~G~~~d~~~i~~~~~~~~i~lIED 146 (363)
T pfam01041 77 ATANAVLYLGAKPVFVDIDPDTYNIDPAAIEAAIT------PRTKAIMPVH----LYGQPADMDAIRAIAAEHGLPVIED 146 (363)
T ss_pred HHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHCC------CCCCEEEEEC----CCCCCCCHHHHHHHHHHCCCEEEEE
T ss_conf 88999998699799850645656858999998607------5870999878----9898689999999999849999973
Q ss_pred CCCCCCCCCCCCCEEEEEHHCCCCCCCCCCC--CCCCCC-EEEEEECC-CCCCCC---CCCCCCCE------------EC
Q ss_conf 3112223477764011000013465210013--465653-02675245-100100---00121100------------00
Q gi|254780486|r 200 EAHATGVCGPLGKGLTHIIEERNNVIVMHSC--SKALGS-SGALVGSN-KIIYDY---LINYAKPF------------IY 260 (381)
Q Consensus 200 Eah~~Gv~G~~G~G~~~~~~~~~~~iv~~Tl--sKa~g~-~GG~i~~~-~~ii~~---l~~~~~~~------------if 260 (381)
=||++|..- .|+ ..|...++-+ =|| +|.+.+ .||+|+.+ +++.+. +|+++... -|
T Consensus 147 aA~a~Ga~~-~gk----~~G~~gd~~~-fSF~~~K~ittGeGG~i~tnd~~l~~~~r~lr~~G~~~~~~~~~~~~~~~G~ 220 (363)
T pfam01041 147 AAHAHGATY-KGK----RVGTFGDAAT-FSFFPTKNITTGEGGAVVTDDPELAERARCLRNHGCGRPANKRYRHEVPLGY 220 (363)
T ss_pred CCCCCCCCC-CCE----ECCCCCCCCE-EECCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCC
T ss_conf 132026765-865----4356445210-2057876544689709996999999999999965968898775224506775
Q ss_pred CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH-HHHHHHCC-C---CCCC-----CCCEEEEEECCHH--HHHHHHH
Q ss_conf 13577502578988789886271022478999999-99876417-9---7899-----8972899958979--9999999
Q gi|254780486|r 261 TTSPSPILAVVACEALKLIKRKPALHKSLLQLINI-TDKIANKK-I---GFSS-----QSHIQSIVIGDNK--SCLNIAK 328 (381)
Q Consensus 261 st~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~-~~~~~~~~-~---g~~~-----~s~I~~v~~gd~~--~a~~~~~ 328 (381)
..-|+...++..+..|+.+.+. .++.+++.++ .+.+.... + .... ..+..++.+.+.. .-..+.+
T Consensus 221 N~rmseiqAaigl~qL~~l~~~---~~~R~~i~~~Y~~~L~~~~~~~~~~~~~~~~~~~~~~f~i~~~~~~~~~R~~l~~ 297 (363)
T pfam01041 221 NYRMTELQAAIGLAQLERLDEF---IARRREIAERYQELLAELPGFEPLTLPTEEDDHAWHLFPVLVPEEAAGSRDELVE 297 (363)
T ss_pred CCCCCHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCEEEEEEEEEECCCCHHHHHHHHH
T ss_conf 5676788999999999999999---9999999999999857899941068688887514799999976434233999999
Q ss_pred HHHHCCEEEEEECC-CCC--C---------C----C-----CCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 99977918986228-888--8---------8----8-----7039996287899999999999999
Q gi|254780486|r 329 NLQKKGFDIRAIRP-PTV--P---------I----N-----TARLRISITLNVDEPTIVKLFDILP 373 (381)
Q Consensus 329 ~L~~~Gi~v~~i~~-PtV--p---------~----~-----~~rlRi~v~a~~t~edi~~~~~~l~ 373 (381)
.|.++||-+++..+ |.- | . + ...|.+-.+..+|++|+++.+++|+
T Consensus 298 ~L~~~gI~t~~~y~~pl~~~~~~~~~~~~~~~~~pna~~l~~~~l~LP~~~~Lt~~di~~I~~~IK 363 (363)
T pfam01041 298 ALKEAGIGTRVHYPIPLHLQPYYEDRVYYAPGDLPNAERLASRVLSLPLYPGLTDEEVDRVAEAVR 363 (363)
T ss_pred HHHHCCCCEEEECCCCHHHCHHHHHCCCCCCCCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHC
T ss_conf 999879955865897134297877456888889989999985989897999889999999998639
No 225
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=99.79 E-value=2.6e-17 Score=128.03 Aligned_cols=296 Identities=19% Similarity=0.218 Sum_probs=191.6
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHH-CCHH--HHHHH-HHCCCCCE
Q ss_conf 87224436885899999999840128885167416602456556663168971004542-0267--75266-64087640
Q gi|254780486|r 64 SGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKL-VHAS--IREGI-NSGKAQAI 139 (381)
Q Consensus 64 ~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~-~HaS--i~~g~-~ls~a~~~ 139 (381)
..=||. .++....||++||++-|.|+|++|+||..|-.+++.+++++||.|++-.. ...+ +.+.. .--+.++.
T Consensus 56 ~~YsR~---~nPT~~~lE~~la~LEg~~~a~~~~SGmaAis~~l~~ll~~Gd~vv~~~~~YggT~~l~~~~l~~~Gi~v~ 132 (398)
T PRK08249 56 HIYSRN---TNPTVQALEAKVKELEGAEAATSFSTGMAAISNTLYTFLSPGDRVVSIKDTYGGTNKIFEEFLPRMGVDVT 132 (398)
T ss_pred CEEECC---CCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEE
T ss_conf 514089---88659999999999829970899647899999999997189998998189843799999976015986999
Q ss_pred EECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHH
Q ss_conf 30568814789976431000247860797146215766134689999986313608986131122234777640110000
Q gi|254780486|r 140 AIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIE 219 (381)
Q Consensus 140 ~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~ 219 (381)
.+.-+|.+.+++.++. ++.+|.+|+.-+-.-.+.|+++|+++|+++|+.++||-.-+..++ +..+
T Consensus 133 fvd~~d~~~~~~ai~~-------~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~-------~~Pl- 197 (398)
T PRK08249 133 LCETGDHEQIEREIAK-------GCDLLYLETPTNPTLKITDIRRLSAAAHEVGALVVVDNTFATPIN-------QNPL- 197 (398)
T ss_pred EECCCCHHHHHHHCCC-------CCEEEEEECCCCCCCEEECHHHHHHHHHHCCCEEEEECCCCHHHC-------CCCC-
T ss_conf 8799986999985588-------861899844899974666479999999874996998477420312-------7821-
Q ss_pred CCCCCCCCCCCCCCCCC----EEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHH
Q ss_conf 13465210013465653----0267524510010000121100001357750257898878988627102-247899999
Q gi|254780486|r 220 ERNNVIVMHSCSKALGS----SGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLIN 294 (381)
Q Consensus 220 ~~~~~iv~~TlsKa~g~----~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~ 294 (381)
....+|++.|.+|-+++ .||.+++++++++.++.... +....++|..+..++..|+.+.-+-++ .+...+.++
T Consensus 198 ~~GaDivvhS~TKyi~GHsDvlgGvv~~~~~~~~~l~~~~~--~~G~~lsP~~a~L~~RGL~TL~lRm~r~~~nA~~vA~ 275 (398)
T PRK08249 198 ALGADLVVHSATKFLGGHADALGGVVCGPEALMAQVYHYRE--INGATLDPFAAYLILRGMKTLALRVRQQQENAMALAE 275 (398)
T ss_pred CCCCCEEEECCCCEECCCCCEEEEEECCCHHHHHHHHHHHH--HCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 15798799726620036876351056088999999999997--0488789177899864689799999999889999999
Q ss_pred HHHHHHH-CC---CCC-------------CCCCCEEEEEE-CCHHHHHHHHHHHH--HCCEEE----EEECCCCC-----
Q ss_conf 9998764-17---978-------------99897289995-89799999999999--779189----86228888-----
Q gi|254780486|r 295 ITDKIAN-KK---IGF-------------SSQSHIQSIVI-GDNKSCLNIAKNLQ--KKGFDI----RAIRPPTV----- 345 (381)
Q Consensus 295 ~~~~~~~-~~---~g~-------------~~~s~I~~v~~-gd~~~a~~~~~~L~--~~Gi~v----~~i~~PtV----- 345 (381)
+++.--. .. .|+ .+.+.++.+.+ ++...+.++.+.|. ..++-. +-+.+|+.
T Consensus 276 ~L~~hp~V~~V~yPgL~s~p~h~la~~~~~g~gg~~sf~l~g~~~~~~~f~~~l~l~~~a~SlGg~eSLi~~p~~~th~~ 355 (398)
T PRK08249 276 YLQTEPLVEAVNYPGLPTHPNHAIAKAQMRGFGGMLSFALKGGMDTVRRLLPRLQYAHRAANLGAVETIVGPARTTSHVE 355 (398)
T ss_pred HHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHCCCCEECCCCCCCCCEEECHHHCCCCC
T ss_conf 99839980779899999996889999867999971179981899999999971880500556387661202813247634
Q ss_pred -C--------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf -8--------887039996287899999999999999998873
Q gi|254780486|r 346 -P--------INTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 346 -p--------~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
+ .....||+++...+.++-|+.+-.+|+.+.+|+
T Consensus 356 ~~~e~r~~~Gi~~~liRlSvGlEd~~DLi~DL~qAL~~ir~~~ 398 (398)
T PRK08249 356 NTPEERAALGIPEGLVRISVGIEDTEDLIADLAQAFASVREEL 398 (398)
T ss_pred CCHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHC
T ss_conf 9999999769893949999600999999999999999988559
No 226
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=99.79 E-value=2.8e-17 Score=127.84 Aligned_cols=289 Identities=20% Similarity=0.218 Sum_probs=183.4
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHH-CCHH--HHHH-HHHCCCCCE
Q ss_conf 87224436885899999999840128885167416602456556663168971004542-0267--7526-664087640
Q gi|254780486|r 64 SGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKL-VHAS--IREG-INSGKAQAI 139 (381)
Q Consensus 64 ~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~-~HaS--i~~g-~~ls~a~~~ 139 (381)
..=+|. .++....||+++|.+-|.+.|++|+||..|...++.+++++||.|++-.. ...+ +.+. .+--+.++.
T Consensus 32 ~~Y~R~---~nPT~~~le~~la~LEg~~~a~~~sSGmaAi~~~l~~l~~~Gd~vl~~~~~Yg~t~~~~~~~l~~~Gi~v~ 108 (369)
T cd00614 32 YIYSRI---GNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLKAGDHVVASDDLYGGTYRLFERLLPKLGIEVT 108 (369)
T ss_pred CEECCC---CCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEE
T ss_conf 634199---88679999999999829980899657899999999985288999999578852399999977860892389
Q ss_pred EECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHH
Q ss_conf 30568814789976431000247860797146215766134689999986313608986131122234777640110000
Q gi|254780486|r 140 AIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIE 219 (381)
Q Consensus 140 ~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~ 219 (381)
.|..+|.+++++.++. ++.+|..|+.-+....++||++|+++|+++|+.++||..-+.+++ +..+
T Consensus 109 ~~d~~d~~~~~~~i~~-------~t~li~~EspsNP~l~v~Di~~i~~~A~~~g~~~vvDNT~atp~~-------~~Pl- 173 (369)
T cd00614 109 FVDPDDPEALEAAIKP-------ETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVVDNTFATPYL-------QRPL- 173 (369)
T ss_pred EECCCCHHHHHHHCCC-------CCEEEEEECCCCCCCEECCCHHHHHHHHHCCEEEEEECCCCCHHC-------CCHH-
T ss_conf 7678786889976387-------850899965899970622729999999766717997477431201-------5857-
Q ss_pred CCCCCCCCCCCCCCCCC----EEEEEECC-CCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHH
Q ss_conf 13465210013465653----02675245-10010000121100001357750257898878988627102-24789999
Q gi|254780486|r 220 ERNNVIVMHSCSKALGS----SGALVGSN-KIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLI 293 (381)
Q Consensus 220 ~~~~~iv~~TlsKa~g~----~GG~i~~~-~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~ 293 (381)
....+|++.+++|-+++ .||.|+++ +.+.+.++.... .....++|..+..++..++.+.-+-++ .+...+++
T Consensus 174 ~~GaDivv~S~TKy~~Ghsd~l~G~v~~~~~~~~~~l~~~~~--~~G~~~sp~~a~l~lrgl~TL~lRm~~~~~nA~~lA 251 (369)
T cd00614 174 ELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRL--ALGTILSPFDAWLLLRGLKTLPLRMERHSENALKVA 251 (369)
T ss_pred HHCCCEEEEECCCCCCCCCCEEEEEEEECHHHHHHHHHHHHH--HCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 748968999556312588775768998270888999999998--645768978889988601759999999999999999
Q ss_pred HHHHHHHH-CC---CCC-------------CCCCCEEEEEE-CCHHHHHHHHHHHH--HCCEEE----EEECCCCCC---
Q ss_conf 99998764-17---978-------------99897289995-89799999999999--779189----862288888---
Q gi|254780486|r 294 NITDKIAN-KK---IGF-------------SSQSHIQSIVI-GDNKSCLNIAKNLQ--KKGFDI----RAIRPPTVP--- 346 (381)
Q Consensus 294 ~~~~~~~~-~~---~g~-------------~~~s~I~~v~~-gd~~~a~~~~~~L~--~~Gi~v----~~i~~PtVp--- 346 (381)
++++.... .+ .++ .+.+.++.+.+ ++.+.+.++.+.|. ..|.-. +-+.+|+.-
T Consensus 252 ~~L~~hp~V~~V~yPgL~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~~l~lf~~~~S~Gg~~SLi~~p~~~~~~ 331 (369)
T cd00614 252 EFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLFSLAVSLGGVESLVEHPASMTHS 331 (369)
T ss_pred HHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCEECCCCCCCCCEEECCCCCCCC
T ss_conf 99971999887978789888048999976899971779997698999999998589063312678767156776423553
Q ss_pred -----------CCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf -----------887039996287899999999999999998
Q gi|254780486|r 347 -----------INTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 347 -----------~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
.....||+++... +++.+++-|++.+
T Consensus 332 ~~~~~~~~~~Gi~~~liRlsvGlE----d~eDLi~DL~~AL 368 (369)
T cd00614 332 QLPPEERAAAGITPGLVRLSVGIE----DVEDLIADLEQAL 368 (369)
T ss_pred CCCHHHHHHCCCCCCEEEEEEECC----CHHHHHHHHHHHC
T ss_conf 289999996697929699995009----9999999999853
No 227
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.78 E-value=1.6e-16 Score=123.19 Aligned_cols=281 Identities=19% Similarity=0.213 Sum_probs=180.2
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHH-CCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECC------CCH
Q ss_conf 5899999999840128885167416602456556663-168971004542026775266640876403056------881
Q gi|254780486|r 74 YNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTL-PQATDLIVYDKLVHASIREGINSGKAQAIAIPH------NNI 146 (381)
Q Consensus 74 ~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l-~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H------nD~ 146 (381)
-+..+++|+++++++|...++.++||+.|...++.++ .+++|.|+.-...-.+...++...|++.+...- -|+
T Consensus 17 G~~v~~fE~~~~~~~g~k~~v~~~sgt~Al~lal~~l~~~~gdeVi~p~~t~~at~~ai~~~G~~pv~~Di~~~t~~id~ 96 (352)
T cd00616 17 GPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANAILLLGATPVFVDIDPDTYNIDP 96 (352)
T ss_pred CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCH
T ss_conf 87699999999999785939997688999999999869788399998997639899999985998998407778577588
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCC
Q ss_conf 47899764310002478607971462157661346899999863136089861311222347776401100001346521
Q gi|254780486|r 147 NSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIV 226 (381)
Q Consensus 147 ~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv 226 (381)
+++++.+. ++.+.+|++. +-|-.+++++|.++|++||..||-|=||++|..- .|+ ..|...+. -
T Consensus 97 ~~l~~~i~------~~tkaIi~vh----~~G~~~d~~~i~~~~~~~~i~lIeDaA~a~Gs~~-~~~----~~G~~gd~-~ 160 (352)
T cd00616 97 ELIEAAIT------PRTKAIIPVH----LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATY-KGR----KVGTFGDA-G 160 (352)
T ss_pred HHHHHHCC------CCCCEEEEEC----CCCCCCCHHHHHHHHHHCCCEEEEHHHHHCCCCC-CCE----ECCCCCCC-C
T ss_conf 99997628------6870999968----9898668899999999779899802200216834-671----25664342-5
Q ss_pred CCCC--CCCCCC-EEEEEECC-CCCCCC---CCCCCCCE-----E-----CCCCCCCCHHHHHHHHHHHHHHCCCHHHHH
Q ss_conf 0013--465653-02675245-100100---00121100-----0-----013577502578988789886271022478
Q gi|254780486|r 227 MHSC--SKALGS-SGALVGSN-KIIYDY---LINYAKPF-----I-----YTTSPSPILAVVACEALKLIKRKPALHKSL 289 (381)
Q Consensus 227 ~~Tl--sKa~g~-~GG~i~~~-~~ii~~---l~~~~~~~-----i-----fst~l~P~~~aaa~aal~~l~~~~~~~~~l 289 (381)
+-|| +|.+.+ .||+|+.+ +++.+. +++++..- . |.--|+...++.++..|+.+.+ +.++.
T Consensus 161 ~fSF~~~K~it~geGG~i~tn~~~~~~~~~~lr~~G~~~~~~~~~~~~~G~N~rmsel~Aaigl~qLk~ld~---~~~~R 237 (352)
T cd00616 161 AFSFHPTKNLTTGEGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKLDE---IIARR 237 (352)
T ss_pred CCCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHH---HHHHH
T ss_conf 344787756767773499969999999999999659669988524673683422588899999999998899---99999
Q ss_pred HHHHHH-HHHHHHC-CCCC-------CCCCCEEEEEECCH--HHHHHHHHHHHHCCEEEEEECCCCCCC-----------
Q ss_conf 999999-9987641-7978-------99897289995897--999999999997791898622888888-----------
Q gi|254780486|r 290 LQLINI-TDKIANK-KIGF-------SSQSHIQSIVIGDN--KSCLNIAKNLQKKGFDIRAIRPPTVPI----------- 347 (381)
Q Consensus 290 ~~~~~~-~~~~~~~-~~g~-------~~~s~I~~v~~gd~--~~a~~~~~~L~~~Gi~v~~i~~PtVp~----------- 347 (381)
+++.++ .+.+... .+.+ .+..+..++.+.+. ..-..+.+.|.++||-+++..+|....
T Consensus 238 ~~i~~~Y~~~L~~~~~i~~~~~~~~~~~~~~~~~i~l~~~~~~~R~~l~~~L~~~gI~~~~~y~p~~~~~~~~~~~~~~~ 317 (352)
T cd00616 238 REIAERYKELLADLPGIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVHYPPLHHQPPYKKLLGYPP 317 (352)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHCCCCEEEECCCHHHCHHHHHHCCCCC
T ss_conf 99999999983789981616669998335579999986502105999999999879985802833333849897259988
Q ss_pred ---------CCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf ---------87039996287899999999999999
Q gi|254780486|r 348 ---------NTARLRISITLNVDEPTIVKLFDILP 373 (381)
Q Consensus 348 ---------~~~rlRi~v~a~~t~edi~~~~~~l~ 373 (381)
....|.+-.+...|++|+++.+++|+
T Consensus 318 ~~~pna~~i~~~~l~LP~~~~Lt~~di~~I~~~IK 352 (352)
T cd00616 318 GDLPNAEDLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred CCCHHHHHHHHCEEECCCCCCCCHHHHHHHHHHHC
T ss_conf 99989999984979898999879999999999749
No 228
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=99.78 E-value=7.4e-17 Score=125.23 Aligned_cols=283 Identities=18% Similarity=0.182 Sum_probs=178.3
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCC-HH--HHHHH-HHCCCCCEEECCCCHHHH
Q ss_conf 589999999984012888516741660245655666316897100454202-67--75266-640876403056881478
Q gi|254780486|r 74 YNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVH-AS--IREGI-NSGKAQAIAIPHNNINSF 149 (381)
Q Consensus 74 ~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~H-aS--i~~g~-~ls~a~~~~f~HnD~~~L 149 (381)
++....||+++|++-|.+.|++|+||..|- .++-++.+++|.|++-...- .+ +.+.. .--+.++..|...|++++
T Consensus 51 nPt~~~le~~la~LEg~~~a~~f~SGmaAi-~~~l~~l~~Gd~vv~~~~~Yg~t~~~~~~~l~~~Gi~~~~~d~~d~~~~ 129 (366)
T PRK08247 51 NPTRGLLEQAIADLEGGDQGFACSSGMAAI-QLVMSLFRSGDELIVSSDLYGGTYRLFEEHWKKWGVRFVYVNTASIKAI 129 (366)
T ss_pred CHHHHHHHHHHHHHHCCCCEEECCCHHHHH-HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHCCCCEEEEEECCCCHHHH
T ss_conf 867999999999982985053116689999-9999973899989995896864889988775077469998488897999
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCC
Q ss_conf 99764310002478607971462157661346899999863136089861311222347776401100001346521001
Q gi|254780486|r 150 AENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHS 229 (381)
Q Consensus 150 e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~T 229 (381)
++.++. +..+|.+|+.-+-.-.+.||+++.++|+++|+.++||..-+..++ +..+ ....+|++.|
T Consensus 130 ~~~i~~-------~Tkli~~Esp~NP~l~v~Di~~i~~iA~~~g~~~vvDNT~atP~~-------~~Pl-~~GaDivihS 194 (366)
T PRK08247 130 EQAITP-------NTKAIFIETPTNPLMQETDIAAIAKIAKKHGLLLIVDNTFYTPVL-------QRPL-TEGADIVIHS 194 (366)
T ss_pred HHHCCC-------CCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCCC-------CCCH-HCCCCEEEEE
T ss_conf 975386-------754999855999853501599999998646704984177344133-------5741-0289789974
Q ss_pred CCCCCCC----EEEEEECC-CCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHH-HHC
Q ss_conf 3465653----02675245-10010000121100001357750257898878988627102-24789999999987-641
Q gi|254780486|r 230 CSKALGS----SGALVGSN-KIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINITDKI-ANK 302 (381)
Q Consensus 230 lsKa~g~----~GG~i~~~-~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~~~-~~~ 302 (381)
++|-+++ .||.++++ +++.+.++...+. ....++|..+..++..++.+.-+-++ .+...+++++++.. .-+
T Consensus 195 ~TKyi~GhsDvl~G~vv~~~~~~~~~l~~~~~~--~G~~~~p~~a~l~~rGl~TL~lR~~~~~~nA~~lA~~L~~hp~V~ 272 (366)
T PRK08247 195 ATKYLGGHNDVLAGLVVAKGQELCERLAYYQNA--AGAVLSPFDSWLLIRGMKTLALRMRQHEENAKALAAFLNEQPGVT 272 (366)
T ss_pred CCCCCCCCCCEEEEEEEECCHHHHHHHHHHHHH--CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 242015888715479972738888899999973--366779377778863525099999999999999999986199704
Q ss_pred CCCCCCCCCEEEEEECCHHHHHHHHHHHH--HCCEEE----EEECCCCC------CC--------CCCEEEEECCCCCCH
Q ss_conf 79789989728999589799999999999--779189----86228888------88--------870399962878999
Q gi|254780486|r 303 KIGFSSQSHIQSIVIGDNKSCLNIAKNLQ--KKGFDI----RAIRPPTV------PI--------NTARLRISITLNVDE 362 (381)
Q Consensus 303 ~~g~~~~s~I~~v~~gd~~~a~~~~~~L~--~~Gi~v----~~i~~PtV------p~--------~~~rlRi~v~a~~t~ 362 (381)
+.-+++.+.++.+.+.+.+.+..+.+.|. ..+.-. +-+.+|+. |. ....||+++...+.+
T Consensus 273 ~V~yPG~gg~~sf~l~~~~~~~~f~~~l~l~~~a~SlGg~eSLi~~pa~~th~~~~~~~r~~~Gi~~~liRlSvGLEd~~ 352 (366)
T PRK08247 273 DVLYPGKGGMLSFRLQDEEWVNPFLKSLKLITFAESLGGVESFITYPATQTHMDIPEEIRIANGVCNRLLRFSVGIENVE 352 (366)
T ss_pred EEECCCCCCEEEEEECCHHHHHHHHHHCCCCEEECCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEEEECCHH
T ss_conf 89569987779999788899999998474366812657677244576424542289999997598929599995008999
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999999
Q gi|254780486|r 363 PTIVKLFDILPQ 374 (381)
Q Consensus 363 edi~~~~~~l~~ 374 (381)
+-|+.+-.+|++
T Consensus 353 DLi~Dl~qAL~~ 364 (366)
T PRK08247 353 DLKADLKQAFKQ 364 (366)
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999995
No 229
>PRK06767 methionine gamma-lyase; Provisional
Probab=99.78 E-value=9.1e-17 Score=124.67 Aligned_cols=290 Identities=18% Similarity=0.157 Sum_probs=176.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHH---HHHH-HHCCCCCEEE
Q ss_conf 22443688589999999984012888516741660245655666316897100454202677---5266-6408764030
Q gi|254780486|r 66 GSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASI---REGI-NSGKAQAIAI 141 (381)
Q Consensus 66 ~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi---~~g~-~ls~a~~~~f 141 (381)
=+| .| ++....||+++|++-|.|+|++|+||..|-.+++.+++++||+|++-.....+. .+.. +--+.++..+
T Consensus 55 Y~R--~~-nPT~~~le~~la~LEgg~~a~~~sSGmaAi~~~ll~~l~~Gd~vv~~~~~Yg~T~~l~~~~~~~~gI~~~~~ 131 (386)
T PRK06767 55 YSR--LG-NPTVKLFEERMAVLEGGEEALAFGSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFC 131 (386)
T ss_pred ECC--CC-CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHHCCEEEEEE
T ss_conf 338--98-867999999999984997168852789999999973079999899837982234669999888737589996
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCC
Q ss_conf 56881478997643100024786079714621576613468999998631360898613112223477764011000013
Q gi|254780486|r 142 PHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEER 221 (381)
Q Consensus 142 ~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~ 221 (381)
.-+|.+++++.++ +++.+|.+|+.-+-.-.+.||++|.++|+++|++++||-.-+..++ +..+ ..
T Consensus 132 d~~~~~~~~~~i~-------~~Tklv~~EspsNP~l~v~Di~~i~~~A~~~g~~~vvDNT~atP~~-------~~Pl-~~ 196 (386)
T PRK06767 132 DMETEADIENKIR-------PNTKLIFVETPINPTMKLIDLKQVIRVAKRNGLLVIVDNTFCSPYL-------QRPL-EL 196 (386)
T ss_pred CCCCHHHHHHHCC-------CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCC-------CCCC-CC
T ss_conf 8988899997568-------8825999977999876712799999986006734997457642200-------1544-36
Q ss_pred CCCCCCCCCCCCCCC----EEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHH
Q ss_conf 465210013465653----0267524510010000121100001357750257898878988627102-24789999999
Q gi|254780486|r 222 NNVIVMHSCSKALGS----SGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINIT 296 (381)
Q Consensus 222 ~~~iv~~TlsKa~g~----~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~ 296 (381)
..+|++.+++|-+++ .||.+.++++.+...+...+.. +...++|..+...+..++.+.-+-++ .+...+.++++
T Consensus 197 GaDivihS~TKYi~GHsD~l~G~vv~~~~~~~~~~~~~~~~-~G~~~sp~~a~l~~rGl~TL~lRm~~~~~nA~~lA~~L 275 (386)
T PRK06767 197 GCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKD-IGGIMAPFDAWLLLRGLKTLAVRMDRHCDNAEKIVSFL 275 (386)
T ss_pred CCCEEEEECCCCCCCCCCCEEEEEEECHHHHHHHHHHHHHH-CCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 79789971464004776603138861679999999999984-17878934778986267878999999999999999999
Q ss_pred HHHHH-CCC----------CCCCCCCEEEEEE-CCHHHHHHHHHHHH--HCCEEE----EEECCCCCCC-----------
Q ss_conf 98764-179----------7899897289995-89799999999999--779189----8622888888-----------
Q gi|254780486|r 297 DKIAN-KKI----------GFSSQSHIQSIVI-GDNKSCLNIAKNLQ--KKGFDI----RAIRPPTVPI----------- 347 (381)
Q Consensus 297 ~~~~~-~~~----------g~~~~s~I~~v~~-gd~~~a~~~~~~L~--~~Gi~v----~~i~~PtVp~----------- 347 (381)
+..-. ... -+...+.++.+.+ ++...+..+.+.|. ..+.-. +-+.+|+.-.
T Consensus 276 ~~hp~V~~V~yP~~~la~k~~~~~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~SlGg~eSLi~~p~~~~h~~~~~e~r~~ 355 (386)
T PRK06767 276 KNHDAVEGVWYPEGELASRQMKRGGGVISFSIKGGKEETQAFINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQE 355 (386)
T ss_pred HCCCCCCEEECCCHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCCCCCCCCHHHHHH
T ss_conf 63998375879688899887213894689999388999999998388752420567763023576423564589999986
Q ss_pred ---CCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf ---870399962878999999999999999
Q gi|254780486|r 348 ---NTARLRISITLNVDEPTIVKLFDILPQ 374 (381)
Q Consensus 348 ---~~~rlRi~v~a~~t~edi~~~~~~l~~ 374 (381)
....+|+++...+.++=|+.+-.+|++
T Consensus 356 ~Gi~~~lvRlSvGlEd~~DLi~Dl~qAL~~ 385 (386)
T PRK06767 356 MGIYDNLIRLSVGLESWEDIVSDLEQALKK 385 (386)
T ss_pred CCCCCCEEEEEEEECCHHHHHHHHHHHHHC
T ss_conf 697929799994109999999999999841
No 230
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=99.78 E-value=3.7e-17 Score=127.06 Aligned_cols=283 Identities=18% Similarity=0.197 Sum_probs=176.3
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHH-CCHHH--HHH-HHHCCCCCEEECCCCHHHH
Q ss_conf 5899999999840128885167416602456556663168971004542-02677--526-6640876403056881478
Q gi|254780486|r 74 YNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKL-VHASI--REG-INSGKAQAIAIPHNNINSF 149 (381)
Q Consensus 74 ~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~-~HaSi--~~g-~~ls~a~~~~f~HnD~~~L 149 (381)
++....||++||++-|.|.|++|+||..|- .++-+++++||.|++-.. ...+. .+- ..--+.++..+.-+|++++
T Consensus 49 nPt~~~lE~~la~LEg~~~a~~~sSGmAAi-~a~la~~~~Gd~iv~~~~~Yg~t~~~~~~~l~~~GI~~~~vd~~d~~~~ 127 (379)
T PRK06176 49 NPTRFALEELIADLEGGVKGFAFASGLAGI-HAVFSLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLSQI 127 (379)
T ss_pred CHHHHHHHHHHHHHHCCCCEEECCCHHHHH-HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHH
T ss_conf 854999999999982986533125579999-9999986899989981898887767459876447849998678676889
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCC
Q ss_conf 99764310002478607971462157661346899999863136089861311222347776401100001346521001
Q gi|254780486|r 150 AENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHS 229 (381)
Q Consensus 150 e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~T 229 (381)
++.++. ++.+|.+|+.-+-...++|+++++++|+++|+.++||-.-+..++ +..+ ....+|++.|
T Consensus 128 ~~~i~~-------~Tklv~~EspsNP~l~v~Di~~ia~ia~~~gi~~vvDNT~atP~~-------~~Pl-~~GaDiVihS 192 (379)
T PRK06176 128 KKAIKP-------NTKALYLETPSNPLLKITDLAQCASVAKDHGLLTIVDNTFATPYY-------QNPL-LLGADIVVHS 192 (379)
T ss_pred HHHCCC-------CCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCC-------CCHH-HHCCCEEEEE
T ss_conf 965687-------745999977999876015858999999976987997367215133-------2623-4189889995
Q ss_pred CCCCCCC----EEEEEECC-CCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHH-C
Q ss_conf 3465653----02675245-10010000121100001357750257898878988627102-2478999999998764-1
Q gi|254780486|r 230 CSKALGS----SGALVGSN-KIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINITDKIAN-K 302 (381)
Q Consensus 230 lsKa~g~----~GG~i~~~-~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~~~~~-~ 302 (381)
.+|-+++ .||.|+++ +++.+.+...-. .+...++|..+..++..|+.+.-+-++ .+...+.+++++..-. .
T Consensus 193 ~TKyi~GhsD~l~G~vv~~~~~~~~~~~~~~~--~~G~~l~p~~a~ll~rGL~TL~lR~~~~~~nA~~vA~~L~~hp~V~ 270 (379)
T PRK06176 193 GTKYLGGHSDVVAGLVTTNNEALAQEIAFFQN--AIGGVLGPQDSWLLQRGIKTLGLRMEAHQKNALCVAEFLEKHPKVE 270 (379)
T ss_pred CCCCCCCCCCCCCEEEECCCHHHHHHHHHHHH--HCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 45011478774023883496899999999997--5077778467899972225289999999999999999987199826
Q ss_pred C---CCC-------------CCCCCEEEEEECCHHHHHHHHHHHH--HCCEEE----EEECCCCC--------------C
Q ss_conf 7---978-------------9989728999589799999999999--779189----86228888--------------8
Q gi|254780486|r 303 K---IGF-------------SSQSHIQSIVIGDNKSCLNIAKNLQ--KKGFDI----RAIRPPTV--------------P 346 (381)
Q Consensus 303 ~---~g~-------------~~~s~I~~v~~gd~~~a~~~~~~L~--~~Gi~v----~~i~~PtV--------------p 346 (381)
+ .++ .+.+.++.+.+.+...+..+.+.|. ..+.-. +-+..|+. .
T Consensus 271 ~V~yPgL~s~p~~~la~~~~~g~gg~~sf~l~~~~~a~~f~~~l~lf~~a~slGg~eSLi~~P~~~th~~~~~e~r~~~G 350 (379)
T PRK06176 271 KVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKNDSEAVAFVESLKLFILGESLGGVESLVGVPAFMTHACIPKEQREAAG 350 (379)
T ss_pred EEECCCCCCCCCHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCCCEEECCCCCCCCEEECCCCCCCCCCCHHHHHHCC
T ss_conf 79898999994399999767899985478856899999999818825462166887604247632255448999998669
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 8870399962878999999999999999
Q gi|254780486|r 347 INTARLRISITLNVDEPTIVKLFDILPQ 374 (381)
Q Consensus 347 ~~~~rlRi~v~a~~t~edi~~~~~~l~~ 374 (381)
.....+|+++.....++-|+.+-.+|+.
T Consensus 351 i~~~liRlSvGlEd~~DLi~Dl~~AL~~ 378 (379)
T PRK06176 351 IRDGLVRLSVGIEHEQDLLEDLEQAFAK 378 (379)
T ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHC
T ss_conf 8939499995119999999999999833
No 231
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase; InterPro: IPR013375 The aminoacyl-tRNA synthetases (6.1.1. from EC) catalyse the attachment of an amino acid to its cognate transfer RNA molecule in a highly specific two-step reaction. These proteins differ widely in size and oligomeric state, and have limited sequence homology . The 20 aminoacyl-tRNA synthetases are divided into two classes, I and II. Class I aminoacyl-tRNA synthetases contain a characteristic Rossman fold catalytic domain and are mostly monomeric . Class II aminoacyl-tRNA synthetases share an anti-parallel beta-sheet fold flanked by alpha-helices , and are mostly dimeric or multimeric, containing at least three conserved regions , , . However, tRNA binding involves an alpha-helical structure that is conserved between class I and class II synthetases. In reactions catalysed by the class I aminoacyl-tRNA synthetases, the aminoacyl group is coupled to the 2'-hydroxyl of the tRNA, while, in class II reactions, the 3'-hydroxyl site is preferred. The synthetases specific for arginine, cysteine, glutamic acid, glutamine, isoleucine, leucine, methionine, tyrosine, tryptophan and valine belong to class I synthetases; these synthetases are further divided into three subclasses, a, b and c, according to sequence homology. The synthetases specific for alanine, asparagine, aspartic acid, glycine, histidine, lysine, phenylalanine, proline, serine, and threonine belong to class-II synthetases . Many archaeal species lack cysteinyl-tRNA synthetase, an essential enzyme that provides Cys-tRNA(Cys) in other organisms. Instead, in a two step pathway, tRNA-Cys is acylated with O-phosphoserine (Sep) to form Sep-tRNA(Cys), which is subsequently converted to Cys-tRNA(Cys) . This pathway is also thought to function as the sole route of cysteine biosynthesis in these organisms. Several other archaeal species use both this pathway and direct tRNA(Cys) aminoacylation to synthesize Cys-tRNA(Cys), but this pathway appears to be the only route for cysteine biosynthesis. Proteins in this entry catalyse the second step in this pathway using pyridoxal phosphate and a sulphur donor to synthesize Cys from Sep while attached to the tRNA..
Probab=99.78 E-value=2.6e-17 Score=128.05 Aligned_cols=316 Identities=16% Similarity=0.235 Sum_probs=218.4
Q ss_pred HHHHHHHHHHHHHCCCCCC-----CCCCC-CCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHH
Q ss_conf 9999999999863786887-----22443-68858999999998401288851674166024565566631689710045
Q gi|254780486|r 47 LLREKILSSLDSKIPIGSG-----GSRLL-CGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYD 120 (381)
Q Consensus 47 ~v~~a~~~a~~~~~g~~~~-----~sr~~-~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D 120 (381)
-+.++|.+|+- .||=|.| .=||= --.++++.=+|+.||+|+|.+.+-+++---.+=-+++.+|+.+||.|+.|
T Consensus 19 vLt~~ArkAl~-EfGDGYSVCDfC~G~Ld~v~~PpI~~F~~daLA~FlG~D~~R~t~GARe~KfaVMhalC~~GD~vV~D 97 (381)
T TIGR02539 19 VLTEAARKALV-EFGDGYSVCDFCEGRLDEVTKPPIKDFLEDALAEFLGMDVVRVTHGAREGKFAVMHALCKEGDVVVLD 97 (381)
T ss_pred CCHHHHHHHEE-EECCCCEEEECCCCEECCCCCCCHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHCCCCCEEEEC
T ss_conf 78377871004-22685238530387703525883100045542667279745406775024578876408998989985
Q ss_pred HHCCHHHHHHHHHCCCCCEEEC-CC-------CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 4202677526664087640305-68-------814789976431000247860797146215766134689999986313
Q gi|254780486|r 121 KLVHASIREGINSGKAQAIAIP-HN-------NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDY 192 (381)
Q Consensus 121 ~~~HaSi~~g~~ls~a~~~~f~-Hn-------D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y 192 (381)
.++|=|-+.+|.=++.++.-++ |. |++.=.+.+++..+..++...++++==|=|-.|.++|=+++.++|+++
T Consensus 98 ~~AHYtsyvAAEragl~v~eVPy~~g~P~Y~v~~e~Y~~viee~~d~~G~~~~LallThvDG~YGNL~DA~kva~vc~~~ 177 (381)
T TIGR02539 98 GLAHYTSYVAAERAGLNVKEVPYETGHPEYKVDPEGYKEVIEEVEDESGKPVALALLTHVDGEYGNLADAKKVAKVCREK 177 (381)
T ss_pred CCCCHHHHHHHHHCCCEEEECCCCCCCCEEEECHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHC
T ss_conf 87454458999754972788165588860764166788888655202798834899840268867511245687665420
Q ss_pred CEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE--EEEECCCCCCCCCCCCC--CCE----------
Q ss_conf 6089861311222347776401100001346521001346565302--67524510010000121--100----------
Q gi|254780486|r 193 DGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG--ALVGSNKIIYDYLINYA--KPF---------- 258 (381)
Q Consensus 193 ~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G--G~i~~~~~ii~~l~~~~--~~~---------- 258 (381)
|+-|++.=|++.| |-- .+.-. ...|+++||=-|+|++.| |.++-+.++-+.+...+ ++-
T Consensus 178 gvPlLLNCAY~vG---RmP---v~~ke-~~~DFiVGSGHKSMAASaP~GvLa~~eE~~~~v~r~SslrGdvsG~~~~~KE 250 (381)
T TIGR02539 178 GVPLLLNCAYTVG---RMP---VSAKE-IKADFIVGSGHKSMAASAPCGVLAMSEEWEDKVLRKSSLRGDVSGRKFPVKE 250 (381)
T ss_pred CCCEEECCCCEEE---EEC---CCCCC-CCCCEEEECCCCHHHHCCCEEECCCCCCCCCCHHCCCCCCCCCCCCCCCCCE
T ss_conf 7862212450521---003---15777-7876778068513221266002145422234011023210033663447412
Q ss_pred ---ECCCCC-CCCHHHHHHHHHHHHHHC-CCHHHHH---HHHHHHHHHHH-HCCCCCCCCCC-EEEEEE--------CCH
Q ss_conf ---001357-750257898878988627-1022478---99999999876-41797899897-289995--------897
Q gi|254780486|r 259 ---IYTTSP-SPILAVVACEALKLIKRK-PALHKSL---LQLINITDKIA-NKKIGFSSQSH-IQSIVI--------GDN 320 (381)
Q Consensus 259 ---ifst~l-~P~~~aaa~aal~~l~~~-~~~~~~l---~~~~~~~~~~~-~~~~g~~~~s~-I~~v~~--------gd~ 320 (381)
...|+. .| +....||+-.+.++ ..+-+.+ +-.+..++++. -..+|..+.+| .+.+.. .++
T Consensus 251 vElLGCT~rGap--~~TlmASfP~VveRV~~Wd~Ev~ktRy~v~eLE~igG~~QlG~kPk~HDLv~FEtPgf~Eia~~~k 328 (381)
T TIGR02539 251 VELLGCTSRGAP--IVTLMASFPHVVERVKRWDEEVKKTRYFVAELEDIGGFKQLGVKPKEHDLVKFETPGFHEIAKKHK 328 (381)
T ss_pred EEECCCCCCHHH--HHHHHHCCCHHHHHCCCHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCEEECCCCCHHHHCCCC
T ss_conf 774486324047--999973281011220231566777657888764217888648688825641444884013414487
Q ss_pred HHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 99999999999779189862288888887039996287899999999999999998873
Q gi|254780486|r 321 KSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 321 ~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
++-.-++++|.+|||. .|+. =-+..|-+++ ...|+||++..+++|++|++|-
T Consensus 329 r~GyFLY~ELKkRgi~--GI~~----G~Tk~~K~Sv-YGL~~Eqv~~Vv~sf~eI~e~~ 380 (381)
T TIGR02539 329 RRGYFLYEELKKRGIV--GIRS----GQTKEIKLSV-YGLTKEQVEYVVDSFKEIVEEY 380 (381)
T ss_pred CCCCCHHHHHHHCCCE--ECCC----CCCEEEEEEE-ECCCCCHHHHHHHHHHHHHHHC
T ss_conf 9776405665315830--0178----8742776433-1275211444467899999854
No 232
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.78 E-value=9.7e-16 Score=118.26 Aligned_cols=291 Identities=14% Similarity=0.131 Sum_probs=183.9
Q ss_pred CCHHHHHHHHHHHHHCCCCC---EEE-ECCCCHHHHHHHHHHCCCCCCCCHHHHCCHH--HHHHHHHCCCCCEEECC---
Q ss_conf 85899999999840128885---167-4166024565566631689710045420267--75266640876403056---
Q gi|254780486|r 73 NYNQHLELEEEAADFFGFEK---MLY-FGSGYAANMAILSTLPQATDLIVYDKLVHAS--IREGINSGKAQAIAIPH--- 143 (381)
Q Consensus 73 ~~~~~~~lE~~lA~~~g~e~---al~-~~sG~~An~~~i~~l~~~~d~ii~D~~~HaS--i~~g~~ls~a~~~~f~H--- 143 (381)
...++.++.+.|.++++..+ +++ ..||+.|+.+++..+..|+|-|+.=..-..+ +.+=++..+.++..++.
T Consensus 35 F~~l~~~~~~~L~~l~~~~~~~~~v~~~gSGT~amEaai~nl~~~gdkvLv~~~G~FG~R~~~ia~~~g~~v~~l~~~~g 114 (368)
T PRK13479 35 FNAITASVRADLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGARIAKIAEYLGIAHVVLDTGED 114 (368)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHCCCEEEEECCCC
T ss_conf 99999999999999957888707999716867999999961547999799981792799999999981997599878999
Q ss_pred --CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCC
Q ss_conf --881478997643100024786079714621576613468999998631360898613112223477764011000013
Q gi|254780486|r 144 --NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEER 221 (381)
Q Consensus 144 --nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~ 221 (381)
-|++.+|+.|++... -+.-.++-.|. -+|...||++|.++|++|+++++||-+-|+|. ..-....-
T Consensus 115 ~~~~~~~ve~~L~~~~~--~~~v~~vH~ET---STGvln~l~~i~~~~~~~~~lliVDaVSs~G~-------~~~~~d~w 182 (368)
T PRK13479 115 EPPDAAAVEAALAADPR--ITHVALVHCET---TTGILNPLDEIAAVVKRHGKRLIVDAMSSFGA-------IPIDIAEL 182 (368)
T ss_pred CCCCHHHHHHHHHHCCC--CCEEEEEECCC---CCCCCCCHHHHHHHHHHCCCEEEEECCCCCCC-------CEECCCCC
T ss_conf 98899999999974999--67899985067---72031679999999985498699970200157-------21102445
Q ss_pred CCCCCCCCCCCCCCC-EE-EEEECCCCCCCCCCCCCCCEECC-------------C--CCCCCHHHHHHHHHHHHHHC--
Q ss_conf 465210013465653-02-67524510010000121100001-------------3--57750257898878988627--
Q gi|254780486|r 222 NNVIVMHSCSKALGS-SG-ALVGSNKIIYDYLINYAKPFIYT-------------T--SPSPILAVVACEALKLIKRK-- 282 (381)
Q Consensus 222 ~~~iv~~TlsKa~g~-~G-G~i~~~~~ii~~l~~~~~~~ifs-------------t--~l~P~~~aaa~aal~~l~~~-- 282 (381)
..+++++.=-|+|++ -| +|++.++...+..+...+++.+. + .+|.....+..++|+.+.++
T Consensus 183 giD~~~tgSQK~l~~pPGLs~v~~s~~a~~~~~~~~~~~yldl~~~~~~~~~~~~~~~Tp~v~li~aL~eaL~~i~~EGg 262 (368)
T PRK13479 183 GIDALISSANKCIEGVPGFGFVIARRSALEACKGNSRSLALDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLQLEEEGG 262 (368)
T ss_pred CEEEEEECCCCCCCCCCCCEEEEECHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 35699953765145799710122089999987425887663689999998644998868828999999999999998318
Q ss_pred -CCHHHHHHHHHHHHHHHHHCCCCCC------CCCC-EEEEEECC--HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEE
Q ss_conf -1022478999999998764179789------9897-28999589--799999999999779189862288888887039
Q gi|254780486|r 283 -PALHKSLLQLINITDKIANKKIGFS------SQSH-IQSIVIGD--NKSCLNIAKNLQKKGFDIRAIRPPTVPINTARL 352 (381)
Q Consensus 283 -~~~~~~l~~~~~~~~~~~~~~~g~~------~~s~-I~~v~~gd--~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rl 352 (381)
+.+.++.++..+.... ..+.+|+. ..|| +..|.+++ .....++.+.|.++|+.+.+-. ..++ ..+
T Consensus 263 l~~r~~r~~~~~~~~~~-~~~~lGl~~~~~~~~~s~tvtav~~P~~~~~d~~~~~~~l~~~g~~i~~G~---~~~~-~~f 337 (368)
T PRK13479 263 VPARGARYARNCRTLVA-GMRALGFEPLLDDEIQSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPGK---LTQV-DTF 337 (368)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHCCCCCCCCHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCEEECCC---CCCC-CEE
T ss_conf 89999999999999999-999738765789456598679997678856359999999997793896885---5778-979
Q ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 9962878999999999999999988738
Q gi|254780486|r 353 RISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 353 Ri~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
||.---..+++||.+++++|++++++++
T Consensus 338 RIGhMG~~~~~di~~~l~ale~~L~~~G 365 (368)
T PRK13479 338 RIGCIGAVDAADIRRLVAAIAEALYWMG 365 (368)
T ss_pred EEECCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 8877999999999999999999999859
No 233
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=99.78 E-value=8.2e-17 Score=124.96 Aligned_cols=291 Identities=20% Similarity=0.202 Sum_probs=182.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHH---HHH-HHCCCCCEE
Q ss_conf 7224436885899999999840128885167416602456556663168971004542026775---266-640876403
Q gi|254780486|r 65 GGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIR---EGI-NSGKAQAIA 140 (381)
Q Consensus 65 ~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~---~g~-~ls~a~~~~ 140 (381)
.=||. | ++....||+++|++-|.|+|++|+||..|-.+++.+++++||+|++-...-...+ +.. +--+.++..
T Consensus 58 ~YsR~--~-NPT~~~lE~~la~LEg~~~a~~~~SGmaAi~~~lla~l~~Gdhiv~~~~~Yg~t~~l~~~~l~~~Gi~~~~ 134 (397)
T PRK07504 58 IYSRY--S-NPTVDMFEKRMCALEGAEDARATASGMAAVTAAILCQLKAGDHVVAARALFGSCRYVVETLLPRYGIESTL 134 (397)
T ss_pred EEECC--C-CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEE
T ss_conf 34089--8-86499999999998299859873449999999999855899989855887556999999998607858998
Q ss_pred ECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHC
Q ss_conf 05688147899764310002478607971462157661346899999863136089861311222347776401100001
Q gi|254780486|r 141 IPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEE 220 (381)
Q Consensus 141 f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~ 220 (381)
+.-+|++++++.++ +++.+|.+|+.-+-...+.|+++|+++|+++|+.++||..-+..++ +..+ .
T Consensus 135 vd~~d~~~~~~ai~-------~~Tklv~~EspsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~-------~~Pl-~ 199 (397)
T PRK07504 135 VDGLDLDNWEKAVR-------PNTKVFFLESPTNPTLEVIDIAAVAEIANQAGAKLVVDNVFATPLF-------QKPL-E 199 (397)
T ss_pred ECCCCHHHHHHHCC-------CCCEEEEEECCCCCCCEECCCHHHHHHHHHCCCEEEEECCCCCCCC-------CCHH-H
T ss_conf 78988588997458-------7753999854899974513719999999982995997366221112-------6845-6
Q ss_pred CCCCCCCCCCCCCCCC----EEEEEECCCCCCCC-CCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHH
Q ss_conf 3465210013465653----02675245100100-00121100001357750257898878988627102-247899999
Q gi|254780486|r 221 RNNVIVMHSCSKALGS----SGALVGSNKIIYDY-LINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLIN 294 (381)
Q Consensus 221 ~~~~iv~~TlsKa~g~----~GG~i~~~~~ii~~-l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~ 294 (381)
...+|++.|.+|-+++ .||.|+++++++.. ++...+ .....++|..+...+..|+.+.-+-++ .+...++++
T Consensus 200 ~GaDiVvhS~TKyi~GHsDvlgGvv~~~~~~~~~~~~~~~~--~~G~~~~p~~a~l~lRGL~TL~lRm~r~~~nA~~iA~ 277 (397)
T PRK07504 200 LGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFR--HTGPSLSPFNAWVLLKGLETLAVRVRQQTESAAAIAD 277 (397)
T ss_pred HCCCEEEEECCCCCCCCCCEEEEEEECCHHHHHHHHHHHHH--HCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 28887997425212588762546995558999999999999--7188788378899871677299999999999999999
Q ss_pred HHHHHHH-CC---CCC-------------CCCCCEEEEEE-CCHHHHHHHHHHHH--HCCEEE----EEECCCCCC----
Q ss_conf 9998764-17---978-------------99897289995-89799999999999--779189----862288888----
Q gi|254780486|r 295 ITDKIAN-KK---IGF-------------SSQSHIQSIVI-GDNKSCLNIAKNLQ--KKGFDI----RAIRPPTVP---- 346 (381)
Q Consensus 295 ~~~~~~~-~~---~g~-------------~~~s~I~~v~~-gd~~~a~~~~~~L~--~~Gi~v----~~i~~PtVp---- 346 (381)
+++..-. .. .|+ .+.+.++.+.+ ++...+.++.+.|. ..+.-. +-+.+|+.-
T Consensus 278 ~L~~hp~V~~V~yPgl~s~p~~~~a~k~~~g~gg~~sf~l~~~~~~~~~f~~~L~l~~~a~SlGg~eSLi~~pa~~th~~ 357 (397)
T PRK07504 278 FLAGHPKVARVIYPGRADHPQADIVAKQMTGGSTLVAFELKGGKEAAFRFLNALKIVRISNNLGDAKSLITHPATTTHKN 357 (397)
T ss_pred HHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCHHHHHHHHHCCCCCEECCCCCCCCCEEECCCCCCCCC
T ss_conf 99738995579798987782788999857998524589982889999999980891522226787650323764234311
Q ss_pred ----------CCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf ----------88703999628789999999999999999
Q gi|254780486|r 347 ----------INTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 347 ----------~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
.....||+++...+.++-|+.+-.+|+.+
T Consensus 358 ~~~e~r~~~Gi~~~lvRlSVGlEd~eDLi~Dl~~AL~~i 396 (397)
T PRK07504 358 LSPEARAELGISEGFIRLSAGLEDTDDLIEDLEAALKKV 396 (397)
T ss_pred CCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHC
T ss_conf 899999866979295999960089999999999999852
No 234
>PRK05968 hypothetical protein; Provisional
Probab=99.77 E-value=7.5e-17 Score=125.19 Aligned_cols=292 Identities=20% Similarity=0.180 Sum_probs=183.7
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCC-HH--HHHH-HHHCCCCC
Q ss_conf 88722443688589999999984012888516741660245655666316897100454202-67--7526-66408764
Q gi|254780486|r 63 GSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVH-AS--IREG-INSGKAQA 138 (381)
Q Consensus 63 ~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~H-aS--i~~g-~~ls~a~~ 138 (381)
+..=||. .++....||++||.+-|.++|+.|+||..|-.+++.+++++||.|++-...- .+ +.+. ..--+.++
T Consensus 54 g~~YsR~---~NPT~~~lE~~la~LEgg~~a~~~sSGmaAis~~l~~ll~~Gd~iv~~~~~YggT~~l~~~~l~~~GI~v 130 (389)
T PRK05968 54 RPIYTRG---DNPTVRAFEEMLAKLEGAEDARGFASGMAAISSTVLSFVEPGDRIVAVRHVYPDAYRLFGTLLKRMGVEV 130 (389)
T ss_pred CCEEECC---CCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCEE
T ss_conf 9614289---8866999999999982996388854889999999999608999898588766758999998886078469
Q ss_pred EEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEH
Q ss_conf 03056881478997643100024786079714621576613468999998631360898613112223477764011000
Q gi|254780486|r 139 IAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHII 218 (381)
Q Consensus 139 ~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~ 218 (381)
..+.-+|.+.+++.+ + ++.+|.+|+.-+-.-.+.|+++++++|+++|+.++||-.-+..++ +..+
T Consensus 131 ~~vd~~d~~~~~~~i-------~-~Tklv~~EtpsNP~l~v~DI~~ia~iA~~~g~~~vVDNTfatP~~-------~~Pl 195 (389)
T PRK05968 131 DYVDGRDEEAVAKAL-------P-GAKLLYLESPTSWVFELQDIAALAALAKRHGVVTVIDNSWASPVF-------QRPI 195 (389)
T ss_pred EEECCCCHHHHHHCC-------C-CCCEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHH-------CCHH
T ss_conf 996899999999627-------6-872899978999887273899999999983995999778611642-------5842
Q ss_pred HCCCCCCCCCCCCCCCCC----EEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHH
Q ss_conf 013465210013465653----0267524510010000121100001357750257898878988627102-24789999
Q gi|254780486|r 219 EERNNVIVMHSCSKALGS----SGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLI 293 (381)
Q Consensus 219 ~~~~~~iv~~TlsKa~g~----~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~ 293 (381)
....+|++.|.+|-+++ .||.|+++++.+..++.....+ ....++|..+..++..|+.+.-+-++ .+...+++
T Consensus 196 -~~GaDivvhS~TKyi~GHsDvl~G~v~~~~~~~~~~~~~~~~~-lG~~lsP~~a~l~lRGL~TL~lRm~rh~~nA~~vA 273 (389)
T PRK05968 196 -TLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAYPY-LGGKLSPFEAWLLLRGLRTLPLRMKAHEASALLIA 273 (389)
T ss_pred -HHCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHH-CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf -4079879970453446898844269945699999999999986-27778858889998479869999999999999999
Q ss_pred HHHHHHHH-CCC---CC--------CCCCCEEEEEECCHHHHHHHHHHHH--HCCEEE----EEECCCCCC---------
Q ss_conf 99998764-179---78--------9989728999589799999999999--779189----862288888---------
Q gi|254780486|r 294 NITDKIAN-KKI---GF--------SSQSHIQSIVIGDNKSCLNIAKNLQ--KKGFDI----RAIRPPTVP--------- 346 (381)
Q Consensus 294 ~~~~~~~~-~~~---g~--------~~~s~I~~v~~gd~~~a~~~~~~L~--~~Gi~v----~~i~~PtVp--------- 346 (381)
++++..-. ... ++ .+.+.++.+.+.+...+.++.+.|. ..+.-. +-+.+|...
T Consensus 274 ~~L~~hp~V~~V~yPgL~shp~~~l~g~gg~~sf~l~~~~~~~~f~~~L~lf~~a~SlGg~eSLi~~~~~~~~~~~~~~~ 353 (389)
T PRK05968 274 RRLKAHPVVETVCHPALANHPPAGLSGTSGLFSFIFREGVDVRRFADALKLFRLGVSWGGHESLVVPAEVVLQQKAQPNS 353 (389)
T ss_pred HHHHHCCCCCEEECCCCCCCHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCHHHCCCCCCHHH
T ss_conf 99961999866338885223134217864379999577799999998488075631668643021870664167799889
Q ss_pred -----CCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf -----8870399962878999999999999999
Q gi|254780486|r 347 -----INTARLRISITLNVDEPTIVKLFDILPQ 374 (381)
Q Consensus 347 -----~~~~rlRi~v~a~~t~edi~~~~~~l~~ 374 (381)
.....||+++...+.++-|+.+-.+|+.
T Consensus 354 ~~~~Gi~~~liRlSVGlEd~eDLi~Dl~qAL~~ 386 (389)
T PRK05968 354 AARFGISPRSVRLHVGLEGTEALWADLEQALAA 386 (389)
T ss_pred HHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHH
T ss_conf 986596949699993109999999999999998
No 235
>pfam01053 Cys_Met_Meta_PP Cys/Met metabolism PLP-dependent enzyme. This family includes enzymes involved in cysteine and methionine metabolism. The following are members: Cystathionine gamma-lyase, Cystathionine gamma-synthase, Cystathionine beta-lyase, Methionine gamma-lyase, OAH/OAS sulfhydrylase, O-succinylhomoserine sulfhydrylase All of these members participate is slightly different reactions. All these enzymes use PLP (pyridoxal-5'-phosphate) as a cofactor.
Probab=99.77 E-value=6.4e-17 Score=125.64 Aligned_cols=289 Identities=22% Similarity=0.239 Sum_probs=185.3
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHH-HCCHH--HHHH-HHHCCCCCE
Q ss_conf 8722443688589999999984012888516741660245655666316897100454-20267--7526-664087640
Q gi|254780486|r 64 SGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDK-LVHAS--IREG-INSGKAQAI 139 (381)
Q Consensus 64 ~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~-~~HaS--i~~g-~~ls~a~~~ 139 (381)
..=+|. .++....||++||++-|.|.|++|+||..|-..++.+++++||.|++-. ....+ +.+. .+--+.++.
T Consensus 44 ~~Y~R~---~nPt~~~le~~la~LEg~~~a~~~~SGmaAi~~~ll~l~~~Gd~il~~~~~Yg~t~~~~~~~l~~~Gi~v~ 120 (381)
T pfam01053 44 YDYSRS---GNPTRDALEERIAALEGGEAALAFSSGMAAIFAALLALLKAGDHVVATDDLYGGTYRLFEKVLPRFGIEVT 120 (381)
T ss_pred CEEECC---CCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEE
T ss_conf 524189---88679999999999819973899358899999999755799998999578737589999998871585067
Q ss_pred EECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHH
Q ss_conf 30568814789976431000247860797146215766134689999986313608986131122234777640110000
Q gi|254780486|r 140 AIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIE 219 (381)
Q Consensus 140 ~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~ 219 (381)
.|.-+|.+++++.++. ++.+|.+|+.-+-...++||++|.++|+++|+.++||..-+..++ +..+
T Consensus 121 ~~d~~d~~~~~~~i~~-------~T~li~~EspsNP~l~v~Di~~ia~iA~~~gi~~vVDNT~atP~~-------~~Pl- 185 (381)
T pfam01053 121 FVDPSDLDALEAAIKP-------NTKAVFLETPTNPLLKVVDIEAIAKIAKKHGALVVVDNTFASPYL-------QRPL- 185 (381)
T ss_pred EECCCCHHHHHHHCCC-------CCEEEEEECCCCCCEEECCCHHHHHHHHHCCCEEEEECCCCHHHH-------CCCH-
T ss_conf 6266586789975588-------842999974899860512609999998645735998788600521-------2413-
Q ss_pred CCCCCCCCCCCCCCCCC----EEEEEEC--CCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHH
Q ss_conf 13465210013465653----0267524--510010000121100001357750257898878988627102-2478999
Q gi|254780486|r 220 ERNNVIVMHSCSKALGS----SGALVGS--NKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQL 292 (381)
Q Consensus 220 ~~~~~iv~~TlsKa~g~----~GG~i~~--~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~ 292 (381)
....+|++.+++|-+++ .||.|+. +.++++.++...+ .+...++|..+..++..++.+.-+-++ .+...++
T Consensus 186 ~~GaDivvhS~TKyi~GhsDvl~G~v~~~~~~~~~~~l~~~~~--~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~nA~~l 263 (381)
T pfam01053 186 ELGADIVVHSATKYIGGHSDVVGGVVVVNGREELAKRLRFLQN--ATGAVLSPFDAWLLLRGLKTLGLRMERHQENALKL 263 (381)
T ss_pred HCCCCEEEEECCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHH--HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_conf 3079779975343036887613059996882668999999998--61687886888998714787999999988899999
Q ss_pred HHHHHHHHH-CC---CCC-------------CCCCCEEEEEECCHHHHHHHHHHHH--HCCEEE----EEECCCCC----
Q ss_conf 999998764-17---978-------------9989728999589799999999999--779189----86228888----
Q gi|254780486|r 293 INITDKIAN-KK---IGF-------------SSQSHIQSIVIGDNKSCLNIAKNLQ--KKGFDI----RAIRPPTV---- 345 (381)
Q Consensus 293 ~~~~~~~~~-~~---~g~-------------~~~s~I~~v~~gd~~~a~~~~~~L~--~~Gi~v----~~i~~PtV---- 345 (381)
+++++.--. ++ .++ .+.+.++.+.+.+...+.++.+.|. ..|.-. +-+..|+.
T Consensus 264 A~~L~~hp~V~~V~yPgL~s~p~~~~~~r~~~g~ggl~sf~l~~~~~~~~f~d~l~lf~~~~SlGg~eSLi~~p~~~~h~ 343 (381)
T pfam01053 264 AEFLEEHPKVEKVYYPGLPSHPGHELAKKQMSGFGGMLSFELKGGEAASKFLDNLKLFSLAESLGGVESLISHPATMTHA 343 (381)
T ss_pred HHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCEECCCCCCCCCEEECCCCCCCC
T ss_conf 99997299977795758999804999997589999731898678999999998477133535658756065576413531
Q ss_pred --C--------CCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf --8--------887039996287899999999999999998
Q gi|254780486|r 346 --P--------INTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 346 --p--------~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
| .....||+++.. |+++.+++-|++.+
T Consensus 344 ~~~~~~r~~~gi~~~liRlSvGl----Ed~~DLi~DL~qAL 380 (381)
T pfam01053 344 SIPPEEREAAGITDGLIRLSVGI----EDVDDLIADLKQAL 380 (381)
T ss_pred CCCHHHHHHCCCCCCEEEEEEEE----CCHHHHHHHHHHHC
T ss_conf 18999998669793959999500----99999999999863
No 236
>PRK09028 cystathionine beta-lyase; Provisional
Probab=99.77 E-value=1.6e-16 Score=123.11 Aligned_cols=291 Identities=18% Similarity=0.161 Sum_probs=183.5
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHH-CCHH--HHHH-HHHCCCCCEEE
Q ss_conf 224436885899999999840128885167416602456556663168971004542-0267--7526-66408764030
Q gi|254780486|r 66 GSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKL-VHAS--IREG-INSGKAQAIAI 141 (381)
Q Consensus 66 ~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~-~HaS--i~~g-~~ls~a~~~~f 141 (381)
=||. .++....||++||++-|.++|++|+||..|-..++.+++++||+|++-.. ...+ +.+. ..--+..+..+
T Consensus 55 YsR~---~NPT~~~lE~~la~LEgg~~a~~~~SGmaAi~~~ll~ll~~Gdhiv~~~~~YggT~~l~~~~l~~~Gi~v~~v 131 (394)
T PRK09028 55 YGRR---GTPTHFAFQAAIAELEGGAGTALYPSGAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILAGFGIETTYY 131 (394)
T ss_pred EECC---CCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHCCEEEEEE
T ss_conf 7799---8877999999999981998779845999999999999847998787069986277999998886567479995
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCC
Q ss_conf 56881478997643100024786079714621576613468999998631360898613112223477764011000013
Q gi|254780486|r 142 PHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEER 221 (381)
Q Consensus 142 ~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~ 221 (381)
.-+|.+++++.++ +++.+|.+|+.-+-.-++.||++|.++|+++|+.++||-.-+..++ +..+ ..
T Consensus 132 d~~~~~~~~~~i~-------~~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~-------~~Pl-~~ 196 (394)
T PRK09028 132 DPMIGEGIRELIR-------PNTKVLFLESPGSITMEVQDVPTLSRIAHEHDIVVMLDNTWASPIN-------SRPF-EM 196 (394)
T ss_pred CCCCHHHHHHHCC-------CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCHHC-------CCCH-HC
T ss_conf 7999899985368-------7726999955899875236899999999983987996376431220-------6821-20
Q ss_pred CCCCCCCCCCCCCCC----EEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHH
Q ss_conf 465210013465653----0267524510010000121100001357750257898878988627102-24789999999
Q gi|254780486|r 222 NNVIVMHSCSKALGS----SGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINIT 296 (381)
Q Consensus 222 ~~~iv~~TlsKa~g~----~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~ 296 (381)
..+|++.|.+|-+++ .||.+.++++..+.++.... .+...++|..+..++..|+.+.-+-++ .+...++++++
T Consensus 197 GaDivvhS~TKyi~GHsDv~~G~v~~~~~~~~~l~~~~~--~~G~~~sP~~a~L~lRGL~TL~lRm~r~~~nA~~vA~~L 274 (394)
T PRK09028 197 GVDISIQAATKYIVGHSDVMLGTATANEKHWDQLREQSY--LMGQCTSPDDVYLAARGLRTLGVRLAQHEKNALKVANWL 274 (394)
T ss_pred CCCEEEEECCCEECCCCCCCCEEEECCHHHHHHHHHHHH--HHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 798899827701048877403167468899999999998--716778878999998367859999999999999999998
Q ss_pred HHHHH-CC---CCC-------------CCCCCEEEEEE--CCHHHHHHHHHHHHHCCEEE------EEECCCCCC-----
Q ss_conf 98764-17---978-------------99897289995--89799999999999779189------862288888-----
Q gi|254780486|r 297 DKIAN-KK---IGF-------------SSQSHIQSIVI--GDNKSCLNIAKNLQKKGFDI------RAIRPPTVP----- 346 (381)
Q Consensus 297 ~~~~~-~~---~g~-------------~~~s~I~~v~~--gd~~~a~~~~~~L~~~Gi~v------~~i~~PtVp----- 346 (381)
+.--. .. .|+ .+.+.++.+.+ |+.+.+..+.+.|.--.+-+ +-+..|...
T Consensus 275 ~~hp~V~~V~yPgL~shp~h~la~r~~~g~gg~~sf~l~~g~~~~~~~f~~~L~lf~~a~SlGg~eSLi~~p~~~~~~~~ 354 (394)
T PRK09028 275 ATRPEVDHLRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTALVEGMQHFKMGFSWGGFESLILGPFGINKLRT 354 (394)
T ss_pred HCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCCCCHHH
T ss_conf 60999878988899889448999986779986999998169999999999848827571168987540788887674223
Q ss_pred -----CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf -----8870399962878999999999999999988738
Q gi|254780486|r 347 -----INTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 347 -----~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
.....||+++...+ ++.+++-|++.++.++
T Consensus 355 ~~~~~~~~~lvRlSVGlEd----~eDLi~DL~qAL~k~~ 389 (394)
T PRK09028 355 ATNWDFSKPLIRLHIGLED----VDDLIADLEAGFERYN 389 (394)
T ss_pred HHCCCCCCCEEEEEECCCC----HHHHHHHHHHHHHHHH
T ss_conf 2035899997999941099----8999999999999855
No 237
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.77 E-value=2.8e-15 Score=115.34 Aligned_cols=321 Identities=14% Similarity=0.133 Sum_probs=193.9
Q ss_pred CCCCC----CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC--HHHHHHHHHHHHHCCCC--CEEEECCCCHHHHHHHHH-
Q ss_conf 56677----9889999999999863786887224436885--89999999984012888--516741660245655666-
Q gi|254780486|r 39 YLALS----SSTLLREKILSSLDSKIPIGSGGSRLLCGNY--NQHLELEEEAADFFGFE--KMLYFGSGYAANMAILST- 109 (381)
Q Consensus 39 YLGl~----~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~--~~~~~lE~~lA~~~g~e--~al~~~sG~~An~~~i~~- 109 (381)
||.-+ -+|++.++....+...|| ..+|-.-.|.. ...++..+.+|+++|.+ +-++++.|+.+|-.+|..
T Consensus 4 YlD~~ATTp~~~~v~~~m~~~~~~~fg--NPsS~H~~G~~A~~~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~ 81 (386)
T COG1104 4 YLDNAATTPVDPEVLEAMLPYLTEVFG--NPSSLHSFGREARKAVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGA 81 (386)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHH
T ss_conf 555435688989999999999875318--961155757999999999999999983999780899569847777999864
Q ss_pred -HCC----CCCCCCHHHHCCHHHHHHHHHC---CCCCEEEC--C---CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC
Q ss_conf -316----8971004542026775266640---87640305--6---881478997643100024786079714621576
Q gi|254780486|r 110 -LPQ----ATDLIVYDKLVHASIREGINSG---KAQAIAIP--H---NNINSFAENINKWRKSGGKGFPWIVVESIYSMD 176 (381)
Q Consensus 110 -l~~----~~d~ii~D~~~HaSi~~g~~ls---~a~~~~f~--H---nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~ 176 (381)
.+. ++.+||.-+-=|.|+.+.++-. +-.+...+ . -|+++|++.|+ +.+++|.+=-+.+..
T Consensus 82 ~~a~~~~~~~~HIIts~iEH~aVl~~~~~Le~~g~~Vtyl~v~~~G~v~~e~L~~al~-------~~T~LVSim~aNnE~ 154 (386)
T COG1104 82 ALAYRNAQKGKHIITSAIEHPAVLNTCRYLERQGFEVTYLPVDSNGLVDLEQLEEALR-------PDTILVSIMHANNET 154 (386)
T ss_pred HHHHHCCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCEECHHHHHHHCC-------CCCEEEEEEECCCCE
T ss_conf 8764235689858875543499999999998669757996888897287999998638-------884599998502682
Q ss_pred CCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCC--CCCCCCCCCCCCCCCEE-EEEECCCCCC-CCCC
Q ss_conf 613468999998631360898613112223477764011000013--46521001346565302-6752451001-0000
Q gi|254780486|r 177 GDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEER--NNVIVMHSCSKALGSSG-ALVGSNKIIY-DYLI 252 (381)
Q Consensus 177 G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~--~~~iv~~TlsKa~g~~G-G~i~~~~~ii-~~l~ 252 (381)
|.+-|+++|.++|+++++++.+|-+|++|-+ . .+.. ..++++-|=-|-.|.-| |++.-++.+. +.+.
T Consensus 155 G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gki-------p--i~~~~~~vD~ls~SaHK~~GpkGiGaLyv~~~~~~~p~i 225 (386)
T COG1104 155 GTIQPIAEIGEICKERGILFHVDAVQAVGKI-------P--IDLEELGVDLLSFSAHKFGGPKGIGALYVRPGVRLEPLI 225 (386)
T ss_pred EECCCHHHHHHHHHHCCCEEEEEHHHHCCCE-------E--CCCCCCCCCEEEEEHHHCCCCCCEEEEEECCCCCCCCEE
T ss_conf 0112099999999975981797613325760-------0--460215765687311213699842799987998737446
Q ss_pred CCCCCEE---CCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHCC-CC--C-----CCCCCEEEEEECCH
Q ss_conf 1211000---01357750257898878988627-102247899999999876417-97--8-----99897289995897
Q gi|254780486|r 253 NYAKPFI---YTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANKK-IG--F-----SSQSHIQSIVIGDN 320 (381)
Q Consensus 253 ~~~~~~i---fst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~~-~g--~-----~~~s~I~~v~~gd~ 320 (381)
++.+.- =|+..+.+.+++-.+|+++..++ +...+++..+...+.+..... .. + ....++..+-++.
T Consensus 226 -~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~~~~p~~~~~g~~~~rlP~~~~~~f~g- 303 (386)
T COG1104 226 -HGGGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLLEIIPDVYLNGDDEPRLPNILNFSFPG- 303 (386)
T ss_pred -ECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEECC-
T ss_conf -047678997888755799999999999999877888999999999999999850996898688545789868999689-
Q ss_pred HHHHHHHHHHHHCCEEEEEEC----C---C-----C--C--CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 999999999997791898622----8---8-----8--8--8887039996287899999999999999998873
Q gi|254780486|r 321 KSCLNIAKNLQKKGFDIRAIR----P---P-----T--V--PINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 321 ~~a~~~~~~L~~~Gi~v~~i~----~---P-----t--V--p~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
.....+.-.|-.+||+++.-. . | + + ..-.+-|||+++...|+||++++++++.++++.+
T Consensus 304 v~gE~ll~~L~~~gI~vStGSACsS~~~~pShVL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~~~i~~l 378 (386)
T COG1104 304 VEGESLLLALDLAGIAVSTGSACSSGSLEPSHVLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALKEIIKRL 378 (386)
T ss_pred CCHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHHHHCCCCHHHHCCCEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 757899986104086873364345899871499998099968837248997379998999999999999999998
No 238
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.76 E-value=1.1e-15 Score=117.86 Aligned_cols=315 Identities=18% Similarity=0.241 Sum_probs=202.6
Q ss_pred HHHHHHHHHHHHHCCCCCCC------CCCC-CCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCH
Q ss_conf 99999999998637868872------2443-6885899999999840128885167416602456556663168971004
Q gi|254780486|r 47 LLREKILSSLDSKIPIGSGG------SRLL-CGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVY 119 (381)
Q Consensus 47 ~v~~a~~~a~~~~~g~~~~~------sr~~-~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~ 119 (381)
-+.+++.+++. .||-|.+- -|+- --..+++.=+|+ ||+|+|.+.+-+.+..-.+-.+++.++++++|.|+.
T Consensus 28 iLt~eArkal~-E~gDGYSvCD~C~~Grldei~kPpI~~F~~d-laeFlg~D~~R~t~GARe~KfavMhal~~~gd~vV~ 105 (382)
T COG1103 28 ILTEEARKALL-EWGDGYSVCDFCLEGRLDEITKPPIKDFLED-LAEFLGMDEVRVTAGAREAKFAVMHALCKEGDWVVV 105 (382)
T ss_pred CCCHHHHHHHH-HHCCCCCHHHHHCCCCCCCCCCCCHHHHHHH-HHHHHCCCEEEECCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf 68799999999-8648863443104574110258858889998-898719863442365125679999975158988997
Q ss_pred HHHCCHHHHHHHHHCCCCCEEECCC-------CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 5420267752666408764030568-------814789976431000247860797146215766134689999986313
Q gi|254780486|r 120 DKLVHASIREGINSGKAQAIAIPHN-------NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDY 192 (381)
Q Consensus 120 D~~~HaSi~~g~~ls~a~~~~f~Hn-------D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y 192 (381)
|.++|-+-+.++..++.++.-++|. +++.-.+.+.+.....++...+.+.--+-+-.|.+++-+++.++|++|
T Consensus 106 D~~aHYttyvAAEragl~v~eVp~tg~Pey~i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~ 185 (382)
T COG1103 106 DSLAHYTTYVAAERAGLNVAEVPNTGYPEYKITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREY 185 (382)
T ss_pred CCCCHHHHHHHHHHCCCEEEECCCCCCCCEEECHHHHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHC
T ss_conf 47422788999986397589667899984576688889999999862489844899963577757722167899999872
Q ss_pred CEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE--EEEECCCCCCCCC-CCCCCCE-------ECCC
Q ss_conf 6089861311222347776401100001346521001346565302--6752451001000-0121100-------0013
Q gi|254780486|r 193 DGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG--ALVGSNKIIYDYL-INYAKPF-------IYTT 262 (381)
Q Consensus 193 ~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G--G~i~~~~~ii~~l-~~~~~~~-------ifst 262 (381)
|+-|++.-|+..|.+--.|+ ....+++++|=.|++++.| |.++.+.++.+.+ |..++.| ...|
T Consensus 186 gvPlllN~AYt~Grmpvs~k-------e~g~DFiVgSGHKsmAAs~PiGvl~~~eE~ae~V~r~Sg~~~~~KEvellGCT 258 (382)
T COG1103 186 GVPLLLNCAYTVGRMPVSGK-------EIGADFIVGSGHKSMAASAPIGVLAMSEEWAEIVLRRSGRAFPKKEVELLGCT 258 (382)
T ss_pred CCCEEEECCEEECCCCCCCC-------CCCCCEEEECCCCCHHCCCCEEEEEEHHHHHHHHHHHCCCCCCCCEEEEECCC
T ss_conf 99568512102232113665-------56787797248530011487047751367778998631544653325661432
Q ss_pred C-CCCCHHHHHHHHHHHHHHC----CCHHHHHHHHHHHHHHHH-HCCCCCCCCCC-EEEEEEC--------CHHHHHHHH
Q ss_conf 5-7750257898878988627----102247899999999876-41797899897-2899958--------979999999
Q gi|254780486|r 263 S-PSPILAVVACEALKLIKRK----PALHKSLLQLINITDKIA-NKKIGFSSQSH-IQSIVIG--------DNKSCLNIA 327 (381)
Q Consensus 263 ~-l~P~~~aaa~aal~~l~~~----~~~~~~l~~~~~~~~~~~-~~~~g~~~~s~-I~~v~~g--------d~~~a~~~~ 327 (381)
+ ..| .....+++.++.+. ++-.++.+..+...+++. ...+|..+..+ .+.+..+ ...+-.-+.
T Consensus 259 ~rGap--ivTlmASfP~V~eRVkrWdeEv~kaR~fv~elEkigg~~qlG~rPk~HdLm~Fetp~f~eIakk~~r~gyFlY 336 (382)
T COG1103 259 VRGAP--IVTLMASFPHVVERVKRWDEEVEKARWFVAELEKIGGVKQLGERPKNHDLMKFETPVFHEIAKKHKRKGYFLY 336 (382)
T ss_pred CCCCH--HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHCCCCCEEEH
T ss_conf 46843--8998740779999998788999999999999997430887177976564255337128999875767854668
Q ss_pred HHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9999779189862288888887039996287899999999999999998873
Q gi|254780486|r 328 KNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 328 ~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
++|.+|||.- |++ -.+..+.+++ ...++||++..++++++++.+.
T Consensus 337 ~ELK~RgI~G--I~~----G~Tk~~K~sv-yGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 337 EELKKRGIHG--IQP----GQTKYFKLSV-YGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred HHHHHCCCCC--CCC----CCEEEEEEEE-ECCCHHHHHHHHHHHHHHHHHC
T ss_conf 9887658665--066----7513788875-0577999999999999999861
No 239
>PRK08114 cystathionine beta-lyase; Provisional
Probab=99.76 E-value=3.6e-16 Score=120.92 Aligned_cols=290 Identities=15% Similarity=0.138 Sum_probs=179.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHH---HH-HHHCCCCCEEE
Q ss_conf 224436885899999999840128885167416602456556663168971004542026775---26-66408764030
Q gi|254780486|r 66 GSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIR---EG-INSGKAQAIAI 141 (381)
Q Consensus 66 ~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~---~g-~~ls~a~~~~f 141 (381)
=||. | ++....||+++|++-|.|+|++|+||..|-..++.+++++||.|++-...-.+.. +- ..--+.++..|
T Consensus 56 YsR~--~-NPT~~~lE~~la~LEg~~~a~~fsSGmaAis~~ll~ll~~Gd~il~~~~~YggT~~l~~~~l~~~Gi~v~~~ 132 (395)
T PRK08114 56 YGRR--G-TLTHFSLQEAMCELEGGAGCALYPCGAAAVANSILAFVEQGDHVLMTGTAYEPSQDFCSKILSKLGVTTTWF 132 (395)
T ss_pred EECC--C-CHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEEE
T ss_conf 7789--8-876999999999970997379826889999999999708999899768885689999999998759569985
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCC--EEEEECCCCCCCCCCCCCCEEEEEHH
Q ss_conf 5688147899764310002478607971462157661346899999863136--08986131122234777640110000
Q gi|254780486|r 142 PHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYD--GFIVVDEAHATGVCGPLGKGLTHIIE 219 (381)
Q Consensus 142 ~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~--~~LivDEah~~Gv~G~~G~G~~~~~~ 219 (381)
...|.+++++.++ +++.+|.+|+.-+=.-.++|+++|+++|+++| ++++||-.-+..++ +..+
T Consensus 133 d~~d~~~~~~~i~-------~~Tklv~~EspsNP~l~v~Di~~i~~~a~~~~~~~~~vvDNTfatP~~-------~~Pl- 197 (395)
T PRK08114 133 DPLIGADIAKLIQ-------PNTKVVFLESPGSITMEVHDIPAIVAAVRSVAPDAVIMIDNTWAAGVL-------FKAL- 197 (395)
T ss_pred CCCCHHHHHHHCC-------CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCCCCCCCC-------CCCC-
T ss_conf 7999999997468-------775499994489866522679999999986056868997188788765-------5444-
Q ss_pred CCCCCCCCCCCCCCCCC----EEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHH
Q ss_conf 13465210013465653----0267524510010000121100001357750257898878988627102-247899999
Q gi|254780486|r 220 ERNNVIVMHSCSKALGS----SGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLIN 294 (381)
Q Consensus 220 ~~~~~iv~~TlsKa~g~----~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~ 294 (381)
....+|++.|.+|-+++ .||.+++++++.+.++... +.....++|..+.-.+..|+.+.-+-++ .+...+.++
T Consensus 198 ~~GaDivihS~TKyl~GHsDv~~G~v~~~~~~~~~l~~~~--~~~G~~~~p~~a~Ll~RGL~TL~lRm~~~~~nA~~vA~ 275 (395)
T PRK08114 198 DFGIDISIQAGTKYLIGHSDAMIGTAVANARCWEQLRENS--YLMGQMVDADTAYMTSRGLRTLGVRLKQHQESSLKVAE 275 (395)
T ss_pred CCCCEEEEEECCCEECCCCCCEEEEEECCHHHHHHHHHHH--HHHCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
T ss_conf 6667499996665005778852478852788999999999--97378799799999975676388999999999999999
Q ss_pred HHHHHHH-CC---CCC-------------CCCCCEEEEEECC---HHHHHHHHHHHH--HCCEEE----EEECCCC--C-
Q ss_conf 9998764-17---978-------------9989728999589---799999999999--779189----8622888--8-
Q gi|254780486|r 295 ITDKIAN-KK---IGF-------------SSQSHIQSIVIGD---NKSCLNIAKNLQ--KKGFDI----RAIRPPT--V- 345 (381)
Q Consensus 295 ~~~~~~~-~~---~g~-------------~~~s~I~~v~~gd---~~~a~~~~~~L~--~~Gi~v----~~i~~Pt--V- 345 (381)
+++..-. .. .++ .+.+.++.+.+.+ .+.+.++.+.|. ..+.-. +-+.+|. .
T Consensus 276 ~L~~hp~V~~V~yPgL~shp~h~la~~~~~g~gg~~sf~l~~~~~~~~~~~fl~~l~lf~~a~SlGg~eSLi~~~~~~~~ 355 (395)
T PRK08114 276 WLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKLTDEELANYLDNFSLFSMAYSWGGFESLILANQPEEI 355 (395)
T ss_pred HHHCCCCCCEEECCCCCCCHHHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCHHH
T ss_conf 99639997589899998984389999757898779999985777999999999808926582051763402217985444
Q ss_pred ----C-----CCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf ----8-----88703999628789999999999999999
Q gi|254780486|r 346 ----P-----INTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 346 ----p-----~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
| .....||+++...+.++-|+.+-.+|+++
T Consensus 356 ~~~~~~~~~~i~~~liRlSvGlEd~eDLi~DL~qAL~~i 394 (395)
T PRK08114 356 AAIRPAGEVDFTGTLIRLHIGLEDVDDLIADLAAGFARI 394 (395)
T ss_pred HCCCCHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 436803443999797999942399899999999999833
No 240
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=99.76 E-value=2.4e-16 Score=122.02 Aligned_cols=286 Identities=15% Similarity=0.151 Sum_probs=183.2
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCC-HH--HHHH-HHHCCCCCEEECCCCHHHH
Q ss_conf 589999999984012888516741660245655666316897100454202-67--7526-6640876403056881478
Q gi|254780486|r 74 YNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVH-AS--IREG-INSGKAQAIAIPHNNINSF 149 (381)
Q Consensus 74 ~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~H-aS--i~~g-~~ls~a~~~~f~HnD~~~L 149 (381)
++..+.||++||++-|.++|++|+||..|-..++.++.+++|+|++-...- .+ +... ..--+.++..|.-+|.+.+
T Consensus 52 nPT~~~le~~la~LEg~~~a~~~~SGmaAis~~~l~ll~~Gd~iv~~~~~Yg~T~~l~~~~l~~~gi~~~~~d~~d~~~~ 131 (388)
T PRK08861 52 NPNRGLLEQALSELESGKGAVVTNCGTSALNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVLFVDQSDAAAL 131 (388)
T ss_pred CHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCCCHHH
T ss_conf 86599999999998499837996378999999999836899989986898550689999898628869999899982789
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCC
Q ss_conf 99764310002478607971462157661346899999863136089861311222347776401100001346521001
Q gi|254780486|r 150 AENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHS 229 (381)
Q Consensus 150 e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~T 229 (381)
++.++. ...+|.+|++-+-.-.++|+++|+++|+++|++++||-.-+..++ +..+ ....+|++.|
T Consensus 132 ~~~i~~-------~Tkli~~EspsNP~l~v~Di~~i~~~A~~~g~~~vvDNT~atP~~-------~~Pl-~~GaDivvhS 196 (388)
T PRK08861 132 DAALAK-------KPKLILLETPSNPLVRVVDIAEVCQKAKQVGALVAVDNTFLTPVL-------QKPL-ELGADFVIHS 196 (388)
T ss_pred HHHCCC-------CCEEEEEECCCCCCCEEECCHHHHHHHHHCCCEEEEECCCCHHHH-------CCCH-HCCCCEEEEE
T ss_conf 973487-------853999844899983665659999999873995999788512530-------3721-0388789996
Q ss_pred CCCCCCC----EEEEEEC-CCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHH-C
Q ss_conf 3465653----0267524-510010000121100001357750257898878988627102-2478999999998764-1
Q gi|254780486|r 230 CSKALGS----SGALVGS-NKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINITDKIAN-K 302 (381)
Q Consensus 230 lsKa~g~----~GG~i~~-~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~~~~~-~ 302 (381)
.+|-+++ .||.|++ ++++.+.++.... .+...++|..+..++..|+.+.-+-++ .+...+++++++.--. .
T Consensus 197 ~TKyi~GHsDvlgG~vv~~~~~~~~~l~~~~~--~~G~~~sP~~a~l~~RGL~TL~lRm~~~~~nA~~lA~~L~~hp~V~ 274 (388)
T PRK08861 197 TTKYINGHSDVIGGVLITKTKEHAEELAWWGN--CIGATGTPFDSYMTLRGIRTLGARMRVHEESAQEILKYLQTQSLVG 274 (388)
T ss_pred CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHH--HCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 24012588875021895074888899999998--5177788677788854789788999999986999999998499927
Q ss_pred C---CCC-------------CCCCCEEEEEEC-CHHHHHHHHHHHH--HCCEEE----EEECCCCCC-------------
Q ss_conf 7---978-------------998972899958-9799999999999--779189----862288888-------------
Q gi|254780486|r 303 K---IGF-------------SSQSHIQSIVIG-DNKSCLNIAKNLQ--KKGFDI----RAIRPPTVP------------- 346 (381)
Q Consensus 303 ~---~g~-------------~~~s~I~~v~~g-d~~~a~~~~~~L~--~~Gi~v----~~i~~PtVp------------- 346 (381)
. .++ .+-+.++.+.+. +.+.+..+.+.|. ..++-. +-+.+|+.-
T Consensus 275 ~V~yPgL~shp~h~lak~~~~g~ggm~sf~l~~~~~~~~~f~~~l~lf~~a~SlGg~eSLi~~p~s~sh~~~~~~~~~~~ 354 (388)
T PRK08861 275 TIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLKVFVKALKLFSLAESLGGVESLICHPASMTHRAMGEEALAEA 354 (388)
T ss_pred EEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHC
T ss_conf 89898999992699998645698626999977989999999983880533116687750213775455411899999866
Q ss_pred -CCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf -887039996287899999999999999998
Q gi|254780486|r 347 -INTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 347 -~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
.....||+++...+.++-|+.+-.+|++..
T Consensus 355 gi~~~liRlsVGlEd~eDLi~Dl~qAL~~a~ 385 (388)
T PRK08861 355 GVSQQLLRLSVGLEDAQDLIADLKQAFAKAA 385 (388)
T ss_pred CCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 9894969999421999999999999999987
No 241
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=99.75 E-value=4.8e-16 Score=120.15 Aligned_cols=288 Identities=16% Similarity=0.187 Sum_probs=180.0
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHH---HHHH-HHHCCCCCEEE
Q ss_conf 2244368858999999998401288851674166024565566631689710045420267---7526-66408764030
Q gi|254780486|r 66 GSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHAS---IREG-INSGKAQAIAI 141 (381)
Q Consensus 66 ~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaS---i~~g-~~ls~a~~~~f 141 (381)
=||. | ++....||++||++-|.|+|++|+||..|-.+++.+++++||+|++-...-.. +.+- ..--+.++..+
T Consensus 52 YsR~--~-nPT~~~le~~la~LEg~~~a~~~sSGmaAi~~~l~~ll~~Gd~iv~~~~~YggT~~l~~~~l~~~Gi~~~~v 128 (386)
T PRK07811 52 YART--G-NPTRTALEEQLAALEGGKYGRAFSSGMAATDCLLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPV 128 (386)
T ss_pred CCCC--C-CHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEE
T ss_conf 5399--8-867999999999984998789833399999999999838999899378765219999999987358049977
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCC
Q ss_conf 56881478997643100024786079714621576613468999998631360898613112223477764011000013
Q gi|254780486|r 142 PHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEER 221 (381)
Q Consensus 142 ~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~ 221 (381)
..+|++.+++.++ +++.+|.+|+.-+-...+.|+++|.++|+++|+.++||-.-+..++ +..+ ..
T Consensus 129 d~~d~~~~~~~i~-------~~Tkli~~Esp~NP~l~v~Di~~i~~ia~~~g~~~vVDNT~atP~~-------~~Pl-~~ 193 (386)
T PRK07811 129 DLSDLDAVRAAIT-------PRTKLIWVETPTNPLLSITDIAAIAELAHDAGAKVVVDNTFASPYL-------QQPL-AL 193 (386)
T ss_pred CCCCHHHHHHHCC-------CCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCE-------ECHH-HH
T ss_conf 8878788986558-------8834999977999876405858999999855781883167335204-------2523-40
Q ss_pred CCCCCCCCCCCCCCC----EEEEEE-CCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHH
Q ss_conf 465210013465653----026752-4510010000121100001357750257898878988627102-2478999999
Q gi|254780486|r 222 NNVIVMHSCSKALGS----SGALVG-SNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINI 295 (381)
Q Consensus 222 ~~~iv~~TlsKa~g~----~GG~i~-~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~ 295 (381)
..+|++.|.+|-+++ .||.|+ .++++.+.++.... .....++|..+..++..|+.|.-+-++ .+...+++++
T Consensus 194 GaDiVvhS~TKyl~GHsDvl~G~vv~~~~~~~~~~~~~~~--~~G~~~sP~~a~l~lrGL~TL~lRm~~~~~nA~~lA~~ 271 (386)
T PRK07811 194 GADVVLHSTTKYIGGHSDVVGGALVTNDEELDEEFAFLQN--GAGAVPGPFDAYLTMRGLKTLAVRMDRHSENAEAVAEF 271 (386)
T ss_pred CCCEEEEECCCEECCCCCCEEEEEEECCHHHHHHHHHHHH--HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7987997344400578772424786082899999999997--42787885788899865736999999999999999999
Q ss_pred HHHHHH-CC---CCC-------------CCCCCEEEEEEC-CHHHHHHHHHHHH--HCCEEE----EEECCCCCC-----
Q ss_conf 998764-17---978-------------998972899958-9799999999999--779189----862288888-----
Q gi|254780486|r 296 TDKIAN-KK---IGF-------------SSQSHIQSIVIG-DNKSCLNIAKNLQ--KKGFDI----RAIRPPTVP----- 346 (381)
Q Consensus 296 ~~~~~~-~~---~g~-------------~~~s~I~~v~~g-d~~~a~~~~~~L~--~~Gi~v----~~i~~PtVp----- 346 (381)
++..-. .. .|+ .+.+.++.+.+. +...+.++.+.|. ..+.-. +-+..|+..
T Consensus 272 L~~hp~V~~V~yPgL~s~p~h~la~~~~~g~Gg~~sf~l~g~~~~~~~f~~~L~lf~~a~SlGg~eSLi~~pa~~th~~~ 351 (386)
T PRK07811 272 LDGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLRGGEEAARDFCARTKVFTLAESLGGVESLIEHPSAMTHAST 351 (386)
T ss_pred HHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCHHEECCCCCCCCCC
T ss_conf 97299837798999999937899998679998634899628699999999708916265787755230048754663115
Q ss_pred ------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf ------8870399962878999999999999999988
Q gi|254780486|r 347 ------INTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 347 ------~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
.....||+++...+ ++.+++-|++.++
T Consensus 352 ~~~~~~i~~~liRlSVGlEd----~~DLi~Dl~qAL~ 384 (386)
T PRK07811 352 AGSQLEVPDDLVRLSVGIED----VADLLADLEQALG 384 (386)
T ss_pred CHHHCCCCCCEEEEEEEECC----HHHHHHHHHHHHH
T ss_conf 97763999496999760089----9999999999982
No 242
>PRK06460 hypothetical protein; Provisional
Probab=99.75 E-value=2.3e-16 Score=122.19 Aligned_cols=283 Identities=19% Similarity=0.229 Sum_probs=178.1
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHH---HHHH-HHHCCCCCEEECCCCHHHH
Q ss_conf 58999999998401288851674166024565566631689710045420267---7526-6640876403056881478
Q gi|254780486|r 74 YNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHAS---IREG-INSGKAQAIAIPHNNINSF 149 (381)
Q Consensus 74 ~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaS---i~~g-~~ls~a~~~~f~HnD~~~L 149 (381)
++....||++||++-|.|.|++|+||..|-.+++.+++++||+|++-...-.. +... .+--+..+..+.-+|.+.+
T Consensus 44 nPT~~~le~~la~LEg~~~a~~~~SGmaAi~~~l~~~l~~Gdhiv~~~~~Yg~t~~l~~~~l~~~Gv~v~~~d~~~~~~~ 123 (375)
T PRK06460 44 NPTVLKLAEKIAELEEAEMGVAFSSGMGAISTTLLTLLKPGSSVLIHRDMFGRSYRFFTDFLRNWGVKVEVARPGEENIL 123 (375)
T ss_pred CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCEEEEEECCCCHHHH
T ss_conf 87799999999998199808995359999999999972899989971787586799999998737867797389999999
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCC
Q ss_conf 99764310002478607971462157661346899999863136089861311222347776401100001346521001
Q gi|254780486|r 150 AENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHS 229 (381)
Q Consensus 150 e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~T 229 (381)
++.++ +++.+|.+|+.-+-.-.++||++|+++|+++|+.++||..-+..++ +..+ ....+|++.+
T Consensus 124 ~~~~~-------~~Tklv~~EspsNP~l~v~Di~~i~~ia~~~gi~~vVDNT~atP~~-------~~Pl-~~GaDivvhS 188 (375)
T PRK06460 124 EKIKN-------KRYDVVFVETISNPLLRVIDIPELSKACKENGALLIVDSTFATPIN-------QKPL-VQGADIVIHS 188 (375)
T ss_pred HHHCC-------CCCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCC-------CCHH-HHCCCEEEEE
T ss_conf 97347-------6760899988999876405858999999874993897567414122-------8814-5179889995
Q ss_pred CCCCCCC----EEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHH-CC
Q ss_conf 3465653----0267524510010000121100001357750257898878988627102-2478999999998764-17
Q gi|254780486|r 230 CSKALGS----SGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINITDKIAN-KK 303 (381)
Q Consensus 230 lsKa~g~----~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~~~~~-~~ 303 (381)
++|-+++ .||.+++++++++.++...+ .+...++|..+..++..++.+.-+-++ .+...+++++++..-. ..
T Consensus 189 ~TKyi~GhsD~l~Gvv~~~~~~~~~l~~~~~--~~G~~lsP~~a~l~~rGl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~ 266 (375)
T PRK06460 189 ASKFIAGHNDVIAGLAAGSYELMKKIDLMRR--TLGTSLDPHAAYLTIRGIKTLKIRMDVINSNAQKIAEFLQEHPKVSK 266 (375)
T ss_pred CCCCCCCCCCEEEEEECCCHHHHHHHHHHHH--HCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 5643467887340342481999999999986--42787881668888636998999999999999999999974898177
Q ss_pred ---CCC-------------CCCCCEEEEEE-CCHHHHHHHHHHHH--HCCEEE----EEECCCCCC--------------
Q ss_conf ---978-------------99897289995-89799999999999--779189----862288888--------------
Q gi|254780486|r 304 ---IGF-------------SSQSHIQSIVI-GDNKSCLNIAKNLQ--KKGFDI----RAIRPPTVP-------------- 346 (381)
Q Consensus 304 ---~g~-------------~~~s~I~~v~~-gd~~~a~~~~~~L~--~~Gi~v----~~i~~PtVp-------------- 346 (381)
.++ .+.+.++.+.+ ++...+.++.+.|. ..++-. +-+.+|+.-
T Consensus 267 V~yPgl~s~p~h~lakk~~~g~ggl~sf~l~~~~~~~~~f~~~L~lf~~a~SlGg~eSLi~~p~~~sh~~~~~e~~~~~G 346 (375)
T PRK06460 267 VYYPGLKSHPDYGIARRVLKGYGGVVSFEIKGSQNDALKLMKRLSVILPAQTLGGVNSTISHPATMSHRTLTPEERKILG 346 (375)
T ss_pred EECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHCCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCC
T ss_conf 98989999947999998569997426999708999999999828826343167876301127542455318999999659
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8870399962878999999999999999988
Q gi|254780486|r 347 INTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 347 ~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
.....||+++...+ .+.+++-|++.++
T Consensus 347 i~~~liRlSvGlEd----~eDLi~DL~~AL~ 373 (375)
T PRK06460 347 ITDSMLRLSVGIED----VEDLIEDLDRALS 373 (375)
T ss_pred CCCCEEEEEECCCC----HHHHHHHHHHHHH
T ss_conf 79396999942199----9999999999983
No 243
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.75 E-value=4.9e-15 Score=113.86 Aligned_cols=326 Identities=15% Similarity=0.137 Sum_probs=161.5
Q ss_pred CCCCEEEECCCCCCCCCCCC-H----HHHHHHHHHHHHHCCC-----CCCCCCCCCCCCHHHHHHHHHHHHHCC----CC
Q ss_conf 28976898034465667798-8----9999999999863786-----887224436885899999999840128----88
Q gi|254780486|r 26 LRRQDIWDFTSHDYLALSSS-T----LLREKILSSLDSKIPI-----GSGGSRLLCGNYNQHLELEEEAADFFG----FE 91 (381)
Q Consensus 26 ~~~~~~l~f~s~dYLGl~~~-p----~v~~a~~~a~~~~~g~-----~~~~sr~~~G~~~~~~~lE~~lA~~~g----~e 91 (381)
....++|+|+. |+-.+ | .+++++.+++. .-+. +.+.+ .|..++-+++-+.+.+.+| .|
T Consensus 27 ~~~P~vIsl~~----G~P~~~p~~~~~~~~a~~~~l~-~~~~~~~~~qY~~~---~G~~eLReaIA~~~~~~~g~~~~pd 98 (416)
T PRK09440 27 LRTPGAIMLGG----GNPAHIPEMEDYFRDLLAELLA-SGKLTEALGNYDGP---QGKDELIEALAALLNERYGWNISPE 98 (416)
T ss_pred HCCCCEEEECC----CCCCCCCCCHHHHHHHHHHHHH-CCCCCCCCCCCCCC---CCCHHHHHHHHHHHHHHHCCCCCHH
T ss_conf 38998488179----6898889822999999999984-68666544788999---8709999999999999848999830
Q ss_pred CEEEECCCC-HHHHHHHHHHCCCCCC------CCH-HHHCCHHHHHHHHHCCCC-------CEEECCC----CHHHHHHH
Q ss_conf 516741660-2456556663168971------004-542026775266640876-------4030568----81478997
Q gi|254780486|r 92 KMLYFGSGY-AANMAILSTLPQATDL------IVY-DKLVHASIREGINSGKAQ-------AIAIPHN----NINSFAEN 152 (381)
Q Consensus 92 ~al~~~sG~-~An~~~i~~l~~~~d~------ii~-D~~~HaSi~~g~~ls~a~-------~~~f~Hn----D~~~Le~~ 152 (381)
. ++..+|. +|-..++.+++.++|. ++. +-.... +.++.+.... +.....+ ++ ++++.
T Consensus 99 ~-I~vT~Gaqqal~l~~~~l~~pgd~~~~~~vl~p~~P~Y~~--Y~~~~l~~~~~~~~~p~i~~~~~~~~~~~~-d~~~l 174 (416)
T PRK09440 99 N-IALTNGSQSAFFYLFNLFAGRRADGSLKKILLPLAPEYIG--YADAGLEEDLFVSARPNIELLPEGQFKYHV-DFEHL 174 (416)
T ss_pred H-EEECCCHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCC--HHHHHHHHCCCEECCCEEEECCCCCCCCCC-CHHHH
T ss_conf 0-9984878999999999964767887764389726986544--477775006500005605766875656788-98997
Q ss_pred HHHHHHCCCCCCCEEEECCCCCCCCCH---HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCC
Q ss_conf 643100024786079714621576613---46899999863136089861311222347776401100001346521001
Q gi|254780486|r 153 INKWRKSGGKGFPWIVVESIYSMDGDK---APLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHS 229 (381)
Q Consensus 153 l~~~~~~~~~~~~~vv~egv~Sm~G~~---apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~T 229 (381)
. ..++.+.+++.-.-.. .|.+ ..+++|.++|++||+++|-||+++.-. +.-..........+++|+++|
T Consensus 175 ~-----~~~~t~~ii~~~P~NP-TG~v~s~e~~~~l~~la~~~~i~iI~De~Y~~~~--~~~~~~~~~~~~~~~vI~~~S 246 (416)
T PRK09440 175 D-----IDEETGAICVSRPTNP-TGNVITDEELAKLDALARQHNIPLIIDNAYGPPF--PGIIFSEATPLWNPNIILCMS 246 (416)
T ss_pred H-----CCCCCEEEEECCCCCC-CCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCC--CCCCCCCCCCCCCCCEEEECC
T ss_conf 1-----7778439997789899-8877889999999999998795899978987778--763315567667898899745
Q ss_pred CCCCCCCEE---EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCC-------HHHHHHHHHHHHHHH
Q ss_conf 346565302---6752451001000012110000135775025789887898862710-------224789999999987
Q gi|254780486|r 230 CSKALGSSG---ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPA-------LHKSLLQLINITDKI 299 (381)
Q Consensus 230 lsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~-------~~~~l~~~~~~~~~~ 299 (381)
|||. ++.| ||+++++++++.+... ..++.. +.+...-+++.+.+ ++... +++..++........
T Consensus 247 fSK~-~~pG~RiG~~vap~~~i~~l~~~-~~~~~~-~~~~~~Q~~a~~~l---~~~~~~~~~~~~~r~~y~~rr~~~~~~ 320 (416)
T PRK09440 247 LSKL-GLPGVRCGIVIANEEIIEALTNM-NGIISL-APGRLGPAIAAELI---ESGDLLRLSETVIRPFYRQKVQLAIAL 320 (416)
T ss_pred CCCC-CCCCCCEEEEECCHHHHHHHHHH-HHHHCC-CCCHHHHHHHHHHH---HCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 1120-28654258996899999999999-976348-85699999999999---779689999999999999999999999
Q ss_pred HHC---CCCCC---CCCC-EEEEEECC-HHHHHHHHHHHHHCCEEEEEEC--CCCCC----CCCCEEEEECCCCCCHHHH
Q ss_conf 641---79789---9897-28999589-7999999999997791898622--88888----8870399962878999999
Q gi|254780486|r 300 ANK---KIGFS---SQSH-IQSIVIGD-NKSCLNIAKNLQKKGFDIRAIR--PPTVP----INTARLRISITLNVDEPTI 365 (381)
Q Consensus 300 ~~~---~~g~~---~~s~-I~~v~~gd-~~~a~~~~~~L~~~Gi~v~~i~--~PtVp----~~~~rlRi~v~a~~t~edi 365 (381)
..+ ..++. .+.. .+-+-+++ +....++.+.|.++||.+.|.. ||... .+...+|++.+ .++|+|
T Consensus 321 L~~~l~~~~~~~~~P~Ggff~wv~~p~~~~~~~~l~~~l~e~gV~vvPG~~F~~g~~~~~~~~~~~lRlsfa--~~~e~i 398 (416)
T PRK09440 321 LRRALPDLPCLIHKPEGAIFLWLWFKDLPITTEELYQRLKARGVLIVPGHYFFPGLDEPWPHTHQCIRMSYV--QDDEEI 398 (416)
T ss_pred HHHHCCCCCEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCCEEEEECHHHCCCCCCCCCCCCCEEEEEEC--CCHHHH
T ss_conf 998578981488579824699998899998999999999979979982643179998765577886999827--999999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999998873
Q gi|254780486|r 366 VKLFDILPQIISEG 379 (381)
Q Consensus 366 ~~~~~~l~~v~~E~ 379 (381)
++.++.|.++++|.
T Consensus 399 ~egi~RLa~~i~~~ 412 (416)
T PRK09440 399 EKGIAILAEEVEKA 412 (416)
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999999
No 244
>PRK05967 cystathionine beta-lyase; Provisional
Probab=99.75 E-value=4.5e-16 Score=120.33 Aligned_cols=284 Identities=14% Similarity=0.079 Sum_probs=178.7
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHC-CHH--HHHH-HHHCCCCCEEECCCCHHHH
Q ss_conf 58999999998401288851674166024565566631689710045420-267--7526-6640876403056881478
Q gi|254780486|r 74 YNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLV-HAS--IREG-INSGKAQAIAIPHNNINSF 149 (381)
Q Consensus 74 ~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~-HaS--i~~g-~~ls~a~~~~f~HnD~~~L 149 (381)
++....||++||++-|.++|++|+||..|-.+++.+++++||+|++-... ..+ +.+- ..--+..+..+.-.|.+++
T Consensus 63 NPT~~~lE~~la~LEgg~~a~~~sSGmaAi~~~ll~~l~~Gdhiv~~~~~YggT~~l~~~~l~~~Gi~v~~vd~~~~~~~ 142 (392)
T PRK05967 63 TPTTDALCKAIDALEGSAGTILVPSGLAAVTVPLLGFLSAGDHALIVDSVYYPTRHFADTMLKRLGVEVEYYDPEIGAGI 142 (392)
T ss_pred CHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCEEEEEECCCCHHHH
T ss_conf 87799999999998099877994577999999999973899889944898445899999987636869999889999999
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCC
Q ss_conf 99764310002478607971462157661346899999863136089861311222347776401100001346521001
Q gi|254780486|r 150 AENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHS 229 (381)
Q Consensus 150 e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~T 229 (381)
++.++ +++.+|.+|+.-+-.-++.||++|.++|+++|+.++||..-+..++ +..+ ....+|++.|
T Consensus 143 ~~~i~-------~~Tklv~~Etp~NP~l~v~Di~~ia~~A~~~g~~~vVDNTfatP~~-------~~Pl-~~GADiVvhS 207 (392)
T PRK05967 143 EKLMR-------PNTKVVFTESPGSNTFEIQDIPAIAEAAHRHGAIVMMDNTWATPLY-------FRPL-DFGVDISIHA 207 (392)
T ss_pred HHHCC-------CCCEEEEEECCCCCCCEEECHHHHHHHHHHCCCEEEEECCCCCCCE-------ECCC-CCCCCEEEEE
T ss_conf 97448-------7865999855899864553549999999876987996177545342-------1456-5568689996
Q ss_pred CCCCCCC----EEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHH-CC
Q ss_conf 3465653----0267524510010000121100001357750257898878988627102-2478999999998764-17
Q gi|254780486|r 230 CSKALGS----SGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINITDKIAN-KK 303 (381)
Q Consensus 230 lsKa~g~----~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~~~~~-~~ 303 (381)
.+|-+++ .||.|.++++.++.++.... .+...++|..+...+..++.+.-+-++ .+...+++++++.--. ..
T Consensus 208 ~TKyl~GHsDvl~G~v~~~~~~~~~l~~~~~--~~G~~l~P~~a~l~lrGl~TL~lRm~r~~~nA~~lA~~L~~hp~V~~ 285 (392)
T PRK05967 208 ATKYPSGHSDILLGTVSANEKCWPQLLEAHG--TLGLCAGPDDTYQILRGLRTMGIRLEHHRKSALEIARWLEGRPMVAR 285 (392)
T ss_pred CCCCCCCCCCCCCCEECCCHHHHHHHHHHHH--HHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCE
T ss_conf 6646668875204323377788899999987--50466797888998717760999999999989999999971999768
Q ss_pred ---CCC-------------CCCCCEEEEEE--CCHHHHHHHHHHHHHCCEEEE------EECCCCCC--------CCCCE
Q ss_conf ---978-------------99897289995--897999999999997791898------62288888--------88703
Q gi|254780486|r 304 ---IGF-------------SSQSHIQSIVI--GDNKSCLNIAKNLQKKGFDIR------AIRPPTVP--------INTAR 351 (381)
Q Consensus 304 ---~g~-------------~~~s~I~~v~~--gd~~~a~~~~~~L~~~Gi~v~------~i~~PtVp--------~~~~r 351 (381)
.|+ .+.+.++.+.+ +....+..+.+.|.=-.+-++ -+.+|..+ .....
T Consensus 286 V~yPgL~shp~h~la~~~~~g~gg~~sf~l~~g~~~~~~~f~~~l~l~~~a~SlGg~eSL~~h~~~~~~~~~~~~~~~~l 365 (392)
T PRK05967 286 VLHPALPSHPGHEIWKRDFSGASGIFSFVLAAGGHAQAHAFLDALEIFGLGYSWGGYESLALHVKLGDRTVAKNPYAGPV 365 (392)
T ss_pred EECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHHCCCCEEECCCCCCHHEEECCCCCHHHHHHCCCCCCE
T ss_conf 97999889944999998566897389999926839999999982871657315577002026888998999747999898
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999628789999999999999999887
Q gi|254780486|r 352 LRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 352 lRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
||+++...+ ++.+++-|++.++.
T Consensus 366 iRlSVGlEd----~~DLi~DL~qAL~a 388 (392)
T PRK05967 366 IRLQIGLED----VPDLKADLERGFAA 388 (392)
T ss_pred EEEEECCCC----HHHHHHHHHHHHHH
T ss_conf 999944099----99999999999997
No 245
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=99.74 E-value=3.3e-16 Score=121.19 Aligned_cols=289 Identities=18% Similarity=0.213 Sum_probs=179.6
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHH---H-HHHCCCCCE
Q ss_conf 872244368858999999998401288851674166024565566631689710045420267752---6-664087640
Q gi|254780486|r 64 SGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIRE---G-INSGKAQAI 139 (381)
Q Consensus 64 ~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~---g-~~ls~a~~~ 139 (381)
..=||. | ++....||++||++-|.|+|++|+||..|-.+++.+++++||.|++-.......+. . ..--+.++.
T Consensus 53 ~~YsR~--~-nPT~~~lE~~la~LEg~~~a~~~sSGmaAi~~~ll~~l~~Gd~iv~~~~~Yggt~~l~~~~l~~~Gi~~~ 129 (391)
T PRK08133 53 NTYSRF--T-NPTVRMFQERLAALEGAEACVATASGMAAILSVVMALLQAGDHVVSSRSLFGSTLSLFEKIFARFGIETT 129 (391)
T ss_pred CEEECC--C-CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEE
T ss_conf 543489--8-8669999999999809975999658899999999984579998996789745389999987410784444
Q ss_pred EECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHH
Q ss_conf 30568814789976431000247860797146215766134689999986313608986131122234777640110000
Q gi|254780486|r 140 AIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIE 219 (381)
Q Consensus 140 ~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~ 219 (381)
.+.-+|++.+++.++ +++.+|.+|+.-+-...++||++|+++|+++|++++||..-+..++ +..+
T Consensus 130 ~vd~~d~~~~~~ai~-------~~T~lv~~EtpsNP~l~v~Di~~i~~iA~~~g~~~vVDNT~atP~~-------~~Pl- 194 (391)
T PRK08133 130 FVDLTDLDAWRAAVR-------PNTKLFFLETPSNPLTELADIAALAEIAHAAGALLVVDNCFCTPAL-------QQPL- 194 (391)
T ss_pred ECCCCCHHHHHHHCC-------CCCEEEEEECCCCCCCEEECCHHHHHHHHHCCCEEEEECCCCCCCC-------CCHH-
T ss_conf 679879999997458-------7845999978999986655539999998755875998789765244-------4656-
Q ss_pred CCCCCCCCCCCCCCCCC----EEEEEECCCCCC-CCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHH
Q ss_conf 13465210013465653----026752451001-0000121100001357750257898878988627102-24789999
Q gi|254780486|r 220 ERNNVIVMHSCSKALGS----SGALVGSNKIIY-DYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLI 293 (381)
Q Consensus 220 ~~~~~iv~~TlsKa~g~----~GG~i~~~~~ii-~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~ 293 (381)
....+|++.|.+|-+++ .||.|+++++.+ +.+....+ .+...++|..+..++..|+.+.-+-++ .+...+++
T Consensus 195 ~~GaDivvhS~TKyi~GHsD~lgG~v~~~~~~~~~~~~~~~~--~~G~~lsP~~a~l~lrGL~TL~lRm~r~~~nA~~lA 272 (391)
T PRK08133 195 KLGADVVIHSATKYLDGQGRVLGGAVVGSKEFIMEEVFGFLR--TAGPTLSPFNAWVFLKGLETLSLRMEAHSANALELA 272 (391)
T ss_pred HHCCCEEEEECCCEECCCCCCEEEEEECCHHHHHHHHHHHHH--HCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 618837999666030488874448996367999999999999--748888932778986047769999999999999999
Q ss_pred HHHHHHHH-CC---CCC-------------CCCCCEEEEEE-CCHHHHHHHHHHHH--HCCEEE----EEECCCCCC---
Q ss_conf 99998764-17---978-------------99897289995-89799999999999--779189----862288888---
Q gi|254780486|r 294 NITDKIAN-KK---IGF-------------SSQSHIQSIVI-GDNKSCLNIAKNLQ--KKGFDI----RAIRPPTVP--- 346 (381)
Q Consensus 294 ~~~~~~~~-~~---~g~-------------~~~s~I~~v~~-gd~~~a~~~~~~L~--~~Gi~v----~~i~~PtVp--- 346 (381)
++++.--. .. .|+ .+.+.++.+.+ ++...+.++.+.|. ..+.-. +-+..|+.-
T Consensus 273 ~~L~~hp~V~~V~yPgL~shp~h~la~r~~~g~Gg~~sf~l~g~~~~~~~f~~~l~l~~~a~SlGg~eSLi~~Pa~~th~ 352 (391)
T PRK08133 273 EWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAWRVIDATRLISITANLGDTKTTITHPATTTHG 352 (391)
T ss_pred HHHHCCCCCCEEECCCCCCCCCHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEECCCCCCCCEEECCCCCCCC
T ss_conf 99970999147989999899777899970899972589997199999999998288465613527730122675113454
Q ss_pred -----------CCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf -----------887039996287899999999999999998
Q gi|254780486|r 347 -----------INTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 347 -----------~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
.....||+++...+. +.+++-|++.+
T Consensus 353 ~~~~e~r~~~GI~~~liRlSVGlEd~----~DLi~Dl~qAL 389 (391)
T PRK08133 353 RLSPEARAAAGITEGLIRVAVGLEDV----ADLKADLARGL 389 (391)
T ss_pred CCCHHHHHHCCCCCCEEEEEEEECCH----HHHHHHHHHHH
T ss_conf 38999998669894959999610999----99999999986
No 246
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.74 E-value=2.9e-15 Score=115.34 Aligned_cols=291 Identities=16% Similarity=0.161 Sum_probs=173.0
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHH-HCCHH--HHHHH-HHCCCCCE
Q ss_conf 8722443688589999999984012888516741660245655666316897100454-20267--75266-64087640
Q gi|254780486|r 64 SGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDK-LVHAS--IREGI-NSGKAQAI 139 (381)
Q Consensus 64 ~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~-~~HaS--i~~g~-~ls~a~~~ 139 (381)
..=||. | ++....||++||++-|.++|+.|+||..|-.+++.+++++||+|++-. ....+ +.+.. .--+.++.
T Consensus 61 ~~YsR~--g-NPT~~~lE~~la~LEgg~~a~~~sSGmAAI~~~ll~ll~~Gdhiv~~~~lYggT~~l~~~~l~~~GI~~~ 137 (437)
T PRK05613 61 PVYSRL--T-NPTVEALENRIASLEGGVHAVAFASGQAATTAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIETT 137 (437)
T ss_pred CEEECC--C-CHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEE
T ss_conf 712089--8-8789999999999839985899658999999999997288998997898763478997767751681589
Q ss_pred EEC-CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEH
Q ss_conf 305-6881478997643100024786079714621576613468999998631360898613112223477764011000
Q gi|254780486|r 140 AIP-HNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHII 218 (381)
Q Consensus 140 ~f~-HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~ 218 (381)
.+. .+|.+.++..++ +++.+|.+|+.-+-...+.||++|+++|+++|+.++||-.-+..++ +..+
T Consensus 138 fvd~~~d~~~~~~~i~-------~~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~-------~~Pl 203 (437)
T PRK05613 138 FVENPDDPESWQAAVQ-------PNTKAFFGETFANPQADVLDIPAVAEVAHRNQVPLIIDNTIATAAL-------VRPL 203 (437)
T ss_pred EECCCCCHHHHHHHCC-------CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCHHC-------CCHH
T ss_conf 9479999999997378-------7855999987999865335799999999876983995166520310-------6856
Q ss_pred HCCCCCCCCCCCCCCCCC----EEEEEECCCCCCCCC--CC---------------C---------------CCC-E--E
Q ss_conf 013465210013465653----026752451001000--01---------------2---------------110-0--0
Q gi|254780486|r 219 EERNNVIVMHSCSKALGS----SGALVGSNKIIYDYL--IN---------------Y---------------AKP-F--I 259 (381)
Q Consensus 219 ~~~~~~iv~~TlsKa~g~----~GG~i~~~~~ii~~l--~~---------------~---------------~~~-~--i 259 (381)
....+|++.|.+|-+++ .||.|+++..+. +. ++ + .+. . -
T Consensus 204 -~~GaDiVvhS~TKYl~GHsDvlgG~vv~~~~~~-w~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~a~~~~~r~~~~~~ 281 (437)
T PRK05613 204 -ELGADVVVASLTKFYTGNGSGLGGVLIDGGKFD-WTVERDGKPVFPYFVTPDPAYHGLKYADLGAPAFGLKARVGLLRD 281 (437)
T ss_pred -HHCCCEEEEECCCCCCCCCCEEEEEEEECCCCC-HHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_conf -748988999555122688764516998468542-222102332243346873777411565411167799999999985
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHC-C---CC--------------CCCCCCEEEEEE-CC
Q ss_conf 01357750257898878988627102-24789999999987641-7---97--------------899897289995-89
Q gi|254780486|r 260 YTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINITDKIANK-K---IG--------------FSSQSHIQSIVI-GD 319 (381)
Q Consensus 260 fst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~~~~~~-~---~g--------------~~~~s~I~~v~~-gd 319 (381)
+...++|..+..++..|+.|.-+-++ .+...+++++++.--.. . .| ......++.+.+ ++
T Consensus 282 ~G~~lsP~~a~L~lrGL~TL~lRm~r~~~nA~~vA~~L~~hp~V~~V~yPgL~s~p~h~la~~~~~~~~G~~~sf~lkg~ 361 (437)
T PRK05613 282 TGATLSPFNAWAAVQGLDTLSLRLERHNENAIKVAEFLNNHEKVAKVNFAGLPDSPWYATKEKLGLKYTGSVLTFELKGG 361 (437)
T ss_pred CCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCC
T ss_conf 15678848889987367508899999999999999998509994779899999983299999858999506999996797
Q ss_pred HHHHHHHHHHHHHCCEEE------EEECCCCCCC--------------CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 799999999999779189------8622888888--------------870399962878999999999999999988
Q gi|254780486|r 320 NKSCLNIAKNLQKKGFDI------RAIRPPTVPI--------------NTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 320 ~~~a~~~~~~L~~~Gi~v------~~i~~PtVp~--------------~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
.+.+.++.+.|.=-.+.+ +-+.+|+... ....||+++...+ ++.+++-|++.++
T Consensus 362 ~~~a~~f~~~L~lf~~a~SlGg~eSLi~hPa~~th~~~~~e~~~~~Gi~~~lvRlSVGlEd----~eDLiaDL~qAL~ 435 (437)
T PRK05613 362 KDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARAGVTQATVRLSVGIET----IDDIIADLEGGFA 435 (437)
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCC----HHHHHHHHHHHHH
T ss_conf 9999999984865412016776550547764345656899999866989494999941199----9999999999982
No 247
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=99.74 E-value=1.3e-15 Score=117.40 Aligned_cols=285 Identities=14% Similarity=0.151 Sum_probs=175.5
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHC-CHH--HHHHHH-HCCCCCEEECCCCHHHH
Q ss_conf 58999999998401288851674166024565566631689710045420-267--752666-40876403056881478
Q gi|254780486|r 74 YNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLV-HAS--IREGIN-SGKAQAIAIPHNNINSF 149 (381)
Q Consensus 74 ~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~-HaS--i~~g~~-ls~a~~~~f~HnD~~~L 149 (381)
++....||++||++-|.|.|++|+||..|-.+++.+++++||.|++-... ..+ +.+... --+.++..+..+|.+.+
T Consensus 51 nPT~~~lE~~la~LEg~~~a~~~~SGMaAis~~l~~~l~~Gd~vv~~~~~Yg~T~~l~~~~~~~~gi~v~~~d~~d~~~~ 130 (386)
T PRK08045 51 NPTRDVVQRALAELEGGAGAVLTNTGMSAIHLVTTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQAL 130 (386)
T ss_pred CHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCCHHHH
T ss_conf 86699999999998099837985678999999999707999989983786348999999872079579999699998999
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCC
Q ss_conf 99764310002478607971462157661346899999863136089861311222347776401100001346521001
Q gi|254780486|r 150 AENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHS 229 (381)
Q Consensus 150 e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~T 229 (381)
++.++. ++.+|.+|+.-+-.-.+.|+++|+++|+++|++++||-.-+..++ +..+ ....+|++.+
T Consensus 131 ~~~i~~-------~Tklv~~EspsNP~l~v~Di~~i~~~a~~~g~~~vvDNT~atP~~-------~~Pl-~~GaDivvhS 195 (386)
T PRK08045 131 RAALAE-------KPKLVLVESPSNPLLRVVDIAKICHLAREAGAVSVVDNTFLSPAL-------QNPL-ALGADLVLHS 195 (386)
T ss_pred HHHCCC-------CCEEEEEECCCCCCCEECCCHHHHHHHHHCCCEEEEECCCCCHHC-------CCCC-CCCCCEEEEE
T ss_conf 975377-------855999977999876105769999999976998998275232311-------2730-0388789996
Q ss_pred CCCCCCC----EEEEEEC-CCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHH-C
Q ss_conf 3465653----0267524-510010000121100001357750257898878988627102-2478999999998764-1
Q gi|254780486|r 230 CSKALGS----SGALVGS-NKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINITDKIAN-K 302 (381)
Q Consensus 230 lsKa~g~----~GG~i~~-~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~~~~~-~ 302 (381)
++|-+++ .||.|++ ++++...++...+. +...++|..+..++..++.+.-+-++ .+...++++++...-. +
T Consensus 196 ~TKyi~GhsD~l~G~vv~~~~~~~~~~~~~~~~--~G~~~~p~~a~l~~rGL~TL~lRm~~~~~nA~~lA~~L~~hp~V~ 273 (386)
T PRK08045 196 CTKYLNGHSDVVAGVVIAKDPEVVTELAWWANN--IGVTGGAFDSYLLLRGLRTLVPRMELAQRNAQAIVKYLQTQPLVK 273 (386)
T ss_pred CCEEECCCCCCEEEEEEECCHHHHHHHHHHHHH--HCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 661305887723489981778899999999998--587789889999983688778899999999999999986399853
Q ss_pred C---CCC-------------CCCCCEEEEEE-CCHHHHHHHHHHHH--HCCEEE----EEECCCCCCC------------
Q ss_conf 7---978-------------99897289995-89799999999999--779189----8622888888------------
Q gi|254780486|r 303 K---IGF-------------SSQSHIQSIVI-GDNKSCLNIAKNLQ--KKGFDI----RAIRPPTVPI------------ 347 (381)
Q Consensus 303 ~---~g~-------------~~~s~I~~v~~-gd~~~a~~~~~~L~--~~Gi~v----~~i~~PtVp~------------ 347 (381)
+ .++ .+-+.++.+.+ ++...+.++.+.|. ..++-. +-+.+|+...
T Consensus 274 ~V~yPgL~s~p~h~la~~q~~g~Ggm~sf~l~g~~~~~~~f~~~l~lf~~a~SlGg~eSLi~~pa~~th~~~~~e~r~~~ 353 (386)
T PRK08045 274 KLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTLAESLGGVESLISHAATMTHAGMAPEARAAA 353 (386)
T ss_pred EEECCCCCCCCCHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHC
T ss_conf 79899998995779999708999735799965979999999970883556026688640003764235656899999866
Q ss_pred --CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf --87039996287899999999999999998873
Q gi|254780486|r 348 --NTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 348 --~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
....||+++.. ||++.+++-|++.++..
T Consensus 354 Gi~~~liRlSvGl----Ed~eDLi~DL~qAL~aa 383 (386)
T PRK08045 354 GISETLLRISTGI----EDGEDLIADLENGFRAA 383 (386)
T ss_pred CCCCCEEEEEEEE----CCHHHHHHHHHHHHHHH
T ss_conf 9895969999600----99999999999999985
No 248
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=99.74 E-value=3.9e-16 Score=120.70 Aligned_cols=289 Identities=15% Similarity=0.138 Sum_probs=177.7
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHH---HHH-HHCCCCCE
Q ss_conf 87224436885899999999840128885167416602456556663168971004542026775---266-64087640
Q gi|254780486|r 64 SGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIR---EGI-NSGKAQAI 139 (381)
Q Consensus 64 ~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~---~g~-~ls~a~~~ 139 (381)
..=||. | ++....||++||.+-|.|+|+.|+||..|-.+++.+++++||.|++-...-.+.+ ... .--+.++.
T Consensus 65 ~~YsR~--~-NPT~~~lE~~la~LEgg~~a~~~sSGMaAi~~~ll~ll~~Gd~iv~~~~~YGgT~~l~~~~l~~~GI~~~ 141 (406)
T PRK07810 65 YVYSRY--G-NPTVSMFEERLRLIEGAPACFATASGMAAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETV 141 (406)
T ss_pred CCCCCC--C-CHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEE
T ss_conf 613089--8-8628999999999709985998438999999999997289998998379863779999977644874999
Q ss_pred EECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHH
Q ss_conf 30568814789976431000247860797146215766134689999986313608986131122234777640110000
Q gi|254780486|r 140 AIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIE 219 (381)
Q Consensus 140 ~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~ 219 (381)
.|.-+|++++++.++. ++.+|.+|++-+-...+.||++|.++|+++|+.++||-.-+..++ +..+
T Consensus 142 ~vd~~d~~~~~~ai~~-------~Tk~v~~EtpsNP~l~v~Di~aia~iA~~~g~~~vVDNTfaTP~~-------~rPl- 206 (406)
T PRK07810 142 FVDGDDLSQWEEALSV-------PTQAVFFETPSNPMQSLVDIAAVTELAHAAGAKVVLDNVFATPLL-------QQGF- 206 (406)
T ss_pred EECCCCHHHHHHHCCC-------CCEEEEEECCCCCCCEECCHHHHHHHHHHCCCEEEEECCCCCCCC-------CCCH-
T ss_conf 9689885999975588-------862899844899985611679999999974985999788777553-------5842-
Q ss_pred CCCCCCCCCCCCCCCCC----EEEEEECCCCCCCC-CCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHH
Q ss_conf 13465210013465653----02675245100100-00121100001357750257898878988627102-24789999
Q gi|254780486|r 220 ERNNVIVMHSCSKALGS----SGALVGSNKIIYDY-LINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLI 293 (381)
Q Consensus 220 ~~~~~iv~~TlsKa~g~----~GG~i~~~~~ii~~-l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~ 293 (381)
....+|++.|.+|-+++ .||.|+++++.++. ++...+ .+...++|..+..++..|+.+.-+-++ .+...+.+
T Consensus 207 ~~GADiVvhS~TKyi~GHsd~lgG~v~~~~~~~~~~~~~~~~--~~G~~lsP~~a~l~lrGL~TL~lRm~r~~~nA~~vA 284 (406)
T PRK07810 207 PLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMR--HTGPALSAFNAWTLLKGLETLAIRVQHSNASALRIA 284 (406)
T ss_pred HCCCCEEEEECCCCCCCCCCEECCEEECCHHHHHHHHHHHHH--HCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 128988999535323688760363695267888999999999--738989878889987068979999999999999999
Q ss_pred HHHHHHHH-CC---CC-------------CCCCCCEEEEEECC-HHHHH----HHHHHHH--HCCEEE----EEECCCCC
Q ss_conf 99998764-17---97-------------89989728999589-79999----9999999--779189----86228888
Q gi|254780486|r 294 NITDKIAN-KK---IG-------------FSSQSHIQSIVIGD-NKSCL----NIAKNLQ--KKGFDI----RAIRPPTV 345 (381)
Q Consensus 294 ~~~~~~~~-~~---~g-------------~~~~s~I~~v~~gd-~~~a~----~~~~~L~--~~Gi~v----~~i~~PtV 345 (381)
++++.--. +. -| +.+.+.++.+.+.. ..... ++.+.|. ..+.-. +-+..|+.
T Consensus 285 ~~L~~hp~V~~V~yPgL~shp~h~la~r~~~g~G~~~sf~l~~~~~~~~~~~~~~~~~l~l~~~a~slGg~~SLi~~Pas 364 (406)
T PRK07810 285 EFLEGHPAVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKQRAFEVLDKLRLIDISNNLGDAKSLITHPAT 364 (406)
T ss_pred HHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEECCCCCCEEEECCCC
T ss_conf 99973998137980578778177899844789986328998036178899999999828724353356766604667753
Q ss_pred C--------------CCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 8--------------887039996287899999999999999998
Q gi|254780486|r 346 P--------------INTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 346 p--------------~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
- .....||+++.. ||++.+++-|++.+
T Consensus 365 ~th~~~~~e~r~~~Gi~~~liRlSVGl----Ed~~DLi~DL~qAL 405 (406)
T PRK07810 365 TTHRAMGPEGRAAIGLGDGVVRISVGL----EDTDDLIADLDRAL 405 (406)
T ss_pred CCCCCCCHHHHHHCCCCCCEEEEEECC----CCHHHHHHHHHHHC
T ss_conf 565107998998669794959999321----99999999999754
No 249
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.74 E-value=2e-14 Score=110.08 Aligned_cols=285 Identities=18% Similarity=0.197 Sum_probs=172.8
Q ss_pred CHHHHHHHHH----HHHHCCCC--CEEEECCCCHHHHHHHHHHCC----CCCCCCHHHHCCHHHHHHHHHCCCCCEEECC
Q ss_conf 5899999999----84012888--516741660245655666316----8971004542026775266640876403056
Q gi|254780486|r 74 YNQHLELEEE----AADFFGFE--KMLYFGSGYAANMAILSTLPQ----ATDLIVYDKLVHASIREGINSGKAQAIAIPH 143 (381)
Q Consensus 74 ~~~~~~lE~~----lA~~~g~e--~al~~~sG~~An~~~i~~l~~----~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~H 143 (381)
++.-.++|++ +|+++|.| ...+++.|+.+|+.++.+--+ +...|++-+.+|.|+..+++.-+.+++..+-
T Consensus 58 ~P~~~~mE~~vv~~~a~l~g~p~~~G~~tsGGTes~l~Al~aaR~~~~~~~p~iv~~~~aH~s~~Kaa~~~gi~~~~vp~ 137 (375)
T PRK13520 58 FPGTAKLEREVVRMLGELLHLPDAYGYITSGGTEANIQAVRAARNLADAEKPNIVVPESAHFSFDKAADMLGLELRRAPL 137 (375)
T ss_pred CHHHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHCCCEEEEEEE
T ss_conf 87799999999999999809998808995618999999999997626899987999673169999999974955699403
Q ss_pred -----CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE-EEE
Q ss_conf -----88147899764310002478607971462157661346899999863136089861311222347776401-100
Q gi|254780486|r 144 -----NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL-THI 217 (381)
Q Consensus 144 -----nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~-~~~ 217 (381)
-|+++|++.+++. ...+|.+=|-+ +.|.+=|+++|.++|++||+.+.||-|+| |++-+.-.-. ...
T Consensus 138 d~~~~~d~~~l~~~i~~~------ti~vvatagtt-~~G~iDpi~~i~~i~~~~~i~lHVDaa~G-Gf~~pf~~~~~~~d 209 (375)
T PRK13520 138 DEDYRVDVKSVEDLIDDN------TIGIVGIAGTT-ELGQVDPIPELSKIALENDIFLHVDAAFG-GFVIPFLDDPYDFD 209 (375)
T ss_pred CCCCCCCHHHHHHHHHHC------CEEEEEECCCC-CCEEECCHHHHHHHHHHCCCEEEEECCCC-EEEEECCCCCCCCC
T ss_conf 888869899999988649------57999925887-88223599999999997597499862552-02211257664000
Q ss_pred HHCCCCCCCCCCCCCCCCC---EEEEEECCCCCCCCCCCCCCCEEC-------CCCCCCCHHHHHHHHHHHHHHCC--CH
Q ss_conf 0013465210013465653---026752451001000012110000-------13577502578988789886271--02
Q gi|254780486|r 218 IEERNNVIVMHSCSKALGS---SGALVGSNKIIYDYLINYAKPFIY-------TTSPSPILAVVACEALKLIKRKP--AL 285 (381)
Q Consensus 218 ~~~~~~~iv~~TlsKa~g~---~GG~i~~~~~ii~~l~~~~~~~if-------st~l~P~~~aaa~aal~~l~~~~--~~ 285 (381)
+++...+-+....-|-..+ .|.++.-++++.+.+... .+|+. +.+-|...+++.-+++..+-.+- +.
T Consensus 210 f~l~~vdSIs~d~HK~g~~p~g~g~vl~r~~~~~~~~~~~-~~Yl~~~~~~tl~gSR~g~~~~~~Wa~l~~~G~~Gy~~~ 288 (375)
T PRK13520 210 FSLPGVSSITIDPHKMGLAPIPAGGILFRDPEFLDALDVD-TPYLTSKKQATLTGTRSGAGVAATYAVMKYLGREGYRKV 288 (375)
T ss_pred CCCCCEEEEEECCCCCCCCCCCEEEEEECCHHHHHHHCCC-CHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHH
T ss_conf 4778802642461113651577159998788999872467-714358987356058877559999999999739999999
Q ss_pred HHHHHHHHHHHHHHHHCCCCC----CCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCC
Q ss_conf 247899999999876417978----9989728999589799999999999779189862288888887039996287899
Q gi|254780486|r 286 HKSLLQLINITDKIANKKIGF----SSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVD 361 (381)
Q Consensus 286 ~~~l~~~~~~~~~~~~~~~g~----~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t 361 (381)
.++..++.+++.+.. +..++ +...+|+.+...+. ..+.+.|.++|+.+..-..| ..+||+++..+|
T Consensus 289 ~~~~~~~a~~la~~l-~~~g~e~~~~P~~~iV~Fr~~~~---~~l~d~l~~~GW~v~~~~~P------~~lhivv~~~~~ 358 (375)
T PRK13520 289 VERCMENTRYLVEEL-EKLGFEPVIEPVLNIVAFDDPNP---HEVRKKLRERGWRVSVTRCP------EALRIVVMPHVT 358 (375)
T ss_pred HHHHHHHHHHHHHHH-HHCCCEEECCCCCEEEEEECCCH---HHHHHHHHHCCCEECCCCCC------CEEEEEEECCCC
T ss_conf 999999999999999-86799897089813999957999---99999999769874578899------848999959999
Q ss_pred HHHHHHHHHHHHHHHH
Q ss_conf 9999999999999988
Q gi|254780486|r 362 EPTIVKLFDILPQIIS 377 (381)
Q Consensus 362 ~edi~~~~~~l~~v~~ 377 (381)
++.+|.|++-|+++.+
T Consensus 359 ~~~id~fl~DL~e~~~ 374 (375)
T PRK13520 359 REHIEAFLEDLDEVKK 374 (375)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 8999999999999952
No 250
>PRK07050 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=6.6e-16 Score=119.29 Aligned_cols=287 Identities=15% Similarity=0.072 Sum_probs=179.5
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHH---HHH-HHHCCCCCEEECCCCHHH
Q ss_conf 8589999999984012888516741660245655666316897100454202677---526-664087640305688147
Q gi|254780486|r 73 NYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASI---REG-INSGKAQAIAIPHNNINS 148 (381)
Q Consensus 73 ~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi---~~g-~~ls~a~~~~f~HnD~~~ 148 (381)
.++..+.||++||++-|.|+|++|+||..|-.+++.+++++||.|++-...-.+- .+. .+--+.++..+.-+|.+.
T Consensus 63 ~nPT~~~lE~~la~LEg~~~a~~~sSGmaAi~~~ll~ll~~Gd~vv~~~~~Yg~T~~~~~~~l~~~Gi~v~f~d~~d~~~ 142 (394)
T PRK07050 63 ATPTSLALAQRLAEIEGGRHALLQPSGLAAISNVYFGLVKAGDDVLIPDNVYGPNRDFGEWLAKDFGITVRFYDPMIGAG 142 (394)
T ss_pred CCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCCCHHH
T ss_conf 88659999999999829974999657899999999996079985783566633389999987531887999979999899
Q ss_pred HHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCC
Q ss_conf 89976431000247860797146215766134689999986313608986131122234777640110000134652100
Q gi|254780486|r 149 FAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMH 228 (381)
Q Consensus 149 Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~ 228 (381)
+++.++ +++.+|.+|+.-+-.-.++||+++.++|+++|++++||-.-+..++ +..+ ....+|++.
T Consensus 143 ~~~~i~-------~~Tkli~~Esp~NP~l~v~Di~~ia~~A~~~g~~~vVDNT~atP~~-------~~Pl-~~GaDiVih 207 (394)
T PRK07050 143 IADLIQ-------PNTRLIWLEAPGSVTMEVPDVPAITAAARARGVVTAIDNTWSAGLA-------FKPF-EHGVDISVQ 207 (394)
T ss_pred HHHHCC-------CCCEEEEEECCCCCCCEECCHHHHHHHHHHCCCEEEEECCCCCCCC-------CCCC-CCCCCEEEE
T ss_conf 984368-------6644999844898762543729999999875986998578668650-------0631-046989995
Q ss_pred CCCCCCCCE----EEE-EECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHC
Q ss_conf 134656530----267-524510010000121100001357750257898878988627102-24789999999987641
Q gi|254780486|r 229 SCSKALGSS----GAL-VGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINITDKIANK 302 (381)
Q Consensus 229 TlsKa~g~~----GG~-i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~~~~~~ 302 (381)
|.+|-+++. ||. +.+++++.+.++.... .....++|..+...+..++.+.-+-++ .+...+++++++.--..
T Consensus 208 S~TKyi~GHsDvl~G~vv~~~~~~~~~l~~~~~--~~G~~~sp~~a~l~~rGL~TL~lRm~r~~~nA~~lA~~L~~hp~V 285 (394)
T PRK07050 208 ALTKYQSGGSDVLMGATITADAELHAKLKLARM--RLGIGVSADDCSLVLRGLPSMQVRFDAHSRSALELAQWLKARPEI 285 (394)
T ss_pred ECCEEECCCCCCCCCCEECCCHHHHHHHHHHHH--HCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCE
T ss_conf 066344378887677365699999999999998--626778989999997489847888999999999999998618981
Q ss_pred ----CCCC-------------CCCCCEEEEEEC---CHHHHHHHHHHHH--HCCEEEEEE----CC--------CCCCCC
Q ss_conf ----7978-------------998972899958---9799999999999--779189862----28--------888888
Q gi|254780486|r 303 ----KIGF-------------SSQSHIQSIVIG---DNKSCLNIAKNLQ--KKGFDIRAI----RP--------PTVPIN 348 (381)
Q Consensus 303 ----~~g~-------------~~~s~I~~v~~g---d~~~a~~~~~~L~--~~Gi~v~~i----~~--------PtVp~~ 348 (381)
..|+ .+.+.++.+.+. +...+.++.+.|. ..+.-...+ .+ ...|..
T Consensus 286 ~~V~yPgL~s~p~h~~a~~~~~g~gg~~s~~~~~~~~~~~~~~f~~~l~l~~~a~SlGg~eSL~~p~~~~~~~~~~~~~~ 365 (394)
T PRK07050 286 ATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYDAAQVDAFVEALELFAIGWSWGGACSLAMPYDVASMRTGKWPHR 365 (394)
T ss_pred EEEECCCCCCCCCHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 08989998898159999975799962899997566799999999983882655026457664745897655562002789
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 7039996287899999999999999998
Q gi|254780486|r 349 TARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 349 ~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
...||+++...+.++-|+.+-.+|+..+
T Consensus 366 ~~liRlSvGlEd~~DLi~DL~qAL~aa~ 393 (394)
T PRK07050 366 GTLVRFYIGLEDEADLRADLEQALQAAL 393 (394)
T ss_pred CCEEEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 9869999411999999999999999740
No 251
>PRK05939 hypothetical protein; Provisional
Probab=99.73 E-value=2.9e-15 Score=115.31 Aligned_cols=290 Identities=17% Similarity=0.170 Sum_probs=175.4
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHH---HHHHHHHCCCCCEEE
Q ss_conf 72244368858999999998401288851674166024565566631689710045420267---752666408764030
Q gi|254780486|r 65 GGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHAS---IREGINSGKAQAIAI 141 (381)
Q Consensus 65 ~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaS---i~~g~~ls~a~~~~f 141 (381)
.=+|. .++....||++||++-|.+.|++|+||..|-.+++.+++++||+|++-...-.. +.+-.+--+.++..|
T Consensus 39 ~YsR~---~nPT~~~le~~la~LEgg~~a~~~sSGMaAi~~~l~~ll~~Gd~il~~~~~YG~t~~l~~~l~~~GI~v~~v 115 (396)
T PRK05939 39 TYARQ---GTPTTAALEAKITEMEGGVGTVCFATGMAAIAAVFLTLLRAGDHLVSSQYLFGNTNSLLGTLQGLGVEVTMV 115 (396)
T ss_pred EEECC---CCHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCEEEEEE
T ss_conf 34089---986799999999998299749996579999999999835889889953886922999999865318699998
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCC
Q ss_conf 56881478997643100024786079714621576613468999998631360898613112223477764011000013
Q gi|254780486|r 142 PHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEER 221 (381)
Q Consensus 142 ~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~ 221 (381)
.-+|.+.+++.++ ++..+|.+|+.-+=...+.||++|.++|+++|++++||-.-+..++ +..+ ..
T Consensus 116 d~~d~~~~~~ai~-------~~Tklv~~EspsNP~l~v~Di~~i~~ia~~~g~~~vVDNT~atP~~-------~~Pl-~~ 180 (396)
T PRK05939 116 DATDVQQVAAAIR-------PNTRMVFVETIANPGTQVADLAGIGALCRERGLVYVVDNTMTSPWL-------FRPK-SV 180 (396)
T ss_pred CCCCHHHHHHHHC-------CCCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHH-------CCHH-HH
T ss_conf 8979899998618-------5661899980899987075899999999983997999777630420-------5855-63
Q ss_pred CCCCCCCCCCCCCCC----EEEEEECCC--------CCCCCCCCC-----------CCCE-ECCCCCCCCHHHHHHHHHH
Q ss_conf 465210013465653----026752451--------001000012-----------1100-0013577502578988789
Q gi|254780486|r 222 NNVIVMHSCSKALGS----SGALVGSNK--------IIYDYLINY-----------AKPF-IYTTSPSPILAVVACEALK 277 (381)
Q Consensus 222 ~~~iv~~TlsKa~g~----~GG~i~~~~--------~ii~~l~~~-----------~~~~-ifst~l~P~~~aaa~aal~ 277 (381)
..+|++.|++|-+++ .||.|.++. ++.+..+.. .+.+ -....++|..+..++..++
T Consensus 181 GaDivvhS~TKyi~GhsD~l~G~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~r~lG~~l~p~~a~l~~rGL~ 260 (396)
T PRK05939 181 GASLVINSLSKYIAGHGNALGGAVTDTGLFDWSGYPNIFPAYRKGDPQQWGLTQIRKKGLRDMGATLSSEAAHRIAIGAE 260 (396)
T ss_pred CCCEEEEECCCCCCCCCCEEEEEEECCCCCCHHHCCHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCC
T ss_conf 89889983433025887747699965763203323113245415528776689999888885278789899999982666
Q ss_pred HHHHCCCH-HHHHHHHHHHHHHHHHC-C---CCC-------------CCCCCEEEEEECCHHHHHHHHHHHH--HCCEEE
Q ss_conf 88627102-24789999999987641-7---978-------------9989728999589799999999999--779189
Q gi|254780486|r 278 LIKRKPAL-HKSLLQLINITDKIANK-K---IGF-------------SSQSHIQSIVIGDNKSCLNIAKNLQ--KKGFDI 337 (381)
Q Consensus 278 ~l~~~~~~-~~~l~~~~~~~~~~~~~-~---~g~-------------~~~s~I~~v~~gd~~~a~~~~~~L~--~~Gi~v 337 (381)
.+.-+-++ .+...+++++++..-.. . .|+ .+.+.++.+.+.+...+.++.+.|. ..++-.
T Consensus 261 TL~lRm~~~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~~~~a~~~~~g~gg~~sf~l~~~~~~~~f~~~l~l~~~a~Sl 340 (396)
T PRK05939 261 TLALRMDRSCSNALALATFLEGHPAVARVYYPGLASHPQHARATELFGAYGGLLSFELADGIDCFDFLNRLKLVIKATHL 340 (396)
T ss_pred CHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCEECCCC
T ss_conf 18899999998899999998639995789899999994499999866488637999966889999999808724675265
Q ss_pred ----EEECCCCC------C--------CCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf ----86228888------8--------887039996287899999999999999998
Q gi|254780486|r 338 ----RAIRPPTV------P--------INTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 338 ----~~i~~PtV------p--------~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
+-+.+|+. | .....+|+++..... +.+++-|++.+
T Consensus 341 Gg~eSLi~~p~~t~h~~~~~e~r~~~Gi~~~liRlSvGlEd~----~DLi~DL~qAL 393 (396)
T PRK05939 341 GDTRTLAIPVAHTIYYEMGAERRASMGIADSLIRVSVGIEDT----ADLIADFEQAL 393 (396)
T ss_pred CCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCEEEEEEEECCH----HHHHHHHHHHH
T ss_conf 763321158621145238999998669791969999410999----99999999998
No 252
>TIGR01979 sufS cysteine desulfurases, SufS subfamily; InterPro: IPR010970 Cysteine desulphurases are pyridoxal-phosphate enzymes which catalyse the removal of sulphur from L-cysteine to form L-alanine and elemental sulphur. These enzymes have been shown to play an important role in the biosynthesis of iron-sulphur clusters, thionucleosides in tRNA, thiamine, biotin, lipoate and molydopterin This entry represents a subfamily of NifS-related cysteine desulphurases that are often involved in iron-sulphur cluster formation, which is needed for nitrogen fixation and other vital functions . Many of these enzymes, in addition to cysteine desulphurase activity, also show selenocysteine lyase activity where L-selenocysteine is converted to L-alanine and selenide . Some of these enzymes are much more specific for selenocysteine than cysteine and are thus believed to function in selenium metabolism rather than sulphur metabolism. Structural studies of the E. coli and Synechocystis enzymes indicate that they are homodimers which show a similar fold to other members of the alpha family of pyridoxal-phosphate enzymes .; GO: 0030170 pyridoxal phosphate binding, 0031071 cysteine desulfurase activity, 0006534 cysteine metabolic process.
Probab=99.73 E-value=1.2e-15 Score=117.69 Aligned_cols=321 Identities=18% Similarity=0.233 Sum_probs=208.0
Q ss_pred CCC-CEEEECCCCCCCCCCCCH-HHHHHHHHHHHHHC-----CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC--CEEEE
Q ss_conf 289-768980344656677988-99999999998637-----8688722443688589999999984012888--51674
Q gi|254780486|r 26 LRR-QDIWDFTSHDYLALSSST-LLREKILSSLDSKI-----PIGSGGSRLLCGNYNQHLELEEEAADFFGFE--KMLYF 96 (381)
Q Consensus 26 ~~~-~~~l~f~s~dYLGl~~~p-~v~~a~~~a~~~~~-----g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e--~al~~ 96 (381)
+.| +.++-|-| =-=+|-| .|+++..+-..+.| |.+.-|.| -++.|++.=+++|+|.|+. +=++|
T Consensus 14 ~~Gg~pLvYLDs---AAT~QKP~~Vida~~~yY~~~nANVHRG~H~Ls~~----AT~~YE~~R~kva~FiNA~~~~EIvF 86 (409)
T TIGR01979 14 VNGGKPLVYLDS---AATSQKPQAVIDAVEEYYRKSNANVHRGIHTLSVR----ATEAYEEAREKVAKFINAASAEEIVF 86 (409)
T ss_pred CCCCCCEEEECC---CCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH----HHHHHHHHHHHHHHHHCCCCCCCEEE
T ss_conf 679984177348---51002847799999999875167001689999999----99999999999998508899854787
Q ss_pred CCCCHH--HHHHHH---HHCCC----CCCCCHHHHCCHH-H--H-HHHHHCCCCCEEECCC-----CHHHHHHHHHHHHH
Q ss_conf 166024--565566---63168----9710045420267-7--5-2666408764030568-----81478997643100
Q gi|254780486|r 97 GSGYAA--NMAILS---TLPQA----TDLIVYDKLVHAS-I--R-EGINSGKAQAIAIPHN-----NINSFAENINKWRK 158 (381)
Q Consensus 97 ~sG~~A--n~~~i~---~l~~~----~d~ii~D~~~HaS-i--~-~g~~ls~a~~~~f~Hn-----D~~~Le~~l~~~~~ 158 (381)
..|+.. |+-+.. .-.++ ||.|+.=+.-|-| | | .-++-.||+.+.++=+ |+++|++++.+-
T Consensus 87 T~gtTe~iNLvA~s~g~~~l~~av~pGDeIv~s~mEHHaNiVPWQ~l~~r~GA~lk~~~l~~~G~ld~~~l~~~~~~~-- 164 (409)
T TIGR01979 87 TRGTTESINLVAYSWGRSRLKAAVDPGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLDDDGTLDLDDLEELLTEK-- 164 (409)
T ss_pred ECCCCHHHHHHHHHHCCCCCHHHCCCCCEEEECCHHHHCCHHHHHHHHHHHCCEEEEEECCCCCEEEHHHHHHHHHCC--
T ss_conf 076027889999983110134253898879840111001214799999760987899744887605188899883269--
Q ss_pred CCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCC--CCCCCCCCCCCCCCC
Q ss_conf 024786079714621576613468999998631360898613112223477764011000013--465210013465653
Q gi|254780486|r 159 SGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEER--NNVIVMHSCSKALGS 236 (381)
Q Consensus 159 ~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~--~~~iv~~TlsKa~g~ 236 (381)
+++|.+=-|==..|.+-|+++|++++++||+.++||=|||.. +. ..+++ +-|+.+=|--|-+|-
T Consensus 165 -----TKlVa~~HvSNVlGtvnP~~ei~~~AH~~GA~vlvDGAQ~~p----H~-----pvDv~~ldcDFyvFSGHKmyGP 230 (409)
T TIGR01979 165 -----TKLVAITHVSNVLGTVNPVEEIIKLAHQVGAKVLVDGAQAVP----HM-----PVDVQALDCDFYVFSGHKMYGP 230 (409)
T ss_pred -----CEEEEEEEEECCCCCCCCHHHHHHHHHHCCCEEEEECCCCCC----CC-----CCCHHHHCCCEEEEECCHHHCC
T ss_conf -----829999742022030148789999986579769986255758----98-----9885655787445610045257
Q ss_pred EE-EEEECCCCCCCCCCCCCCCEE----------------CCC------CCCCCH--HHHHHHHHHHHHHC--CCHHHHH
Q ss_conf 02-675245100100001211000----------------013------577502--57898878988627--1022478
Q gi|254780486|r 237 SG-ALVGSNKIIYDYLINYAKPFI----------------YTT------SPSPIL--AVVACEALKLIKRK--PALHKSL 289 (381)
Q Consensus 237 ~G-G~i~~~~~ii~~l~~~~~~~i----------------fst------~l~P~~--~aaa~aal~~l~~~--~~~~~~l 289 (381)
+| |++.|++++-|.+ |||. |.. +.+|.. +.+.-+|+|.|++- +..+++.
T Consensus 231 tGiGVLYGK~~lLe~M----PPf~gGG~MI~~V~~~~g~ty~~~P~KFEAGTPniagviGLgaAidYl~~iG~~~I~~~E 306 (409)
T TIGR01979 231 TGIGVLYGKEELLEEM----PPFLGGGEMIEEVSLEEGTTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEKIGLEKIEAHE 306 (409)
T ss_pred CCCEEEHHHHHHHHHC----CCCCCCCCEEEEEEECCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_conf 6630112788988647----784669861578880577113678754568883589999999999998523878999999
Q ss_pred HHHHHHHHHHHHCCCCC----C----CCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEE--------CCCCCCCCCCEEE
Q ss_conf 99999999876417978----9----989728999589799999999999779189862--------2888888870399
Q gi|254780486|r 290 LQLINITDKIANKKIGF----S----SQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAI--------RPPTVPINTARLR 353 (381)
Q Consensus 290 ~~~~~~~~~~~~~~~g~----~----~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i--------~~PtVp~~~~rlR 353 (381)
.++..|..+....--++ + ....|+++.+.+ ..+-++..-|-++||-|+.- +|=-| .+..|
T Consensus 307 ~~L~~yal~~L~~ipg~~iyGP~~~~~R~g~isFn~~g-~HpHDVg~~LD~~GiAvR~GHHCAqPlm~~~~v---~atcR 382 (409)
T TIGR01979 307 KELTAYALERLGEIPGLRIYGPRDAEDRGGIISFNVEG-VHPHDVGTILDEEGIAVRSGHHCAQPLMRRFGV---PATCR 382 (409)
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCCCEEEECCCC-CCCCHHHHHCCCCCCEEEECCHHHHHHHHHCCC---CEEEE
T ss_conf 99999999996018985874687743264333302588-870022301226775686170532489865599---63678
Q ss_pred EECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 962878999999999999999988
Q gi|254780486|r 354 ISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 354 i~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
.++-..+|+||||+|+++|+++.+
T Consensus 383 ASf~~YNT~ediD~Lv~aL~~v~~ 406 (409)
T TIGR01979 383 ASFYLYNTEEDIDALVEALKKVRK 406 (409)
T ss_pred EEEEECCCHHHHHHHHHHHHHHHH
T ss_conf 874103898999999999999998
No 253
>PRK07671 cystathionine beta-lyase; Provisional
Probab=99.73 E-value=1.2e-15 Score=117.77 Aligned_cols=281 Identities=19% Similarity=0.189 Sum_probs=173.8
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHH-HCCHH--HHHH-HHHCCCCCEEECCCCHHHH
Q ss_conf 589999999984012888516741660245655666316897100454-20267--7526-6640876403056881478
Q gi|254780486|r 74 YNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDK-LVHAS--IREG-INSGKAQAIAIPHNNINSF 149 (381)
Q Consensus 74 ~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~-~~HaS--i~~g-~~ls~a~~~~f~HnD~~~L 149 (381)
++....||++||++-|.|+|++|+||..|-.+++. +.++||.|++-. ....+ +... .+--+.++..+.-.|.+.+
T Consensus 49 nPT~~~lE~~la~LEg~~~a~~~sSGmaAi~a~l~-~~~~Gd~iv~~~~~YggT~~l~~~~l~~~Gi~v~fvd~~d~~~~ 127 (377)
T PRK07671 49 NPTRAALEELIAVLENGHAGFAFGSGMAAITAVMM-LFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTTNLEEV 127 (377)
T ss_pred CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHH-HHCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEEECCCCHHHH
T ss_conf 86699999999998398627751678899999999-86899989982898277899999888636976999438886889
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCC
Q ss_conf 99764310002478607971462157661346899999863136089861311222347776401100001346521001
Q gi|254780486|r 150 AENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHS 229 (381)
Q Consensus 150 e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~T 229 (381)
++.++ +++.+|.+|+.-+-.-.++||++|+++|+++|+.++||-.-+..++ +..+ ....+|++.|
T Consensus 128 ~~ai~-------~~Tklv~~EspsNP~l~v~Di~~ia~iA~~~g~~~vVDNT~atP~~-------~~Pl-~~GaDivvhS 192 (377)
T PRK07671 128 EEAIR-------PNTKAIYVETPTNPLLKITDIKKISTLAKEKGLLTIVDNTFMTPYW-------QSPI-SLGADIVLHS 192 (377)
T ss_pred HHHCC-------CCCEEEEEECCCCCCCEECCHHHHHHHHHHCCCEEEECCCCCCCCC-------CCHH-HHCCCEEEEE
T ss_conf 96478-------8844999978999887501679999999982996985176422022-------7877-7288789994
Q ss_pred CCCCCCC----EEEE-EECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHH-C
Q ss_conf 3465653----0267-524510010000121100001357750257898878988627102-2478999999998764-1
Q gi|254780486|r 230 CSKALGS----SGAL-VGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINITDKIAN-K 302 (381)
Q Consensus 230 lsKa~g~----~GG~-i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~~~~~-~ 302 (381)
.+|-+++ .||+ +.+++++.+.++..... ....++|..+..++..|+.+.-+-++ .+...+.++++++--. .
T Consensus 193 ~TKyl~GHsD~~~G~vv~~~~~~~~~~~~~~~~--~G~~lsP~~a~L~lRGL~TL~lRm~r~~~nA~~vA~~L~~hp~V~ 270 (377)
T PRK07671 193 ATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNS--TGGILGPQDSFLLLRGLKTLGIRMEEHETNSRAIAEFLNNHPKVN 270 (377)
T ss_pred CCCEECCCCCCCCEEEEECCHHHHHHHHHHHHH--HCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 575304787752528996778999999999986--357788477789870688699999999999999999986199844
Q ss_pred C---CCC-------------CCCCCEEEEEECCHHHHHHHHHHHH--HCCEEE----EEECCCCC------C--------
Q ss_conf 7---978-------------9989728999589799999999999--779189----86228888------8--------
Q gi|254780486|r 303 K---IGF-------------SSQSHIQSIVIGDNKSCLNIAKNLQ--KKGFDI----RAIRPPTV------P-------- 346 (381)
Q Consensus 303 ~---~g~-------------~~~s~I~~v~~gd~~~a~~~~~~L~--~~Gi~v----~~i~~PtV------p-------- 346 (381)
. .|+ .+.+.++.+.+++.+.+.++.+.|. ..+.-. +-+..|+. |
T Consensus 271 ~V~yPgL~s~p~h~la~~~~~g~gg~~sf~l~~~~~a~~f~~~L~l~~~a~SlGg~eSLi~~Pa~~th~~~~~e~r~~~G 350 (377)
T PRK07671 271 KVYYPGLPSHPNHELAKEQANGFGGMISFDVGSEETLNKVLERLQYFTLAESLGAVESLISIPAQMTHASIPADRRKELG 350 (377)
T ss_pred EEECCCCCCCCHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCC
T ss_conf 99676888992599998558997559999938789999999808825450356877602138611155559999999759
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 887039996287899999999999999998
Q gi|254780486|r 347 INTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 347 ~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
.....||+++.. |+++.+++-|++.+
T Consensus 351 i~~~liRlSvGl----Ed~eDLi~DL~qAL 376 (377)
T PRK07671 351 ITDGLIRISVGI----EDGEDLIEDLAQAL 376 (377)
T ss_pred CCCCEEEEEECC----CCHHHHHHHHHHHC
T ss_conf 792959999332----99999999999854
No 254
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=99.72 E-value=1.8e-15 Score=116.53 Aligned_cols=289 Identities=20% Similarity=0.202 Sum_probs=172.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHH---HHHHHHHCCCCCEEEC
Q ss_conf 2244368858999999998401288851674166024565566631689710045420267---7526664087640305
Q gi|254780486|r 66 GSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHAS---IREGINSGKAQAIAIP 142 (381)
Q Consensus 66 ~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaS---i~~g~~ls~a~~~~f~ 142 (381)
=+|. | ++....||++||++-|.|.|++|+||..|..+++.+++++||.|++-...-.+ +.+-..--+.++..+
T Consensus 47 YsR~--g-nPT~~~le~~la~LEg~~~a~~~sSGmaAi~~~ll~~l~~Gd~il~~~~~Yg~t~~l~~~l~~~Gi~v~~~- 122 (384)
T PRK08574 47 YSRE--E-NPTVRPLEEKLAKLEGGVDALAFNSGMAAISTLFFSLLKAGDEVVLPMEAYGTTLRLLKSLEKFGVRVRLA- 122 (384)
T ss_pred EECC--C-CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEE-
T ss_conf 4389--8-86599999999998199718995587999999999816899989984897145999999998608579994-
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCC
Q ss_conf 68814789976431000247860797146215766134689999986313608986131122234777640110000134
Q gi|254780486|r 143 HNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERN 222 (381)
Q Consensus 143 HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~ 222 (381)
+.|.++..+.+. .++..+|.+|+.-+-...+.||++|+++|+++|+.++||-.-+..++ +..+ ...
T Consensus 123 ~~~~~~~~~~~~------~~~Tklv~~EspsNP~l~v~Di~~ia~iA~~~g~~~vvDNT~atP~~-------~~Pl-~~G 188 (384)
T PRK08574 123 YPSTEDLIEAIK------ESRTKLVFIETITNPTLRVIDVPEVAKAAKDLGAILVVDNTFATPIL-------YRPL-EHG 188 (384)
T ss_pred CCCCHHHHHHHC------CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHH-------CCHH-HHC
T ss_conf 899789999744------78854999988999876347859999999775985997377512642-------6806-648
Q ss_pred CCCCCCCCCCCCCC----EEEEE-ECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHH
Q ss_conf 65210013465653----02675-24510010000121100001357750257898878988627102-24789999999
Q gi|254780486|r 223 NVIVMHSCSKALGS----SGALV-GSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINIT 296 (381)
Q Consensus 223 ~~iv~~TlsKa~g~----~GG~i-~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~ 296 (381)
.+|++.|++|-+++ .||.+ ..++++.+.++...+ .....++|..+..++..++.+.-+-++ .+...+.++++
T Consensus 189 aDivvhS~TKyi~GHsdv~~G~vv~~~~~~~~~l~~~~~--~~G~~lsp~~a~l~~rgl~TL~lR~~~~~~nA~~lA~~L 266 (384)
T PRK08574 189 ADFVVHSLTKYIAGHNDVLGGVAVVWNGEFLEELWVWRR--RLGTIMQPFEAWLVLRGLKTLEVRFERQCENAMAIAEFL 266 (384)
T ss_pred CCEEEEECCCEECCCCCCEEEEEEECCHHHHHHHHHHHH--HHCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 988999546210388673413898351788999999999--828988923478886065879999999999999999999
Q ss_pred HHHHH-CC---CCCCC--------------CCCEEEEEE-CCHHHHHHHHHHHH--HCCEEE----EEECCCCCC-----
Q ss_conf 98764-17---97899--------------897289995-89799999999999--779189----862288888-----
Q gi|254780486|r 297 DKIAN-KK---IGFSS--------------QSHIQSIVI-GDNKSCLNIAKNLQ--KKGFDI----RAIRPPTVP----- 346 (381)
Q Consensus 297 ~~~~~-~~---~g~~~--------------~s~I~~v~~-gd~~~a~~~~~~L~--~~Gi~v----~~i~~PtVp----- 346 (381)
+.... .+ .|+++ -+.++.+.+ ++...+..+.+.|. ..+.-. +-+.+|+.-
T Consensus 267 ~~hp~V~~V~yPgl~shp~~~~a~~~~~g~~G~~~sf~l~~~~~~~~~f~~~L~lf~~~~SlGg~eSLi~~P~~~sh~~~ 346 (384)
T PRK08574 267 SEHPKVREVHYPGLPSDPYHEVAKRLFGDLYGGVVSFRVKGGRDAVLKFLRSLKLIFPSPSLGGVESIATYPVASAASPI 346 (384)
T ss_pred HCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHCCCCEECCCCCCCCCEEECCCCCCCCCC
T ss_conf 70999888989888999478999986799976499999729999999999828857343164754222247310367559
Q ss_pred ---------CCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf ---------8870399962878999999999999999
Q gi|254780486|r 347 ---------INTARLRISITLNVDEPTIVKLFDILPQ 374 (381)
Q Consensus 347 ---------~~~~rlRi~v~a~~t~edi~~~~~~l~~ 374 (381)
.....||+++...+.++-|+.+..+|+.
T Consensus 347 ~~e~r~~~Gi~~~liRlSvGlEd~~DLi~DL~~AL~~ 383 (384)
T PRK08574 347 PEEDRKILGITEDLVRLSVGLEDVEDLIEDLDQALNS 383 (384)
T ss_pred CHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHC
T ss_conf 9999997298939499994109999999999999834
No 255
>PRK08064 cystathionine beta-lyase; Provisional
Probab=99.72 E-value=1.4e-15 Score=117.26 Aligned_cols=286 Identities=16% Similarity=0.175 Sum_probs=177.2
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHC-CHH--HHHH-HHHCCCCCEEECCCCHHHH
Q ss_conf 58999999998401288851674166024565566631689710045420-267--7526-6640876403056881478
Q gi|254780486|r 74 YNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLV-HAS--IREG-INSGKAQAIAIPHNNINSF 149 (381)
Q Consensus 74 ~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~-HaS--i~~g-~~ls~a~~~~f~HnD~~~L 149 (381)
++....||+++|++-|.|.|++|+||..|-.+++. +..+||.|++-... ..+ +... ..--+.++..+.-+|.+++
T Consensus 53 nPT~~~Le~~la~LE~~~~a~~~~SGmaAi~~~l~-~l~~Gd~vv~~~~~Yg~T~~l~~~~l~~~Gi~~~f~d~~d~~~~ 131 (390)
T PRK08064 53 NPTREALEDIIAELEGGTKGFAFASGMAAISTAFL-LLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLEEV 131 (390)
T ss_pred CHHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHH-HHCCCCEEEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCHHHH
T ss_conf 86699999999998299765502339999999999-86799999984888567999998676509879999788573779
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCC
Q ss_conf 99764310002478607971462157661346899999863136089861311222347776401100001346521001
Q gi|254780486|r 150 AENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHS 229 (381)
Q Consensus 150 e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~T 229 (381)
++.++. ++.+|..|+.-+-...++|+++|+++|+++|+.++||..-+..++ +..+. ...+|++.+
T Consensus 132 ~~~i~~-------~Tklv~~EspsNP~l~v~Di~~i~~iA~~~g~~~vVDNT~atP~~-------~~Pl~-~GaDivihS 196 (390)
T PRK08064 132 AQNIKP-------NTKLFYVETPSNPLLKVTDIRGVVKLAKAHGCLTFVDNTFLTPLL-------QKPLD-LGADVVLHS 196 (390)
T ss_pred HHHCCC-------CCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCCCC-------CCHHH-HCCCEEEEE
T ss_conf 974788-------845999978999887412719999999883996997377335043-------68577-488699996
Q ss_pred CCCCCCC----EEEE-EECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHH-C
Q ss_conf 3465653----0267-524510010000121100001357750257898878988627102-2478999999998764-1
Q gi|254780486|r 230 CSKALGS----SGAL-VGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINITDKIAN-K 302 (381)
Q Consensus 230 lsKa~g~----~GG~-i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~~~~~-~ 302 (381)
++|-+++ .||. +..++++.+.++..... +...++|..+..++..++.+.-+-++ .+...+.+++++.... .
T Consensus 197 ~TKyi~Ghsd~l~G~vv~~~~~~~~~~~~~~~~--~G~~l~p~~a~l~lrgl~TL~lRm~~~~~nA~~iA~~L~~hp~V~ 274 (390)
T PRK08064 197 ATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNS--FGAVLGVQDCWLVLRGLKTLHVRLEHSAATANKIAQYLQEHPKVQ 274 (390)
T ss_pred CCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHH--CCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 363115887640416861788999999999985--077679056789872568688999999999999999997199906
Q ss_pred C---CCC-------------CCCCCEEEEEECCHHHHHHHHHHHHH--CCEEE----EEECCCCC------C--------
Q ss_conf 7---978-------------99897289995897999999999997--79189----86228888------8--------
Q gi|254780486|r 303 K---IGF-------------SSQSHIQSIVIGDNKSCLNIAKNLQK--KGFDI----RAIRPPTV------P-------- 346 (381)
Q Consensus 303 ~---~g~-------------~~~s~I~~v~~gd~~~a~~~~~~L~~--~Gi~v----~~i~~PtV------p-------- 346 (381)
. .|+ .+.+.++.+.+++...+..+.+.|.= .++-. +-+.+|+. |
T Consensus 275 ~V~yPgL~s~p~h~l~~~~~~g~Gg~~sf~l~~~~~~~~f~~~l~l~~~a~SlGg~eSLi~~p~~~th~~~~~e~~~~~G 354 (390)
T PRK08064 275 NVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSEEAVRQFVSKVKLPVFAVSLGAVESILSYPAKMSHAAMPKEERDERG 354 (390)
T ss_pred EEECCCCCCCCCHHHHHHCCCCCCEEEEEEECCHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCCCCCCCCHHHHHHCC
T ss_conf 79898999991499999628997149999989999999999838826221163774441047622466348999999759
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 8870399962878999999999999999988
Q gi|254780486|r 347 INTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 347 ~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
.....||+++...+.++-|+.+-.+|+++-+
T Consensus 355 i~~~liRlSvGlE~~~DLi~DL~qAL~~i~~ 385 (390)
T PRK08064 355 ITDGLLRLSVGLENVDDLIADFEQALSYVEE 385 (390)
T ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf 8939499996008999999999999997331
No 256
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=7.5e-15 Score=112.73 Aligned_cols=290 Identities=15% Similarity=0.150 Sum_probs=172.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHH---HHHH-HHHCCCCCEE
Q ss_conf 72244368858999999998401288851674166024565566631689710045420267---7526-6640876403
Q gi|254780486|r 65 GGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHAS---IREG-INSGKAQAIA 140 (381)
Q Consensus 65 ~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaS---i~~g-~~ls~a~~~~ 140 (381)
.=+|. | ++...+||++||++-|.++|++|+||..|-.+++.+++++||+|++-...-.. +.+. ..--+.++..
T Consensus 62 ~YsR~--g-NPT~~~LE~~la~LEg~~~a~~~sSGmaAi~~~ll~ll~~Gdhiv~~~~~YggT~~l~~~~l~~~Gi~v~f 138 (436)
T PRK07812 62 IYTRI--M-NPTQDVVEQRIAALEGGVAALFLASGQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSF 138 (436)
T ss_pred EECCC--C-CHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEE
T ss_conf 42089--8-86699999999998299878996479999999999961889889994886687899999997652874169
Q ss_pred E-CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHH
Q ss_conf 0-568814789976431000247860797146215766134689999986313608986131122234777640110000
Q gi|254780486|r 141 I-PHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIE 219 (381)
Q Consensus 141 f-~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~ 219 (381)
+ .-+|++.+++.++ +++.+|.+|+.-+-.-.+.||++|.++|+++|+.++||-.-+..++ +..+
T Consensus 139 v~d~~d~~~~~~~i~-------~~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~-------~~Pl- 203 (436)
T PRK07812 139 VEDPDDLDSWRAAVR-------PNTKAFFAETISNPQIDILDIPGVAEVAHEAGVPLIVDNTIATPYL-------IRPL- 203 (436)
T ss_pred ECCCCCHHHHHHHCC-------CCCEEEEEECCCCCCEECCCHHHHHHHHHHCCCEEEEECCCCCCCC-------CCCC-
T ss_conf 679988999997458-------6743999964899860523669999999985992996268646230-------3764-
Q ss_pred CCCCCCCCCCCCCCCCC----EEEEEECCCC--CCC----------------------------CCCC-CCCCEECCCCC
Q ss_conf 13465210013465653----0267524510--010----------------------------0001-21100001357
Q gi|254780486|r 220 ERNNVIVMHSCSKALGS----SGALVGSNKI--IYD----------------------------YLIN-YAKPFIYTTSP 264 (381)
Q Consensus 220 ~~~~~iv~~TlsKa~g~----~GG~i~~~~~--ii~----------------------------~l~~-~~~~~ifst~l 264 (381)
....+|++.|.+|-+++ .||.|+.+.. +.. ..+. ..+ -+...+
T Consensus 204 ~~GaDivihS~TKyi~GHsDvlgG~vv~~~~~~w~~~r~~~~~~~d~~~~~~~~~~l~~~~~~~~~r~~~~r--~~G~~l 281 (436)
T PRK07812 204 EHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSYHGVVFAELGPPAYALKARVQLLR--DLGSAA 281 (436)
T ss_pred CCCCCEEEEECCEECCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHHHHCCHHHHCCCHHHHHHHHHHHHH--HCCCCC
T ss_conf 148988999645031589770436998457554000236565778757614157641548899999999986--411135
Q ss_pred CCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHH-CC---CCC--------------CCCCCEEEEEE-CCHHHHH
Q ss_conf 750257898878988627102-2478999999998764-17---978--------------99897289995-8979999
Q gi|254780486|r 265 SPILAVVACEALKLIKRKPAL-HKSLLQLINITDKIAN-KK---IGF--------------SSQSHIQSIVI-GDNKSCL 324 (381)
Q Consensus 265 ~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~~~~~-~~---~g~--------------~~~s~I~~v~~-gd~~~a~ 324 (381)
+|..+..++..|+.|.-+-++ .+...+++++++.--. .. .|+ .+.+.++.+.+ ++...+.
T Consensus 282 sP~da~L~lRGL~TL~lRm~r~~~nA~~iA~~L~~hp~V~~V~yPgL~shp~h~la~~~~~~G~G~~~sf~l~g~~~~~~ 361 (436)
T PRK07812 282 SPFNAFLIAQGLETLSLRIERHVANAQRVAEFLAARDDVLSVNYAGLPSSPWYERAKRLAPKGTGAVLSFELAGGVEAGK 361 (436)
T ss_pred CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEEECCHHHHH
T ss_conf 80777898736683899999999999999999960999668989898888388999986899972799999809899999
Q ss_pred HHHHHHH--HCCEEE----EEECCCCCC--------------CCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 9999999--779189----862288888--------------8870399962878999999999999999
Q gi|254780486|r 325 NIAKNLQ--KKGFDI----RAIRPPTVP--------------INTARLRISITLNVDEPTIVKLFDILPQ 374 (381)
Q Consensus 325 ~~~~~L~--~~Gi~v----~~i~~PtVp--------------~~~~rlRi~v~a~~t~edi~~~~~~l~~ 374 (381)
++.+.|. ..+.-. +-+.+|+.- .....||+++...+.++-|+.+-.+|+.
T Consensus 362 ~f~~~L~lf~~a~SlGg~eSLi~~Pa~~th~~~~~e~r~~~Gi~~~liRlSVGlEd~eDLi~DL~qAL~a 431 (436)
T PRK07812 362 AFVNALTLHSHVANIGDVRSLVIHPASTTHAQLTPEEQLATGVTPGLVRLAVGIEGIDDILADLEAGFAA 431 (436)
T ss_pred HHHHCCCCCCEEECCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 9998089550104777366154677545643289999986598949599995109999999999999997
No 257
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=99.72 E-value=2.3e-15 Score=115.91 Aligned_cols=287 Identities=17% Similarity=0.183 Sum_probs=176.0
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHH-CCHH--HHHH-HHHCCCCCEEECCCCHHHH
Q ss_conf 5899999999840128885167416602456556663168971004542-0267--7526-6640876403056881478
Q gi|254780486|r 74 YNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKL-VHAS--IREG-INSGKAQAIAIPHNNINSF 149 (381)
Q Consensus 74 ~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~-~HaS--i~~g-~~ls~a~~~~f~HnD~~~L 149 (381)
++....||++||++-|.++|++|+||..|-.+++.+++++||+|++-.. ...+ +.+. .+..+..+..+.-.|++.+
T Consensus 59 NPT~~~lE~~lA~LEgg~~a~~~sSGmaAi~~~l~~ll~~GDhiv~~~~~YGgT~~l~~~~~~~~gi~~~~vd~~d~~~~ 138 (405)
T PRK08776 59 NPTRDLLGEALAELEGGAGGVITSTGMGAINLVLNALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRSL 138 (405)
T ss_pred CHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEECCCCHHHH
T ss_conf 87899999999998299968994679999999999973899989986886117999999987548889999689998999
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCC
Q ss_conf 99764310002478607971462157661346899999863136089861311222347776401100001346521001
Q gi|254780486|r 150 AENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHS 229 (381)
Q Consensus 150 e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~T 229 (381)
++.++. ++.+|.+|+.-+-.-.+.|+++|.++|+++|++++||-.-+..++ +..+ ....+|++.+
T Consensus 139 ~~~i~~-------~Tklv~~EtpsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~-------~~Pl-~~GaDivihS 203 (405)
T PRK08776 139 ADALAQ-------SPKLVLIETPSNPLLRITDLRFVIEAAHKVGALTVVDNTFLSPAL-------QKPL-EFGADLVLHS 203 (405)
T ss_pred HHHCCC-------CCEEEEEECCCCCCCEEECCHHHHHHHHHCCCEEEEECCCCCCCC-------CCHH-HHCCCEEEEE
T ss_conf 974377-------765999988999988602759999999873997999799764002-------6826-5279789997
Q ss_pred CCCCCCC----EEEEEECC-CCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHH-C
Q ss_conf 3465653----02675245-10010000121100001357750257898878988627102-2478999999998764-1
Q gi|254780486|r 230 CSKALGS----SGALVGSN-KIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINITDKIAN-K 302 (381)
Q Consensus 230 lsKa~g~----~GG~i~~~-~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~~~~~-~ 302 (381)
.+|-+++ .||.|+++ +++.+.++.... .+...++|..+..++..|+.+.-+-++ .+...+++++++..-. .
T Consensus 204 ~TKyl~GHsDvl~G~vv~~~~~~~~~l~~~~~--~~G~~~sP~da~L~lRGLkTL~lRm~r~~~nA~~lA~~L~~hp~V~ 281 (405)
T PRK08776 204 TTKYINGHSDVVGGAVVARDAALHQQLVWWAN--ALGLTGSPFDAFLTLRGLRTLDARLRVHQENADAIAALLDGHAAVN 281 (405)
T ss_pred CCEEECCCCCCCCCCCCCCCHHHHHHHHHHHH--HCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 26043278653056222688899999999998--6088888335788864578899999999999999999997098968
Q ss_pred C---CCC-------------CCCCCEEEEEECC-HHHHHHHHHHHH--HCCEEE----EEECCCCCC-------------
Q ss_conf 7---978-------------9989728999589-799999999999--779189----862288888-------------
Q gi|254780486|r 303 K---IGF-------------SSQSHIQSIVIGD-NKSCLNIAKNLQ--KKGFDI----RAIRPPTVP------------- 346 (381)
Q Consensus 303 ~---~g~-------------~~~s~I~~v~~gd-~~~a~~~~~~L~--~~Gi~v----~~i~~PtVp------------- 346 (381)
+ .|+ .+.+.++.+.+.. ...+..+.+.|. ..++-. +-+.+|+.-
T Consensus 282 ~V~YPgL~shp~h~la~r~~~G~Ggm~Sf~l~~~~~~~~~f~d~l~lf~~a~SlGg~eSLi~~P~~~th~~~~~e~r~~~ 361 (405)
T PRK08776 282 QVYFPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRAFVDGLRYFTLAESLGGVESLIAHPASMTHAAMTAEARAAA 361 (405)
T ss_pred EEECCCCCCCCCHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHCCCCEEEECCCCCCCEEECCCCCCCCCCCHHHHHHC
T ss_conf 68898888981678998648998652688845739999999980883625215376541302775446645899999866
Q ss_pred -CCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf -8870399962878999999999999999988
Q gi|254780486|r 347 -INTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 347 -~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
.....||+++.....++-|+.+-.+|++..+
T Consensus 362 Gi~~~liRlSvGlEd~~DLi~DL~qAL~~a~a 393 (405)
T PRK08776 362 GISDGLLRLSVGIESAEDLLIDLRAGLARAEA 393 (405)
T ss_pred CCCCCEEEEEEECCCHHHHHHHHHHHHHHHHH
T ss_conf 98939699995009999999999999999998
No 258
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.72 E-value=3.5e-15 Score=114.80 Aligned_cols=293 Identities=17% Similarity=0.163 Sum_probs=176.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCH-HHHCCHH--HHHH-HHHCCCCCEE
Q ss_conf 7224436885899999999840128885167416602456556663168971004-5420267--7526-6640876403
Q gi|254780486|r 65 GGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVY-DKLVHAS--IREG-INSGKAQAIA 140 (381)
Q Consensus 65 ~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~-D~~~HaS--i~~g-~~ls~a~~~~ 140 (381)
.=||. | ++....||++||++-|.++|++|+||..|-.+++.+++++||+|++ |.....+ +... .+--+.++..
T Consensus 57 ~YsR~--g-nPT~~~lE~~la~LEg~~~a~~~sSGmaAis~~ll~ll~~Gdhiv~~~~~YggT~~l~~~~l~~~Gi~v~~ 133 (431)
T PRK08248 57 IYTRI--M-NPTNDVFEKRIAALEGGVGALAVSSGQAAVTYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKF 133 (431)
T ss_pred EEECC--C-CHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEE
T ss_conf 33189--8-86799999999998399848995469999999999973779989972786488899987423238879999
Q ss_pred ECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHC
Q ss_conf 05688147899764310002478607971462157661346899999863136089861311222347776401100001
Q gi|254780486|r 141 IPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEE 220 (381)
Q Consensus 141 f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~ 220 (381)
|.-+|.+++++.++ +++.+|.+|+.-+-.-.+.|+++|.++|+++|+.++||-.-+..++ +..+ .
T Consensus 134 vD~~d~~~~~~~i~-------~~Tkli~~EsPsNP~l~v~Di~~ia~iA~~~g~~~vVDNTfatP~~-------~~Pl-~ 198 (431)
T PRK08248 134 VDPSDPENFEAAIT-------DKTKALFAETIGNPKGDVLDIEAVADIAHRHHIPLIVDNTFASPYL-------LRPI-E 198 (431)
T ss_pred ECCCCHHHHHHHCC-------CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCHHH-------CCHH-H
T ss_conf 89977577997537-------7745999604899987422789999999776985998667530321-------5834-5
Q ss_pred CCCCCCCCCCCCCCCC----EEEEEECCCCC--CCCCCC------------------CC-CCE----------ECCCCCC
Q ss_conf 3465210013465653----02675245100--100001------------------21-100----------0013577
Q gi|254780486|r 221 RNNVIVMHSCSKALGS----SGALVGSNKII--YDYLIN------------------YA-KPF----------IYTTSPS 265 (381)
Q Consensus 221 ~~~~iv~~TlsKa~g~----~GG~i~~~~~i--i~~l~~------------------~~-~~~----------ifst~l~ 265 (381)
...+|++.|.+|-+++ .||.|+++... .+.-|. .+ ..+ -+...++
T Consensus 199 ~GaDivvhS~TKYi~GHsDvlgG~vv~~~~~~w~~~~r~~~~~~~d~~~~~~~~~~~~g~~~~~~~~r~~~~~~~G~~~s 278 (431)
T PRK08248 199 FGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWAGSGKFPGLTEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALS 278 (431)
T ss_pred HCCCEEEEECCEECCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 28988999665123688753547997067544000234532357865533532687661789999999999985277788
Q ss_pred CCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHC-C---CCC--------------CCCCCEEEEEE-CCHHHHHH
Q ss_conf 50257898878988627102-24789999999987641-7---978--------------99897289995-89799999
Q gi|254780486|r 266 PILAVVACEALKLIKRKPAL-HKSLLQLINITDKIANK-K---IGF--------------SSQSHIQSIVI-GDNKSCLN 325 (381)
Q Consensus 266 P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~~~~~~-~---~g~--------------~~~s~I~~v~~-gd~~~a~~ 325 (381)
|..+..++..|+.|.-+-++ .+...++++++++--.. . .|+ .+.+.++.+.+ ++...+.+
T Consensus 279 p~da~L~lRGLrTL~lRm~r~~~nA~~lA~~L~~hp~V~~V~yPgL~shp~h~la~~~~~~g~G~~~sf~l~~~~~~~~~ 358 (431)
T PRK08248 279 PFNAFLLLQGLETLHLRMERHSENALAVAKFLEEHPAVESVSYPGLPSHPSYELAKKYLPKGQGAILTFEIKGGVEAGKK 358 (431)
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCHHHHHH
T ss_conf 06779997268979999999998899999999848995779899999995899999867999606999997288999999
Q ss_pred HHHHHH--HCCEEE----EEECCCCCC--------------CCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 999999--779189----862288888--------------88703999628789999999999999999
Q gi|254780486|r 326 IAKNLQ--KKGFDI----RAIRPPTVP--------------INTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 326 ~~~~L~--~~Gi~v----~~i~~PtVp--------------~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
+.+.|. ..+.-. +-+.+|+.- .....||+++...+.++-|+.+-.+|++.
T Consensus 359 f~~~L~lf~~a~SlGg~eSLi~~pa~~th~~~~~~~r~~~Gi~~~liRlSVGlEd~eDLi~DL~qAL~~a 428 (431)
T PRK08248 359 LIDSVKLFSHLANVGDSKSLIIHPASTTHEQLSEEEQRAAGVTPGLVRLSVGTESIDDIIEDLRQAIEQS 428 (431)
T ss_pred HHHHCCCCEECCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf 9983783611326676571645764355210899999866979495999941099999999999999972
No 259
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.71 E-value=5.1e-15 Score=113.78 Aligned_cols=294 Identities=16% Similarity=0.130 Sum_probs=179.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHH---HHHH-HHHCCCCCEE
Q ss_conf 72244368858999999998401288851674166024565566631689710045420267---7526-6640876403
Q gi|254780486|r 65 GGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHAS---IREG-INSGKAQAIA 140 (381)
Q Consensus 65 ~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaS---i~~g-~~ls~a~~~~ 140 (381)
.=+|. | ++....||++||++-|.++|++|+||..|-.+++.+++++||.|++-...-.. +.+. ..--+.++..
T Consensus 57 ~YsR~--g-NPT~~~LE~~la~LEgg~~a~~~sSGmaAis~~l~~ll~~Gd~iv~~~~~YggT~~l~~~~l~~~Gi~~~~ 133 (433)
T PRK08134 57 VYSRI--S-NPTTAVLEERVAALEGGVGAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLPRFGIETTF 133 (433)
T ss_pred EECCC--C-CHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEECCCEECCHHHHHHHHHHHCCEEEEE
T ss_conf 01499--8-86699999999998099827985388999999999748999989971880773799999877634837999
Q ss_pred ECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHC
Q ss_conf 05688147899764310002478607971462157661346899999863136089861311222347776401100001
Q gi|254780486|r 141 IPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEE 220 (381)
Q Consensus 141 f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~ 220 (381)
+..+|++++++.++ +++.+|.+|+.-+-.-.+.||++|.++|+++|+.++||-.-+..++ +..+ .
T Consensus 134 vd~~d~~~~~~~i~-------~~Tklv~~EspsNP~l~v~Di~aia~iA~~~g~~~vVDNT~atP~~-------~~Pl-~ 198 (433)
T PRK08134 134 VKPRDIDGWRAAIR-------PNTRLLFGETLGNPGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYL-------LRPF-E 198 (433)
T ss_pred ECCCCHHHHHHHCC-------CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHH-------CCHH-H
T ss_conf 88978467887559-------8752899853899975035899999999756761997166511530-------5805-5
Q ss_pred CCCCCCCCCCCCCCCC----EEEEEECCCC--CC---------CCCC-----------------CCCCC---EECCCCCC
Q ss_conf 3465210013465653----0267524510--01---------0000-----------------12110---00013577
Q gi|254780486|r 221 RNNVIVMHSCSKALGS----SGALVGSNKI--IY---------DYLI-----------------NYAKP---FIYTTSPS 265 (381)
Q Consensus 221 ~~~~iv~~TlsKa~g~----~GG~i~~~~~--ii---------~~l~-----------------~~~~~---~ifst~l~ 265 (381)
...+|++.|.+|-+++ .||.|+.+.. +. +... .+.+. .-+...++
T Consensus 199 ~GaDivvhS~TKYl~GHsDvlgG~vv~~~~~~w~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~r~~~~~lr~~G~~ls 278 (433)
T PRK08134 199 HGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPELTEPYAGFHGMVFDEESTVAAFLLRARREGLRDFGACLS 278 (433)
T ss_pred HCCCEEEEECCEEECCCCCEEEEEEECCCCCCHHHCCCCHHHHCCHHHHCCCHHHHHHCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 28988999654672588754778985165201655044166637615430404665404789999999998764276668
Q ss_pred CCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHH-CC---CCC--------------CCCCCEEEEEE-CCHHHHHH
Q ss_conf 50257898878988627102-2478999999998764-17---978--------------99897289995-89799999
Q gi|254780486|r 266 PILAVVACEALKLIKRKPAL-HKSLLQLINITDKIAN-KK---IGF--------------SSQSHIQSIVI-GDNKSCLN 325 (381)
Q Consensus 266 P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~~~~~-~~---~g~--------------~~~s~I~~v~~-gd~~~a~~ 325 (381)
|..+.-++..|+.|.-+-++ .+...+++++++..-. .. .++ .+.+.++.+.+ ++...+.+
T Consensus 279 p~da~L~lRGL~TL~lRm~r~~~nA~~lA~~L~~hp~V~~V~yPgL~s~p~h~la~r~~~~G~Gg~~sf~l~g~~~~~~~ 358 (433)
T PRK08134 279 PMNAWQLLQGIETLPLRMERHVANTRAVVEFLASHPAVERVAHPELESHPDHALAKRLLPRGAGSVFSFDLKGGRAAGRK 358 (433)
T ss_pred HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEEECCHHHHHH
T ss_conf 36779987367768999999998799999999858996789898989980299999878999658999999699999999
Q ss_pred HHHHHH--HCCEEE----EEECCCCCC--------------CCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 999999--779189----862288888--------------887039996287899999999999999998
Q gi|254780486|r 326 IAKNLQ--KKGFDI----RAIRPPTVP--------------INTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 326 ~~~~L~--~~Gi~v----~~i~~PtVp--------------~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
+.+.|. ..+.-. +-+.+|+.- .....||+++...+.++-|+.+-.+|+..-
T Consensus 359 f~~~l~lf~~a~SlGg~eSLi~~Pa~~th~~~~~e~~~~~Gi~~~lvRlSvGlEd~eDLi~DL~qAL~aa~ 429 (433)
T PRK08134 359 FIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGIGEGTIRLSIGLEDADDLIDDLKRALKAAE 429 (433)
T ss_pred HHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHH
T ss_conf 99838813012266875303467632346358999998669893949999411999999999999999988
No 260
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level HMM (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.71 E-value=2.4e-14 Score=109.60 Aligned_cols=282 Identities=16% Similarity=0.185 Sum_probs=175.0
Q ss_pred CHHHHHHHHHHHHHCCCCC---EEEE-CCCCHHHHHHHHHHCCCCCCCCHHHHCCHH--HHHHHHHCCCCCEEECC----
Q ss_conf 5899999999840128885---1674-166024565566631689710045420267--75266640876403056----
Q gi|254780486|r 74 YNQHLELEEEAADFFGFEK---MLYF-GSGYAANMAILSTLPQATDLIVYDKLVHAS--IREGINSGKAQAIAIPH---- 143 (381)
Q Consensus 74 ~~~~~~lE~~lA~~~g~e~---al~~-~sG~~An~~~i~~l~~~~d~ii~D~~~HaS--i~~g~~ls~a~~~~f~H---- 143 (381)
.+++.++++.|-++++.++ ++++ .||+.+..+++..+..+++-+++=..-..| ..+-++..+.++..+..
T Consensus 30 ~~i~~~~~~~L~~l~~~~~~~~v~~l~gsGt~a~Ea~~~nl~~~g~~vlv~~~G~fg~r~~~~a~~~g~~~~~~~~~~g~ 109 (355)
T TIGR03301 30 NDVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGERLAKICEYLGIPHTDLNFSEYE 109 (355)
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf 99999999989999589998479999165599999999852367987999954889999999999829966997368877
Q ss_pred -CCHHHHHHHHHHHHHCCCCCCCEEE--ECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHC
Q ss_conf -8814789976431000247860797--1462157661346899999863136089861311222347776401100001
Q gi|254780486|r 144 -NNINSFAENINKWRKSGGKGFPWIV--VESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEE 220 (381)
Q Consensus 144 -nD~~~Le~~l~~~~~~~~~~~~~vv--~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~ 220 (381)
-|++++++.|++.. +-..+.+ .|.. .|..-|+++|.++|++||++++||-+.++|. +.+..
T Consensus 110 ~~~~~~v~~~l~~~~----~~~~v~~~h~ETs---tGv~~~~~~i~~~~~~~~~llvVDavSs~g~---------~p~d~ 173 (355)
T TIGR03301 110 PPDLNRIEEALAADP----DITHVATVHHETT---TGILNPLEAIAKVARSHGAVLIVDAMSSFGA---------IPIDI 173 (355)
T ss_pred CCCHHHHHHHHHCCC----CCCEEEEEEECCC---CCCCCCHHHHHHHHCCCCCEEEEECCCCCCC---------CCCCC
T ss_conf 899899999972577----8548999501267---8741753766566504796499974564356---------86420
Q ss_pred C--CCCCCCCCCCCCC-CCEE-EEEECCCCCCCCCCCCCCCEEC-------------CC--CCCCCHHHHHHHHHHHHHH
Q ss_conf 3--4652100134656-5302-6752451001000012110000-------------13--5775025789887898862
Q gi|254780486|r 221 R--NNVIVMHSCSKAL-GSSG-ALVGSNKIIYDYLINYAKPFIY-------------TT--SPSPILAVVACEALKLIKR 281 (381)
Q Consensus 221 ~--~~~iv~~TlsKa~-g~~G-G~i~~~~~ii~~l~~~~~~~if-------------st--~l~P~~~aaa~aal~~l~~ 281 (381)
. +.++++++=-|++ |..| +++..+++.++..+...+++.+ ++ .+|.....+..++|+.+.+
T Consensus 174 ~~~gvD~~~~~sQK~l~~ppGl~~v~~~~~~~~~~~~~~~~~y~dl~~~~~~~~~~g~~~~Tppv~~i~al~~al~~i~~ 253 (355)
T TIGR03301 174 EELDVDALIASANKCLEGVPGFGFVIARRDLLEASAGNARSLYLDLYDQWAYMEKTGKWRFTPPTHTVYAFAQALEELEA 253 (355)
T ss_pred CCCCEEEEEECCCCCCCCCCCEEEEEECHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 11565899953655567888757888669999751379876663589999886347987878854999999999999997
Q ss_pred CCC---HHHHHHHHHHHHHHHHHCCCCCC------CCCC-EEEEEECCHH--HHHHHHHHHHHCCEEEEEECCCCCCCCC
Q ss_conf 710---22478999999998764179789------9897-2899958979--9999999999779189862288888887
Q gi|254780486|r 282 KPA---LHKSLLQLINITDKIANKKIGFS------SQSH-IQSIVIGDNK--SCLNIAKNLQKKGFDIRAIRPPTVPINT 349 (381)
Q Consensus 282 ~~~---~~~~l~~~~~~~~~~~~~~~g~~------~~s~-I~~v~~gd~~--~a~~~~~~L~~~Gi~v~~i~~PtVp~~~ 349 (381)
+-. +.++-++..+.... ....+|+. ..|+ ++++.++++. ...++.+.|.++|+.+.+-..+ .+
T Consensus 254 eGGl~~~~~r~~~~a~~l~~-~l~~lgl~~~~~~~~~s~~vt~~~~p~~~~~d~~~~~~~l~~~g~~i~~G~~~---~~- 328 (355)
T TIGR03301 254 EGGVPARIARYRRNRELLVD-GLRALGFQPLLPERWQSPIIVSFLYPDDPDFDFDDFYQELKERGFVIYPGKLT---LA- 328 (355)
T ss_pred CCCHHHHHHHHHHHHHHHHH-HHHHCCCCCCCCHHHCCCCEEEEECCCCCCCCHHHHHHHHHHCCEEEECCCCC---CC-
T ss_conf 23799999999999999999-99986994358915649866999889988857999999999779078578767---79-
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 039996287899999999999999998
Q gi|254780486|r 350 ARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 350 ~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
..+||..--..+.+||++++++|++++
T Consensus 329 ~~fRig~mG~~~~~dv~~ll~~le~~L 355 (355)
T TIGR03301 329 DTFRIGTIGEIDAADIERLLEAIKDAL 355 (355)
T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHC
T ss_conf 989898189999999999999999769
No 261
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.71 E-value=5.7e-15 Score=113.45 Aligned_cols=291 Identities=21% Similarity=0.208 Sum_probs=176.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHC-CHH--HHHH-HHHCCCCCEE
Q ss_conf 72244368858999999998401288851674166024565566631689710045420-267--7526-6640876403
Q gi|254780486|r 65 GGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLV-HAS--IREG-INSGKAQAIA 140 (381)
Q Consensus 65 ~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~-HaS--i~~g-~~ls~a~~~~ 140 (381)
.=||. | ++....||++||++-|.+.|++|+||..|-..++.+++++||.|++-... ..+ +.+. ..--+.++..
T Consensus 51 ~YsR~--g-nPT~~~LE~~la~LEg~~~a~~~~SGMaAIs~~ll~ll~~Gd~iv~~~~~Yggt~~l~~~~l~~~gi~~~f 127 (424)
T PRK06084 51 IYTRI--M-NPTNDVLEQRVAALEGGVGALAVASGMAAITYAIQTVAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIQTRF 127 (424)
T ss_pred EECCC--C-CHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHCCCEEEE
T ss_conf 21199--8-86799999999998599848995478999999999841899989982798563899999988746861599
Q ss_pred ECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHC
Q ss_conf 05688147899764310002478607971462157661346899999863136089861311222347776401100001
Q gi|254780486|r 141 IPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEE 220 (381)
Q Consensus 141 f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~ 220 (381)
+.++|.+.+++.++. ++.+|.+|+.-+-...+.|+++|+++|+++|++++||..-+..++ +..+ .
T Consensus 128 vd~~d~~~~~~~i~~-------~Tklv~~EsP~NPtl~v~DI~~i~~iA~~~g~~~vVDNT~atP~~-------~~Pl-~ 192 (424)
T PRK06084 128 AAHDDIAALEALIDE-------RTKAVFCESIGNPAGNIVDLQALADAAHRHGVPLIVDNTVATPVL-------CRPF-E 192 (424)
T ss_pred ECCCCHHHHHHHCCC-------CCEEEEEECCCCCCCEECCHHHHHHHHHHCCCEEEEECCCCCCCC-------CCHH-H
T ss_conf 588677999975487-------651899843899986503789999999874995995457635232-------6804-5
Q ss_pred CCCCCCCCCCCCCCCC----EEEEEECCCCC--CC------CCCC-------------CCC-CE----------ECCCCC
Q ss_conf 3465210013465653----02675245100--10------0001-------------211-00----------001357
Q gi|254780486|r 221 RNNVIVMHSCSKALGS----SGALVGSNKII--YD------YLIN-------------YAK-PF----------IYTTSP 264 (381)
Q Consensus 221 ~~~~iv~~TlsKa~g~----~GG~i~~~~~i--i~------~l~~-------------~~~-~~----------ifst~l 264 (381)
...+|++.|++|-+++ .||.|+++.+. .+ .++. .++ .+ -....+
T Consensus 193 ~GaDivvhS~TKYi~GHsDvl~G~vi~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~g~~~~i~~~r~~~~~~~G~~l 272 (424)
T PRK06084 193 HGADIVVHSLTKYMGGHGTSIGGIVVDSGKFPWAENKERFALLNTPDPSYHGVTYTEAFGPAAFIGRCRVVPLRNMGAAL 272 (424)
T ss_pred HCCCEEEEECCEECCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 28988999665220588760367897166114767677767753984676663899876267899999998875068878
Q ss_pred CCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHHCC----CCC-------------CC-CCCEEEEEE-CCHHHHH
Q ss_conf 750257898878988627102-247899999999876417----978-------------99-897289995-8979999
Q gi|254780486|r 265 SPILAVVACEALKLIKRKPAL-HKSLLQLINITDKIANKK----IGF-------------SS-QSHIQSIVI-GDNKSCL 324 (381)
Q Consensus 265 ~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~~~~~~~----~g~-------------~~-~s~I~~v~~-gd~~~a~ 324 (381)
+|..+..++..|+.+.-+-++ .+...+++++++..-... .|+ .+ .+.++.+.+ ++.+.+.
T Consensus 273 sp~da~l~lRGL~TL~lRm~~~~~nA~~iA~~L~~hp~V~~V~yPgL~shp~~~la~~~~~g~~g~~~sf~l~~~~~~~~ 352 (424)
T PRK06084 273 SPFNAFLILQGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDHPEHALARRYLGGKPAAILSFGIKGGQAAGA 352 (424)
T ss_pred CCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEEECCCHHHHH
T ss_conf 82246898757771999999999989999999871998247988898888239999873589962489998459799999
Q ss_pred HHHHHHH--HCCEEE----EEECCCCCCC--------------CCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 9999999--779189----8622888888--------------87039996287899999999999999
Q gi|254780486|r 325 NIAKNLQ--KKGFDI----RAIRPPTVPI--------------NTARLRISITLNVDEPTIVKLFDILP 373 (381)
Q Consensus 325 ~~~~~L~--~~Gi~v----~~i~~PtVp~--------------~~~rlRi~v~a~~t~edi~~~~~~l~ 373 (381)
++.+.|. ..+.-. +-+.+|+... ....||+++...+.++-|+.+-.+|.
T Consensus 353 ~f~~~L~lf~~a~SlGg~eSLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSVGlEd~eDLi~DL~~AL~ 421 (424)
T PRK06084 353 RFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELERAGVSRDMVRLSIGIEHIDDIIADLAQALA 421 (424)
T ss_pred HHHHHCCCCCEEECCCCCCCCEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHH
T ss_conf 999848805150757877521235751541008999998659894969997622999999999999997
No 262
>PRK07049 methionine gamma-lyase; Validated
Probab=99.71 E-value=7.6e-15 Score=112.68 Aligned_cols=294 Identities=16% Similarity=0.143 Sum_probs=182.1
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHH--HHC--CCCCE-
Q ss_conf 7224436885899999999840128885167416602456556663168971004542026775266--640--87640-
Q gi|254780486|r 65 GGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGI--NSG--KAQAI- 139 (381)
Q Consensus 65 ~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~--~ls--~a~~~- 139 (381)
.=||. | ++....||++||++-|.++|++|+||..|-..++.+++++||.|++-...-.+.+.=+ .+. +...+
T Consensus 76 ~YsR~--~-NPT~~~lE~~iA~LEg~~~a~~~sSGmaAi~~~ll~ll~~Gd~iv~~~~~YggT~~l~~~~l~~~GI~~~~ 152 (427)
T PRK07049 76 VYSRF--N-HPNSEIVEDRLAVYEGAEAAALFSSGMSAIATTLLAFVRPGDVIVHSQPLYGGTETLLAKTFRNFGVGAVG 152 (427)
T ss_pred EECCC--C-CHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCCEEEE
T ss_conf 14289--8-87799999999998099848993469999999999851899999989998278999999999975988999
Q ss_pred EECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHC------CEEEEECCCCCCCCCCCCCCE
Q ss_conf 30568814789976431000247860797146215766134689999986313------608986131122234777640
Q gi|254780486|r 140 AIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDY------DGFIVVDEAHATGVCGPLGKG 213 (381)
Q Consensus 140 ~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y------~~~LivDEah~~Gv~G~~G~G 213 (381)
....+|.+++++.+.+... ..++.+|.+|+.-+-.-.++|+++|.++|++. +++++||-.-+..++
T Consensus 153 ~~d~~d~~~~~~~i~~~~~--~~~Tklv~~EspsNP~l~v~Di~~ia~ia~~~g~~~~~~i~~vvDNT~atP~~------ 224 (427)
T PRK07049 153 FADGVSEAAIEAAAEAAAA--KGRVSLIYIETPANPTNALVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVF------ 224 (427)
T ss_pred EECCCCHHHHHHHHHHHCC--CCCEEEEEEECCCCCCCCCCCHHHHHHHHHHHCHHCCCCCEEEEECCCCCCCC------
T ss_conf 7089999999999986214--78706999978999877265889999999984420147876999788623213------
Q ss_pred EEEEHHCCCCCCCCCCCCCCCCC----EEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHH
Q ss_conf 11000013465210013465653----0267524510010000121100001357750257898878988627102-247
Q gi|254780486|r 214 LTHIIEERNNVIVMHSCSKALGS----SGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKS 288 (381)
Q Consensus 214 ~~~~~~~~~~~iv~~TlsKa~g~----~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~ 288 (381)
+..+ ....+|++.|.+|-+++ .||.|++++++++.++.... .+...++|..+...+..|+.|.-+-++ .+.
T Consensus 225 -~~Pl-~~GaDivvhS~TKyl~GHsDvl~G~v~~~~~~~~~l~~~~~--~~G~~~sP~~a~L~lrGL~TL~lRm~r~~~n 300 (427)
T PRK07049 225 -QKPL-EHGADLSVYSLTKYVGGHSDLVAGAVLGRKALVRQVRALRG--AIGTQLDPHSCWMLGRSLETLVLRMERANRN 300 (427)
T ss_pred -CCCH-HHCCCEEEEECCCEECCCCCCCCCEEECCHHHHHHHHHHHH--HHCCCCCCHHHHHHHCCCCCHHHHHHHHHHH
T ss_conf -6815-42898899963614248877513516467999999999875--3147789067788863688699999999999
Q ss_pred HHHHHHHHHHHHH-CC---CCC---------------CCCCCEEEEEE-CCHHHHHHHHHHHH--HCCEEE----EEECC
Q ss_conf 8999999998764-17---978---------------99897289995-89799999999999--779189----86228
Q gi|254780486|r 289 LLQLINITDKIAN-KK---IGF---------------SSQSHIQSIVI-GDNKSCLNIAKNLQ--KKGFDI----RAIRP 342 (381)
Q Consensus 289 l~~~~~~~~~~~~-~~---~g~---------------~~~s~I~~v~~-gd~~~a~~~~~~L~--~~Gi~v----~~i~~ 342 (381)
..+.+++++..-. .. -|+ .+.+.++.+.+ ++...+.++.+.|. ..++-. +-+..
T Consensus 301 A~~vA~~L~~hp~V~~V~Ypgl~~~~~~~~~l~~~~~~G~Gg~~sf~l~g~~~~~~~f~~~l~lf~~a~SlGg~eSLi~h 380 (427)
T PRK07049 301 ARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVFKRQCTGAGSTFSFDIKGGQAAAFRFLNALQIFKLAVSLGGTESLASH 380 (427)
T ss_pred HHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHHCCCCEEEECCCCCCCEEEC
T ss_conf 99999999848983279778978887689999997278984389999728899999999828806364266876503137
Q ss_pred CCC------CC--------CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 888------88--------870399962878999999999999999988
Q gi|254780486|r 343 PTV------PI--------NTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 343 PtV------p~--------~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
|+. |. ....||+++... +++.+++-|++.++
T Consensus 381 Pa~~th~~~~~e~r~~~Gi~~~liRlSVGlE----d~eDLi~DL~qAL~ 425 (427)
T PRK07049 381 PASMTHSGVPADVRERIGVLESLIRLSIGIE----HPDDLIADLAQALD 425 (427)
T ss_pred CCCCCCCCCCHHHHHHCCCCCCEEEEEECCC----CHHHHHHHHHHHHH
T ss_conf 5311564699999996597929699992339----99999999999983
No 263
>PRK07582 cystathionine gamma-lyase; Validated
Probab=99.71 E-value=1.6e-15 Score=116.89 Aligned_cols=283 Identities=17% Similarity=0.182 Sum_probs=172.1
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHH-CCHH--HHHH-HHHCCCCCEEEC
Q ss_conf 24436885899999999840128885167416602456556663168971004542-0267--7526-664087640305
Q gi|254780486|r 67 SRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKL-VHAS--IREG-INSGKAQAIAIP 142 (381)
Q Consensus 67 sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~-~HaS--i~~g-~~ls~a~~~~f~ 142 (381)
+|. | ++....||++||++-|.++|++|+||..|-.+++.+++++||+|++-.. ...+ +... ..--+.++..+
T Consensus 48 sR~--g-NPT~~~lE~~la~LEg~~~a~~~sSGmaAi~~~l~~ll~~Gd~iv~~~~~Yggt~~l~~~~l~~~Gi~v~~~- 123 (370)
T PRK07582 48 GRS--S-NPTWRQLESALGELEGGAAALVFGSGMAAITAVLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREA- 123 (370)
T ss_pred ECC--C-CHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEEC-
T ss_conf 389--9-868999999999971997189864879999999999708999899778877799999998875068168953-
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCC
Q ss_conf 68814789976431000247860797146215766134689999986313608986131122234777640110000134
Q gi|254780486|r 143 HNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERN 222 (381)
Q Consensus 143 HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~ 222 (381)
|..++++... +.+.+|.+|+.-+=...+.||++|.++|+++|+.++||-.-+..++ +..+ ...
T Consensus 124 --~~~d~~~~~~-------~~tklv~~EspsNP~l~v~Di~~ia~~A~~~gi~~vVDNT~atP~~-------~~Pl-~~G 186 (370)
T PRK07582 124 --PTAGMAEAAA-------GAADLVLAETPSNPGLDVVDLARLARACHAAGALLVVDNTTATPLG-------QRPL-ELG 186 (370)
T ss_pred --CCHHHHHHHC-------CCCCEEEEECCCCCCCEEECCHHHHHHHHHCCCEEEEECCCCCHHH-------CCCH-HCC
T ss_conf --8551787722-------5773899977999886533538889999876996999889840642-------4800-218
Q ss_pred CCCCCCCCCCCCCC----EEEEEECC-CCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHH
Q ss_conf 65210013465653----02675245-10010000121100001357750257898878988627102-24789999999
Q gi|254780486|r 223 NVIVMHSCSKALGS----SGALVGSN-KIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINIT 296 (381)
Q Consensus 223 ~~iv~~TlsKa~g~----~GG~i~~~-~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~ 296 (381)
.+|++.|.+|-+++ .||+|+++ +++.+.++...+ .+...++|..+..++..++.+.-+-++ .+...++++++
T Consensus 187 ADivvhS~TKYl~Ghsd~lgG~v~~~~~~~~~~~~~~~~--~~G~~~sP~~a~lllrGl~TL~lRm~r~~~nA~~lA~~L 264 (370)
T PRK07582 187 ADLVVASDTKALSGHSDLLAGYVAGRDPELMAAVERWRL--LAGAIPGPFEAWLAHRSLATLGLRFERQCQNALAVAELL 264 (370)
T ss_pred CCEEEEEECEEECCCCCCCCEEEECCCHHHHHHHHHHHH--HCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 986988504352478874032872588889999999998--528878878899998610868899999987899999999
Q ss_pred HHHHH-CC---CCC-------------CCCCCEEEEEECCHHHHHHHHHHHH--HCCEEEEEECC----C-----CCCCC
Q ss_conf 98764-17---978-------------9989728999589799999999999--77918986228----8-----88888
Q gi|254780486|r 297 DKIAN-KK---IGF-------------SSQSHIQSIVIGDNKSCLNIAKNLQ--KKGFDIRAIRP----P-----TVPIN 348 (381)
Q Consensus 297 ~~~~~-~~---~g~-------------~~~s~I~~v~~gd~~~a~~~~~~L~--~~Gi~v~~i~~----P-----tVp~~ 348 (381)
+..-. .. .|+ ...+.++.+.+++...+.++.+.|. ..+.-...+.- + .+|
T Consensus 265 ~~hp~V~~V~yPgL~s~p~h~la~k~~~g~Gg~~sf~l~~~~~~~~f~~~l~l~~~a~SlGg~~s~~~~~~~~~~~i~-- 342 (370)
T PRK07582 265 REHPAVRGLRYPGLPEDPAHAVARAQMRRFGGLVSFELADAEAVEAFVDRSRLLVAATSFGGVHTSADRRARWGDAVP-- 342 (370)
T ss_pred HCCCCCCEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHHCCCCC--
T ss_conf 709996778898999981399999868998738999979999999999817947245363346678479988039979--
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 70399962878999999999999999
Q gi|254780486|r 349 TARLRISITLNVDEPTIVKLFDILPQ 374 (381)
Q Consensus 349 ~~rlRi~v~a~~t~edi~~~~~~l~~ 374 (381)
...||+++...+.++-|+.+-.+|++
T Consensus 343 ~~liRlSVGlEd~~DLi~Dl~qAL~~ 368 (370)
T PRK07582 343 PGFVRLSCGIEDTDDLVADVEQALDA 368 (370)
T ss_pred CCEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf 39299994009999999999999985
No 264
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=99.70 E-value=4.3e-15 Score=114.21 Aligned_cols=286 Identities=20% Similarity=0.218 Sum_probs=173.6
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHC-CHHHHH--HH-HHCCCCCEEECCCCHHHH
Q ss_conf 58999999998401288851674166024565566631689710045420-267752--66-640876403056881478
Q gi|254780486|r 74 YNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLV-HASIRE--GI-NSGKAQAIAIPHNNINSF 149 (381)
Q Consensus 74 ~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~-HaSi~~--g~-~ls~a~~~~f~HnD~~~L 149 (381)
++....||+++|++-|.++++.|+||..|-..++-++.++||+|+.-... ..+-+. .. +--+..+..| |..+.
T Consensus 62 nPT~~~lE~~~a~LEg~~~~~afsSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~---d~~~~ 138 (396)
T COG0626 62 NPTRDALEEALAELEGGEDAFAFSSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFV---DPGDD 138 (396)
T ss_pred CCCHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHCCEEEEEE---CCCCH
T ss_conf 963799999999860988379953739999999998357999898457764329999999998568599997---89975
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCC
Q ss_conf 99764310002478607971462157661346899999863136089861311222347776401100001346521001
Q gi|254780486|r 150 AENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHS 229 (381)
Q Consensus 150 e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~T 229 (381)
+...+...+ ++..+|.+|+.-+..-.+.|+++|.++++++|++++||..-+.+++ +..+ ....+|++.+
T Consensus 139 ~~~~~~~~~---~~tk~v~lEtPsNP~l~v~DI~~i~~~A~~~g~~vvVDNTfatP~~-------q~PL-~~GaDIVvhS 207 (396)
T COG0626 139 EALEAAIKE---PNTKLVFLETPSNPLLEVPDIPAIARLAKAYGALVVVDNTFATPVL-------QRPL-ELGADIVVHS 207 (396)
T ss_pred HHHHHHHCC---CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCC-------CCHH-HHCCCEEEEE
T ss_conf 889987446---6834999967999630555699999999864988999889662201-------6855-5099789985
Q ss_pred CCCCCCC----EEEEEECCC-CCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHH-HC
Q ss_conf 3465653----026752451-0010000121100001357750257898878988627102-247899999999876-41
Q gi|254780486|r 230 CSKALGS----SGALVGSNK-IIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINITDKIA-NK 302 (381)
Q Consensus 230 lsKa~g~----~GG~i~~~~-~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~~~~-~~ 302 (381)
..|-+++ .||.|++++ ++.+.+....+.. +.+.++|-.+...+..++.+.-+-++ .+...++++++...- -+
T Consensus 208 aTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~-~G~~l~p~dA~l~lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~ 286 (396)
T COG0626 208 ATKYLGGHSDVLGGVVLTPNEELYELLFFAQRAN-TGAVLSPFDAWLLLRGLRTLALRMERHNENALKIAEFLADHPKVK 286 (396)
T ss_pred CCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHH-CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_conf 4333367735041688448689999999998865-278788799999981715399999999998999999986299768
Q ss_pred CC---CC-------------CCCCCEEEEEECCHHHHHHHHHHHHHCCEEE------EEECCCCCC------C-------
Q ss_conf 79---78-------------9989728999589799999999999779189------862288888------8-------
Q gi|254780486|r 303 KI---GF-------------SSQSHIQSIVIGDNKSCLNIAKNLQKKGFDI------RAIRPPTVP------I------- 347 (381)
Q Consensus 303 ~~---g~-------------~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v------~~i~~PtVp------~------- 347 (381)
+. ++ .+-+.++++.+.+...+.++.+.|.--.+-+ +-+.+|++. .
T Consensus 287 ~V~yPgl~shp~he~~krq~~g~gg~~Sf~l~~~~~~~~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~G 366 (396)
T COG0626 287 KVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAKKFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAG 366 (396)
T ss_pred EEECCCCCCCCCHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHCC
T ss_conf 99899998897689999745798608999967858999999727823783268774400016655675548987898659
Q ss_pred -CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf -8703999628789999999999999999887
Q gi|254780486|r 348 -NTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 348 -~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
....||+++..... +.+++-|++.++.
T Consensus 367 i~~~LvRlSVGlEd~----eDLiaDl~~Al~~ 394 (396)
T COG0626 367 ITDGLVRLSVGLEDV----EDLIADLEQALAK 394 (396)
T ss_pred CCCCEEEEEECCCCH----HHHHHHHHHHHHH
T ss_conf 999828999567998----9999999999985
No 265
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=99.70 E-value=1.3e-14 Score=111.22 Aligned_cols=281 Identities=18% Similarity=0.158 Sum_probs=172.9
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHC-CHHHHHH-HHHCCCCCEEECCCCHHHHHH
Q ss_conf 58999999998401288851674166024565566631689710045420-2677526-664087640305688147899
Q gi|254780486|r 74 YNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLV-HASIREG-INSGKAQAIAIPHNNINSFAE 151 (381)
Q Consensus 74 ~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~-HaSi~~g-~~ls~a~~~~f~HnD~~~Le~ 151 (381)
++..+.||++||++-|.|.|++|+||..|-..++. +..++|.|++-... ..+...= -.+....+....-++.+.+++
T Consensus 53 nPT~~~le~~la~LE~~~~a~~~sSGmaAi~~~l~-~l~~Gd~vv~~~~~Yg~t~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (364)
T PRK07269 53 NPTRATLEETLAAIESADYALATSSGMSAIVLAFS-GFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYANTEEELIA 131 (364)
T ss_pred CHHHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHH-HHCCCCEEEECCCEECHHHHHHHHHHHCCEEEEEECCCHHHHHH
T ss_conf 86389999999998499744532768999999999-83689808970460737999999887438389996898599997
Q ss_pred HHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCC
Q ss_conf 76431000247860797146215766134689999986313608986131122234777640110000134652100134
Q gi|254780486|r 152 NINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCS 231 (381)
Q Consensus 152 ~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~Tls 231 (381)
.+ .++..+|.+|+.-+-.-.+.|+++|.++|+++|+.++||-.-+..++ +..+ ....+|++.+.+
T Consensus 132 ~i-------~~~Tklv~~EspsNP~l~v~Di~~i~~iA~~~g~~~vvDNT~atP~~-------~~Pl-~~GaDivihS~T 196 (364)
T PRK07269 132 AI-------EEDTDIVYIETPTNPLMVEFDIEKVAQLAHAKGAKVIVDNTFYSPIY-------QRPL-EDGADIVLHSAT 196 (364)
T ss_pred HC-------CCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCCC-------CCCC-CCCCCEEEEECC
T ss_conf 44-------87853999988999777624779999988756985999788643202-------6732-358618998355
Q ss_pred CCCCC----EEEEEE-CCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHH-HCCC
Q ss_conf 65653----026752-4510010000121100001357750257898878988627102-247899999999876-4179
Q gi|254780486|r 232 KALGS----SGALVG-SNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINITDKIA-NKKI 304 (381)
Q Consensus 232 Ka~g~----~GG~i~-~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~~~~-~~~~ 304 (381)
|-+++ .||.|+ .++++.+.++...+ .....++|..+..++..|+.+.-+-++ .+...+++++++..- -++.
T Consensus 197 KYl~GHsDvl~G~vv~~~~~~~~~l~~~~~--~~G~~~sP~~a~l~~RGL~TL~lR~~~~~~nA~~lA~~L~~hp~V~~V 274 (364)
T PRK07269 197 KYLSGHNDVLAGVVVTNDLELYDKLFYNLN--TTGAVLSPFDSYLLMRGLKTLSLRMERSTANAQEVVAFLKKSPAVKEV 274 (364)
T ss_pred CCCCCCCCCEEEEEECCCHHHHHHHHHHHH--HCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 001488874016894598899999999998--548878947778886377739999999999999999999759983499
Q ss_pred CCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEE------EEECCCCCC--------------CCCCEEEEECCCCCCHHH
Q ss_conf 789989728999589799999999999779189------862288888--------------887039996287899999
Q gi|254780486|r 305 GFSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDI------RAIRPPTVP--------------INTARLRISITLNVDEPT 364 (381)
Q Consensus 305 g~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v------~~i~~PtVp--------------~~~~rlRi~v~a~~t~ed 364 (381)
-+++.+.++.+.+.+...+.++.+.|.=-++-+ +-+.+|+.- .....+|+++.. |+
T Consensus 275 ~yPGlgg~~sf~l~~~~~~~~f~~~l~lf~~a~SlGg~eSLi~~p~~~~h~~~~~e~r~~~Gi~~~lvRlSvGl----Ed 350 (364)
T PRK07269 275 LYTGKGGMISFKVADETKIPHILNSLKVFTFAESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGI----ED 350 (364)
T ss_pred ECCCCCCEEEEEECCHHHHHHHHHHCCCCEEECCCCCCCCEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECC----CC
T ss_conf 77997726799968889999999848634353066775613478753456338999999659792959999331----99
Q ss_pred HHHHHHHHHHHH
Q ss_conf 999999999998
Q gi|254780486|r 365 IVKLFDILPQII 376 (381)
Q Consensus 365 i~~~~~~l~~v~ 376 (381)
++.+++-|++.+
T Consensus 351 ~~DLi~DL~qAL 362 (364)
T PRK07269 351 ARDLIADLRQAL 362 (364)
T ss_pred HHHHHHHHHHHH
T ss_conf 999999999985
No 266
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.69 E-value=5.8e-14 Score=107.17 Aligned_cols=293 Identities=17% Similarity=0.177 Sum_probs=167.0
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEEECCCCH-HHHHHHHHHCCCCCCCCHHHHCCHHHHHH-HHHCCCCCEEECC--C----
Q ss_conf 85899999999840128885167416602-45655666316897100454202677526-6640876403056--8----
Q gi|254780486|r 73 NYNQHLELEEEAADFFGFEKMLYFGSGYA-ANMAILSTLPQATDLIVYDKLVHASIREG-INSGKAQAIAIPH--N---- 144 (381)
Q Consensus 73 ~~~~~~~lE~~lA~~~g~e~al~~~sG~~-An~~~i~~l~~~~d~ii~D~~~HaSi~~g-~~ls~a~~~~f~H--n---- 144 (381)
+.-...+.|+..|+.||.+.+.++-.|+. +|..++.+++.|||.|++|++||-|+..| +-++||.-+...- |
T Consensus 172 h~G~~~eAq~~AA~~FGAD~TyFvvNGTS~~nk~v~~a~~~pGD~VLvdRN~HKSv~~GALIlsGA~PVYl~p~rN~~Gi 251 (720)
T PRK13578 172 HEGAAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHHGALIQAGATPVYLETARNPFGF 251 (720)
T ss_pred CCCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCCEEEEECCCCCCCCE
T ss_conf 78844799999999849982699957710889999997458999999656435777778898669767996664675651
Q ss_pred ---------CHHHHHHHHHHHHHC---C-CCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCC-
Q ss_conf ---------814789976431000---2-47860797146215766134689999986313608986131122234777-
Q gi|254780486|r 145 ---------NINSFAENINKWRKS---G-GKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPL- 210 (381)
Q Consensus 145 ---------D~~~Le~~l~~~~~~---~-~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~- 210 (381)
|.+.+++.+++.... . .+.+..|++-+-| ||.+.+++++.+...++.-.+++||||+ | +...
T Consensus 252 iggI~~~~f~~~~i~~~I~~~~~~~a~~~~p~~~aVit~~TY--dGi~yn~~~I~~~i~~~~~~ilfDEAw~-~-~~~F~ 327 (720)
T PRK13578 252 IGGIDAHCFDEEYLREQIREVAPERADEARPFRLAIIQLGTY--DGTIYNARQVVDKIGHLCDYILFDSAWV-G-YEQFI 327 (720)
T ss_pred ECCCCHHHCCHHHHHHHHHHHCHHHHCCCCCCEEEEEECCCC--CCEEECHHHHHHHHHHHCCEEEEECCHH-H-HHHCC
T ss_conf 167485752757789888743633312348861899946875--3542349999999864078389851102-1-44328
Q ss_pred --CCEE----EEEHHCCCCCCCCCCCCCCCCC--EEEEEECCCC-------CCCCCC-CCCCCEECCCCCCCCHHHHHHH
Q ss_conf --6401----1000013465210013465653--0267524510-------010000-1211000013577502578988
Q gi|254780486|r 211 --GKGL----THIIEERNNVIVMHSCSKALGS--SGALVGSNKI-------IYDYLI-NYAKPFIYTTSPSPILAVVACE 274 (381)
Q Consensus 211 --G~G~----~~~~~~~~~~iv~~TlsKa~g~--~GG~i~~~~~-------ii~~l~-~~~~~~ifst~l~P~~~aaa~a 274 (381)
-++. .+.-...+.++++.|--|-+++ ++.++--... .++.=| |.+-...-|||++.+..|..-.
T Consensus 328 P~~~d~~p~~l~~gaddp~i~vtQStHK~LaafSQaS~IHvkd~hI~g~~r~v~~~rfn~a~mmh~STSPsY~L~ASLDv 407 (720)
T PRK13578 328 PMMADCSPLLLELNENDPGIFVTQSVHKQQAGFSQTSQIHKKDNHIKGQARYCPHKRFNNAFMLHASTSPFYPLFAALDV 407 (720)
T ss_pred CCCCCCCCCCCCCCCCCCCEEEEEEHHHHHHHHCHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
T ss_conf 53112464333458777650466306555443222210122454346665667889999999877078808999998799
Q ss_pred HHHHHHHC--CCH-HHHHHHHHHHHHHHHHC----------C--------------------C---------CCCC----
Q ss_conf 78988627--102-24789999999987641----------7--------------------9---------7899----
Q gi|254780486|r 275 ALKLIKRK--PAL-HKSLLQLINITDKIANK----------K--------------------I---------GFSS---- 308 (381)
Q Consensus 275 al~~l~~~--~~~-~~~l~~~~~~~~~~~~~----------~--------------------~---------g~~~---- 308 (381)
+-++.+.+ ..+ .+.+..-++.++.+... . + ||..
T Consensus 408 ~A~m~~g~~G~~L~~e~i~~aie~Rk~il~~~~~~k~~~p~~v~g~~~~~~~~e~l~~d~~~w~~~Pg~~WHGf~g~~~~ 487 (720)
T PRK13578 408 NAKMHEGESGRRLWMDCVKLGIEARKLILARCKLIRPFIPPVVDGKPWQDYPTEQIASDLRFFSFEPGEKWHGFEGYAED 487 (720)
T ss_pred HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCCCCCCC
T ss_conf 99997312145899999999999999998654442255752126860354888886125010246887422465555766
Q ss_pred ---CCCEEE-EEEC----C-------HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf ---897289-9958----9-------799999999999779189862288888887039996287899999999999999
Q gi|254780486|r 309 ---QSHIQS-IVIG----D-------NKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILP 373 (381)
Q Consensus 309 ---~s~I~~-v~~g----d-------~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~ 373 (381)
..|+.- +.++ + .-.+..+.+.|.++||.+---. .. -|=+.+|...|++++++++++|.
T Consensus 488 ~~~lDP~Klti~tPGi~~~~g~~~~~GIpA~il~~yLre~gIvvEktd-----l~--~ILfL~T~G~t~~k~~~Lv~aL~ 560 (720)
T PRK13578 488 QYFVDPCKLLLTTPGIDAETGEYEDFGVPATILANYLRENGIVPEKCD-----LN--SILFLLTPAEDMAKLQQLVAMLA 560 (720)
T ss_pred CEECCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEECC-----CC--EEEEEECCCCCHHHHHHHHHHHH
T ss_conf 342267379985367455665421368758999999987690798547-----75--07999726788899999999999
Q ss_pred HHH
Q ss_conf 998
Q gi|254780486|r 374 QII 376 (381)
Q Consensus 374 ~v~ 376 (381)
+.-
T Consensus 561 ~fe 563 (720)
T PRK13578 561 RFE 563 (720)
T ss_pred HHH
T ss_conf 999
No 267
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein; InterPro: IPR010969 This entry describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulphurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N terminus. The function of members of this family are unknown..
Probab=99.69 E-value=1.9e-14 Score=110.24 Aligned_cols=310 Identities=20% Similarity=0.220 Sum_probs=188.3
Q ss_pred CHHHHHHHHHHHHHHCCC--CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCE---EEECCCCHH-HHHHHHHHCC--CCCC
Q ss_conf 889999999999863786--8872244368858999999998401288851---674166024-5655666316--8971
Q gi|254780486|r 45 STLLREKILSSLDSKIPI--GSGGSRLLCGNYNQHLELEEEAADFFGFEKM---LYFGSGYAA-NMAILSTLPQ--ATDL 116 (381)
Q Consensus 45 ~p~v~~a~~~a~~~~~g~--~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~a---l~~~sG~~A-n~~~i~~l~~--~~d~ 116 (381)
=++|.+++.+.+. .||- |-|+.|+..-.+..-.|.=++||+||+.++. .+.++-+.| |+++.-.+.+ ++|+
T Consensus 13 P~ev~~a~~~~~~-~~gg~~gRG~~~~~l~~~~~v~EtR~~lA~Lf~~~~~~~v~Ft~nAT~aLN~~L~Gl~lknr~g~h 91 (384)
T TIGR01977 13 PDEVYEAMADFLK-NYGGSPGRGRYRLALRASREVEETRELLAKLFNAPSKAHVVFTNNATTALNIALKGLILKNREGDH 91 (384)
T ss_pred HHHHHHHHHHHHH-HCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCCC
T ss_conf 3899999999987-348756888750345414228899999999848897462784060779999998433000559996
Q ss_pred CCHHHHCCHHHHHHHH-HC----CCCCEEECC-----CCHHHHHHHHHHHHHCCCCCCCEEEECCCCC-CCCCHHHHHHH
Q ss_conf 0045420267752666-40----876403056-----8814789976431000247860797146215-76613468999
Q gi|254780486|r 117 IVYDKLVHASIREGIN-SG----KAQAIAIPH-----NNINSFAENINKWRKSGGKGFPWIVVESIYS-MDGDKAPLDDL 185 (381)
Q Consensus 117 ii~D~~~HaSi~~g~~-ls----~a~~~~f~H-----nD~~~Le~~l~~~~~~~~~~~~~vv~egv~S-m~G~~apL~~i 185 (381)
|+.=..=|.|+..-+. +. +..+-..+- -|++++++.++.- + +.++|+- -=| ..|.+-|++||
T Consensus 92 Vi~t~mEHNsV~RPL~~L~~~~~g~~~~iv~~~~~G~~~~e~i~~~~~~~-----k-Tk~iv~~-HaSNV~G~ilpiEEI 164 (384)
T TIGR01977 92 VITTPMEHNSVLRPLEKLKEERIGVEITIVKCDNEGLISPERIKRAIKKN-----K-TKLIVVS-HASNVTGTILPIEEI 164 (384)
T ss_pred EEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCHHHHHHHCCCC-----C-CCEEEEE-CHHHHCCCCCCHHHH
T ss_conf 78647602366438999973599758998627888521679999853378-----8-3004322-003010311257899
Q ss_pred H-HHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCC-CC-CCCCCCCCCCC-CC--EEEEEECCCCC--CCCCCCCCCC
Q ss_conf 9-98631360898613112223477764011000013-46-52100134656-53--02675245100--1000012110
Q gi|254780486|r 186 V-KIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEER-NN-VIVMHSCSKAL-GS--SGALVGSNKII--YDYLINYAKP 257 (381)
Q Consensus 186 ~-~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~-~~-~iv~~TlsKa~-g~--~GG~i~~~~~i--i~~l~~~~~~ 257 (381)
. +||+++|...+||=||..|++- .++. .+ +++.=|=-|+| |- .|||+..++-- ..-|. .|++
T Consensus 165 gR~lA~e~g~~~~~DAaQtAGv~~---------Id~~~~~i~~lAF~GHKgLlGP~GtGGl~~~e~~~~~l~pl~-~GGT 234 (384)
T TIGR01977 165 GRELAKENGIFFILDAAQTAGVIP---------IDMEELAIDMLAFTGHKGLLGPQGTGGLIIKEGIKEILKPLK-SGGT 234 (384)
T ss_pred HHHHHHHCCCEEEEECCCCCCCCH---------HCCCHHHCCEEEECCCHHHHCCCCCEEEEEECCHHHHHHHHC-CCCC
T ss_conf 999998679739983200037541---------010322067676377522001136315788737056745320-6887
Q ss_pred -E-------------EC-CCCCCCCHHHHHHHHHHHHHHCC--CHHHHHHHHHHHHHHHHHCC-----CC---CCCCCCE
Q ss_conf -0-------------00-13577502578988789886271--02247899999999876417-----97---8998972
Q gi|254780486|r 258 -F-------------IY-TTSPSPILAVVACEALKLIKRKP--ALHKSLLQLINITDKIANKK-----IG---FSSQSHI 312 (381)
Q Consensus 258 -~-------------if-st~l~P~~~aaa~aal~~l~~~~--~~~~~l~~~~~~~~~~~~~~-----~g---~~~~s~I 312 (381)
+ -| ++.|+-+..++..++++.++... ..+++-..+.+.+.+..... +| .....++
T Consensus 235 Gs~S~~~~~P~~~PdrfE~GTLN~pGI~gL~agik~~~~~gi~~i~~kE~~l~~~l~~~L~~~~~V~iyG~~d~~~~~~v 314 (384)
T TIGR01977 235 GSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKELKLTEKLLNGLKEIKKVKIYGPKDPAKRVGV 314 (384)
T ss_pred CCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHCCCE
T ss_conf 54534445776043201144003799999988878875644778999999999999874016780676277034332675
Q ss_pred EEEEECCHHHHHHHHHHHHHCC-EEEEEEC--CC-------CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 8999589799999999999779-1898622--88-------88888703999628789999999999999999
Q gi|254780486|r 313 QSIVIGDNKSCLNIAKNLQKKG-FDIRAIR--PP-------TVPINTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 313 ~~v~~gd~~~a~~~~~~L~~~G-i~v~~i~--~P-------tVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
|++.+- .-....++..|-++. |.|+.-- -| |.|.|+ |||+++..+|+|||+++++++.++
T Consensus 315 vSf~~~-g~d~~~va~~L~~~~~I~~RtGlHCAPLAH~~~GT~~~Gt--~R~S~gyFnt~ee~~~l~~al~~i 384 (384)
T TIGR01977 315 VSFTVE-GIDSEEVADILDEKFDIAVRTGLHCAPLAHKTIGTFATGT--IRLSLGYFNTEEEIEKLVEALSEI 384 (384)
T ss_pred EEEEEC-CCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHCCCCCCE--EEEECCCCCCHHHHHHHHHHHHCC
T ss_conf 899834-8887789999986189189767666412303531167653--887278778889999999998509
No 268
>PRK06855 aminotransferase; Validated
Probab=99.68 E-value=6.8e-13 Score=100.53 Aligned_cols=214 Identities=15% Similarity=0.125 Sum_probs=120.3
Q ss_pred HHHHHHHHHHCCCEEEECCCCEEEECCCCC--CCCCCCCHHHHHHHHHHHHHHCCC-CCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 999999999759839992897689803446--566779889999999999863786-88722443688589999999984
Q gi|254780486|r 9 YEERLQKIKSKGRHRQLLRRQDIWDFTSHD--YLALSSSTLLREKILSSLDSKIPI-GSGGSRLLCGNYNQHLELEEEAA 85 (381)
Q Consensus 9 ~~~~l~~~~~~g~~~~~~~~~~~l~f~s~d--YLGl~~~p~v~~a~~~a~~~~~g~-~~~~sr~~~G~~~~~~~lE~~lA 85 (381)
+-++.++++++| +++++|+--+ ..++..-+.+++++.+++.+ -++ +.+.|. |..++.+++-+.+.
T Consensus 20 i~~~A~~l~~~G--------~~Ii~L~iGeP~~~df~tP~~i~ea~~~a~~~-~~~~~Yt~s~---G~~eLReaIA~~~~ 87 (433)
T PRK06855 20 IVNVAKKLEKLG--------IKINWENIGDPIAKGEKIPLWMKEIVSELVMD-DKSYGYCPTR---GVLETREFLAELTN 87 (433)
T ss_pred HHHHHHHHHHCC--------CCEEECCCCCCCCCCCCCCHHHHHHHHHHHHC-CCCCCCCCCC---CCHHHHHHHHHHHH
T ss_conf 999999999779--------97657469896989999888999999999858-9998869988---84999999999999
Q ss_pred HHCCCC---CEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHH-HHHCCCCCEEEC---CC----CHHHHHHHHH
Q ss_conf 012888---516741660245655666316897100454202677526-664087640305---68----8147899764
Q gi|254780486|r 86 DFFGFE---KMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREG-INSGKAQAIAIP---HN----NINSFAENIN 154 (381)
Q Consensus 86 ~~~g~e---~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g-~~ls~a~~~~f~---Hn----D~~~Le~~l~ 154 (381)
+..|.+ +=+++.+|....+..+.++..++|.|+.-.=.-.+-..+ +...++..+.++ .| |+++|++.++
T Consensus 88 ~~~g~~~~pd~I~vt~Ga~~ai~~~~~~l~pgdeVlip~P~Yp~Y~~~~~~~~g~~pv~~~l~~e~~f~~d~e~l~~~i~ 167 (433)
T PRK06855 88 KRGGAQITPDDILFFNGLGDAIAKIYGFLRREARVLGPSPAYSTHSSAEAAHAGCEPVTYRLDPEDNWYPDLDDLENKVK 167 (433)
T ss_pred HHCCCCCCHHHEEEECCHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHCCCEEEEEECCHHCCCCCCHHHHHHHHH
T ss_conf 87399998789889577699999999962899989962788735099999968986899955710187789999999986
Q ss_pred HHHHCCCCCCCEEEECCCCCCCCCHH---HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCC--CCCCCC
Q ss_conf 31000247860797146215766134---6899999863136089861311222347776401100001346--521001
Q gi|254780486|r 155 KWRKSGGKGFPWIVVESIYSMDGDKA---PLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNN--VIVMHS 229 (381)
Q Consensus 155 ~~~~~~~~~~~~vv~egv~Sm~G~~a---pL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~--~iv~~T 229 (381)
.. ++.+.+|+.-.=.. +|.+. .|++|+++|++||.+++.||++.--+|... -........++ .|.+.+
T Consensus 168 ~~----~~~kaiii~nP~NP-TG~v~s~e~l~~i~~~a~~~~i~visDEiY~~l~ydg~--~~~s~~~~~~~~~~i~~ns 240 (433)
T PRK06855 168 YN----PSIAGILLINPDNP-TGAVYPKEILREIVDIAREYDLFIIADEIYANIVYNGK--KTVPLSEVIGDVPGIALKG 240 (433)
T ss_pred CC----CCCEEEEEECCCCC-CCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEECCC--CCCCHHHHCCCCCEEEEEE
T ss_conf 69----97249998389999-88667999999999999975986986310112454898--7638899667577379820
Q ss_pred CCCCCCCEE---EEE
Q ss_conf 346565302---675
Q gi|254780486|r 230 CSKALGSSG---ALV 241 (381)
Q Consensus 230 lsKa~g~~G---G~i 241 (381)
|||+|+..| ||+
T Consensus 241 ~SK~~~mtGwRiG~~ 255 (433)
T PRK06855 241 ISKELPWPGSRCGWI 255 (433)
T ss_pred EHHCCCCCCCCEEEE
T ss_conf 010389763126788
No 269
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.68 E-value=1.7e-14 Score=110.43 Aligned_cols=343 Identities=16% Similarity=0.142 Sum_probs=190.2
Q ss_pred HHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC--CCCCCHHHHHHHHHHH
Q ss_conf 99999999997598399928976898034465667798899999999998637868872244--3688589999999984
Q gi|254780486|r 8 FYEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRL--LCGNYNQHLELEEEAA 85 (381)
Q Consensus 8 ~~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~--~~G~~~~~~~lE~~lA 85 (381)
.|..-+ +..+++.+---++|++-=.+ +..| +..+-+-+.+- +.-++.....+ +--....+.+.|+..|
T Consensus 11 ~f~~~l-~y~~~~~~sf~~PGHk~G~~-------f~ks-~f~~f~Gen~f-r~D~~~~~~~Ld~Ll~p~G~i~eAqe~aA 80 (557)
T COG1982 11 PFFKLL-KYVKEGNYSFHVPGHKGGAG-------FRKS-EFYDFFGENLF-RADVSEADGELDSLLDPEGPIKEAQELAA 80 (557)
T ss_pred HHHHHH-HHHHCCCCCEECCCCCCCCC-------CCHH-HHHHHHHHHHH-HCCCCCCCCCCCCCCCCCCCHHHHHHHHH
T ss_conf 168999-99717996312688778765-------4666-78887604454-21332265666554587753889999999
Q ss_pred HHCCCCCEEEECCCC-HHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEE-----------CCCCHHHHHHHH
Q ss_conf 012888516741660-24565566631689710045420267752666408764030-----------568814789976
Q gi|254780486|r 86 DFFGFEKMLYFGSGY-AANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAI-----------PHNNINSFAENI 153 (381)
Q Consensus 86 ~~~g~e~al~~~sG~-~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f-----------~HnD~~~Le~~l 153 (381)
+.+|.+++.+.-.|+ .+|..++.+++++||.|++|+++|-|+..|+-++++.-+.. ..-+.+.+++.+
T Consensus 81 ~~fgAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~glilaGa~Pvyl~p~~np~~gi~ggI~~~~~~~al 160 (557)
T COG1982 81 RVFGADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHGLILAGATPVYLEPSRNPLYGIIGGIPLETFKEAL 160 (557)
T ss_pred HHHCCCCEEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 98688862999778228999999860389998996587637888899874883278417778544653786989987999
Q ss_pred HHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCC
Q ss_conf 43100024786079714621576613468999998631360898613112223477764011000013465210013465
Q gi|254780486|r 154 NKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKA 233 (381)
Q Consensus 154 ~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa 233 (381)
.++.... +..|++-+-| ||...+++++++...++++++.+||+|+.- .+..+.. .+.....+.++++.|.-|.
T Consensus 161 ~~~~~~~---k~~vitnpTY--dGv~~n~~~i~~~~~~~~a~v~~deah~~~-~~~~~~l-~~~~~~~~~~~~tqS~HK~ 233 (557)
T COG1982 161 LAHPDAE---KLAVITNPTY--DGVCYNLRKIVELLHHYGAWVLYDEAHPAH-FDFSPML-PESALNGGADFVTQSTHKL 233 (557)
T ss_pred HHCHHHH---HEEEEECCCC--CEEEECHHHHHHHHHHCCCEEEHHHCCCCC-CCCCCCC-CCHHHHCCCEEEEEEHHHH
T ss_conf 8471304---0688964853--247605999999975318668886457743-3555557-4114545743898105442
Q ss_pred CCC--EEEEEECCC-CCCC--CCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHH---HHC
Q ss_conf 653--026752451-0010--000121100001357750257898878988627102---24789999999987---641
Q gi|254780486|r 234 LGS--SGALVGSNK-IIYD--YLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL---HKSLLQLINITDKI---ANK 302 (381)
Q Consensus 234 ~g~--~GG~i~~~~-~ii~--~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~---~~~l~~~~~~~~~~---~~~ 302 (381)
+|+ ++.++--.. .-++ .+. .+-...-|||++.+..|..-. -+.......+ ++.....+..+... ...
T Consensus 234 l~alSQaS~iHv~~~~~~~~~r~n-ea~~~h~STSPsY~l~ASlD~-Ar~~~~~~G~~l~~~~~~~~i~~r~~~~~~~~~ 311 (557)
T COG1982 234 LAALSQASMIHVKDGRAVNHERFN-EALMMHQSTSPSYPLMASLDV-ARMQEGNAGRELWQEVIDEAIDFRKALRRLINE 311 (557)
T ss_pred HHHHHHHHHHHHCCCCCCCHHHHH-HHHHHHCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 123436678750887657789999-999988067955899988999-998754334788888899999999999998876
Q ss_pred CCCCC----C------C--------------CCEEEEE-E-CCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEC
Q ss_conf 79789----9------8--------------9728999-5-897999999999997791898622888888870399962
Q gi|254780486|r 303 KIGFS----S------Q--------------SHIQSIV-I-GDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISI 356 (381)
Q Consensus 303 ~~g~~----~------~--------------s~I~~v~-~-gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v 356 (381)
.-+|. . . -|+.-.+ + ...-.+..+++.|.++|+...-- ....-.+=|++
T Consensus 312 ~~~~~~~~~~~~~~~~~whgf~~~~~~~~~lDP~Klti~tp~~Gipg~~v~~~L~e~gii~e~~-----~d~~~lll~~~ 386 (557)
T COG1982 312 IGFFPVLQPEKLDPPTGWHGFEDYADDQYFLDPTKLTITTPEFGIPGAIVAKYLREHGIIPEET-----GDYSNLLLFSP 386 (557)
T ss_pred CCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEEC-----CCCEEEEEEEE
T ss_conf 4886402665557753322212234454203660799965778973999999999758814531-----77324678632
Q ss_pred CCCCCHHHHHHHHHHHHH
Q ss_conf 878999999999999999
Q gi|254780486|r 357 TLNVDEPTIVKLFDILPQ 374 (381)
Q Consensus 357 ~a~~t~edi~~~~~~l~~ 374 (381)
....+..+++.+++.+..
T Consensus 387 ~~gk~~~lv~~L~~f~r~ 404 (557)
T COG1982 387 GIGKWQTLVDRLLEFKRR 404 (557)
T ss_pred CCCHHHHHHHHHHHHHHH
T ss_conf 410678999999999875
No 270
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.67 E-value=2e-13 Score=103.85 Aligned_cols=270 Identities=16% Similarity=0.186 Sum_probs=159.7
Q ss_pred CHHHHHHHHH----HHHHCCCC----CEEEECCCCHHHHHHHHHHC--------------CCCCCCCHHHHCCHHHHHHH
Q ss_conf 5899999999----84012888----51674166024565566631--------------68971004542026775266
Q gi|254780486|r 74 YNQHLELEEE----AADFFGFE----KMLYFGSGYAANMAILSTLP--------------QATDLIVYDKLVHASIREGI 131 (381)
Q Consensus 74 ~~~~~~lE~~----lA~~~g~e----~al~~~sG~~An~~~i~~l~--------------~~~d~ii~D~~~HaSi~~g~ 131 (381)
.+...++|++ +++++|.+ ...+.++|.+||+.++-+-- .+.-.|++-+..|.|+..++
T Consensus 33 sP~~t~lE~~vi~wl~~l~g~p~~~~~G~~tsGgs~anl~al~~AR~~~~~~~~~~~~~~~~~~~v~~s~~aH~Sv~KAa 112 (345)
T cd06450 33 SPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSVEKAA 112 (345)
T ss_pred CHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCHHHHHHH
T ss_conf 85899999999999999838997788769827568999999999999998888741677888769998897528999999
Q ss_pred HHCCCCCEEECCC-----CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCC
Q ss_conf 6408764030568-----81478997643100024786079714621576613468999998631360898613112223
Q gi|254780486|r 132 NSGKAQAIAIPHN-----NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGV 206 (381)
Q Consensus 132 ~ls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv 206 (381)
.+-+-+++..+-+ |+++|++.+++.+........+|.+=|-. ..|.+=||++|.+||++||.++.||-|+|-.+
T Consensus 113 ~ilg~~~~~vp~d~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT-~~GaiD~l~~i~~i~~~~~iwlHVDaA~GG~~ 191 (345)
T cd06450 113 AYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTT-DTGAIDPLEEIADLAEKYDLWLHVDAAYGGFL 191 (345)
T ss_pred HHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCC-CCCCCCCHHHHHHHHHHCCCCEEEECHHCCHH
T ss_conf 97489769975399980889999999999986699738999557876-76256789999999998499477510001201
Q ss_pred C-CCCCCEEEEEHHCCCCCCCCCCCCCCCCCE-E-EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-
Q ss_conf 4-777640110000134652100134656530-2-67524510010000121100001357750257898878988627-
Q gi|254780486|r 207 C-GPLGKGLTHIIEERNNVIVMHSCSKALGSS-G-ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK- 282 (381)
Q Consensus 207 ~-G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~-G-G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~- 282 (381)
+ -+.-+. ...++...+-++-.+.|-++.. + |+++-+ +.-.-.+++.+-.+
T Consensus 192 ~~~~~~~~--~~~gie~aDSit~d~HK~l~~p~~~~~~l~r------------------------alklw~~l~~~G~~g 245 (345)
T cd06450 192 LPFPEPRH--LDFGIERVDSISVDPHKYGLVPLGCSAVLVR------------------------ALKLWATLRRFGRDG 245 (345)
T ss_pred HCCCCCCH--HHCCCCCCCEEEECCHHCCCCCCCCEEEEHH------------------------HHHHHHHHHHHHHHH
T ss_conf 10622007--6579999888998812224878882688618------------------------889999999998999
Q ss_pred -CCHHHHHHHHHHHHHHHHHCCCCC----CCCCCEEEEEECCH----HHHHHHHHHHHHCC-EEEEEECCCCCCCCCCEE
Q ss_conf -102247899999999876417978----99897289995897----99999999999779-189862288888887039
Q gi|254780486|r 283 -PALHKSLLQLINITDKIANKKIGF----SSQSHIQSIVIGDN----KSCLNIAKNLQKKG-FDIRAIRPPTVPINTARL 352 (381)
Q Consensus 283 -~~~~~~l~~~~~~~~~~~~~~~g~----~~~s~I~~v~~gd~----~~a~~~~~~L~~~G-i~v~~i~~PtVp~~~~rl 352 (381)
.++.++..++.+++.+.....-++ +...+|+++...++ ....++.++|.+.| +++.+-. -.|...|
T Consensus 246 ~~~~i~~~~~~a~~l~~~l~~~~~~el~~~p~l~iV~Fr~~~~~~~d~~~~~l~~~l~~~g~~~vs~t~----~~g~~~l 321 (345)
T cd06450 246 YGEHIDRIVDLAKYLAELIRADPGFELLGEPNLSLVCFRLKPSVKLDELNYDLSDRLNERGGWHVPATT----LGGPNVL 321 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCEEEEEEEECCCHHCCHHHHHHHHHHHHCCCEEEEEEE----ECCEEEE
T ss_conf 999999999999999999962989899669965899999768201148999999999813999986159----9997899
Q ss_pred EEECCCCC-CHHHHHHHHHHHHH
Q ss_conf 99628789-99999999999999
Q gi|254780486|r 353 RISITLNV-DEPTIVKLFDILPQ 374 (381)
Q Consensus 353 Ri~v~a~~-t~edi~~~~~~l~~ 374 (381)
|+++...+ |++|||.+++.+++
T Consensus 322 R~~i~n~~tt~~di~~l~~~i~~ 344 (345)
T cd06450 322 RFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred EEEECCCCCCHHHHHHHHHHHHH
T ss_conf 99979999999999999999974
No 271
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.67 E-value=3e-14 Score=108.97 Aligned_cols=291 Identities=19% Similarity=0.175 Sum_probs=172.2
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCC-HHH--HHH-HHHCCCCCEE
Q ss_conf 722443688589999999984012888516741660245655666316897100454202-677--526-6640876403
Q gi|254780486|r 65 GGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVH-ASI--REG-INSGKAQAIA 140 (381)
Q Consensus 65 ~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~H-aSi--~~g-~~ls~a~~~~ 140 (381)
.=||. | ++....||++||++-|.++|+.|+||..|..+++.+++++||.|++-...- .+. ..- ..--+.++..
T Consensus 56 ~YsR~--g-NPT~~~lE~~la~LEgg~~a~~~sSGmaAi~~~l~~ll~~Gd~vv~~~~~Yggt~~~~~~~l~~~Gi~v~~ 132 (426)
T PRK05994 56 IYTRI--T-NPTTAVLEERVAALEGGTAALAVASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRW 132 (426)
T ss_pred EECCC--C-CHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHCCEEEEE
T ss_conf 11499--8-86699999999998599728994488999999999972789989984874268999999998608869999
Q ss_pred ECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHC
Q ss_conf 05688147899764310002478607971462157661346899999863136089861311222347776401100001
Q gi|254780486|r 141 IPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEE 220 (381)
Q Consensus 141 f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~ 220 (381)
+.-+|.+.+++.++ +++.+|.+|+.-+-.-.+.||++|.++|+++|+.++||-.-+..++ +..+ .
T Consensus 133 ~d~~d~~~~~~~i~-------~~T~lv~~EspsNP~l~v~Di~~ia~iA~~~g~~~vVDNT~atP~~-------~~Pl-~ 197 (426)
T PRK05994 133 ADADDPASFEAAIT-------PRTKAIFIESIANPGGTITDIEAIAEVAHRAGLPLIVDNTLASPYL-------IRPI-E 197 (426)
T ss_pred ECCCCHHHHHHHCC-------CCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCHHHH-------CCHH-H
T ss_conf 78998388997368-------8754999987899887234789999999971991786356520431-------5867-7
Q ss_pred CCCCCCCCCCCCCCCC----EEEEEECC--CCCCC-----CCC------------CCCCCE------------ECCCCCC
Q ss_conf 3465210013465653----02675245--10010-----000------------121100------------0013577
Q gi|254780486|r 221 RNNVIVMHSCSKALGS----SGALVGSN--KIIYD-----YLI------------NYAKPF------------IYTTSPS 265 (381)
Q Consensus 221 ~~~~iv~~TlsKa~g~----~GG~i~~~--~~ii~-----~l~------------~~~~~~------------ifst~l~ 265 (381)
...+|++.|.+|-+++ .||.|+.. .++.. .+. ...+.+ -+...++
T Consensus 198 ~GaDivvhS~TKyi~GHsDvlgG~vv~~g~~~w~~~~~~~~l~~~~~~~~g~~~~~~~~~~~~~~~~r~~~lr~lG~~ls 277 (426)
T PRK05994 198 HGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRPEYHGLVLHETFGNFAFAIAARVLGLRDLGPAIS 277 (426)
T ss_pred HCCCEEEEECCCCCCCCCCEEEEEEECCCCCCHHHCCCCHHHCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 48988999645103588763788885265200221244312236655645305987750578999999877541477568
Q ss_pred CCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHH-CC---CCCC--------------CCCCEEEEEEC-CHHHHHH
Q ss_conf 50257898878988627102-2478999999998764-17---9789--------------98972899958-9799999
Q gi|254780486|r 266 PILAVVACEALKLIKRKPAL-HKSLLQLINITDKIAN-KK---IGFS--------------SQSHIQSIVIG-DNKSCLN 325 (381)
Q Consensus 266 P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~~~~~-~~---~g~~--------------~~s~I~~v~~g-d~~~a~~ 325 (381)
|..+.-++..|+.+.-+-++ .+...+++++++..-. .. .|++ +.+.++.+.+. +...+.+
T Consensus 278 P~da~L~lRGL~TL~lRm~r~~~nA~~vA~~L~~hp~V~~V~yPgL~s~p~h~lak~~~~~g~G~~~Sf~l~g~~~~~~~ 357 (426)
T PRK05994 278 PFNAFLILTGIETLPLRMQRHSDNALAVAEWLSGHPKVSWVNYAGLPSDKYHALAQKYSPKGAGAVFTFGLKGGYEAGVK 357 (426)
T ss_pred CHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCHHHHHH
T ss_conf 16789997257838999999999999999999629997889898989980399999878899737999996697999999
Q ss_pred HHHHHH--HCCEEE----EEECCCCCC--------------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 999999--779189----862288888--------------8870399962878999999999999999988
Q gi|254780486|r 326 IAKNLQ--KKGFDI----RAIRPPTVP--------------INTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 326 ~~~~L~--~~Gi~v----~~i~~PtVp--------------~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
+.+.|. ..+.-. +-+.+|+.- .....||+++... +.+.+++-|++.++
T Consensus 358 f~~~l~lf~~a~SlGg~eSLi~~p~~~th~~~~~e~r~~~Gi~~~liRlSVGlE----d~eDLi~DL~qAL~ 425 (426)
T PRK05994 358 LVSSLKLFSHLANIGDTRSLVIHPASTTHRQLSDEQKVAAGAGPDVVRLSIGIE----DKDDIIADLEQALA 425 (426)
T ss_pred HHHHCCCCCCCCCCCCCCEEEECCCCCCCCCCCHHHHHHCCCCCCEEEEEECCC----CHHHHHHHHHHHHC
T ss_conf 998279150031667755045786423452189999996598969799984319----99999999999858
No 272
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.66 E-value=1.4e-13 Score=104.73 Aligned_cols=342 Identities=15% Similarity=0.091 Sum_probs=180.1
Q ss_pred HHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCC-CCCHHHHHHHHHHHHHC
Q ss_conf 99999999759839992897689803446566779889999999999863786887224436-88589999999984012
Q gi|254780486|r 10 EERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLC-GNYNQHLELEEEAADFF 88 (381)
Q Consensus 10 ~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~-G~~~~~~~lE~~lA~~~ 88 (381)
-++..+++.+|-.+.. ||.+---=.||..-.+|+..++..+- -.-|.|-|+.+. -...+.+.-..+=-.-.
T Consensus 135 ~~~a~~~e~~g~~i~k------lnignpa~fgf~~p~~~~~~~~~~~~--~~~gy~~s~g~~~ar~a~~~~~q~~~~~~~ 206 (518)
T PRK13355 135 ADEAMRMEANGTHILK------LNIGNPAPFGFRTPDEVVYDMAHQLP--DTEGYSPSKGLFSARKAIMQYAQLKNIPNV 206 (518)
T ss_pred HHHHHHHHHCCCEEEE------ECCCCCCCCCCCCCHHHHHHHHHHCC--CCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
T ss_conf 9999999974881676------34789886688894899999997372--345875455756899999999997699998
Q ss_pred CCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHH-HHHCCCCCEEECC-------CCHHHHHHHHHHHHHCC
Q ss_conf 888516741660245655666316897100454202677526-6640876403056-------88147899764310002
Q gi|254780486|r 89 GFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREG-INSGKAQAIAIPH-------NNINSFAENINKWRKSG 160 (381)
Q Consensus 89 g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g-~~ls~a~~~~f~H-------nD~~~Le~~l~~~~~~~ 160 (381)
..++..+-|.-..+-..++++|..+||.|++-.=.= -+|.+ +.|++++.+.|.- -|+++||+++.
T Consensus 207 ~~~di~~gnGvSE~i~~am~Alln~GDeVLiP~P~Y-Plyta~v~L~Gg~pV~y~~dEe~~w~PDiedLe~kIT------ 279 (518)
T PRK13355 207 DIDDIYTGNGVSELINLSMSALLDDGDEVLVPSPDY-PLWTACVNLAGGTAVHYRCDEESEWYPDIDDIRSKIT------ 279 (518)
T ss_pred CHHHEEECCCHHHHHHHHHHHHCCCCCEEEECCCCC-CCHHHHHHHCCCEEEEEEECCCCCCCCCHHHHHHHCC------
T ss_conf 740356547767999999998368999898259999-7789998860987889874522177889999985357------
Q ss_pred CCCCCEEEECCCCCCCCCH---HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCC--CCCCCCCCCCCC
Q ss_conf 4786079714621576613---46899999863136089861311222347776401100001346--521001346565
Q gi|254780486|r 161 GKGFPWIVVESIYSMDGDK---APLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNN--VIVMHSCSKALG 235 (381)
Q Consensus 161 ~~~~~~vv~egv~Sm~G~~---apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~--~iv~~TlsKa~g 235 (381)
++.+.+|+.-.=.. +|.+ ..|++|+++|++|+.+++-||++.--+|. |.-........++ +|.+.+|||+|+
T Consensus 280 ~kTKAIVInNPNNP-TGAVyS~E~LeeIaeiArehdLiIISDEIY~~LvYD--g~~h~Siasla~d~~~It~NG~SKsya 356 (518)
T PRK13355 280 SKTKAIVIINPNNP-TGALYPKEVLQQIVDIAREHQLIIFSDEIYDRLVMD--GLEHTSIASLAPDLFCVTFSGLSKSHM 356 (518)
T ss_pred CCCEEEEEECCCCC-CCCCCCHHHHHHHHHHHHHCCEEEEECCCHHHCCCC--CCCCCCHHHCCCCCEEEEECCCCCCEE
T ss_conf 15579999689898-887889999999999999859699962302210068--986304767088645999887766633
Q ss_pred CEE---EEEE--CCCCCCC-CC---CCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHHCC
Q ss_conf 302---6752--4510010-00---0121100001357750257898878988627102---247899999999876417
Q gi|254780486|r 236 SSG---ALVG--SNKIIYD-YL---INYAKPFIYTTSPSPILAVVACEALKLIKRKPAL---HKSLLQLINITDKIANKK 303 (381)
Q Consensus 236 ~~G---G~i~--~~~~ii~-~l---~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~---~~~l~~~~~~~~~~~~~~ 303 (381)
..| ||++ ++++++. ++ ...+...+ .+..|. ..++.+++.-.+...+. ..++.+..++.-+.....
T Consensus 357 MtGWRiGwmv~sG~~~~a~~~Ie~l~~Las~~l--csnvpa-Q~A~~aAL~g~qs~~d~~~~~~rl~erRdlv~e~Ln~I 433 (518)
T PRK13355 357 IAGFRAGWMMLSGNKRHAKDYIEGLNMLANMRM--CSNVPA-QSVVQTALGGHQSVKDYTVPGGRLYDQRELVYDMLNAI 433 (518)
T ss_pred CCEEEEEEEEECCCHHHHHHHHHHHHHHHHCCC--CCCHHH-HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 220113665424858999999999999860456--636899-99999986287648999999999999999999998359
Q ss_pred CCCCCCCCEEEEEE-C--CH-----HHHHHHHHHHH-HCCEEEEEE---CCCCCCCCCCEEEEECCCCCCHHHHHHHHHH
Q ss_conf 97899897289995-8--97-----99999999999-779189862---2888888870399962878999999999999
Q gi|254780486|r 304 IGFSSQSHIQSIVI-G--DN-----KSCLNIAKNLQ-KKGFDIRAI---RPPTVPINTARLRISITLNVDEPTIVKLFDI 371 (381)
Q Consensus 304 ~g~~~~s~I~~v~~-g--d~-----~~a~~~~~~L~-~~Gi~v~~i---~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~ 371 (381)
-|++...|--.+++ + |. ....+|+.+|+ +++|.+.|- ..+ +...+|++.- -+.|+++.+++.
T Consensus 434 pGvscvkP~GAFYlFPkID~~~~~i~dDeeFal~LL~Ee~VlVVPGsaFG~~----~pghfRIsya--ps~e~L~EA~~R 507 (518)
T PRK13355 434 PGISAVKPKAAFYIFPKIDVKIFNIHSDEQFALDLLHEKHILISHGGAFNWD----KPDHFRVVYL--PRLGMLEETMDE 507 (518)
T ss_pred CCCEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCC----CCCEEEEEEC--CCHHHHHHHHHH
T ss_conf 9976589981589955415344899899999999998589999587544899----9897999927--999999999999
Q ss_pred HHHHHHH
Q ss_conf 9999887
Q gi|254780486|r 372 LPQIISE 378 (381)
Q Consensus 372 l~~v~~E 378 (381)
|.+-++.
T Consensus 508 I~~FL~~ 514 (518)
T PRK13355 508 LDDFFSY 514 (518)
T ss_pred HHHHHHH
T ss_conf 9999998
No 273
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.66 E-value=1.9e-13 Score=103.94 Aligned_cols=312 Identities=20% Similarity=0.225 Sum_probs=189.5
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC--CEEEE-CCCCHHHHHHHHHHCCCCCCCCHH
Q ss_conf 988999999999986378688722443688589999999984012888--51674-166024565566631689710045
Q gi|254780486|r 44 SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE--KMLYF-GSGYAANMAILSTLPQATDLIVYD 120 (381)
Q Consensus 44 ~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e--~al~~-~sG~~An~~~i~~l~~~~d~ii~D 120 (381)
-+|+|.++..... ++ .-|.-+ ..++.++-+.|-.+++.+ ++++. +||+.+..+++..++.|+|.|+.=
T Consensus 16 v~~~V~~am~~~~-----~~-h~s~~F---~~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~ 86 (383)
T COG0075 16 VPPRVLLAMARPM-----VG-HRSPDF---VGIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVV 86 (383)
T ss_pred CCHHHHHHHCCCC-----CC-CCCHHH---HHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEEE
T ss_conf 8999999745777-----77-779889---99999999999999668887479976883799999998605899869998
Q ss_pred HHCCHH--HHHHHHHCCCCCEEEC-----CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 420267--7526664087640305-----688147899764310002478607971462157661346899999863136
Q gi|254780486|r 121 KLVHAS--IREGINSGKAQAIAIP-----HNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYD 193 (381)
Q Consensus 121 ~~~HaS--i~~g~~ls~a~~~~f~-----HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~ 193 (381)
..--.+ ..+=++..+++++.+. --|++++++.|++.... +.-.++=.|. -+|-.-||++|.+++++||
T Consensus 87 ~nG~FG~R~~~ia~~~g~~v~~~~~~wg~~v~p~~v~~~L~~~~~~--~~V~~vH~ET---STGvlnpl~~I~~~~k~~g 161 (383)
T COG0075 87 VNGKFGERFAEIAERYGAEVVVLEVEWGEAVDPEEVEEALDKDPDI--KAVAVVHNET---STGVLNPLKEIAKAAKEHG 161 (383)
T ss_pred ECCHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCC--CEEEEEECCC---CCCCCCCHHHHHHHHHHCC
T ss_conf 2780777999999982996699847888879999999998528995--0899981157---5201376999999999729
Q ss_pred EEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCC-EE-EEEECCCCCCCCCCCCCCC-EE-----------
Q ss_conf 0898613112223477764011000013465210013465653-02-6752451001000012110-00-----------
Q gi|254780486|r 194 GFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGS-SG-ALVGSNKIIYDYLINYAKP-FI----------- 259 (381)
Q Consensus 194 ~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~-~G-G~i~~~~~ii~~l~~~~~~-~i----------- 259 (381)
++++||-+-|+|- ..-..+.-..+++++.=-|++++ -| |+++.|+.-.+.+.....+ |.
T Consensus 162 ~l~iVDaVsS~Gg-------~~~~vd~wgiDv~itgSQK~l~~PPGla~v~~S~~a~~~~~~~~~~~~ylDL~~~~~~~~ 234 (383)
T COG0075 162 ALLIVDAVSSLGG-------EPLKVDEWGIDVAITGSQKALGAPPGLAFVAVSERALEAIEERKHPSFYLDLKKWLKYME 234 (383)
T ss_pred CEEEEEECCCCCC-------CCCCHHHCCCCEEEECCCHHCCCCCCCCEEEECHHHHHHHHCCCCCCEEECHHHHHHHHH
T ss_conf 8899982345788-------125444428458997672011589861436777999999855888760221999999885
Q ss_pred --CCC--CCCCCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCCCC------CCCCEE-EEEECCHHHHHHH
Q ss_conf --013--57750257898878988627--1022478999999998764179789------989728-9995897999999
Q gi|254780486|r 260 --YTT--SPSPILAVVACEALKLIKRK--PALHKSLLQLINITDKIANKKIGFS------SQSHIQ-SIVIGDNKSCLNI 326 (381)
Q Consensus 260 --fst--~l~P~~~aaa~aal~~l~~~--~~~~~~l~~~~~~~~~~~~~~~g~~------~~s~I~-~v~~gd~~~a~~~ 326 (381)
.++ .+|.....+..++|++++++ +.+.++-+.+.+.... +...+|+. ..+|.+ .+.+++.....++
T Consensus 235 ~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~~~a~r~-~~~alGl~~~~~~~~~s~tvta~~~P~g~~~~~~ 313 (383)
T COG0075 235 KKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRLAEALRA-GLEALGLELFADPERRSPTVTAIKVPEGVDDKKV 313 (383)
T ss_pred HCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCCCCCCCCCCEEEEECCCCCCCHHH
T ss_conf 368988898778999999999999986579999999999999999-9997698423686557885489978988772999
Q ss_pred HHHHHH-CCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 999997-791898622888888870399962878999999999999999988738
Q gi|254780486|r 327 AKNLQK-KGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 327 ~~~L~~-~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
...+++ .|+.+.+...|. ..-.+||-..-..+.+++..++.+|..++.+++
T Consensus 314 ~~~~~~~~g~~i~gg~~~l---~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g 365 (383)
T COG0075 314 RRALLKEYGVEIAGGQGPL---KGKIFRIGHMGNVRPEDVLAALAALEAALRELG 365 (383)
T ss_pred HHHHHHHCCEEECCCCCCC---CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 9999984799964565455---761899835756788999999999999999749
No 274
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.65 E-value=2.3e-13 Score=103.49 Aligned_cols=279 Identities=15% Similarity=0.159 Sum_probs=166.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCC-CCCC-CCCCHHHHHHHHHHHHHCCCC--CEEEECCCCHHHHHHHHHHC----CCCC
Q ss_conf 98899999999998637868872-2443-688589999999984012888--51674166024565566631----6897
Q gi|254780486|r 44 SSTLLREKILSSLDSKIPIGSGG-SRLL-CGNYNQHLELEEEAADFFGFE--KMLYFGSGYAANMAILSTLP----QATD 115 (381)
Q Consensus 44 ~~p~v~~a~~~a~~~~~g~~~~~-sr~~-~G~~~~~~~lE~~lA~~~g~e--~al~~~sG~~An~~~i~~l~----~~~d 115 (381)
-+|+|+++..+.....|+. +++ +.-. .-.....++.-+.+|+|+|.+ +.++.++++.+|-.++..+. ++++
T Consensus 10 ~~~~v~~~~~~~~~~~~~N-p~s~~h~~g~~a~~~le~aR~~ia~~lga~~~eiiFTsg~Tes~nl~i~g~~~~~~~~g~ 88 (354)
T TIGR03235 10 VDPEVAEVMLPFLLEEFGN-PGSRTHEHGHNAKKAVERARKQVAEALGAQTKEVIFTSGATESNNIAILGLARAHENKGK 88 (354)
T ss_pred CCHHHHHHHHHHHHHCCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHHHHHHCCCC
T ss_conf 9999999999999866879-730312899999999999999999980999677899688379999999999985026999
Q ss_pred CCCHHHHCCHHHHHHHHH---CCCCCEEECC-----CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHH
Q ss_conf 100454202677526664---0876403056-----88147899764310002478607971462157661346899999
Q gi|254780486|r 116 LIVYDKLVHASIREGINS---GKAQAIAIPH-----NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVK 187 (381)
Q Consensus 116 ~ii~D~~~HaSi~~g~~l---s~a~~~~f~H-----nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~ 187 (381)
.|+.-..-|.|+...++. .+..+...+- -|+++|++.++. .+.+|.+-.+-+..|.+-|+++|.+
T Consensus 89 ~ii~s~~EH~svl~~~~~l~~~G~~v~~~~vd~~G~id~~~l~~~l~~-------~t~lvsi~~~nnetG~i~pi~~i~~ 161 (354)
T TIGR03235 89 HIITTAIEHPAILEPARALERNGFTVTYLEVDESGRVSVEELADAIRD-------DTLLVSIMHVNNETGSLQPIREIAE 161 (354)
T ss_pred EEEECHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHCC-------CCEEEEEECCCCCCCCCCCHHHHHH
T ss_conf 999810030447999999996496899955578982877999987268-------9779999887566676388999988
Q ss_pred HHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE-EEEECCCCCCCC--CC--CCCCCEE---
Q ss_conf 863136089861311222347776401100001346521001346565302-675245100100--00--1211000---
Q gi|254780486|r 188 IANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG-ALVGSNKIIYDY--LI--NYAKPFI--- 259 (381)
Q Consensus 188 l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G-G~i~~~~~ii~~--l~--~~~~~~i--- 259 (381)
+|+++|+++++|-+|++|.+ .-.+...+.++++-+--|-+|-.| |++..++...+. +. .++.+.-
T Consensus 162 ~~~~~g~~~~vDa~Q~~g~~-------~id~~~~~~D~~s~S~HK~~GP~GiG~L~vr~~~~~~~~l~Pl~~GGgqe~g~ 234 (354)
T TIGR03235 162 LCEAREVFFHSDAAQVVGKI-------TVDLERDHIDLISLSGHKAYGPKGIGALYIRKRGKPKAPLAPIMFGGGQERGL 234 (354)
T ss_pred HHHCCCCEEEEECHHCCCCC-------CCCHHHHCCCEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCEECCCCCCCCC
T ss_conf 65225641562500115875-------55778849973763100034887149999804667666646403689886874
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHCC-CCC------CCC-CCEEEEEECCHHHHHHHHHHH
Q ss_conf 013577502578988789886271-02247899999999876417-978------998-972899958979999999999
Q gi|254780486|r 260 YTTSPSPILAVVACEALKLIKRKP-ALHKSLLQLINITDKIANKK-IGF------SSQ-SHIQSIVIGDNKSCLNIAKNL 330 (381)
Q Consensus 260 fst~l~P~~~aaa~aal~~l~~~~-~~~~~l~~~~~~~~~~~~~~-~g~------~~~-s~I~~v~~gd~~~a~~~~~~L 330 (381)
-++..+.+.+++..+++++...+. +..++++.+.+++.+..... .++ ... ..|+.+.+..- ....+...|
T Consensus 235 r~GT~nv~~i~g~~~A~~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~~v~i~g~~~~r~p~i~s~~~~gi-~~~~l~~~L 313 (354)
T TIGR03235 235 RPGTLPVPLIVGMGEAAEIARRNAQAWGVRLRAMCNLLRDALQTSLPGVKLNGDPAETLPNILSFSFEGV-NPEALIRNL 313 (354)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCEEEEEECCC-CHHHHHHHH
T ss_conf 6899659999999999999998289999999999999999997459965965882247588899997996-999999986
Q ss_pred HHCCEEEEE
Q ss_conf 977918986
Q gi|254780486|r 331 QKKGFDIRA 339 (381)
Q Consensus 331 ~~~Gi~v~~ 339 (381)
+.+|.|+.
T Consensus 314 -~~~iavst 321 (354)
T TIGR03235 314 -KADAAVST 321 (354)
T ss_pred -CCCCEEEH
T ss_conf -39989982
No 275
>KOG1405 consensus
Probab=99.64 E-value=1.5e-13 Score=104.59 Aligned_cols=339 Identities=18% Similarity=0.171 Sum_probs=205.1
Q ss_pred HHCCCEEEECCCCEEEECCCC---CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH---HHH--HC
Q ss_conf 975983999289768980344---6566779889999999999863786887224436885899999999---840--12
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSH---DYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEE---AAD--FF 88 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~---dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~---lA~--~~ 88 (381)
++-|+|.+.+||..+||.-|. ==||. +||++++++..--.-.- --.|---|+++.-+-.|.. +-. =.
T Consensus 64 kS~GNYlvDvDGN~lLDvYsQIsSvplGY-n~P~LvK~a~~p~~~~~----lvnRPALg~fP~kd~~~~l~~~ll~~APK 138 (484)
T KOG1405 64 KSIGNYLVDVDGNRLLDVYSQISSVPLGY-NNPALVKAAQQPQNATM----LVNRPALGNFPPKDFAEKLRQSLLSIAPK 138 (484)
T ss_pred HHCCCEEEECCCCEEEHHHHHHCCCCCCC-CCHHHHHHHCCHHHHHH----HHCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 42176689547876302465650156678-98899987348488888----70661015788066899999998764854
Q ss_pred CCCCEEEECCCCHHHHHHHHHHC------CCCCCCCHHHHCCHHHHHHH---------------------HHCCCC----
Q ss_conf 88851674166024565566631------68971004542026775266---------------------640876----
Q gi|254780486|r 89 GFEKMLYFGSGYAANMAILSTLP------QATDLIVYDKLVHASIREGI---------------------NSGKAQ---- 137 (381)
Q Consensus 89 g~e~al~~~sG~~An~~~i~~l~------~~~d~ii~D~~~HaSi~~g~---------------------~ls~a~---- 137 (381)
|.......-+|..||.-++.+.. .+++.=+..+.+-.||++-+ .+|..+
T Consensus 139 G~~~v~tm~cGs~aNEnA~K~afiwy~~k~rg~~~~s~~e~eScm~n~aPg~P~lsvlsF~gaFHGR~~g~lstT~SKpI 218 (484)
T KOG1405 139 GQKQVITMLCGSCANENAYKTAFIWYRAKERGQAGFSAEELESCMINQAPGAPDLSVLSFKGAFHGRTFGSLSTTHSKPI 218 (484)
T ss_pred HHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCC
T ss_conf 07778877505653388899999998751378899777888888705899998645554034104643013333457664
Q ss_pred ------CEEEC----------------CC---C---HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCH--HH--HHHH
Q ss_conf ------40305----------------68---8---1478997643100024786079714621576613--46--8999
Q gi|254780486|r 138 ------AIAIP----------------HN---N---INSFAENINKWRKSGGKGFPWIVVESIYSMDGDK--AP--LDDL 185 (381)
Q Consensus 138 ------~~~f~----------------Hn---D---~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~--ap--L~~i 185 (381)
-+.|+ || | +++.|+++.+++++.. .-.-|++|.|-|-.||- .| +..+
T Consensus 219 HKldiPaFdWPiA~fP~ykYPLdenv~~N~ked~~Cl~~Ve~li~~~~~k~~-pVaaiIvEPIQsEGGDnhaSp~Ff~kL 297 (484)
T KOG1405 219 HKLDIPAFDWPIAPFPRYKYPLDENVAENKKEDQGCLAEVEDLIVKYRKKKK-PVAAIIVEPIQSEGGDNHASPDFFRKL 297 (484)
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-CEEEEEEECHHCCCCCCCCCHHHHHHH
T ss_conf 0068888889778874345874565655122136679999999999760379-757998651102578866898999999
Q ss_pred HHHHHHCCEEEEECCCCCCCCCCCCCCE-EEEEHHCC-CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECCCC
Q ss_conf 9986313608986131122234777640-11000013-465210013465653026752451001000012110000135
Q gi|254780486|r 186 VKIANDYDGFIVVDEAHATGVCGPLGKG-LTHIIEER-NNVIVMHSCSKALGSSGALVGSNKIIYDYLINYAKPFIYTTS 263 (381)
Q Consensus 186 ~~l~~~y~~~LivDEah~~Gv~G~~G~G-~~~~~~~~-~~~iv~~TlsKa~g~~GG~i~~~~~ii~~l~~~~~~~ifst~ 263 (381)
++++++|++.++|||+| +| .|.||.- +-|+++.. |.+++ ||||-|-+ |||--... +|-+.+--+|.|=
T Consensus 298 rdi~~Kh~v~fivDEVQ-TG-gGaTGk~WaHehw~l~~PpD~v--TFSKK~q~-gGffh~~~-----frpn~pYrifNTW 367 (484)
T KOG1405 298 RDITKKHGVAFIVDEVQ-TG-GGATGKFWAHEHWNLDSPPDVV--TFSKKFQT-GGFFHDEE-----FRPNEPYRIFNTW 367 (484)
T ss_pred HHHHHHCCEEEEEEEEE-CC-CCCCCCEEEEHHCCCCCCCCCE--EHHHHHHC-CCCCCCCC-----CCCCCHHHHHHHH
T ss_conf 99998649589964000-07-8866754320203899995101--10255522-76424733-----4878447876543
Q ss_pred C-CCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH-HH---HHHCCCC----CCCCCCEEEEEECCHHHHHHHHHHHHHCC
Q ss_conf 7-75025789887898862710224789999999-98---7641797----89989728999589799999999999779
Q gi|254780486|r 264 P-SPILAVVACEALKLIKRKPALHKSLLQLINIT-DK---IANKKIG----FSSQSHIQSIVIGDNKSCLNIAKNLQKKG 334 (381)
Q Consensus 264 l-~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~-~~---~~~~~~g----~~~~s~I~~v~~gd~~~a~~~~~~L~~~G 334 (381)
+ -|.-+....+.++.+++++ +.+.......++ .+ +..+.-+ ..+..-.+.+-+.+...--.+...+.-.|
T Consensus 368 mGdP~k~lll~~vv~~I~~~~-Ll~n~~~vG~~l~~gL~~Lq~~~p~~~~~~RGrGTF~a~d~ps~~~Rdk~i~~~~~nG 446 (484)
T KOG1405 368 MGDPSKNLLLEEVVQEIKRED-LLNNVAHVGKALLKGLLELQAKYPGKINNLRGRGTFIAWDCPSGSIRDKLILIARLNG 446 (484)
T ss_pred CCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHCC
T ss_conf 078588899999999985888-9988999999999889999886842554245663279973898178899999998769
Q ss_pred EEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 189862288888887039996287899999999999999998873
Q gi|254780486|r 335 FDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 335 i~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
+.+..- |..-|||-++...++...+-+++.++++++++
T Consensus 447 v~~GGC-------g~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~l 484 (484)
T KOG1405 447 VNLGGC-------GDKSIRFRPSLVFRKHHADIFLDIFDKILAGL 484 (484)
T ss_pred CEECCC-------CCCEEEECCCEEEHHHHHHHHHHHHHHHHCCC
T ss_conf 421465-------42025403320114666889999999986049
No 276
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=99.62 E-value=1.5e-13 Score=104.65 Aligned_cols=294 Identities=16% Similarity=0.163 Sum_probs=168.3
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHH---HHH-HHHCCCCC
Q ss_conf 88722443688589999999984012888516741660245655666316897100454202677---526-66408764
Q gi|254780486|r 63 GSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASI---REG-INSGKAQA 138 (381)
Q Consensus 63 ~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi---~~g-~~ls~a~~ 138 (381)
|..=||. | ++....||++||++-|.++|++|+||..|-..++.+++++||.|++-...-... ... .+--+.++
T Consensus 52 g~~YsR~--g-NPT~~~lE~~la~LEgg~~a~~~sSGmaAi~~~ll~ll~~Gd~iv~~~~~YGgT~~l~~~~l~~~GI~v 128 (432)
T PRK06702 52 GYIYTRI--G-NPTLAAFEQKLAELEGGVGAVATASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDV 128 (432)
T ss_pred CCEECCC--C-CHHHHHHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHEECCCEEE
T ss_conf 9603189--9-867999999999983998289853289999999999628999899848871217999864020288799
Q ss_pred EEECCC-CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEE
Q ss_conf 030568-8147899764310002478607971462157661346899999863136089861311222347776401100
Q gi|254780486|r 139 IAIPHN-NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHI 217 (381)
Q Consensus 139 ~~f~Hn-D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~ 217 (381)
..|.-+ |.+.+++.+ .+++.+|.+|++-+-...+.|+++|+++|+++|+.++||-.-+..++ +..
T Consensus 129 ~~vd~~~~~~~~~~~~-------~~~Tkli~~EtpsNP~l~v~Di~~ia~iA~~~gi~~vVDNTfatP~~-------~rP 194 (432)
T PRK06702 129 TFFNPNLTADEIVALA-------NDKTKLVYAESLGNPAMNVLNFKEFSDAAKELEVPFIVDNTLATPYL-------CQA 194 (432)
T ss_pred EEECCCCCHHHHHHHC-------CCCCEEEEEEECCCCCCEEECHHHHHHHHHHCCCEEEEECCCCCCCC-------CCC
T ss_conf 9878999999999745-------78750899972799973202799999999766981896357643010-------462
Q ss_pred HHCCCCCCCCCCCCCCCCC----EEEEEECC--CCC--------CC---------CCCCCCC-CE----------ECCCC
Q ss_conf 0013465210013465653----02675245--100--------10---------0001211-00----------00135
Q gi|254780486|r 218 IEERNNVIVMHSCSKALGS----SGALVGSN--KII--------YD---------YLINYAK-PF----------IYTTS 263 (381)
Q Consensus 218 ~~~~~~~iv~~TlsKa~g~----~GG~i~~~--~~i--------i~---------~l~~~~~-~~----------ifst~ 263 (381)
+ ....+|++.|.+|-+++ .||.|+.. -++ .+ ++++++. .+ -+...
T Consensus 195 l-~~GaDiVvhS~TKyi~GHsD~lgG~vv~~g~~~w~~~~~p~l~~p~~~~~~~~~~~~~g~~~~~~~~r~~~~r~~G~~ 273 (432)
T PRK06702 195 F-EHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDPSYHGVSYVQNFGAAAYIVKARVQLLRDYGNC 273 (432)
T ss_pred H-HCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCHHCCCCHHHCCCCHHHCCHHHHHHCCHHHHHHHHHHHHHHHCCCC
T ss_conf 0-128989998534215688750335997157541101427876088355402078874137789999999998852666
Q ss_pred CCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHHHH-C---CCCCC--------------CCCCEEEEEE-CCHHHH
Q ss_conf 7750257898878988627102-2478999999998764-1---79789--------------9897289995-897999
Q gi|254780486|r 264 PSPILAVVACEALKLIKRKPAL-HKSLLQLINITDKIAN-K---KIGFS--------------SQSHIQSIVI-GDNKSC 323 (381)
Q Consensus 264 l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~~~~~-~---~~g~~--------------~~s~I~~v~~-gd~~~a 323 (381)
++|..+..++..|+.+.-+-++ .+...+.+++++.--. . ..|++ +.+.++.+.+ ++.+.+
T Consensus 274 lsP~~a~L~lrGL~TL~lRm~r~~~nA~~vA~~L~~hp~V~~V~yPgL~shp~~~la~k~~~~G~ggmlsf~l~g~~e~~ 353 (432)
T PRK06702 274 MSPFNAYISNIGLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLDSNENYSLAQKYLKKGASGVLTFGIKGGLEAA 353 (432)
T ss_pred CCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCHHHHHHHCCCCCEEEEEEEECCCHHHH
T ss_conf 78225689872789799999999999999999986299965797999988806889999727997069999945989999
Q ss_pred HHHHHHHH--HCCEEE----EEECCCCCCC--------------CCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 99999999--779189----8622888888--------------870399962878999999999999999
Q gi|254780486|r 324 LNIAKNLQ--KKGFDI----RAIRPPTVPI--------------NTARLRISITLNVDEPTIVKLFDILPQ 374 (381)
Q Consensus 324 ~~~~~~L~--~~Gi~v----~~i~~PtVp~--------------~~~rlRi~v~a~~t~edi~~~~~~l~~ 374 (381)
.++.+.|. ..+.-. +.+..|+... ....||+++...+.++-|+.+-.+|..
T Consensus 354 ~~f~~~l~l~~~a~slGg~~Sli~hPas~th~~~~~e~r~~~Gi~~~lvRlSVGlEd~eDLi~DL~qAL~~ 424 (432)
T PRK06702 354 KEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLIRLSVGIEDVSDIIADLEAALVG 424 (432)
T ss_pred HHHHHHCCCCEEEEECCCCCHHHCCCCCCCCCCCCHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 99998288173524668765200374514364389999986598939699975239999999999999998
No 277
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase; InterPro: IPR004631 4-aminobutyrate aminotransferase eukaryotic (2.6.1.19 from EC) is a class III pyridoxal-phosphate-dependent aminotransferase. The enzyme catalyses the conversion of 4-aminobutanoate and 2-oxoglutarate into succinate semialdehyde and L-glutamate. The degree of sequence difference between this set and known bacterial examples is greater than the distance between either set the most similar enzyme with distinct function, and so the prokaryotic and eukaryotic sets have been placed into separate families. This family describes known eukaryotic examples of the enzyme. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.; GO: 0003867 4-aminobutyrate transaminase activity, 0009448 gamma-aminobutyric acid metabolic process.
Probab=99.62 E-value=1.2e-13 Score=105.14 Aligned_cols=330 Identities=19% Similarity=0.226 Sum_probs=204.3
Q ss_pred HHCCCEEEECCCCEEEECCCCC---CCCCCCCHHHHHHHHHH-----HHHHCCCCCCCCCCCCCCCHHHHHHHHHHH---
Q ss_conf 9759839992897689803446---56677988999999999-----986378688722443688589999999984---
Q gi|254780486|r 17 KSKGRHRQLLRRQDIWDFTSHD---YLALSSSTLLREKILSS-----LDSKIPIGSGGSRLLCGNYNQHLELEEEAA--- 85 (381)
Q Consensus 17 ~~~g~~~~~~~~~~~l~f~s~d---YLGl~~~p~v~~a~~~a-----~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA--- 85 (381)
|+=|+|.+++||..+||+-|.= =+|. |||++.++++.- +..|=-+ |+++.- +|.+-+-
T Consensus 47 kS~GNYl~DvDGN~lLDlYsQIsSiPiGY-NnP~L~K~a~sPe~a~~LinRPAL---------Gnfp~~-~l~~~~~~g~ 115 (469)
T TIGR00699 47 KSVGNYLVDVDGNVLLDLYSQISSIPIGY-NNPALLKAAQSPEMATTLINRPAL---------GNFPSK-DLAKILKSGI 115 (469)
T ss_pred HCCCCEEEEECCCHHHHHHHHHHHCCCCC-CCHHHHHHHCCHHHHHHHHCCCCC---------CCCCHH-HHHHHHCCCC
T ss_conf 11576456314304788887775212246-687899865172457886447301---------467667-9999854881
Q ss_pred -HH--CCCCCEEEECCCCHHHHHHHHHHC------CCC--CCCCHHHHCCHHHHHHH---------------------HH
Q ss_conf -01--288851674166024565566631------689--71004542026775266---------------------64
Q gi|254780486|r 86 -DF--FGFEKMLYFGSGYAANMAILSTLP------QAT--DLIVYDKLVHASIREGI---------------------NS 133 (381)
Q Consensus 86 -~~--~g~e~al~~~sG~~An~~~i~~l~------~~~--d~ii~D~~~HaSi~~g~---------------------~l 133 (381)
++ .|......-.||-.||..++.+.. +|+ +-=++.+++-.||.+-+ -|
T Consensus 116 ~k~aPKg~~~v~~~~aG~dane~AfK~af~yYr~~~RGGp~~~Fs~eE~~s~m~N~~PG~P~~siLSF~~aFHGRlfGsL 195 (469)
T TIGR00699 116 LKVAPKGQDSVYRAMAGSDANELAFKAAFMYYRSKQRGGPERDFSEEENESCMVNQAPGSPDLSILSFKAAFHGRLFGSL 195 (469)
T ss_pred HHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHH
T ss_conf 23245210301144666426789999999999835898887531178877643168755850788852343103444420
Q ss_pred CCCC----------CEEECCCC----------------------HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCH--
Q ss_conf 0876----------40305688----------------------1478997643100024786079714621576613--
Q gi|254780486|r 134 GKAQ----------AIAIPHNN----------------------INSFAENINKWRKSGGKGFPWIVVESIYSMDGDK-- 179 (381)
Q Consensus 134 s~a~----------~~~f~HnD----------------------~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~-- 179 (381)
|..+ -+.++|-+ ++..|+++.+++.. .+.-.-||||.|-|=-||=
T Consensus 196 sTT~SKpiHKlD~PaF~WP~A~FP~LkYPLeE~~~~N~~Ee~rCL~~vE~L~~~~~~p-krtVaA~IvEPIQSEGGDNHA 274 (469)
T TIGR00699 196 STTRSKPIHKLDIPAFDWPQAPFPSLKYPLEEHVEENAKEEQRCLEEVEDLIKKWHKP-KRTVAAIIVEPIQSEGGDNHA 274 (469)
T ss_pred HHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC-CCEEEEEEECCCCCCCCCCCC
T ss_conf 0034776031786577746777876678702325754558889999999999731798-615888886243478885343
Q ss_pred H--HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCC-EEEEEHHCC-CCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCC
Q ss_conf 4--68999998631360898613112223477764-011000013-4652100134656530267524510010000121
Q gi|254780486|r 180 A--PLDDLVKIANDYDGFIVVDEAHATGVCGPLGK-GLTHIIEER-NNVIVMHSCSKALGSSGALVGSNKIIYDYLINYA 255 (381)
Q Consensus 180 a--pL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~-G~~~~~~~~-~~~iv~~TlsKa~g~~GG~i~~~~~ii~~l~~~~ 255 (381)
. -+.+|+++.+|||+..||||+| +| .|-||+ ++-|++++. |.|+| ||||=|= .|||=..+.+++= +
T Consensus 275 S~~Ff~KLr~i~~k~~v~FivDEVQ-TG-vGaTGklWAHe~W~L~~P~D~v--tFSKK~q-tAGyFFH~~~lrP---n-- 344 (469)
T TIGR00699 275 SPDFFRKLRDITKKHNVAFIVDEVQ-TG-VGATGKLWAHEHWNLDDPPDMV--TFSKKFQ-TAGYFFHDPALRP---N-- 344 (469)
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEEE-EC-CCCCCCCCCCCCCCCCCCCCCE--EECHHHH-CCCCCCCCCCCCC---C--
T ss_conf 3788899999998859568996455-08-7886331230027411138502--2045641-2764236735688---8--
Q ss_pred CCE-ECCCC-CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHH----HHHHHCCCC----C--CCCCCEEEEEECCHHHH
Q ss_conf 100-00135-775025789887898862710224789999999----987641797----8--99897289995897999
Q gi|254780486|r 256 KPF-IYTTS-PSPILAVVACEALKLIKRKPALHKSLLQLINIT----DKIANKKIG----F--SSQSHIQSIVIGDNKSC 323 (381)
Q Consensus 256 ~~~-ifst~-l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~----~~~~~~~~g----~--~~~s~I~~v~~gd~~~a 323 (381)
.|| .|-|= .-|.=+....+.++.|++.+ +.+.....-.++ ++|..+.-+ + .+..-.+..-+.++..=
T Consensus 345 ~pYr~FNTW~GdP~r~l~~~~i~~eI~~~~-L~~n~~~~Gd~Ly~GLe~L~~~YP~~~~nlRGKGrGTFiawD~p~~a~R 423 (469)
T TIGR00699 345 KPYRQFNTWMGDPSRALILREIIQEIKRKD-LLNNVAAVGDYLYTGLEDLQKKYPEKVQNLRGKGRGTFIAWDTPDEAKR 423 (469)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEECCCCCHHHH
T ss_conf 440003544577889999998887642257-7888998767889989999975013440344676421574049887888
Q ss_pred HHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 99999999779189862288888887039996287899999999999999998
Q gi|254780486|r 324 LNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 324 ~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
-++...++-.||.+..- |..=||+=++..-.+..-|-|++.|++++
T Consensus 424 d~l~~~~r~~Gvn~GGc-------G~~aiRLRP~LvF~~hHA~ilL~~~~~~~ 469 (469)
T TIGR00699 424 DKLLLKARLNGVNIGGC-------GVKAIRLRPMLVFQKHHADILLEAIEKII 469 (469)
T ss_pred HHHHHHHCCCCEEECCC-------CCCCEECCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 99999622382576265-------35424237530103556899999986309
No 278
>TIGR01326 OAH_OAS_sulfhy O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase; InterPro: IPR006235 This family of sequences is a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine sulfhydrylase (OAH, 2.5.1.49 from EC) and O-acetylserine sulfhydrylase (OAS, 2.5.1.47 from EC). An alternate name for OAH sulfhydrylase is homocysteine synthase.; GO: 0016765 transferase activity transferring alkyl or aryl (other than methyl) groups, 0006520 amino acid metabolic process.
Probab=99.62 E-value=1.5e-13 Score=104.56 Aligned_cols=296 Identities=19% Similarity=0.224 Sum_probs=182.7
Q ss_pred HHHHHHHCCCCCCC---CCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHH
Q ss_conf 99998637868872---244368858999999998401288851674166024565566631689710045420267752
Q gi|254780486|r 53 LSSLDSKIPIGSGG---SRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIRE 129 (381)
Q Consensus 53 ~~a~~~~~g~~~~~---sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~ 129 (381)
-.+. ++||+.-.| ||+++=| -.-||+|||.+=|==.||.++||..|...+|..|++-||.|++=. +|+=
T Consensus 36 eHaA-~LFgL~~~GnIYsRlmNPT---~dVlE~RiAALEGGvaal~~ASG~AA~~~Ailnla~AGDnIVsS~----~LYG 107 (434)
T TIGR01326 36 EHAA-ALFGLQEAGNIYSRLMNPT---TDVLEQRIAALEGGVAALAVASGQAAITYAILNLAQAGDNIVSSS----YLYG 107 (434)
T ss_pred HHHH-HHCCCCCCCCCCCCCCCCH---HHHHHHHHHHHCCCEEEHHHCHHHHHHHHHHHHHHHCCCCEEECC----CCCC
T ss_conf 9998-5306111587003588831---789988886421550002101157999999999972698269806----4442
Q ss_pred H--------HHHCCCCCEEECCCC-HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHC--CEEEEE
Q ss_conf 6--------664087640305688-14789976431000247860797146215766134689999986313--608986
Q gi|254780486|r 130 G--------INSGKAQAIAIPHNN-INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDY--DGFIVV 198 (381)
Q Consensus 130 g--------~~ls~a~~~~f~HnD-~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y--~~~Liv 198 (381)
| .+--|..++.+.++| ++.|++.+++- ++.|..|+|===..+++|.++|.++++++ ++-|||
T Consensus 108 GTynLF~~TlkrlGIevrFvd~dd~pe~~~k~id~n-------TKAvf~EtIgNP~~~v~Die~~a~~Ah~~PhgvPliV 180 (434)
T TIGR01326 108 GTYNLFKHTLKRLGIEVRFVDGDDDPEELEKAIDEN-------TKAVFAETIGNPALNVPDIEAVAEVAHAHPHGVPLIV 180 (434)
T ss_pred HHHHHHHHHHHHCCEEEEEECCCCCHHHHHHHCCCC-------CEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCEEEE
T ss_conf 257899995554481488727888878999760667-------5189840123877676785899999986789834887
Q ss_pred CCCCCCC-CCCCCCCEEEEEHHCCCCCCCCCCCCCCCCC----EEEEEECCCCCCCCCCCCCC---------CE---ECC
Q ss_conf 1311222-3477764011000013465210013465653----02675245100100001211---------00---001
Q gi|254780486|r 199 DEAHATG-VCGPLGKGLTHIIEERNNVIVMHSCSKALGS----SGALVGSNKIIYDYLINYAK---------PF---IYT 261 (381)
Q Consensus 199 DEah~~G-v~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~----~GG~i~~~~~ii~~l~~~~~---------~~---ifs 261 (381)
|-.-+++ . +|..+ .+.-+||+.|++|=+|+ .||.|.=+..+-||-.|.+| +| .|+
T Consensus 181 DNT~atpGY-------L~rPi-~hGADIVvhSaTK~iGGHG~aiGG~ivD~G~FndW~~~~gkFP~f~~PdpsYHGl~f~ 252 (434)
T TIGR01326 181 DNTFATPGY-------LCRPI-DHGADIVVHSATKYIGGHGTAIGGVIVDGGKFNDWANNPGKFPLFTTPDPSYHGLVFT 252 (434)
T ss_pred ECCCCCCCC-------CCCHH-HCCCCEEEEEECCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 478687641-------00645-6498679961001012631465047882675563014787477788888865871265
Q ss_pred C-----------------------------CCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHH-------------
Q ss_conf 3-----------------------------57750257898878988627102-2478999999998-------------
Q gi|254780486|r 262 T-----------------------------SPSPILAVVACEALKLIKRKPAL-HKSLLQLINITDK------------- 298 (381)
Q Consensus 262 t-----------------------------~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~~------------- 298 (381)
. +++|-.+-..+.-||.|.=+-++ -+...+.++++++
T Consensus 253 E~~g~~~~~G~~~~Afi~~~Rv~~LRD~Gaa~sPFnAFLllQGLETLsLR~ERH~~NA~kVA~fL~~Hp~V~wV~YPGL~ 332 (434)
T TIGR01326 253 ETFGEFEGLGLGNIAFIVKARVQLLRDLGAALSPFNAFLLLQGLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGLA 332 (434)
T ss_pred ECCCCCCCCCCCCHHEEEEEEEEECHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 31557577785000003444674221003340178999999866678767888889999999997278844513488878
Q ss_pred ------HHHCCCCCCC-CCCEEEEEECC-HHHHHHHHHHHH--HCCEEE----EEECCCCCCC--------------CCC
Q ss_conf ------7641797899-89728999589-799999999999--779189----8622888888--------------870
Q gi|254780486|r 299 ------IANKKIGFSS-QSHIQSIVIGD-NKSCLNIAKNLQ--KKGFDI----RAIRPPTVPI--------------NTA 350 (381)
Q Consensus 299 ------~~~~~~g~~~-~s~I~~v~~gd-~~~a~~~~~~L~--~~Gi~v----~~i~~PtVp~--------------~~~ 350 (381)
++.+.+ -.+ .+.|..+-+.+ .+...++.+.|+ .+=..| +.+.-|+.-. -.+
T Consensus 333 s~~~h~lAkkYl-~~G~~G~vLsFe~kGG~ea~~kfidalkL~s~lANvGDaksLvIHPAsTTH~QL~e~Eq~~AGVt~~ 411 (434)
T TIGR01326 333 SHPHHALAKKYL-PKGLFGAVLSFEIKGGREAGKKFIDALKLASHLANVGDAKSLVIHPASTTHQQLSEEEQLKAGVTPG 411 (434)
T ss_pred CCHHHHHHHHHH-CCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCCCHHHHHHCCCCCC
T ss_conf 875378899874-1794267874132182889999987767787765542011103347756666579799985389757
Q ss_pred EEEEECCCCCCHHHHHHHHHHH
Q ss_conf 3999628789999999999999
Q gi|254780486|r 351 RLRISITLNVDEPTIVKLFDIL 372 (381)
Q Consensus 351 rlRi~v~a~~t~edi~~~~~~l 372 (381)
.||++|.-.|-|+-|..|-.+|
T Consensus 412 ~iRlSvGIE~iDDIiaDL~qAl 433 (434)
T TIGR01326 412 LIRLSVGIENIDDIIADLEQAL 433 (434)
T ss_pred EEEEEEECCCHHHHHHHHHHHC
T ss_conf 0789872187678999999860
No 279
>KOG0257 consensus
Probab=99.62 E-value=2.9e-13 Score=102.86 Aligned_cols=313 Identities=16% Similarity=0.173 Sum_probs=171.9
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC-----CEEEECCCCHHHHHHHHHHCCCCCCCCHHH
Q ss_conf 999999999986378688722443688589999999984012888-----516741660245655666316897100454
Q gi|254780486|r 47 LLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE-----KMLYFGSGYAANMAILSTLPQATDLIVYDK 121 (381)
Q Consensus 47 ~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e-----~al~~~sG~~An~~~i~~l~~~~d~ii~D~ 121 (381)
-+.+++++++ + -+.-.-.+| -+|..++-..|-+.+++|+|.+ +.++...++.+-..++.+++++||.|++=+
T Consensus 48 fv~ea~~~~~-~-~~~~~qYt~-~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~ai~~~~~~l~~~GDeVii~e 124 (420)
T KOG0257 48 FVTEAAKNAA-K-EPSTNQYTR-GYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEAISSALLGLLNPGDEVIVFE 124 (420)
T ss_pred HHHHHHHHHH-C-CCHHCCCCC-CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCEEEEEC
T ss_conf 9999999874-2-530022346-679467899999998887355557866579953823789999998718998799935
Q ss_pred HCCHHHHHHHHHCCCCCEEEC-------------CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH---HHHH
Q ss_conf 202677526664087640305-------------688147899764310002478607971462157661346---8999
Q gi|254780486|r 122 LVHASIREGINSGKAQAIAIP-------------HNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP---LDDL 185 (381)
Q Consensus 122 ~~HaSi~~g~~ls~a~~~~f~-------------HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap---L~~i 185 (381)
=.-.|-+.-+++.|++.+... -+|.+.||.++..- .+ +|++.+=--=.|.+.+ |.+|
T Consensus 125 P~fd~Y~~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~k------Tk-~Ii~ntPhNPtGkvfsReeLe~i 197 (420)
T KOG0257 125 PFFDCYIPQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEK------TK-AIILNTPHNPTGKVFSREELERI 197 (420)
T ss_pred CCCHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHHHHHHCCCC------CC-EEEEECCCCCCCCCCCHHHHHHH
T ss_conf 751224567764488424405653446655766668969998643677------64-79994899986730579999999
Q ss_pred HHHHHHCCEEEEECCCCCCCCCCCC-CCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCCCCCCCCCCCCCEECC
Q ss_conf 9986313608986131122234777-6401100001346521001346565302---67524510010000121100001
Q gi|254780486|r 186 VKIANDYDGFIVVDEAHATGVCGPL-GKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKIIYDYLINYAKPFIYT 261 (381)
Q Consensus 186 ~~l~~~y~~~LivDEah~~Gv~G~~-G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~ii~~l~~~~~~~ifs 261 (381)
++||++||+++|.||++..-++-+. ---.+..-|..++.|-++||||+||.+| |++++++.++..++.-..-+.|+
T Consensus 198 a~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf~~TGWrlGW~igp~~L~~~~~~vh~~~~~~ 277 (420)
T KOG0257 198 AELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTFGVTGWRLGWAIGPKHLYSALFPVHQNFVFT 277 (420)
T ss_pred HHHHHHCCEEEEEHHHHHHHHHCCCCCEEEECCCCHHHEEEEECCCCCEEEEEEEEEEEEECHHHHHHHHHHHHHCCCCC
T ss_conf 99998789799982574788217876514622776224478851452100003456534645487646478786455202
Q ss_pred CCCCCCHHHHHHHHHHHHH--HCCC-------HHHHHHHHHHHHHHHHHCCCCCC----CCCCEEEEEE-----------
Q ss_conf 3577502578988789886--2710-------22478999999998764179789----9897289995-----------
Q gi|254780486|r 262 TSPSPILAVVACEALKLIK--RKPA-------LHKSLLQLINITDKIANKKIGFS----SQSHIQSIVI----------- 317 (381)
Q Consensus 262 t~l~P~~~aaa~aal~~l~--~~~~-------~~~~l~~~~~~~~~~~~~~~g~~----~~s~I~~v~~----------- 317 (381)
. .+|... |..+++..=. .+|+ +.+.++++...+.+ ....+|++ ..++..-+-+
T Consensus 278 ~-~Tp~q~-A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k-~L~~lg~~v~~p~gayyl~adfs~~~~~~~~~~ 354 (420)
T KOG0257 278 C-PTPIQE-ASAAAFALELACLQPGGSYFITELVKEYKEKRDILAK-ALEELGLKVTGPEGAYYLWADFSLAKSWPFFEE 354 (420)
T ss_pred C-CCHHHH-HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH-HHHHCCCCCCCCCCCEEEEEECCCCCCCCCCHH
T ss_conf 6-807789-9999874002016876206899879999999999999-998669852268984389995465345786222
Q ss_pred -CCHHHHHHHHHHHHHC-CEEEEEEC-C---CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf -8979999999999977-91898622-8---88888870399962878999999999999999
Q gi|254780486|r 318 -GDNKSCLNIAKNLQKK-GFDIRAIR-P---PTVPINTARLRISITLNVDEPTIVKLFDILPQ 374 (381)
Q Consensus 318 -gd~~~a~~~~~~L~~~-Gi~v~~i~-~---PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~ 374 (381)
++...-..++..|.++ |+.+.|.. | |-.......+|++... +++-++...+.|++
T Consensus 355 ~~~~~~d~~~~~wl~~~~Gv~~IP~saF~s~~~~~~~~~~~r~~~~k--~~~~L~~a~e~l~~ 415 (420)
T KOG0257 355 ILEKPDDFKFVRWLIKEGGVVVIPPSAFGSREHIKVAERLVRFCFCK--ADETLRKAIERLKK 415 (420)
T ss_pred HCCCCCCEEEEHHHHCCCCEEEECCHHCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHH
T ss_conf 22577733645213055867994721137835567887778888775--49999999998765
No 280
>PRK02769 histidine decarboxylase; Provisional
Probab=99.62 E-value=1.9e-12 Score=97.77 Aligned_cols=298 Identities=15% Similarity=0.124 Sum_probs=176.6
Q ss_pred HCCCCCCCCCCCCCCCHHH-HHHHHHH----HHHCCCC--C--EEEECCCCHHHHHHHHHHC--CCCCCCCHHHHCCHHH
Q ss_conf 3786887224436885899-9999998----4012888--5--1674166024565566631--6897100454202677
Q gi|254780486|r 59 KIPIGSGGSRLLCGNYNQH-LELEEEA----ADFFGFE--K--MLYFGSGYAANMAILSTLP--QATDLIVYDKLVHASI 127 (381)
Q Consensus 59 ~~g~~~~~sr~~~G~~~~~-~~lE~~l----A~~~g~e--~--al~~~sG~~An~~~i~~l~--~~~d~ii~D~~~HaSi 127 (381)
++.++..|-+...|+..++ .++|+++ |++++.+ + ..+.+.|+.+|+-++-+-- -|..+++.-+.+|-|+
T Consensus 44 ~~~~NN~Gdp~~~~~y~~~s~~~E~eVl~~~a~L~~~~~~~~wGyvTsGGTE~Nl~al~~ARe~~p~~vl~~Se~aHYSi 123 (380)
T PRK02769 44 SFSINNCGDPYSKSNYPLNSFDFERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSV 123 (380)
T ss_pred HCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHCCCCEEEECCCCHHHH
T ss_conf 26644578987558777430899999999999985899545877990655499999999999867996899667322779
Q ss_pred HHHHHHCCCCCEEECCC-----CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCE---EEEEC
Q ss_conf 52666408764030568-----81478997643100024786079714621576613468999998631360---89861
Q gi|254780486|r 128 REGINSGKAQAIAIPHN-----NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDG---FIVVD 199 (381)
Q Consensus 128 ~~g~~ls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~---~LivD 199 (381)
..++++-+-+....+-+ |+++|++.+++.+. +..+++++=|-. |.|.+=|+++|.++|++||. +|.||
T Consensus 124 ~Kaa~llgi~~~~V~~~~~G~md~~~L~~~i~~~~~---~P~iv~at~GTT-~~GaiD~i~~i~~i~~~~g~~~~wlHvD 199 (380)
T PRK02769 124 SKIARLLRIKSRVITSLPNGEIDYDDLISKIKENKN---QPPIIFANIGTT-MTGAIDNIKEIQEILKKIGIDDYYIHAD 199 (380)
T ss_pred HHHHHHCCCCCEEECCCCCCCCCHHHHHHHHHHCCC---CCEEEEEECCCC-CCCCCCCHHHHHHHHHHCCCCCEEEEEE
T ss_conf 999998399870736799994979999999996799---877999964798-8867189999999999829984279841
Q ss_pred CCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCC--EEEEEECCCCCCCCCCCCCCCEEC------CCCCCCCHHHH
Q ss_conf 3112223477764011000013465210013465653--026752451001000012110000------13577502578
Q gi|254780486|r 200 EAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGS--SGALVGSNKIIYDYLINYAKPFIY------TTSPSPILAVV 271 (381)
Q Consensus 200 Eah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~--~GG~i~~~~~ii~~l~~~~~~~if------st~l~P~~~aa 271 (381)
-|.| |.+-+.-+--..+-+..+.+-++-+.-|-+|+ ..|.++.++...+.+.. ..+|+- +++=|...+++
T Consensus 200 aA~g-G~~lpf~~~~~~~~~~~~~dSis~d~HK~~~~p~~~gv~l~r~~~~~~~~~-~~~Yi~s~d~TI~GSR~G~~~~~ 277 (380)
T PRK02769 200 AALS-GMILPFVNNPPPFSFADGIDSIAISGHKFIGSPMPCGIVLAKKKYVERISV-DVDYIGSRDQTISGSRNGHTALL 277 (380)
T ss_pred CCCC-CEEEECCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEHHHHHHCCC-CCCCCCCCCCCEECCCCCHHHHH
T ss_conf 2023-324332677545789888897998773457887755999987256541143-68703789822442576678999
Q ss_pred HHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCCC----CCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCC
Q ss_conf 98878988627--102247899999999876417978----998972899958979999999999977918986228888
Q gi|254780486|r 272 ACEALKLIKRK--PALHKSLLQLINITDKIANKKIGF----SSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTV 345 (381)
Q Consensus 272 a~aal~~l~~~--~~~~~~l~~~~~~~~~~~~~~~g~----~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtV 345 (381)
.-++++.+-.+ .+..++..++.++..+. .+..|+ +..+.++.+..+++ ... +++.+..-
T Consensus 278 ~W~~l~~lG~~Gy~~~v~~~~~~A~yl~~~-L~~~Gi~~~~~P~s~~Vvf~~p~e--------~i~-~kw~Ls~~----- 342 (380)
T PRK02769 278 LWAAIRSLGSKGLRQRVQHCLDMAQYAVDR-LQANGIPAWRNPNSITVVFPCPSE--------RIW-KKWHLATS----- 342 (380)
T ss_pred HHHHHHHHCHHHHHHHHHHHHHHHHHHHHH-HHHCCCCEEECCCCEEEEECCCCH--------HHH-HCEEEECC-----
T ss_conf 999999878988999999999999999999-987298747078853799628998--------885-07467215-----
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 88870399962878999999999999999988738
Q gi|254780486|r 346 PINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 346 p~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
....|+++...+|+|.||.+++-|.+.++..|
T Consensus 343 ---~~~~HiVvMPhVt~e~iD~fl~DL~~~~~~~~ 374 (380)
T PRK02769 343 ---GNQAHIITMPHHNKQQIDSLIDELIFDLKNPN 374 (380)
T ss_pred ---CCEEEEEECCCCCHHHHHHHHHHHHHHHCCCC
T ss_conf ---98269998999999999999999999855986
No 281
>PRK08637 hypothetical protein; Provisional
Probab=99.59 E-value=1.1e-12 Score=99.19 Aligned_cols=300 Identities=14% Similarity=0.165 Sum_probs=159.1
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCC
Q ss_conf 46566779889999999999863786887224436885899999999840128885167416602456556663168971
Q gi|254780486|r 37 HDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDL 116 (381)
Q Consensus 37 ~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ 116 (381)
..|+....-|+.++++.+-+- +-++ . . ..+ ....++..+.|..|---++..+..++|.
T Consensus 38 ~~Y~Pi~G~p~~~~~~~~~~~---~~~~---~-------~---~~~------~~~~~v~T~Ggt~al~~~~~~~~~~gd~ 95 (386)
T PRK08637 38 FPYAPPQGIEELRDLWQQKML---RDNP---S-------L---SGK------NMSLPIVTNALTHGLSLVADLFVNQGDT 95 (386)
T ss_pred CCCCCCCCCHHHHHHHHHHHH---CCCC---H-------H---HHC------CEEEEEECCCHHHHHHHHHHHHHCCCCE
T ss_conf 586897672999999999983---6792---1-------1---112------6466687574689999999998479998
Q ss_pred CCH-HH--HCCHHHHHHHHH-CCCCCEEECC------CCHHHHHHHHHHHHHCCCCCCCEEEEC-CCCCCCCC---HHHH
Q ss_conf 004-54--202677526664-0876403056------881478997643100024786079714-62157661---3468
Q gi|254780486|r 117 IVY-DK--LVHASIREGINS-GKAQAIAIPH------NNINSFAENINKWRKSGGKGFPWIVVE-SIYSMDGD---KAPL 182 (381)
Q Consensus 117 ii~-D~--~~HaSi~~g~~l-s~a~~~~f~H------nD~~~Le~~l~~~~~~~~~~~~~vv~e-gv~Sm~G~---~apL 182 (381)
|++ |- -+|..+. .. .+.++..|+- -|++.+++.|+... ++.+++++.- .-.. +|. ...+
T Consensus 96 Vlip~P~W~ny~~i~---~~~~G~~v~~y~~~~~~~~~~~~~~~~~l~~~~---~~~~vvll~n~phNP-TG~~~t~ee~ 168 (386)
T PRK08637 96 VLLPDHNWGNYKLVF---NTRNGANLQTYPIFDKDGHFTTDALVEALQAAY---NKDKVILILNFPNNP-TGYTPTHKEV 168 (386)
T ss_pred EEEECCCCHHHHHHH---HHHCCCCEEEEEEECCCCCCCHHHHHHHHHHCC---CCCCEEEEECCCCCC-CCCCCCHHHH
T ss_conf 999179854179999---983798416774264678978199999998457---788389998789998-8868999999
Q ss_pred HHHHHHHHHC-----CEEEEECCCCCCCCCCCCC-CE--EEEEHHCCCCC--CCCCCCCCCCCCEE---EEE---ECCCC
Q ss_conf 9999986313-----6089861311222347776-40--11000013465--21001346565302---675---24510
Q gi|254780486|r 183 DDLVKIANDY-----DGFIVVDEAHATGVCGPLG-KG--LTHIIEERNNV--IVMHSCSKALGSSG---ALV---GSNKI 246 (381)
Q Consensus 183 ~~i~~l~~~y-----~~~LivDEah~~Gv~G~~G-~G--~~~~~~~~~~~--iv~~TlsKa~g~~G---G~i---~~~~~ 246 (381)
++|.++++++ +.++++|||+. |+....+ .. .....+..+++ ++.-+|||.|+..| ||+ ..+++
T Consensus 169 ~~i~~~~~~~~~~g~~i~~i~D~aY~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~~myG~RvG~l~~~~~~~~ 247 (386)
T PRK08637 169 TTIVEAIKALADKGTKVIAVVDDAYY-GLFYEDVYKESLFTALANLHSNILAVKLDGATKEFFAWGFRVGFITFGTSDQT 247 (386)
T ss_pred HHHHHHHHHHHHCCCCEEEEEEHHHH-HHHCCCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCEEEEEEECCCHH
T ss_conf 99999999877338888999960145-66308843224999862157764899961310125570023157886059899
Q ss_pred CCCCCCCC----CCCEECCCCCCCCHHHHHHHHHHHHHHCCC----HHH---HHHHHHHHHHHHHHCC---CC---CCCC
Q ss_conf 01000012----110000135775025789887898862710----224---7899999999876417---97---8998
Q gi|254780486|r 247 IYDYLINY----AKPFIYTTSPSPILAVVACEALKLIKRKPA----LHK---SLLQLINITDKIANKK---IG---FSSQ 309 (381)
Q Consensus 247 ii~~l~~~----~~~~ifst~l~P~~~aaa~aal~~l~~~~~----~~~---~l~~~~~~~~~~~~~~---~g---~~~~ 309 (381)
.++.+... .|+ .+| .||... ...+.+++++.+. +++ .+++....+.+..... .+ ++.+
T Consensus 248 ~~~~~~~~~~~~~r~-~~S--npp~~g--q~~~~~~L~~~~~~~~e~~e~~~~m~~R~~~~~~~l~~~~~~~~~~~~p~~ 322 (386)
T PRK08637 248 TKEVLEAKVKGLIRS-NIS--SGPHPS--QSAVLHVLKNPDQFDKEIEQKIQILKERYEVTKEVVYDDQYDDHWQAYPFN 322 (386)
T ss_pred HHHHHHHHHHHHHHC-CCC--CCCHHH--HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 999999999999860-448--856899--999999975908899999999999999999999997420435686324567
Q ss_pred CCEEEEEEC-CHHHHHHHHHHHHH-CCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 972899958-97999999999997-791898622888888870399962878999999999999999988738
Q gi|254780486|r 310 SHIQSIVIG-DNKSCLNIAKNLQK-KGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 310 s~I~~v~~g-d~~~a~~~~~~L~~-~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
+.. +..++ ....+.++..+|++ .+|++. |.|...+||++. ..++++|++++++|+++++++.
T Consensus 323 ~G~-F~~i~~~~~~~e~l~~~Lle~~~V~~v-------~~g~~~iRIs~a-als~~nI~~~~~~I~~al~~Lk 386 (386)
T PRK08637 323 SGY-FMCLKLKDVDAEELRVHLLEKYGIGVI-------ALNETDLRIAFS-CVEEEDIPHVFDSIAKAIDDLR 386 (386)
T ss_pred CEE-EEEECCCCCCHHHHHHHHHHCCCEEEE-------ECCCCCEEEEEE-ECCHHHHHHHHHHHHHHHHHCC
T ss_conf 615-886479989999999999863958999-------559997799998-5889999999999999998539
No 282
>PRK06434 cystathionine gamma-lyase; Validated
Probab=99.59 E-value=2.2e-13 Score=103.54 Aligned_cols=287 Identities=18% Similarity=0.218 Sum_probs=172.4
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCC-HH--HHHH-HHHCCCCCE
Q ss_conf 8722443688589999999984012888516741660245655666316897100454202-67--7526-664087640
Q gi|254780486|r 64 SGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVH-AS--IREG-INSGKAQAI 139 (381)
Q Consensus 64 ~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~H-aS--i~~g-~~ls~a~~~ 139 (381)
..=+|. .++....||++||++-|.+.|++|+||..|-.+++.+++++||+|++-...- .+ +.+. ..--+.++.
T Consensus 56 y~YsR~---gnPT~~~lE~~la~LEg~~~a~~~sSGmaAi~~~ll~ll~~Gdhiv~~~~~Yg~T~~l~~~~l~~~Gi~v~ 132 (384)
T PRK06434 56 YIYTRW---GNPTVQAFEEKYAVLENAEHALSFSSGMGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVD 132 (384)
T ss_pred CEECCC---CCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCEEE
T ss_conf 225389---88669999999999849980999768999999999996189998998079827779999988875697279
Q ss_pred EECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHH
Q ss_conf 30568814789976431000247860797146215766134689999986313608986131122234777640110000
Q gi|254780486|r 140 AIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIE 219 (381)
Q Consensus 140 ~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~ 219 (381)
.+ |.++++.. + .. .+++.+|.+|+.-+-.-.++|++++.++|++++ ++||-.-+..++ +..+
T Consensus 133 ~v---d~~~~~~~-~-~~---~~~tklv~~Esp~NP~l~v~Di~aia~~A~~~~--vvVDNTfatP~~-------~~Pl- 194 (384)
T PRK06434 133 YI---DTDRLNSL-D-FD---PSNYDLIYAESITNPTLKVPDIKNVSSFCHEND--VIVDATFASPYN-------QNPL- 194 (384)
T ss_pred EE---CCCCHHHH-H-HC---CCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCC--EEEECCCCCCCC-------CCCC-
T ss_conf 95---78657889-6-07---468649999889998763156799997641598--477547652013-------7831-
Q ss_pred CCCCCCCCCCCCCCCCC----EEEEEE-CCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHH
Q ss_conf 13465210013465653----026752-4510010000121100001357750257898878988627102-24789999
Q gi|254780486|r 220 ERNNVIVMHSCSKALGS----SGALVG-SNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLI 293 (381)
Q Consensus 220 ~~~~~iv~~TlsKa~g~----~GG~i~-~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~ 293 (381)
....+|++.|.+|-+++ .||.++ .++++.+.++...+ .+...++|..|..++..|+.+.-+-++ .+...+.+
T Consensus 195 ~~GaDivihS~TKYi~GHsDvl~G~v~~~~~~~~~~l~~~~~--~~G~~~sP~~a~L~lrGL~TL~lRm~r~~~nA~~vA 272 (384)
T PRK06434 195 DLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRK--TLGSNPDPIQAYLALRGLKTLGLRMEKHNKNGMELA 272 (384)
T ss_pred CCCCCEEEEECCCCCCCCCCCCCCEEECCCHHHHHHHHHHHH--CCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
T ss_conf 038987997035200688886686450588999999999986--148989868899998267639999999999999999
Q ss_pred HHHHHHHH-CCC----------CCCCCCCEEEEEECCHHHHHHHHHHHHH--CCEEE----EEECCCCCC----------
Q ss_conf 99998764-179----------7899897289995897999999999997--79189----862288888----------
Q gi|254780486|r 294 NITDKIAN-KKI----------GFSSQSHIQSIVIGDNKSCLNIAKNLQK--KGFDI----RAIRPPTVP---------- 346 (381)
Q Consensus 294 ~~~~~~~~-~~~----------g~~~~s~I~~v~~gd~~~a~~~~~~L~~--~Gi~v----~~i~~PtVp---------- 346 (381)
++++.--. ... -+.+.+.++.+.+.....+.++.+.|.= .++-. +-+..|+.-
T Consensus 273 ~~L~~hp~V~~V~yPgle~ak~~~~g~gg~~sf~l~~~~~a~~f~~~l~l~~~a~SlGg~eSLi~~Pa~~th~~~~~e~r 352 (384)
T PRK06434 273 RFLRDSKKISNVYYPDTEIGKKVLRGFGGMLSFELRSMEDVHKFIRNLEIPMVAASLGGVESLITLPVETSHSSLSPEER 352 (384)
T ss_pred HHHHHCCCCCEECCCCHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHCCCCEEECCCCCCCCEEECCCCCCCCCCCHHHH
T ss_conf 99980999337748528999998378985589996889999999984896866036676660212762235521899999
Q ss_pred ----CCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf ----8870399962878999999999999999988
Q gi|254780486|r 347 ----INTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 347 ----~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
.....||+++.. ||++.+++-|++.++
T Consensus 353 ~~~Gi~~~liRlSVGl----Ed~~DLi~Dl~qAL~ 383 (384)
T PRK06434 353 ERLGISDNLVRFSIGI----EDIDDLIKDIENALS 383 (384)
T ss_pred HHCCCCCCEEEEEECC----CCHHHHHHHHHHHHC
T ss_conf 9659792969999231----999999999999867
No 283
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.58 E-value=1.7e-12 Score=98.05 Aligned_cols=325 Identities=18% Similarity=0.230 Sum_probs=189.4
Q ss_pred HHHHHHHHHHHHHHCCCEEEECCCC-EEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 5789999999999759839992897-689803446566779889999999999863786887224436885899999999
Q gi|254780486|r 5 QMSFYEERLQKIKSKGRHRQLLRRQ-DIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEE 83 (381)
Q Consensus 5 ~~~~~~~~l~~~~~~g~~~~~~~~~-~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~ 83 (381)
++.-.++.++.++.. +-..|+ .+.|| -||+.-+.+.++-.+-++. | + |+.+++ +++-+.
T Consensus 3 e~~r~~~a~~ii~~~----i~~~gr~~lyDl-----tGLsggf~i~~~~~~LleT-Y-v---Gpaif~------ek~~~~ 62 (346)
T TIGR03576 3 EVKRREKALEIIREK----ISRGGRDSLYDL-----TGLAGGFKIDEEDLELLET-Y-V---GPAIFE------EKVQEL 62 (346)
T ss_pred HHHHHHHHHHHHHHH----HHHCCCCCCCCC-----CCCCCCCCCCHHHHHHHHH-H-H---CCHHHH------HHHHHH
T ss_conf 788889999999999----851486642103-----4456784437868889997-5-0---508769------999999
Q ss_pred HHHHCCC--CCEEEECCCCHHHHHHHHHHCCCCCCCC---HHHHCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHH
Q ss_conf 8401288--8516741660245655666316897100---4542026775266640876403056881478997643100
Q gi|254780486|r 84 AADFFGF--EKMLYFGSGYAANMAILSTLPQATDLIV---YDKLVHASIREGINSGKAQAIAIPHNNINSFAENINKWRK 158 (381)
Q Consensus 84 lA~~~g~--e~al~~~sG~~An~~~i~~l~~~~d~ii---~D~~~HaSi~~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~ 158 (381)
=-+++|- |.++.||-...|-.++|.+|..++..|+ -+.-+|.|+..+|++.+++.+-. +.+++ +....
T Consensus 63 g~~HlgG~~e~~v~~NRTSsailAtIlaL~~~~~~Vvh~vPe~paHPSI~rsc~lagaey~E~-----d~~~e-l~~~d- 135 (346)
T TIGR03576 63 GREHLGGPEEKILVFNRTSSAILATILALEPPGRKVVHYLPEKPAHPSIPRSCKLAGAEYFES-----DELSE-LKKID- 135 (346)
T ss_pred HHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCEECCCCEEEC-----CCHHH-HCCCC-
T ss_conf 998739983257774562699999999835788705897878789997302005148714750-----66776-27678-
Q ss_pred CCCCCCCEEEECCCCCCCCCHHH---HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHH---CCCCCCCCCCCCC
Q ss_conf 02478607971462157661346---89999986313608986131122234777640110000---1346521001346
Q gi|254780486|r 159 SGGKGFPWIVVESIYSMDGDKAP---LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIE---ERNNVIVMHSCSK 232 (381)
Q Consensus 159 ~~~~~~~~vv~egv~Sm~G~~ap---L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~---~~~~~iv~~TlsK 232 (381)
...+|++-|.- ||..+.+ ++++.+.|+..|+..+||||-| .+=| ..+-.. ....++++.++.|
T Consensus 136 ----~~slvviTgst-md~~vi~~d~~k~vI~~Ak~~~a~V~vDDAsG-----ARvR-~L~gq~~al~lGADLvVTS~DK 204 (346)
T TIGR03576 136 ----GTSLVVITGST-MDLKVVSEEDLKRVIKQAKSKEAIVLVDDASG-----ARVR-RLYGQPPALDLGADLVVTSTDK 204 (346)
T ss_pred ----CCCEEEEECCC-CCCEECCHHHHHHHHHHHHHCCCEEEEECCCC-----CCHH-HHCCCCCCCCCCCCEEEEEHHH
T ss_conf ----87189993787-77300457889999999874698499854888-----7516-6519998655564268840021
Q ss_pred CC-CCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
Q ss_conf 56-53026752451001000012110000135775025789887898862710224789999999987641797899897
Q gi|254780486|r 233 AL-GSSGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIANKKIGFSSQSH 311 (381)
Q Consensus 233 a~-g~~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~s~ 311 (381)
.+ |-.||+++|++++++.++..+.- |.--.+|+..+|...+|+-.. ++..+...+..+.+......++.+. .+|
T Consensus 205 lM~GPR~GlLaG~~eLV~ki~~~~~~--~GlEaq~Pi~aAmv~aLe~f~--~~~l~~a~~r~~~~~l~~~~~l~~e-~Tp 279 (346)
T TIGR03576 205 LMDGPRGGLLAGRKELVDKIKSVGEQ--FGLEAQAPLLAAVVRALEEFE--LSRIRDAFKRKEEVYLRLFDKLNVE-RTP 279 (346)
T ss_pred CCCCCCCCEECCCHHHHHHHHHHHHH--CCCCCCCCHHHHHHHHHHCCC--HHHHHHHHHHHHHHHHHHHHCCCCC-CCC
T ss_conf 26677541122888999999999875--277778415999999997079--9999999999999887653035743-278
Q ss_pred EEEEEEC-CHHHHHHHHHHHH-HCCEEEE-EECCCCCCCCCCEEEEECCCCCC-HHHHHHHHHHHHHH
Q ss_conf 2899958-9799999999999-7791898-62288888887039996287899-99999999999999
Q gi|254780486|r 312 IQSIVIG-DNKSCLNIAKNLQ-KKGFDIR-AIRPPTVPINTARLRISITLNVD-EPTIVKLFDILPQI 375 (381)
Q Consensus 312 I~~v~~g-d~~~a~~~~~~L~-~~Gi~v~-~i~~PtVp~~~~rlRi~v~a~~t-~edi~~~~~~l~~v 375 (381)
--+|+-+ ..++..++.-.|+ +.||... ++.+|-. +--|||-+++.-. +=..+.+++++...
T Consensus 280 tGf~ik~~~~e~~~~~~~~LL~~ygIiTIta~Gmpga---sktlR~d~~skDAeri~~~~~v~av~~s 344 (346)
T TIGR03576 280 TGFVIKGVEEEKLIEIGLDLLRNYGIITITAVGMPGA---SKTLRFDLAAKDAERIGDDYLVEAVKDS 344 (346)
T ss_pred CEEEEECCCHHHHHHHHHHHHHHCCEEEEECCCCCCC---CCEEEEEEECCCHHHHCHHHHHHHHHHH
T ss_conf 5379856568888999999999769489834778887---6326876202516551579999999854
No 284
>KOG1549 consensus
Probab=99.57 E-value=1.7e-12 Score=98.10 Aligned_cols=321 Identities=16% Similarity=0.150 Sum_probs=187.2
Q ss_pred CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC-CCCCCCHHHHHHHHHHHHHCCCC--CEEEECCCCHHHHH
Q ss_conf 7689803446566779889999999999863786887224-43688589999999984012888--51674166024565
Q gi|254780486|r 29 QDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSR-LLCGNYNQHLELEEEAADFFGFE--KMLYFGSGYAANMA 105 (381)
Q Consensus 29 ~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr-~~~G~~~~~~~lE~~lA~~~g~e--~al~~~sG~~An~~ 105 (381)
.-++|.+++-- -+|.|.++..+-.. +..+..-|| ......+..++.-+.+|++.|.+ +-.+++.++.+|-.
T Consensus 44 ~vyld~~at~p----~~~~Vldam~~~~~--~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nl 117 (428)
T KOG1549 44 PVYLDNQATGP----MDPRVLDAMLPYLL--EYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNL 117 (428)
T ss_pred CEEEECCCCCC----CCHHHHHHHHHHHH--HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHH
T ss_conf 07970676789----99899999999999--8525998554202335899999999999848997737994796078889
Q ss_pred HHHHHCC-CCC----CCCHHHHCCHHHHHHHHHCC---CCC--EEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
Q ss_conf 5666316-897----10045420267752666408---764--0305688147899764310002478607971462157
Q gi|254780486|r 106 ILSTLPQ-ATD----LIVYDKLVHASIREGINSGK---AQA--IAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSM 175 (381)
Q Consensus 106 ~i~~l~~-~~d----~ii~D~~~HaSi~~g~~ls~---a~~--~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm 175 (381)
++..... .++ +|+.=...|.|+.++++... ..+ .++.-.+..++++...-. ...+.+|.++.|-||
T Consensus 118 vl~~v~~~~~~~~~k~iitl~~eH~~v~~s~~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i----~~~T~lv~I~~Vnn~ 193 (428)
T KOG1549 118 VLKGVARFFGDKTKKHIITLQTEHPCVLDSCRALQEEGLEVTYLPVEDSGLVDISKLREAI----RSKTRLVSIMHVNNE 193 (428)
T ss_pred HHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCEEEEEECCCCCCCCCHHHHHHHC----CCCCEEEEEEECCCC
T ss_conf 9987220245666636999504576004899999866827999156865521189999753----877439999700367
Q ss_pred CCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHC--CCCCCCCCCCCCCCCCEE-EEEECCCCCCCCCC
Q ss_conf 661346899999863136089861311222347776401100001--346521001346565302-67524510010000
Q gi|254780486|r 176 DGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEE--RNNVIVMHSCSKALGSSG-ALVGSNKIIYDYLI 252 (381)
Q Consensus 176 ~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~--~~~~iv~~TlsKa~g~~G-G~i~~~~~ii~~l~ 252 (381)
.|..-|++||..+|+++|+.+++|-||++|-. ..++ -..++++.+.-|-||.-| |++-+++ ....++
T Consensus 194 ~gv~~Pv~EI~~icr~~~v~v~~DaAQavG~i---------~vDV~eln~D~~s~s~HK~ygp~~iGaLYvr~-~~~~~~ 263 (428)
T KOG1549 194 IGVLQPVKEIVKICREEGVQVHVDAAQAVGKI---------PVDVQELNADFLSISAHKIYGPPGIGALYVRR-KRPRLR 263 (428)
T ss_pred CCCCCCHHHHHHHHCCCCCEEEEEHHHHCCCC---------CCCHHHCCCHHEEEECCCCCCCCCCEEEEECC-CCCCCC
T ss_conf 42105699999985747807984545434974---------41188858212464325302799606999746-887654
Q ss_pred CCCCCEE--------CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH-HH-HHHHHHHHCCC-----CCC-----CCCC-
Q ss_conf 1211000--------01357750257898878988627102247899-99-99998764179-----789-----9897-
Q gi|254780486|r 253 NYAKPFI--------YTTSPSPILAVVACEALKLIKRKPALHKSLLQ-LI-NITDKIANKKI-----GFS-----SQSH- 311 (381)
Q Consensus 253 ~~~~~~i--------fst~l~P~~~aaa~aal~~l~~~~~~~~~l~~-~~-~~~~~~~~~~~-----g~~-----~~s~- 311 (381)
. .+++. -++...++.+...-++.+++.......+.... .. .+..++..... |.. ....
T Consensus 264 ~-~p~~~GGgq~r~~rsGT~~~~~~~~~gsA~e~~~~~~~~~~~~~~~~~~~ll~~i~~~~~~~~~~G~~~~~~~~~~~~ 342 (428)
T KOG1549 264 V-EPPLSGGGQERGLRSGTVATPLAVGLGSAAEFVNKEMAYDEAIIKRLSEKLLMGIGQSLPEVTLNGSGKSRYPGLVSL 342 (428)
T ss_pred C-CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCCEEE
T ss_conf 4-576467743012205775741354368899998750212589999999999988764073544047860004652366
Q ss_pred EEE----EEECCHHHHH-------------HHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 289----9958979999-------------99999997791898622888888870399962878999999999999999
Q gi|254780486|r 312 IQS----IVIGDNKSCL-------------NIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQ 374 (381)
Q Consensus 312 I~~----v~~gd~~~a~-------------~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~ 374 (381)
.+| ..+.-..+.. +....|+..|... ...+..+||.+....|++|++++++++.+
T Consensus 343 ~~~~~~g~~~~~~~~~~~l~s~~a~~~~~~epsy~l~~~G~~~--------~~~~~~iRis~G~y~t~~di~~~~~~i~~ 414 (428)
T KOG1549 343 SFPYVEGESLLMDLKDVALSSGSACTSASLEPSYVLRAIGVDE--------DLAHSSIRISIGRYTTEEDIDYLVDAIKK 414 (428)
T ss_pred ECCCCCCCCHHHHHHHHHHCCCCHHHCCCCCCCHHHHHCCCCH--------HHHCCEEEEEEEEECCHHHHHHHHHHHHH
T ss_conf 0256557200210104440233054438888621165437423--------22112069863220768999999999999
Q ss_pred HHHH
Q ss_conf 9887
Q gi|254780486|r 375 IISE 378 (381)
Q Consensus 375 v~~E 378 (381)
-.+.
T Consensus 415 ~v~~ 418 (428)
T KOG1549 415 LVSL 418 (428)
T ss_pred HHHH
T ss_conf 9873
No 285
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.54 E-value=1.4e-11 Score=92.24 Aligned_cols=350 Identities=14% Similarity=0.130 Sum_probs=191.6
Q ss_pred HHHHHHHCCCEEEECCC--CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 99999975983999289--7689803446566779889999999999863786887224436885899999999840128
Q gi|254780486|r 12 RLQKIKSKGRHRQLLRR--QDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG 89 (381)
Q Consensus 12 ~l~~~~~~g~~~~~~~~--~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g 89 (381)
.+.++++.........+ .++|-+---| ..+..-|+|++|..+.++.. -+|.+ .++.+++.++-+-..+-+|
T Consensus 6 ~~~~r~~t~s~KWd~~~g~~DvlPmWVAD-MDf~~pp~i~~Al~~rvdhG-vfGY~-----~~~~~~~~ai~~w~~~r~~ 78 (388)
T COG1168 6 TVIERLGTNSLKWDAHPGNEDVLPMWVAD-MDFPTPPEIIEALRERVDHG-VFGYP-----YGSDELYAAIAHWFKQRHQ 78 (388)
T ss_pred HHHHHCCCCCEECCCCCCCCCCCEEEEEC-CCCCCCHHHHHHHHHHHHCC-CCCCC-----CCCHHHHHHHHHHHHHHCC
T ss_conf 55664288750025568988841343200-46788879999999998658-77887-----8877899999999997137
Q ss_pred ---CCCEEEECCCC-HHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC--------CCCHHHHHHHHHHHH
Q ss_conf ---88516741660-245655666316897100454202677526664087640305--------688147899764310
Q gi|254780486|r 90 ---FEKMLYFGSGY-AANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP--------HNNINSFAENINKWR 157 (381)
Q Consensus 90 ---~e~al~~~sG~-~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~--------HnD~~~Le~~l~~~~ 157 (381)
.++.+.|..|- .+-.-+|.++++++|-|++..=+=......++..+.+++.-+ +-|+++||+.+...+
T Consensus 79 ~~i~~e~i~~~p~VVpgi~~~I~~~T~~gd~Vvi~tPvY~PF~~~i~~n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~ 158 (388)
T COG1168 79 WEIKPEWIVFVPGVVPGISLAIRALTKPGDGVVIQTPVYPPFYNAIKLNGRKVIENPLVEDDGRYEIDFDALEKAFVDER 158 (388)
T ss_pred CCCCCCEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHCCCEEEECCCCCCCCCEEECHHHHHHHHHCCC
T ss_conf 77885528983751276999999837699826964888618999875169679746643469847752999999984377
Q ss_pred HCCCCCCCEEEECCCCCCCCCH---HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEH--HCCCCCCCCCCCCC
Q ss_conf 0024786079714621576613---468999998631360898613112223477764011000--01346521001346
Q gi|254780486|r 158 KSGGKGFPWIVVESIYSMDGDK---APLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHII--EERNNVIVMHSCSK 232 (381)
Q Consensus 158 ~~~~~~~~~vv~egv~Sm~G~~---apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~--~~~~~~iv~~TlsK 232 (381)
. +.+|.-..-.. .|.+ ..|.+|.+||.+||+++|.||.|+--+++.+-.-..... ...++.|.+.+=||
T Consensus 159 v-----kl~iLCnPHNP-~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~a~~~it~~saSK 232 (388)
T COG1168 159 V-----KLFILCNPHNP-TGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERFADNSITLTSASK 232 (388)
T ss_pred C-----CEEEEECCCCC-CCCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCHHHCCHHHHCCEEEEEECCC
T ss_conf 6-----08999379999-98643699999999999983998983033566121698766543269554323599840522
Q ss_pred CCCCEE---E-EEECCCCCCC-CCCCCCCCEECCCCCCCCHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHCCC-C
Q ss_conf 565302---6-7524510010-00012110000135775025789887898862-71022478999999998764179-7
Q gi|254780486|r 233 ALGSSG---A-LVGSNKIIYD-YLINYAKPFIYTTSPSPILAVVACEALKLIKR-KPALHKSLLQLINITDKIANKKI-G 305 (381)
Q Consensus 233 a~g~~G---G-~i~~~~~ii~-~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~-~~~~~~~l~~~~~~~~~~~~~~~-g 305 (381)
+|...| + +|..++++.+ +++.-.+ .....+|.....|..++++.-+. -+++.+-++.|..+......+.+ +
T Consensus 233 tFNlaGL~~a~~Ii~n~~lr~~~~~~l~~--~~~~~~n~lg~~A~~aAY~~G~~WLd~L~~yl~~N~~~~~~~l~~~~P~ 310 (388)
T COG1168 233 TFNLAGLKCAYIIISNRELRAKFLKRLKR--NGLHGPSALGIIATEAAYNQGEPWLDELLEYLKDNRDYVADFLNKHLPG 310 (388)
T ss_pred CCCCHHHHHEEEEECCHHHHHHHHHHHHH--HCCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 15604444214783488999999999987--3379984688999999997264999999999999899999999865987
Q ss_pred CC---CC-CCEEEEEECC-HHHHHHHHHHHHHC-CEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 89---98-9728999589-79999999999977-9189862288888887039996287899999999999999998873
Q gi|254780486|r 306 FS---SQ-SHIQSIVIGD-NKSCLNIAKNLQKK-GFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 306 ~~---~~-s~I~~v~~gd-~~~a~~~~~~L~~~-Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
+. .+ +...=+-+.. .....++.+.|+++ +|.+.. .+.=-+.|++-+|+-+ +.+++-+++.++.|+..++..
T Consensus 311 v~v~~p~gTYL~WLD~r~l~l~d~~l~~~ll~~akVal~~-G~~FG~~g~gf~RlN~--acpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 311 VKVTEPQGTYLAWLDCRELGLDDSELAEFLLEEAKVALSP-GSTFGEEGSGFVRLNF--ACPRAILEEALERLKRALKKR 387 (388)
T ss_pred CEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHCEECCC-CCCCCCCCCCEEEEEC--CCCHHHHHHHHHHHHHHHHCC
T ss_conf 4786688756665320023898578999999751571357-8756767874588863--798899999999999998525
No 286
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase; InterPro: IPR006234 These sequences represent O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis..
Probab=99.51 E-value=1e-12 Score=99.37 Aligned_cols=297 Identities=18% Similarity=0.172 Sum_probs=177.5
Q ss_pred HHHHHHHHHHHCC---CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCH
Q ss_conf 9999999986378---6887224436885899999999840128885167416602456556663168971004542026
Q gi|254780486|r 49 REKILSSLDSKIP---IGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHA 125 (381)
Q Consensus 49 ~~a~~~a~~~~~g---~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~Ha 125 (381)
-+.+..|- ++|. -|.-=||.- +|.-...|++||-+=|.|.|+-.+||..|-++++.+|++-||+||.=+-.=.
T Consensus 29 y~~A~~A~-~~FAge~~GfvYsRy~---NPTv~~FE~Rla~LEGAe~A~AtAsGMsAi~A~l~~L~~AGDhvv~sRSlFG 104 (386)
T TIGR01325 29 YDSAADAA-KRFAGEVPGFVYSRYA---NPTVKVFEERLALLEGAERAVATASGMSAILAALMALLSAGDHVVASRSLFG 104 (386)
T ss_pred HCCHHHHH-HHCCCCCCCCEEECCC---CCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECHHC
T ss_conf 10478999-7536768896662269---8615788999997406037886421389999999998616877998510003
Q ss_pred HH---HHHH-HHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECC-CCCCCCCHHHHHHHHHHHHHCCEEEEECC
Q ss_conf 77---5266-6408764030568814789976431000247860797146-21576613468999998631360898613
Q gi|254780486|r 126 SI---REGI-NSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVES-IYSMDGDKAPLDDLVKIANDYDGFIVVDE 200 (381)
Q Consensus 126 Si---~~g~-~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~eg-v~Sm~G~~apL~~i~~l~~~y~~~LivDE 200 (381)
|- ++-. .==|.++....-.|+..+|+.+ ..+++++.+|+ =..| ++++|+.++.||++--|++|+||-
T Consensus 105 st~~~~~~~l~rFGv~v~fv~~~Dl~~WeaA~-------~~nTkl~f~EtPSNPl-~e~~Di~AlaELAHA~GA~lvvDN 176 (386)
T TIGR01325 105 STVVLVSEILPRFGVEVSFVDATDLKAWEAAL-------KPNTKLVFVETPSNPL-AELVDIAALAELAHAVGALLVVDN 176 (386)
T ss_pred CEEEEEECCCCCCCEEEEECCCCCHHHHHHHC-------CCCCCEEEEECCCCHH-HHHHHHHHHHHHHHHCCCEEEEHH
T ss_conf 20021012534354067517867878889856-------9995078863688704-679999999998873341002114
Q ss_pred CCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCC----EEEEEECCCCCCCC-----CCCCCCCEECCCCCCCCHHHH
Q ss_conf 112223477764011000013465210013465653----02675245100100-----001211000013577502578
Q gi|254780486|r 201 AHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGS----SGALVGSNKIIYDY-----LINYAKPFIYTTSPSPILAVV 271 (381)
Q Consensus 201 ah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~----~GG~i~~~~~ii~~-----l~~~~~~~ifst~l~P~~~aa 271 (381)
+-.+=++ ..+ +. ...||++.|=.|..=+ .||.|+|+.++++. +|..++ +|||-.+..
T Consensus 177 ~f~tP~~-qqP------L~-lGaDvvv~SATK~IDGqGRvlGGv~~G~~e~~~~~v~~~lr~~Gp------alSpFNAW~ 242 (386)
T TIGR01325 177 VFATPVL-QQP------LK-LGADVVVYSATKHIDGQGRVLGGVILGSEELMEEFVAKFLRHTGP------ALSPFNAWV 242 (386)
T ss_pred HHHHHHH-CCC------CC-CCCEEEEECCCEEECCCCCEECCEEECCHHHHHHHHHHHHHCCCC------CCCHHHHHH
T ss_conf 5641001-388------64-564079864620113875401214536077753489999742574------323678999
Q ss_pred HHHHHHHHHHCCC-HHHHHHHHHHHHHHHHH---CCCC-CC-------------CCCCEEEEEECCH-HHHHHHHHHHHH
Q ss_conf 9887898862710-22478999999998764---1797-89-------------9897289995897-999999999997
Q gi|254780486|r 272 ACEALKLIKRKPA-LHKSLLQLINITDKIAN---KKIG-FS-------------SQSHIQSIVIGDN-KSCLNIAKNLQK 332 (381)
Q Consensus 272 a~aal~~l~~~~~-~~~~l~~~~~~~~~~~~---~~~g-~~-------------~~s~I~~v~~gd~-~~a~~~~~~L~~ 332 (381)
.++-||.|+=+-+ ......++++++++.-. -.+. ++ +..-+|.+-+.++ .-+++-+-+..+
T Consensus 243 lLkGlETL~lR~~~~~~sAl~lA~~L~~~p~v~~V~Y~~lP~HPq~~lar~Q~~GGG~Vv~f~l~~~edv~~~aAf~~~d 322 (386)
T TIGR01325 243 LLKGLETLSLRVQKQADSALALAEWLEEQPKVQAVYYPGLPDHPQHELARRQQSGGGTVVAFDLKGGEDVAREAAFKVLD 322 (386)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHC
T ss_conf 85034578999986147899999999708955798758787885268999841899679997326864579999999865
Q ss_pred CCEEEE----------EECCC-CC-------------CCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 791898----------62288-88-------------888703999628789999999999999999
Q gi|254780486|r 333 KGFDIR----------AIRPP-TV-------------PINTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 333 ~Gi~v~----------~i~~P-tV-------------p~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
.==+|. .|..| |+ ..+.+.+|++|.. |++|.|.+=+++.
T Consensus 323 ~~~lv~it~NLGD~ks~itHP~TTtHg~~~pe~r~~~gi~~g~vR~SVGL----E~~~DL~~D~~rA 385 (386)
T TIGR01325 323 ALRLVDITNNLGDAKSTITHPATTTHGRMSPEERAAAGIGDGLVRLSVGL----EDVDDLKADLKRA 385 (386)
T ss_pred CEEEEEEECCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEC----CCHHHHHHHHHHC
T ss_conf 61466420452010102018188889998800023125788738998503----8657799999852
No 287
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.51 E-value=6e-12 Score=94.62 Aligned_cols=318 Identities=14% Similarity=0.170 Sum_probs=166.9
Q ss_pred CCCCCC----CCHHHHHHHHHHHHHHCCCC--CCCCCCCCCCCHHHHHHHHHHHHHCCCCCE--EEECCCCHHHHHHHHH
Q ss_conf 656677----98899999999998637868--872244368858999999998401288851--6741660245655666
Q gi|254780486|r 38 DYLALS----SSTLLREKILSSLDSKIPIG--SGGSRLLCGNYNQHLELEEEAADFFGFEKM--LYFGSGYAANMAILST 109 (381)
Q Consensus 38 dYLGl~----~~p~v~~a~~~a~~~~~g~~--~~~sr~~~G~~~~~~~lE~~lA~~~g~e~a--l~~~sG~~An~~~i~~ 109 (381)
+|||-. ..|.+++.....- .|-+. +.-+-.--|.....-+++..++++.|.|.+ -++..+..+..+++.+
T Consensus 71 ~flG~G~y~~~~P~~v~~i~~r~--ef~TaytPYQpE~sQG~Lq~l~e~Q~~l~eLtGmd~~nasl~dga~a~~ea~~ma 148 (449)
T PRK00451 71 SFLGAGAYDHYIPAAVDHIISRS--EFYTAYTPYQPEISQGTLQAIFEYQTMICELTGMDVANASMYDGATALAEAALMA 148 (449)
T ss_pred CCCCCCCCCCCCHHHHHHHHHCC--CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf 60640315786869999987386--5211468998311139999999999999998598746778774778999999999
Q ss_pred H-CCCCCCCCHHHHCCHHHHHH----HHHCCCCCEEECCC-----CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCH
Q ss_conf 3-16897100454202677526----66408764030568-----81478997643100024786079714621576613
Q gi|254780486|r 110 L-PQATDLIVYDKLVHASIREG----INSGKAQAIAIPHN-----NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDK 179 (381)
Q Consensus 110 l-~~~~d~ii~D~~~HaSi~~g----~~ls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ 179 (381)
. ..+.+.|+.+..+|..-..- +...+-+++..+.+ |+++|++.+..- .-.++++-. +..|.+
T Consensus 149 ~r~~~r~~vlv~~s~hP~~~~v~~t~a~~~g~~vv~v~~~~~g~~Dl~~L~~~~~~~------~A~vmi~~P--nt~G~~ 220 (449)
T PRK00451 149 VRITGRNKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYPEDGVTDLEALEAAVDDD------TAAVVVQYP--NFFGVI 220 (449)
T ss_pred HHHCCCCEEEECCCCCCCHHHHHHHHCCCCCCEEEEECCCCCCCCCHHHHHHHCCCC------EEEEEEECC--CCCCCC
T ss_conf 864268739977987842799998630157842798457756666889998641787------589998558--877753
Q ss_pred HHHHHHHHHHHHCCEEEEE-CCCCCCCCCCCCCCEEEEEHHCCCCCCCCCC-----CCCCCCC-EEEEEECCCCCCCCCC
Q ss_conf 4689999986313608986-1311222347776401100001346521001-----3465653-0267524510010000
Q gi|254780486|r 180 APLDDLVKIANDYDGFIVV-DEAHATGVCGPLGKGLTHIIEERNNVIVMHS-----CSKALGS-SGALVGSNKIIYDYLI 252 (381)
Q Consensus 180 apL~~i~~l~~~y~~~Liv-DEah~~Gv~G~~G~G~~~~~~~~~~~iv~~T-----lsKa~g~-~GG~i~~~~~ii~~l~ 252 (381)
-++++|.+++++.|+++++ -+.-++|.+-+- |....+|++|. +-|.||+ .+||++++++++.++-
T Consensus 221 edi~~i~~~vh~~g~l~~~~~n~~aLg~l~~P--------Ge~GaDIvvg~~q~lg~p~~fGGP~~G~~a~~~~l~r~lP 292 (449)
T PRK00451 221 EDLEEIAEIAHAGGALFIVVVDPVSLGLLKPP--------GEYGADIVVGEGQPLGIPLSFGGPYLGFFATRKKLVRQMP 292 (449)
T ss_pred CCHHHHHHHHHHCCCEEEEEECHHHHHCCCCC--------CCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 16999999998659749997167886076784--------4345406862476667786678998787055650010289
Q ss_pred C---------CC-CCEECC-------------CC--C-CCCHHHHHHHHHHHHHHCC-CH---HHHHHHHHHHHHHHHHC
Q ss_conf 1---------21-100001-------------35--7-7502578988789886271-02---24789999999987641
Q gi|254780486|r 253 N---------YA-KPFIYT-------------TS--P-SPILAVVACEALKLIKRKP-AL---HKSLLQLINITDKIANK 302 (381)
Q Consensus 253 ~---------~~-~~~ifs-------------t~--l-~P~~~aaa~aal~~l~~~~-~~---~~~l~~~~~~~~~~~~~ 302 (381)
- .+ ++|+-+ |+ . +...+ +..++.=+..-.+ .+ -+....+++|..+...+
T Consensus 293 griVG~t~D~~G~~~y~LtLqtREQhIrReKAtSnIctnq~l~-a~~a~~Yi~~lG~~GLk~va~~a~~nAnyl~~~L~~ 371 (449)
T PRK00451 293 GRLVGETVDVDGKRGFVLTLQAREQHIRREKATSNICTNQALC-ALAATIYMSLLGKEGLREVAEQNHQKAHYLAERLAE 371 (449)
T ss_pred CCCCCCCCCCCCCCCEECCCCCCHHHCCCCCCCCCCCCCHHHH-HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 8766721367886120113455322234555546666422788-999999999759766999999999999999999873
Q ss_pred CCCCC--CCCC-EEEEEECCHHHHHHHHHHHHHCCEEEE---EECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 79789--9897-289995897999999999997791898---62288888887039996287899999999999999998
Q gi|254780486|r 303 KIGFS--SQSH-IQSIVIGDNKSCLNIAKNLQKKGFDIR---AIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 303 ~~g~~--~~s~-I~~v~~gd~~~a~~~~~~L~~~Gi~v~---~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
.-+++ .+.+ .--+.+..+..+.++.++|+++||+.. ...||-++ ..+=|++|=.+|++|||+++++|++|+
T Consensus 372 ~~~~~~~~~~~~f~Efv~~~~~~a~~i~k~L~~~gi~~g~~lt~~~p~~~---~~lmi~~TEt~sk~dlD~~v~al~eil 448 (449)
T PRK00451 372 IGGVEVLFNGPFFNEFVVRLPKPAEEVNEALLEKGILGGYDLGRYYPELG---NSLLVAVTELRTKEDIDALVEALGEVL 448 (449)
T ss_pred CCCEECCCCCCEEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCC---CEEEEECCCCCCHHHHHHHHHHHHHHH
T ss_conf 79834168998025899978988999999999769978988544277889---979997078999999999999999986
Q ss_pred H
Q ss_conf 8
Q gi|254780486|r 377 S 377 (381)
Q Consensus 377 ~ 377 (381)
+
T Consensus 449 a 449 (449)
T PRK00451 449 A 449 (449)
T ss_pred C
T ss_conf 9
No 288
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.47 E-value=5.9e-11 Score=88.44 Aligned_cols=349 Identities=17% Similarity=0.212 Sum_probs=203.4
Q ss_pred HHHHHHHHCCCEEEECCCC-EEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
Q ss_conf 9999999759839992897-689803446566779889999999999863786887224436885899999999840128
Q gi|254780486|r 11 ERLQKIKSKGRHRQLLRRQ-DIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG 89 (381)
Q Consensus 11 ~~l~~~~~~g~~~~~~~~~-~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g 89 (381)
+|.+.++..|-.--..+.. =++|+-+-+=-| +.......++. .---+..|||-+ ..||+.+.+++|
T Consensus 1 eR~~al~~agyN~F~L~s~dV~iDLLTDSGT~-----AMSd~QWAa~m-~gDesYAGs~sf-------~~l~~av~d~~g 67 (431)
T cd00617 1 ERERALKEAGYNVFLLRSEDVYIDLLTDSGTG-----AMSDYQWAAMM-LGDEAYAGSKSF-------YDLEDAVQDLFG 67 (431)
T ss_pred CHHHHHHHCCCCCCCCCCCCEEEEEEECCCCC-----CCCHHHHHHHH-CCCHHHCCCCCH-------HHHHHHHHHHCC
T ss_conf 95799987499823587476679701358966-----58889999987-056532578028-------999999998649
Q ss_pred CCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHH-HHHCC--------------CCCEEECCC-CHHHHHHHH
Q ss_conf 88516741660245655666316897100454202677526-66408--------------764030568-814789976
Q gi|254780486|r 90 FEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREG-INSGK--------------AQAIAIPHN-NINSFAENI 153 (381)
Q Consensus 90 ~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g-~~ls~--------------a~~~~f~Hn-D~~~Le~~l 153 (381)
++..+...+|-.|-.-+++++.+|+++|++ +.|.--..+ +.+.+ ....+||-| |++.|++.+
T Consensus 68 ~~~v~PtHQGRaAE~iLf~~~~k~g~~v~~--N~hFdTTrahie~~G~~~vdl~~~ea~d~~~~~pFKGN~Dl~kLe~~i 145 (431)
T cd00617 68 FKHIIPTHQGRGAENILFSILLKPGRTVPS--NMHFDTTRGHIEANGAVPVDLVIDEAHDAQELIPFKGNIDVAKLEKLI 145 (431)
T ss_pred CCCEEECCCCHHHHHHHHHHHCCCCCEECC--CCCCCCHHHHHHHCCCEEEECCCHHCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 971247687679999999983679988446--878732589999769978733150004857778848888999999999
Q ss_pred HHHHHCCCCCCCEEEEC-CCCCCCC---CHHHHHHHHHHHHHCCEEEEECCCCCC---CCCCCCCCEEEE---------E
Q ss_conf 43100024786079714-6215766---134689999986313608986131122---234777640110---------0
Q gi|254780486|r 154 NKWRKSGGKGFPWIVVE-SIYSMDG---DKAPLDDLVKIANDYDGFIVVDEAHAT---GVCGPLGKGLTH---------I 217 (381)
Q Consensus 154 ~~~~~~~~~~~~~vv~e-gv~Sm~G---~~apL~~i~~l~~~y~~~LivDEah~~---Gv~G~~G~G~~~---------~ 217 (381)
+++.. ...++|+++ +-.|..| ++++++++.++|++||..|++|-+--. =++-.+-.|+.+ .
T Consensus 146 ~~~g~---~~I~~v~~tiTnN~~GGQPVSm~Nir~v~~la~~~giplvlDaaRfaENAyFIk~rE~gy~d~si~eI~rEm 222 (431)
T cd00617 146 DEVGA---ENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAENAYFIKEREEGYRDKSIAEIAREM 222 (431)
T ss_pred HHHCC---CCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHH
T ss_conf 87386---661089999863687885667899999999999809979987667887689998435302479999999999
Q ss_pred HHCCCCCCCCCCCCC-CCCCEEEEEECCC-CCCCCCCCCCC---CE-ECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH
Q ss_conf 001346521001346-5653026752451-00100001211---00-001357750257898878988627102247899
Q gi|254780486|r 218 IEERNNVIVMHSCSK-ALGSSGALVGSNK-IIYDYLINYAK---PF-IYTTSPSPILAVVACEALKLIKRKPALHKSLLQ 291 (381)
Q Consensus 218 ~~~~~~~iv~~TlsK-a~g~~GG~i~~~~-~ii~~l~~~~~---~~-ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~ 291 (381)
+.. -+.++.|.-| ++.-.||+++-+. ++.+..++..- +| .| ++|+---..|....|+-.-+++.++.+..+
T Consensus 223 fs~--aDg~tmSaKKD~~vniGG~ia~~D~~l~~~~~~~~i~~EGf~TY-GGlaGRD~eAlA~GL~E~~d~~yl~~Ri~q 299 (431)
T cd00617 223 FSY--ADGCTMSAKKDGLVNIGGFLALRDDELYEEARQRVVLYEGFVTY-GGMAGRDMEALAQGLREAVEEDYLRHRVEQ 299 (431)
T ss_pred HHH--HHEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHHCCHHHHCCHHHHHHHHHH
T ss_conf 854--02789970314532455678857799999997543200587443-563253499986540754367999977999
Q ss_pred HHHHHHHHHHCCCCC--CCCCCEEEEEE--------CCHHHHHHHHHHHH-HCCEEEEE---E---CCCCC----CCCCC
Q ss_conf 999999876417978--99897289995--------89799999999999-77918986---2---28888----88870
Q gi|254780486|r 292 LINITDKIANKKIGF--SSQSHIQSIVI--------GDNKSCLNIAKNLQ-KKGFDIRA---I---RPPTV----PINTA 350 (381)
Q Consensus 292 ~~~~~~~~~~~~~g~--~~~s~I~~v~~--------gd~~~a~~~~~~L~-~~Gi~v~~---i---~~PtV----p~~~~ 350 (381)
...+-+++...++++ +...+-+.|-. .+.-.+..++.+|. +-||...- + +-|-. |..-+
T Consensus 300 v~yL~~~L~~~GvPvv~P~GGHav~iDA~~flPhip~~~fPa~aLa~~LY~~~GIR~~E~Gs~~~grd~~t~e~~~~~~E 379 (431)
T cd00617 300 VRYLGDRLDEAGVPIVEPAGGHAVFIDAREFLPHIPQEQFPAQALAAELYLEAGVRAVELGIFSAGRDPNTGENKYPELE 379 (431)
T ss_pred HHHHHHHHHHCCCCEECCCCCEEEEEEHHHHCCCCCHHHCCHHHHHHHHHHHCCCCEEEECCEECCCCCCCCCCCCCCCC
T ss_conf 99999999988996666897438997467746899814391899999999970945685402002548887666788622
Q ss_pred EEEEEC-CCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 399962-878999999999999999988738
Q gi|254780486|r 351 RLRISI-TLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 351 rlRi~v-~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
.+|+++ ....|.+++|..++++.++.+.-+
T Consensus 380 lvRLAiPRRvYT~~H~dyva~~l~~l~~~r~ 410 (431)
T cd00617 380 LVRLAIPRRVYTQDHMDYVAAAVIALYERRE 410 (431)
T ss_pred EEEEECCCHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 2567135020358799999999999995587
No 289
>KOG0053 consensus
Probab=99.47 E-value=1.6e-11 Score=91.89 Aligned_cols=285 Identities=19% Similarity=0.229 Sum_probs=164.8
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCH-HHHCCHH--HHHH-HHHCCCCCEEECCCCHHHH
Q ss_conf 5899999999840128885167416602456556663168971004-5420267--7526-6640876403056881478
Q gi|254780486|r 74 YNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVY-DKLVHAS--IREG-INSGKAQAIAIPHNNINSF 149 (381)
Q Consensus 74 ~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~-D~~~HaS--i~~g-~~ls~a~~~~f~HnD~~~L 149 (381)
.+.-..||+.++++.|.+.+++|+||..|--.++..|...++.|++ |-..+.. +..- ..-.+.... +-|++++
T Consensus 76 nPt~~~le~~iaal~ga~~~l~fsSGmaA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~---~vd~~~~ 152 (409)
T KOG0053 76 NPTRDVLESGIAALEGAAHALLFSSGMAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGD---FVDVDDL 152 (409)
T ss_pred CCCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCEEE---EECHHHH
T ss_conf 9966899999998718863899344078999999984678985897178750099999999997093543---3041667
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCC
Q ss_conf 99764310002478607971462157661346899999863136089861311222347776401100001346521001
Q gi|254780486|r 150 AENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHS 229 (381)
Q Consensus 150 e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~T 229 (381)
+..+..... +..+|.+|+.-.=...++|++++.++|++||++++||+.-+.++ .+..+ ....+|++.|
T Consensus 153 ~~~~~~i~~----~t~~V~~ESPsNPll~v~DI~~l~~la~~~g~~vvVDnTf~~p~-------~~~pL-~lGADIV~hS 220 (409)
T KOG0053 153 KKILKAIKE----NTKAVFLESPSNPLLKVPDIEKLARLAHKYGFLVVVDNTFGSPY-------NQDPL-PLGADIVVHS 220 (409)
T ss_pred HHHHHHHCC----CCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCCCCC-------CCCHH-HCCCCEEEEE
T ss_conf 889986266----70699997799975004569999998741797899957767633-------36712-1388789985
Q ss_pred CCCCCCC----EEEEEECC-CCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHHHHC-
Q ss_conf 3465653----02675245-10010000121100001357750257898878988627-10224789999999987641-
Q gi|254780486|r 230 CSKALGS----SGALVGSN-KIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKIANK- 302 (381)
Q Consensus 230 lsKa~g~----~GG~i~~~-~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~~~~- 302 (381)
..|-||+ .||.++.+ .++...++..-... ...++|..+.-....++.+.-+ .+..+.+...+.+....-..
T Consensus 221 aTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~l--g~~~~p~~~~ll~Rglktl~lRi~~~~ena~~~A~~Le~~~~v~ 298 (409)
T KOG0053 221 ATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDL--GWCEDPFDLFLLSRGLKTLHLRINKHSENALKIALLLEAHPKVK 298 (409)
T ss_pred EEEEECCCCCEEEEEEECCCHHHHHHHHHHHHHH--CCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 1014447766351477617499999999999985--57998899999866841554049888878999998765088536
Q ss_pred ---CCCCCC-------------C-CCEEEEEECCHHHHHHHHHHHH--HCCEEE----EEECCCCCC-------------
Q ss_conf ---797899-------------8-9728999589799999999999--779189----862288888-------------
Q gi|254780486|r 303 ---KIGFSS-------------Q-SHIQSIVIGDNKSCLNIAKNLQ--KKGFDI----RAIRPPTVP------------- 346 (381)
Q Consensus 303 ---~~g~~~-------------~-s~I~~v~~gd~~~a~~~~~~L~--~~Gi~v----~~i~~PtVp------------- 346 (381)
..|+++ . +.+.++..++...+.++.+.|. ..+.-. +-+.+|+.-
T Consensus 299 kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~~~~a~kf~~~LK~~~~a~SlG~~eSL~~~p~~mth~~~~e~~~~~G 378 (409)
T KOG0053 299 KVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGNEEHAKKFYDALKLFTKAPSLGGNESLAEPPAIMTHASELEEREKFG 378 (409)
T ss_pred EEECCCCCCCCCHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHHCCCCCHHHHHHCC
T ss_conf 89758988882477787553488534899972888999999975235410567676134421345644478877887459
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 887039996287899999999999999998873
Q gi|254780486|r 347 INTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 347 ~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
.-...+|+++.. |+++.++..|.++++..
T Consensus 379 i~~~LVRvSVGi----Ed~~dL~~d~~~Al~~~ 407 (409)
T KOG0053 379 IDPNLVRVSVGI----EDIEDLIKDFQQALEKA 407 (409)
T ss_pred CCCCCEEEEECC----CCHHHHHHHHHHHHHHH
T ss_conf 998807999356----77999999999999862
No 290
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases; InterPro: IPR005958 This entry describes tyrosine aminotransferase (2.6.1.5 from EC) as found in animals and Trypanosoma cruzi (Euglenozoa). It is the first enzyme of a pathway of tyrosine degradation via homogentisate. L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway are included in this family. ; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding, 0006519 amino acid and derivative metabolic process.
Probab=99.45 E-value=1.4e-10 Score=86.18 Aligned_cols=318 Identities=14% Similarity=0.144 Sum_probs=188.2
Q ss_pred CCEEEECCCCC---CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH----------HHCCCCCEE
Q ss_conf 97689803446---56677988999999999986378688722443688589999999984----------012888516
Q gi|254780486|r 28 RQDIWDFTSHD---YLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAA----------DFFGFEKML 94 (381)
Q Consensus 28 ~~~~l~f~s~d---YLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA----------~~~g~e~al 94 (381)
+|.+|-++-=| |=.|-+.++..+|+.++++..-.-|.+.|- |....-++.-+.++ .=+..++.+
T Consensus 37 ~Kp~i~L~~GDPs~f~~lrT~~ea~~Av~~al~Sg~~NgYap~~---G~~~AR~AvA~y~~~sfvhn~~~~~~l~a~DV~ 113 (424)
T TIGR01265 37 VKPVIPLSHGDPSVFGNLRTAPEAEEAVKDALRSGKFNGYAPSV---GALAAREAVAEYLSNSFVHNQRLPGKLSADDVV 113 (424)
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCC---CHHHHHHHHHHHHHCCEEECCCCCCCCCCCCEE
T ss_conf 83001588878887778888789999999998347856766436---867888999999662221257888875766448
Q ss_pred EECCCCHHHHHHHHHHC-CCCCCCCHHHHCCHHHHHH-HHHCCCCCEEECC----C----CHHHHHHHHHHHHHCCCCCC
Q ss_conf 74166024565566631-6897100454202677526-6640876403056----8----81478997643100024786
Q gi|254780486|r 95 YFGSGYAANMAILSTLP-QATDLIVYDKLVHASIREG-INSGKAQAIAIPH----N----NINSFAENINKWRKSGGKGF 164 (381)
Q Consensus 95 ~~~sG~~An~~~i~~l~-~~~d~ii~D~~~HaSi~~g-~~ls~a~~~~f~H----n----D~~~Le~~l~~~~~~~~~~~ 164 (381)
+++.|.+|-+-+|.+|+ .+|+-|+.-+=- .++++. |+.++-.++.|.= + |++.||++.++ ++.
T Consensus 114 ltsGCsqAIe~~I~aLA~~pG~NILvPRPG-fP~Y~t~A~~~~lEvr~ydLdlPe~~WeiDL~~le~l~De------kT~ 186 (424)
T TIGR01265 114 LTSGCSQAIEIVIEALAQNPGANILVPRPG-FPLYDTRAAFSGLEVRLYDLDLPEKDWEIDLDGLESLADE------KTV 186 (424)
T ss_pred EECCCHHHHHHHHHHHHCCCCCCEECCCCC-CCCHHHHHHHCCCCCCCCCCCCCCCCCEECHHHHHHHHCC------CCE
T ss_conf 847722689999999726898835568777-8668999977187200024678887523647899876326------876
Q ss_pred CEEEEC------CCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCC-CCCEEE---EEHHCCCCCCCCCCCCCCC
Q ss_conf 079714------621576613468999998631360898613112223477-764011---0000134652100134656
Q gi|254780486|r 165 PWIVVE------SIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGP-LGKGLT---HIIEERNNVIVMHSCSKAL 234 (381)
Q Consensus 165 ~~vv~e------gv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~-~G~G~~---~~~~~~~~~iv~~TlsKa~ 234 (381)
.+||+- +|||- -=|++|+++|+|++.++|-||+++--|||. ...-.. -.+...--+|..|++||.+
T Consensus 187 A~vv~NP~NPCGsVF~~----~HL~k~~~~A~kl~i~iIADEiY~~~Vf~dkDPn~~F~p~a~f~~~VPvl~lGgisKrW 262 (424)
T TIGR01265 187 AIVVINPSNPCGSVFSR----DHLEKIAEVARKLGIPIIADEIYGHLVFGDKDPNAPFVPMASFASIVPVLSLGGISKRW 262 (424)
T ss_pred EEEEECCCCCCCCCCCH----HHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHCCC
T ss_conf 99984756678888788----88999999998709826877631641448897888622300357868868863101123
Q ss_pred CCEE---EEEECC--------CCCCCCCCCCCCCEECCCCCCCCHHHHHHHHH-HHHHHCC-----CHHHHHHHHHHHHH
Q ss_conf 5302---675245--------10010000121100001357750257898878-9886271-----02247899999999
Q gi|254780486|r 235 GSSG---ALVGSN--------KIIYDYLINYAKPFIYTTSPSPILAVVACEAL-KLIKRKP-----ALHKSLLQLINITD 297 (381)
Q Consensus 235 g~~G---G~i~~~--------~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal-~~l~~~~-----~~~~~l~~~~~~~~ 297 (381)
=.-| |+|+-. ..+.+-|.+...- .+-| +.-++.|| ++|++.| ...+.+++++.+..
T Consensus 263 ~VPGWRlGWi~~~Dp~gi~~~~k~~~gl~~~~~~-----~~gP--~Ti~QgALP~IL~~Tp~efF~~~~~~lk~na~l~y 335 (424)
T TIGR01265 263 VVPGWRLGWIIVHDPHGILRDTKVLQGLKNVLQL-----ILGP--ATIVQGALPDILENTPQEFFDKKISVLKENAELCY 335 (424)
T ss_pred CCCCCEEEEEEEECCCCCCCCCCHHHHHHHHHCC-----CCCC--HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 2776224327788887754444033898998423-----4781--57899999999851687688999999885188999
Q ss_pred HHHHCCCCCCCCC-CEE--EEE-------ECCHHHHHHHHHHHH-HCCEEE---EEECCCCCCCCCCEEEEECCCCCCHH
Q ss_conf 8764179789989-728--999-------589799999999999-779189---86228888888703999628789999
Q gi|254780486|r 298 KIANKKIGFSSQS-HIQ--SIV-------IGDNKSCLNIAKNLQ-KKGFDI---RAIRPPTVPINTARLRISITLNVDEP 363 (381)
Q Consensus 298 ~~~~~~~g~~~~s-~I~--~v~-------~gd~~~a~~~~~~L~-~~Gi~v---~~i~~PtVp~~~~rlRi~v~a~~t~e 363 (381)
+....--++...- |-- .+| +.|-+.-.+|+++|. |+-+++ +++.+| .-+||+++- ..+
T Consensus 336 ~~L~~ipg~~c~~KP~G~MY~mvkl~~~~~~~ikdD~dFc~kL~~EESv~~LPG~~f~~p------nw~Rit~t~--~~~ 407 (424)
T TIGR01265 336 EELKDIPGLTCPKKPEGSMYLMVKLELELLEEIKDDVDFCEKLVKEESVICLPGSAFGLP------NWVRITITV--PKS 407 (424)
T ss_pred HHHHCCCCCCCCCCCCCCEEEHHHCCHHHCCCCCCCHHHHHHHHHHCCCEECCCEEECCC------CCEEEEECC--CHH
T ss_conf 997348876476488875000201016534464641899999987376335460025599------847998527--677
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999999
Q gi|254780486|r 364 TIVKLFDILPQ 374 (381)
Q Consensus 364 di~~~~~~l~~ 374 (381)
.++..++.|++
T Consensus 408 ~~~Ea~~Rik~ 418 (424)
T TIGR01265 408 MLEEALERIKE 418 (424)
T ss_pred HHHHHHHHHHH
T ss_conf 89999999987
No 291
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.45 E-value=8.1e-11 Score=87.58 Aligned_cols=331 Identities=16% Similarity=0.195 Sum_probs=185.8
Q ss_pred CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCC-CCCCCCHHHHHHHHHHHHHCCCCCEEEEC-CCCHH---H
Q ss_conf 7689803446566779889999999999863786887224-43688589999999984012888516741-66024---5
Q gi|254780486|r 29 QDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSR-LLCGNYNQHLELEEEAADFFGFEKMLYFG-SGYAA---N 103 (381)
Q Consensus 29 ~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr-~~~G~~~~~~~lE~~lA~~~g~e~al~~~-sG~~A---n 103 (381)
..++-++||- +--+|.+.+....-- ..-..++..+- ..-|+..+.-+||+.|++..|++.+-+.| +|.++ .
T Consensus 72 ~~~~pLGSCT---MKyNp~~~e~~a~~p-~f~~~HP~qp~~~~QG~Lq~i~elq~~L~eITGmd~vSlqP~aGAqGE~aG 147 (490)
T PRK04366 72 TGFYPLGSCT---MKYNPKINEKVARLP-GFAELHPLQPEETVQGALELMYELQEWLKEITGMDAVTLQPAAGAHGELTG 147 (490)
T ss_pred CCCEECCCCC---CCCCHHHHHHHHCCH-HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHH
T ss_conf 5630565121---544879885774284-355269999878889999999999999999859985840689855999999
Q ss_pred HHHHHHHC-----CCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCC-----CHHHHHHHHHHHHHCCCCCCCEEEECCCC
Q ss_conf 65566631-----689710045420267752666408764030568-----81478997643100024786079714621
Q gi|254780486|r 104 MAILSTLP-----QATDLIVYDKLVHASIREGINSGKAQAIAIPHN-----NINSFAENINKWRKSGGKGFPWIVVESIY 173 (381)
Q Consensus 104 ~~~i~~l~-----~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~~vv~egv~ 173 (381)
+.+|.+.- .+.+.|++-..+|.+=---+.++|-+++.++-+ |+++|++++...- -.+.++-.
T Consensus 148 ll~Irayh~~~G~~~R~~vLiP~SAHGTNPAsA~maG~~Vv~v~~~~~G~vDle~Lka~~~~~~------A~lMiTnP-- 219 (490)
T PRK04366 148 LLIIRAYHEARGDTKRTEVIVPDSAHGTNPASAAMAGFKVVEIPSNEDGLVDLEALKAAVGEDT------AALMLTNP-- 219 (490)
T ss_pred HHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHH------HEEEEECC--
T ss_conf 9999999997598577679985556789878887559446882579899819999999875310------31355157--
Q ss_pred CCCCCHH-HHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCC----CEE---EEEECCC
Q ss_conf 5766134-6899999863136089861311222347776401100001346521001346565----302---6752451
Q gi|254780486|r 174 SMDGDKA-PLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALG----SSG---ALVGSNK 245 (381)
Q Consensus 174 Sm~G~~a-pL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g----~~G---G~i~~~~ 245 (381)
|.-|-+- .+++|+++.+++|++++.|-|--=+++|..--| ....+++--.|-|.|+ +.| |.|+.++
T Consensus 220 nt~GvfE~~i~ei~~ivH~~Ggl~Y~DGANlNAi~G~~rPg------d~G~Dv~HlNLHKTFstPHGGGGPG~Gpv~v~~ 293 (490)
T PRK04366 220 NTLGLFERNIKEIAEIVHEAGGLLYYDGANLNAILGKVRPG------DMGFDVVHLNLHKTFSTPHGGGGPGSGPVGVKK 293 (490)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCHH------HCCCCEEEEECCCCCCCCCCCCCCCCCCEEHHH
T ss_conf 65360224899999999971998986575620001314776------658745753134234457888888877532554
Q ss_pred CCCCCCCC-----CCCCEECCCCCC---------CCHHHHHHHHHHHHHHC--CCHH---HHHHHHHHHHHHHHHCCCCC
Q ss_conf 00100001-----211000013577---------50257898878988627--1022---47899999999876417978
Q gi|254780486|r 246 IIYDYLIN-----YAKPFIYTTSPS---------PILAVVACEALKLIKRK--PALH---KSLLQLINITDKIANKKIGF 306 (381)
Q Consensus 246 ~ii~~l~~-----~~~~~ifst~l~---------P~~~aaa~aal~~l~~~--~~~~---~~l~~~~~~~~~~~~~~~g~ 306 (381)
.+..+|-. .+..|......+ .-.+.....++-.++.- +.++ +....|++|..+.....+.+
T Consensus 294 ~L~pfLP~P~v~~~~~~y~l~~~~~~siG~v~~f~Gn~~vl~ra~~Yi~~lG~~GL~~~s~~AvLNANYl~~~L~~~~~~ 373 (490)
T PRK04366 294 ELAPFLPVPVVEKDGGRYRLDYDRPKSIGRVRAFYGNFGVLVRAYAYIRSLGAEGLREVSEDAVLNANYLMARLKDVYDL 373 (490)
T ss_pred HHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_conf 41200888702136883112678876632112024751889999999998667478999999999999999985355757
Q ss_pred CCCC-CEEEEEECCH-------HHHHHHHHHHHHCCEEEEEECCCC-CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 9989-7289995897-------999999999997791898622888-888870399962878999999999999999988
Q gi|254780486|r 307 SSQS-HIQSIVIGDN-------KSCLNIAKNLQKKGFDIRAIRPPT-VPINTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 307 ~~~s-~I~~v~~gd~-------~~a~~~~~~L~~~Gi~v~~i~~Pt-Vp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
.-+. ..--+++... -.+.+++++|++.|+...-+-||- ||. -+=|-+|=..+++++|++++++.++.+
T Consensus 374 ~y~~~~~HEfv~~~~~~~k~~gv~~~DiaKrLlDyG~H~pT~~fPliV~e---~lmiEPTEsEske~LD~f~~am~~I~~ 450 (490)
T PRK04366 374 PYPRRCMHEFVLSGKRLKKETGVRALDIAKRLLDYGFHPPTIYFPLIVPE---ALMIEPTETESKETLDAFIDAMKEIAE 450 (490)
T ss_pred CCCCCEEEEEEECCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC---CEEECCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 88997678999643775442399899999998577999761016665787---315367577799999999999999999
Q ss_pred HHC
Q ss_conf 738
Q gi|254780486|r 378 EGN 380 (381)
Q Consensus 378 E~~ 380 (381)
|..
T Consensus 451 ea~ 453 (490)
T PRK04366 451 EAK 453 (490)
T ss_pred HHH
T ss_conf 998
No 292
>PRK13238 tnaA tryptophanase; Provisional
Probab=99.45 E-value=2.8e-10 Score=84.23 Aligned_cols=354 Identities=18% Similarity=0.185 Sum_probs=207.4
Q ss_pred HHHHHHHHHHHHHHCCCEEEECCC-CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 578999999999975983999289-7689803446566779889999999999863786887224436885899999999
Q gi|254780486|r 5 QMSFYEERLQKIKSKGRHRQLLRR-QDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEE 83 (381)
Q Consensus 5 ~~~~~~~~l~~~~~~g~~~~~~~~-~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~ 83 (381)
++.--++|.+.++..|-.--..+. .-++|+-+-+= --+..+....++. +---+..|||- +..||+.
T Consensus 20 ~~~treeR~~al~~AgyN~F~L~s~dV~IDlLTDSG-----T~AMSd~Qwaamm-~gDEsYAGs~s-------f~~l~~a 86 (461)
T PRK13238 20 RLTTREEREEALKEAGYNPFLLKSEDVFIDLLTDSG-----TGAMSDRQWAAMM-RGDEAYAGSRS-------YYRLEDA 86 (461)
T ss_pred CCCCHHHHHHHHHHCCCCEECCCCCCEEEEEEECCC-----CCCCCHHHHHHHH-HHHHHHHCCHH-------HHHHHHH
T ss_conf 899999999999982898521664663576421588-----1304599999998-42234313554-------9999999
Q ss_pred HHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHH-HHHCC--------------CCCEEECCC-CHH
Q ss_conf 84012888516741660245655666316897100454202677526-66408--------------764030568-814
Q gi|254780486|r 84 AADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREG-INSGK--------------AQAIAIPHN-NIN 147 (381)
Q Consensus 84 lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g-~~ls~--------------a~~~~f~Hn-D~~ 147 (381)
+.+.+|.+..+-..-|-.|-.-+++.+.+++++|.+ +.|.---.| +.+.+ ....+||-| |++
T Consensus 87 v~di~G~~~~iPtHQGRaAE~Ilf~~l~k~g~~vp~--N~HFdTTrahie~~G~~~~dl~~~ea~d~~~~~pFKGN~Dl~ 164 (461)
T PRK13238 87 VKDIFGYEYTIPTHQGRAAEQILFPVLIKKGDVVPS--NYHFDTTRAHIELNGGTAVNLVIDEALDTGSRYPFKGNFDLE 164 (461)
T ss_pred HHHHCCCCEECCCCCCHHHHHHHHHHHCCCCCEECC--CCCCCCCHHHHHHCCCEEEEEECHHHCCCCCCCCCCCCCCHH
T ss_conf 998729864454566377999999986469978578--878565078888539867730544314957678978877999
Q ss_pred HHHHHHHHHHHCCCCCCCEEEEC-CCCCCCC---CHHHHHHHHHHHHHCCEEEEECCCCC-C--CCCCCCCCEEEEE---
Q ss_conf 78997643100024786079714-6215766---13468999998631360898613112-2--2347776401100---
Q gi|254780486|r 148 SFAENINKWRKSGGKGFPWIVVE-SIYSMDG---DKAPLDDLVKIANDYDGFIVVDEAHA-T--GVCGPLGKGLTHI--- 217 (381)
Q Consensus 148 ~Le~~l~~~~~~~~~~~~~vv~e-gv~Sm~G---~~apL~~i~~l~~~y~~~LivDEah~-~--Gv~G~~G~G~~~~--- 217 (381)
.|++.++++.. .+.++|+++ +-.|..| ++++++++.+||++||..+++|-+-- - =++-.+-.|+.+.
T Consensus 165 kLe~~i~~~g~---~~I~~v~~tiTnN~~GGQPVSm~Nir~v~~la~~~~ip~~lDaaRfaENAyFIk~RE~gY~d~si~ 241 (461)
T PRK13238 165 KLEALIEEVGA---DNIPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVLDAARFAENAYFIKQREPGYKDKSIK 241 (461)
T ss_pred HHHHHHHHHCC---CCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHH
T ss_conf 99999987384---465489999862687881646899999999999829959986566766457887325312579999
Q ss_pred ------HHCCCCCCCCCCCCC-CCCCEEEEEECCC--CCCCCCCCCCC---CE-ECCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf ------001346521001346-5653026752451--00100001211---00-00135775025789887898862710
Q gi|254780486|r 218 ------IEERNNVIVMHSCSK-ALGSSGALVGSNK--IIYDYLINYAK---PF-IYTTSPSPILAVVACEALKLIKRKPA 284 (381)
Q Consensus 218 ------~~~~~~~iv~~TlsK-a~g~~GG~i~~~~--~ii~~l~~~~~---~~-ifst~l~P~~~aaa~aal~~l~~~~~ 284 (381)
+.. -+.++-|.-| +++-.||+++-+. ++-+..++... +| .| ++|+---+.|....|+-.-+++.
T Consensus 242 eI~rEmfs~--aDg~tmSaKKD~~vniGG~l~~~d~~~l~~~~~~~~i~~EGf~TY-GGlaGRDmeAlAvGL~E~~d~dy 318 (461)
T PRK13238 242 EITREMFSY--ADGLTMSAKKDAMVNIGGLLCFKDDSDLYTKCRTLCILYEGFPTY-GGLAGRDMEALAVGLYEGMDEDY 318 (461)
T ss_pred HHHHHHHHH--HHEEEEEECCCCEECCCCEEEECCHHHHHHHHHHHEEECCCCCCC-CCCCHHHHHHHHCCHHHHCCHHH
T ss_conf 999999845--237999833012104422899667599999987442420587566-88338779999735787607799
Q ss_pred HHHHHHHHHHHHHHHHHCCCCC--CCCCCEEEEEE-------C-CHHHHHHHHHHHH-HCCEEEEEE------CCCCCCC
Q ss_conf 2247899999999876417978--99897289995-------8-9799999999999-779189862------2888888
Q gi|254780486|r 285 LHKSLLQLINITDKIANKKIGF--SSQSHIQSIVI-------G-DNKSCLNIAKNLQ-KKGFDIRAI------RPPTVPI 347 (381)
Q Consensus 285 ~~~~l~~~~~~~~~~~~~~~g~--~~~s~I~~v~~-------g-d~~~a~~~~~~L~-~~Gi~v~~i------~~PtVp~ 347 (381)
++.+..+...+-+++...++++ +...+-+.|-. + +.-.+..++.+|. +-||...-+ +-|-+..
T Consensus 319 l~~Ri~qv~yLg~~L~~~GVPvv~P~GGHAv~iDA~~fLPhip~~qfPa~aLa~eLY~~~GIR~vEiGs~~~grdp~tg~ 398 (461)
T PRK13238 319 LAYRIAQVEYLGEGLEEAGVPVVTPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYLEAGIRAVEIGSLLLGRDPDTGE 398 (461)
T ss_pred HHHHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEHHHHCCCCCHHHCCHHHHHHHHHHHCCCCEEEECCHHCCCCCCCCC
T ss_conf 99779999999999997799705679851899746785679981448189999999997295578750012054888766
Q ss_pred ----CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf ----870399962-87899999999999999998873
Q gi|254780486|r 348 ----NTARLRISI-TLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 348 ----~~~rlRi~v-~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
.-+.+|+++ ....|.+++|..++++..+.+.-
T Consensus 399 ~~~~~~ELvRLAiPRRvYT~sH~dyva~~l~~l~~~r 435 (461)
T PRK13238 399 QLPAPAELLRLAIPRRVYTQSHMDYVAEALKWVKENR 435 (461)
T ss_pred CCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 5787600002424500035889999999999999567
No 293
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.44 E-value=2.4e-10 Score=84.61 Aligned_cols=354 Identities=13% Similarity=0.127 Sum_probs=209.4
Q ss_pred HHHHHHHHHHHHHCCCEEEECCCC-EEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 789999999999759839992897-6898034465667798899999999998637868872244368858999999998
Q gi|254780486|r 6 MSFYEERLQKIKSKGRHRQLLRRQ-DIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEA 84 (381)
Q Consensus 6 ~~~~~~~l~~~~~~g~~~~~~~~~-~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~l 84 (381)
+.--++|.+.++..|-.--..+.+ -++|+-+-+=- -+..+....++. .---+..|||-++ .||+.+
T Consensus 21 ~~treeR~~al~~AgyN~F~L~s~dV~IDlLTDSGT-----~AMSd~QwAamm-~gDEsYAGs~sf~-------~l~~~v 87 (459)
T PRK13237 21 MTTREEREQAIKEAGYNTFLLRSEDVYIDLLTDSGT-----NAMSDKQWAGMM-IGDEAYAGSRNFY-------HLEATV 87 (459)
T ss_pred CCCHHHHHHHHHHCCCCEECCCCCCEEEECEECCCC-----CCCCHHHHHHHH-HCCHHHHCCCCHH-------HHHHHH
T ss_conf 999999999999818983037656614665115884-----426799999987-3045553240189-------999999
Q ss_pred HHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHH-HHHCCC--------------CCEEECCC-CHHH
Q ss_conf 4012888516741660245655666316897100454202677526-664087--------------64030568-8147
Q gi|254780486|r 85 ADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREG-INSGKA--------------QAIAIPHN-NINS 148 (381)
Q Consensus 85 A~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g-~~ls~a--------------~~~~f~Hn-D~~~ 148 (381)
.+++|++..+-...|-.|-.-+++++.+++++|.+ +.|.---.+ +.+.|+ ...+||-| |++.
T Consensus 88 ~difg~~~viPtHQGRaAE~IL~~~l~k~G~~vp~--N~hFdTTrahie~~G~~~~dl~~~ea~d~~~~~pFKGN~Dl~k 165 (459)
T PRK13237 88 QEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYVPG--NMYFTTTRYHQELNGGIFVDIIIDEAHDAQSLHPFKGNVDLDK 165 (459)
T ss_pred HHHCCCCEEEECCCCHHHHHHHHHHHCCCCCEECC--CCCCCCHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCHHH
T ss_conf 99729952406677666899999997158989578--8686640899996598787413520258677889688779999
Q ss_pred HHHHHHHHHHCCCCCCCEEEEC-CCCCCCC---CHHHHHHHHHHHHHCCEEEEECCCCCC---CCCCCCCCEEEE-----
Q ss_conf 8997643100024786079714-6215766---134689999986313608986131122---234777640110-----
Q gi|254780486|r 149 FAENINKWRKSGGKGFPWIVVE-SIYSMDG---DKAPLDDLVKIANDYDGFIVVDEAHAT---GVCGPLGKGLTH----- 216 (381)
Q Consensus 149 Le~~l~~~~~~~~~~~~~vv~e-gv~Sm~G---~~apL~~i~~l~~~y~~~LivDEah~~---Gv~G~~G~G~~~----- 216 (381)
|++.++++.. ...++|+++ +..|..| ++++++++.+||++||..+++|-+--. -++-.+-.|+.+
T Consensus 166 Le~~i~~~g~---~~I~~v~~tiTnN~~GGQPVSm~Nir~v~~la~~~gipl~lDaaRfaENAyFIk~RE~gy~~~si~e 242 (459)
T PRK13237 166 LQKLIDEVGA---ENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKEREEGYQDKSIKE 242 (459)
T ss_pred HHHHHHHHCC---CCEEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf 9999987485---5600899998526878806468999999999998099699876678876899983442014899999
Q ss_pred ----EHHCCCCCCCCCCCCC-CCCCEEEEEECCC-CCCCCCCCCCC---CE-ECCCCCCCCHHHHHHHHHHHHHHCCCHH
Q ss_conf ----0001346521001346-5653026752451-00100001211---00-0013577502578988789886271022
Q gi|254780486|r 217 ----IIEERNNVIVMHSCSK-ALGSSGALVGSNK-IIYDYLINYAK---PF-IYTTSPSPILAVVACEALKLIKRKPALH 286 (381)
Q Consensus 217 ----~~~~~~~~iv~~TlsK-a~g~~GG~i~~~~-~ii~~l~~~~~---~~-ifst~l~P~~~aaa~aal~~l~~~~~~~ 286 (381)
.+.. -+.++-|.-| ++...||+++-+. ++.+..++..- +| .| ++|+---..|....|+-.-+++.++
T Consensus 243 I~rEmfs~--aDg~tmSaKKD~~vniGG~ia~~d~~l~~~~~~~~i~~EGf~TY-GGlagRDmeAlA~GL~E~~de~yl~ 319 (459)
T PRK13237 243 ILKEMFSY--ADGATMSGKKDCLVNIGGFLAMNDDELFQEAKELVVVYEGMPSY-GGMAGRDMEAMAIGIEESVQDDYIR 319 (459)
T ss_pred HHHHHHHH--HHEEEEEECCCCCCCCCCEEEECCHHHHHHHHHHEEECCCCCCC-CCCCHHHHHHHHCCHHHHCCHHHHH
T ss_conf 99999744--02799983202534655679857799999998551120587554-5622646999963437543679999
Q ss_pred HHHHHHHHHHHHHHHCCCCC--CCCCCEEEEEE--------CCHHHHHHHHHHHH-HCCEEEEEE------CCCCCC---
Q ss_conf 47899999999876417978--99897289995--------89799999999999-779189862------288888---
Q gi|254780486|r 287 KSLLQLINITDKIANKKIGF--SSQSHIQSIVI--------GDNKSCLNIAKNLQ-KKGFDIRAI------RPPTVP--- 346 (381)
Q Consensus 287 ~~l~~~~~~~~~~~~~~~g~--~~~s~I~~v~~--------gd~~~a~~~~~~L~-~~Gi~v~~i------~~PtVp--- 346 (381)
.+..+...+-+++...++++ +...+-+.|-. .+.-.+..++.+|. +-||...-+ +-|-..
T Consensus 320 ~Ri~qv~yl~~~L~~~GVPvv~P~GGHav~iDA~~fLPhip~~~fPa~aLa~~LY~~~GIR~~E~Gs~~~grdp~tg~~~ 399 (459)
T PRK13237 320 HRIGQVRYLGEKLLAAGVPIVEPVGGHAVFLDARRFLPHIPQDQFPAQALAAELYIDSGVRSMERGIVSAGRDPKTGENH 399 (459)
T ss_pred HHHHHHHHHHHHHHHCCCCEECCCCCEEEEEEHHHHCCCCCHHHCCHHHHHHHHHHHCCCCEEEECCHHCCCCCCCCCCC
T ss_conf 88999999999999879970368985289974677568998033929999999999719346854010116688875656
Q ss_pred -CCCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf -8870399962-878999999999999999988738
Q gi|254780486|r 347 -INTARLRISI-TLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 347 -~~~~rlRi~v-~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
..-+.+|+++ ....|.+++|..++++.++.+.-+
T Consensus 400 ~~~~ElvRLAiPRRvYT~sH~dyva~~l~~l~~~r~ 435 (459)
T PRK13237 400 YPKLELVRLTIPRRVYTYAHMDVVAESVIKLYKHRE 435 (459)
T ss_pred CCCCCEEEEECCCHHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 876333677235020358899999999999996487
No 294
>TIGR01140 CobD L-threonine-O-3-phosphate decarboxylase, putative; InterPro: IPR005860 L-threonine-O-3-phosphate decarboxylase (CobD) was shown to decarboxylate L-threonine O-3-phosphate to yield (R)-1-amino-2-propanol O-2-phosphate, which is the precursor for the linkage between the nucleotide loop and the corrin ring in the biosynthesis of cobalamin . The molecule is a dimer where each subunit consists of a large and small domain . This family contains pyridoxal phosphate-binding class II aminotransferases closely related to histidinol-phosphate aminotransferase (HisC). ; GO: 0003824 catalytic activity, 0009236 cobalamin biosynthetic process.
Probab=99.42 E-value=1.6e-11 Score=91.92 Aligned_cols=316 Identities=16% Similarity=0.225 Sum_probs=188.7
Q ss_pred CCCCEEEECCCC-CCCCCCC-CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC-EEEECCCCHH
Q ss_conf 289768980344-6566779-889999999999863786887224436885899999999840128885-1674166024
Q gi|254780486|r 26 LRRQDIWDFTSH-DYLALSS-STLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEK-MLYFGSGYAA 102 (381)
Q Consensus 26 ~~~~~~l~f~s~-dYLGl~~-~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~-al~~~sG~~A 102 (381)
++..++|||+.| |=||.-. -..-.+++.+++ ++|+ -+-|-.|-+.+|++++... .++-..|-.+
T Consensus 2 ~~~~~lLDFsAninPlgpP~S~~aa~~~aLd~~-~rYP------------D~dY~hlrqA~AdH~q~~~dwvl~gnG~~e 68 (349)
T TIGR01140 2 IDDDDLLDFSANINPLGPPASVKAALAAALDAL-ERYP------------DDDYIHLRQALADHHQVAADWVLAGNGELE 68 (349)
T ss_pred CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HCCC------------CCCHHHHHHHHHHHHCCCCCCEECCCCCHH
T ss_conf 887430324345788887602045898742787-6088------------843189999986541256012545997278
Q ss_pred H-HHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCE--EEC--C-------CCHHHHHHHHHHHHHCCCCCCCEEEEC
Q ss_conf 5-655666316897100454202677526664087640--305--6-------881478997643100024786079714
Q gi|254780486|r 103 N-MAILSTLPQATDLIVYDKLVHASIREGINSGKAQAI--AIP--H-------NNINSFAENINKWRKSGGKGFPWIVVE 170 (381)
Q Consensus 103 n-~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~--~f~--H-------nD~~~Le~~l~~~~~~~~~~~~~vv~e 170 (381)
. ..++.++..+||.++.-.=+-+-=-...+.+|+..+ ++. . .|+..+ .++.... +.-..+|.-.
T Consensus 69 ~i~la~~t~~~~Gd~~~V~~P~F~eYgR~~~~~Gae~~ti~w~~~~~~~W~~~~dPsei-A~l~A~~---s~h~~lilct 144 (349)
T TIGR01140 69 SIRLAAETLVSRGDAVLVVAPAFAEYGRELELAGAELKTIRWSLDEADGWRVLRDPSEI-ALLDAVT---SEHDLLILCT 144 (349)
T ss_pred HHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCHHHH-HHHCCCC---CCCCEEEEEC
T ss_conf 88998861478887578708870267999985698122345773168887455764566-5412688---3313531117
Q ss_pred CCCCCCCCHHH---HHHHHHHHHHCCEEEEECCCCCCCCCCC-CCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEEC
Q ss_conf 62157661346---8999998631360898613112223477-76401100001346521001346565302---67524
Q gi|254780486|r 171 SIYSMDGDKAP---LDDLVKIANDYDGFIVVDEAHATGVCGP-LGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGS 243 (381)
Q Consensus 171 gv~Sm~G~~ap---L~~i~~l~~~y~~~LivDEah~~Gv~G~-~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~ 243 (381)
.=.. +|+... |.++.+-|+.-|.-|++|||- ++++-+ +-.|+.-.+...|+++|..||.|=|+.-| ||++.
T Consensus 145 PnNP-tG~l~~r~~l~A~a~rc~~~N~~LllDEAF-~dF~pPG~E~~l~p~l~~~P~~~vlRSLTKfy~lPGLRlGylva 222 (349)
T TIGR01140 145 PNNP-TGDLLERDALRALADRCKAVNIELLLDEAF-LDFLPPGEETSLVPSLKDTPNVVVLRSLTKFYALPGLRLGYLVA 222 (349)
T ss_pred CCCC-CCCCCCCHHHHHHHHHHHHHHHHHHHHHHH-HCCCCCCCCCCCCCHHHCCCCEEEECCHHHHHCCHHHHHHHHHC
T ss_conf 6769-898622478999998888740466665565-15789864434341332689789971115540250244545551
Q ss_pred CCC-CCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHH-----HHHHHHHHHHCC-C-CCCCCCCEEEE
Q ss_conf 510-010000121100001357750257898878988627102247899-----999999876417-9-78998972899
Q gi|254780486|r 244 NKI-IYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQ-----LINITDKIANKK-I-GFSSQSHIQSI 315 (381)
Q Consensus 244 ~~~-ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~-----~~~~~~~~~~~~-~-g~~~~s~I~~v 315 (381)
..+ .+..+|..-.++ +++-+.++++..+|+ .+ +.++..++ ..++.+.+...- + .+++.++ ++
T Consensus 223 ~~Da~la~~r~~r~pW----~vnalAaaag~~al~---~s-ef~q~tw~wl~~erar~~qaL~~lP~l~v~Ps~an--fL 292 (349)
T TIGR01140 223 VDDALLARLRAARRPW----SVNALAAAAGAAALR---DS-EFRQETWRWLAEERARLRQALADLPLLDVYPSRAN--FL 292 (349)
T ss_pred CCHHHHHHHHHHCCCC----CCCHHHHHHHHHHHH---HH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC--CE
T ss_conf 6617899999742899----877689999999876---67-89999987436677899999971788755888876--11
Q ss_pred EECCHHHHHHHHHHHHHC-CEEEE-EECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 958979999999999977-91898-6228888888703999628789999999999999999
Q gi|254780486|r 316 VIGDNKSCLNIAKNLQKK-GFDIR-AIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 316 ~~gd~~~a~~~~~~L~~~-Gi~v~-~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
.+.-.....+++++|+.+ +|+++ +..||- .++...|+.|. |.+|.++++.+|.+|
T Consensus 293 Ll~~~~~~~dl~~~llt~~~IliRdc~~fpg--Lds~~~RVAvR---t~a~N~rLlaALa~v 349 (349)
T TIGR01140 293 LLKVEREDVDLQEELLTKERILIRDCLSFPG--LDSDYYRVAVR---TAAENDRLLAALADV 349 (349)
T ss_pred EEECCCCCHHHHHHHHHHCCCCHHHCCCCCC--CCCCEEEEEEC---CHHHHHHHHHHHHCC
T ss_conf 4545898688999998743410012057888--88752788852---855478999996139
No 295
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=99.39 E-value=1.3e-10 Score=86.39 Aligned_cols=163 Identities=23% Similarity=0.224 Sum_probs=119.7
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHC-CHH--HHH-HHHHCCCC
Q ss_conf 68872244368858999999998401288851674166024565566631689710045420-267--752-66640876
Q gi|254780486|r 62 IGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLV-HAS--IRE-GINSGKAQ 137 (381)
Q Consensus 62 ~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~-HaS--i~~-g~~ls~a~ 137 (381)
.|.-=||+.+ +.-..||+++|.+-|--.++-++||..|-.-+|..|+++||.|++-... -.+ +.. -.+.-+.+
T Consensus 52 ~G~iYsRi~N---PT~~vlE~RiAaLEGG~aa~a~aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~ 128 (426)
T COG2873 52 PGNIYTRIMN---PTTDVLEERIAALEGGVAALAVASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIE 128 (426)
T ss_pred CCCEEEECCC---CHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHCCCE
T ss_conf 7732353358---3089999999986145411333133589999999864588706751323375488999888864817
Q ss_pred CEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEE
Q ss_conf 40305688147899764310002478607971462157661346899999863136089861311222347776401100
Q gi|254780486|r 138 AIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHI 217 (381)
Q Consensus 138 ~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~ 217 (381)
+..+...|++.+++.+++ +++.|.+|++--=.++++|+++|.++|+++|+.|+||-.-+... ++..
T Consensus 129 v~fvd~~d~~~~~~aI~~-------nTkavf~EtigNP~~~v~Die~ia~iAh~~gvpliVDNT~atpy-------l~rP 194 (426)
T COG2873 129 VRFVDPDDPENFEAAIDE-------NTKAVFAETIGNPGLDVLDIEAIAEIAHRHGVPLIVDNTFATPY-------LCRP 194 (426)
T ss_pred EEEECCCCHHHHHHHHCC-------CCCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCE-------ECCH
T ss_conf 999279998999987382-------24068787516887663577999999987599389836777300-------4366
Q ss_pred HHCCCCCCCCCCCCCCCCC----EEEEEE
Q ss_conf 0013465210013465653----026752
Q gi|254780486|r 218 IEERNNVIVMHSCSKALGS----SGALVG 242 (381)
Q Consensus 218 ~~~~~~~iv~~TlsKa~g~----~GG~i~ 242 (381)
+ ....+||+.|++|=+|+ .||.|.
T Consensus 195 ~-~hGADIVvHS~TK~igGhGt~iGG~iV 222 (426)
T COG2873 195 I-EHGADIVVHSATKYIGGHGTAIGGVIV 222 (426)
T ss_pred H-HCCCCEEEEEECCCCCCCCCCCCEEEE
T ss_conf 5-618877998603012677654240798
No 296
>TIGR01328 met_gam_lyase methionine gamma-lyase; InterPro: IPR006237 This family of sequences is a methionine gamma-lyase subset of a family of PLP-dependent trans-sulphuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine..
Probab=99.37 E-value=7.4e-11 Score=87.83 Aligned_cols=289 Identities=18% Similarity=0.196 Sum_probs=183.6
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHH----HHHHHCCCCCEEEC
Q ss_conf 24436885899999999840128885167416602456556663168971004542026775----26664087640305
Q gi|254780486|r 67 SRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIR----EGINSGKAQAIAIP 142 (381)
Q Consensus 67 sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~----~g~~ls~a~~~~f~ 142 (381)
||+= +|.-.-||++||.+=|.|+|+-++||..|-.+.+-++.+-+|+||.|+-.-.|-+ ++..-=+.++.
T Consensus 54 sRlg---NPTv~~LE~riA~LEg~EAavAt~SGMgAi~A~l~~~lkAgDh~i~d~~lYGCTfall~~~ltkfgi~v~--- 127 (392)
T TIGR01328 54 SRLG---NPTVDLLERRIAELEGAEAAVATASGMGAIAATLLSLLKAGDHVISDETLYGCTFALLEDALTKFGIDVK--- 127 (392)
T ss_pred ECCC---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHCCEEE---
T ss_conf 5267---7137788889875420467788751289999999999852875774387420148998732677375279---
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCEEEECC-CCCCCCCHHHHHHHHHHHHHCC-EEEEECCCCCCCCCCCCCCEEEEEHHC
Q ss_conf 68814789976431000247860797146-2157661346899999863136-089861311222347776401100001
Q gi|254780486|r 143 HNNINSFAENINKWRKSGGKGFPWIVVES-IYSMDGDKAPLDDLVKIANDYD-GFIVVDEAHATGVCGPLGKGLTHIIEE 220 (381)
Q Consensus 143 HnD~~~Le~~l~~~~~~~~~~~~~vv~eg-v~Sm~G~~apL~~i~~l~~~y~-~~LivDEah~~Gv~G~~G~G~~~~~~~ 220 (381)
.-|++.-|+..+... +++.+|-+|. +... =-+.||..+++++++-+ +.+|||-..+.=.+ .... .
T Consensus 128 f~~~~~pee~~a~i~----dnT~ivYfETPaNPt-m~liD~e~v~r~A~~~gG~kVivDNTfatP~l-------t~P~-a 194 (392)
T TIGR01328 128 FVDMASPEEVKAAIK----DNTKIVYFETPANPT-MKLIDLELVVRVAHEKGGVKVIVDNTFATPYL-------TRPV-A 194 (392)
T ss_pred EECCCCHHHHHHHCC----CCCEEEEEECCCCCC-HHHHHHHHHHHHHHHCCCEEEEEECCCCCHHH-------CCHH-H
T ss_conf 831787799998448----997799986599875-25775999999997529828998566277001-------3803-6
Q ss_pred CCCCCCCCCCCCCCCCEE----EEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHH
Q ss_conf 346521001346565302----67524510010000121100001357750257898878988627102-2478999999
Q gi|254780486|r 221 RNNVIVMHSCSKALGSSG----ALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINI 295 (381)
Q Consensus 221 ~~~~iv~~TlsKa~g~~G----G~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~ 295 (381)
..-|||+.|=.|=+|+.| |.++|+++.+..+|..+-==+-..-+||..+.-.+.-|+.|.=+-.+ -+...+.+++
T Consensus 195 lG~D~VVHSATKYigGHgDvVaG~~~G~~e~~q~iR~~g~KD~tG~ViSPfdAwL~lRGLkTL~~RM~rhsenA~kvAe~ 274 (392)
T TIGR01328 195 LGVDVVVHSATKYIGGHGDVVAGVLIGDAELLQRIRLVGVKDMTGAVISPFDAWLVLRGLKTLAVRMKRHSENAEKVAEY 274 (392)
T ss_pred CCCCEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 18776894241213761221122110775667440111100056650055789999743667778887730538999998
Q ss_pred HHHH-HHCCC---CCC--------------CCCCEEEEEE-CCHHHHHHHHHHHH--HCCEEE----EEECCC------C
Q ss_conf 9987-64179---789--------------9897289995-89799999999999--779189----862288------8
Q gi|254780486|r 296 TDKI-ANKKI---GFS--------------SQSHIQSIVI-GDNKSCLNIAKNLQ--KKGFDI----RAIRPP------T 344 (381)
Q Consensus 296 ~~~~-~~~~~---g~~--------------~~s~I~~v~~-gd~~~a~~~~~~L~--~~Gi~v----~~i~~P------t 344 (381)
++.- +-... |+. +.+ .+.+.+ +......++.++|. ..-|-. .-|-.| .
T Consensus 275 Lk~HPaVe~V~YPG~~~hp~hdiaakQM~~gGg-m~~F~lKgg~a~~~k~~n~LkLIr~AVSLGdaEtLIQHPAsMTHav 353 (392)
T TIGR01328 275 LKEHPAVEKVYYPGLEEHPDHDIAAKQMKKGGG-MLAFELKGGEADAKKLLNRLKLIRLAVSLGDAETLIQHPASMTHAV 353 (392)
T ss_pred HHCCCCCCEEECCCCCCCCCCHHHHHHHHCCCC-EEEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
T ss_conf 523886021236887788874089998740487-2775432566899999875557665531277420005876466789
Q ss_pred CCC--------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 888--------87039996287899999999999999998873
Q gi|254780486|r 345 VPI--------NTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 345 Vp~--------~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
||+ .+..||+++.. ||.+.++.=|++.++.+
T Consensus 354 vp~eeR~aaGI~~gm~RlSvGl----Ed~~d~~ADl~~aL~~L 392 (392)
T TIGR01328 354 VPKEEREAAGISEGMVRLSVGL----EDVDDVLADLKQALDAL 392 (392)
T ss_pred CCHHHHHHCCCCCCCEEEECCH----HHHHHHHHHHHHHHCCC
T ss_conf 8856784447664612230045----26999999999852149
No 297
>KOG0634 consensus
Probab=99.35 E-value=1.7e-09 Score=79.28 Aligned_cols=302 Identities=15% Similarity=0.137 Sum_probs=171.5
Q ss_pred CCCCHHHHHHHHHHHHHCC--------CC-CEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEE
Q ss_conf 6885899999999840128--------88-51674166024565566631689710045420267752666408764030
Q gi|254780486|r 71 CGNYNQHLELEEEAADFFG--------FE-KMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAI 141 (381)
Q Consensus 71 ~G~~~~~~~lE~~lA~~~g--------~e-~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f 141 (381)
+|...-.-+|=..+.++.+ .+ +-++.+.-+.+-.-++.+++.++|.|+.|+..-.|-.+.++.-+++++++
T Consensus 96 Yg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL~s~~a~gv~~ipv 175 (472)
T KOG0634 96 YGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSALQSMEALGVKIIPV 175 (472)
T ss_pred CCCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEECCCCHHHHHHCCCCCCEEEEC
T ss_conf 45446848999999874623142777788438980687217899999851678826874034367887331048457741
Q ss_pred C----CCCHHHHHHHHHHHHHC---CCCCCCEEEEC-CCCCCCCCHHH---HHHHHHHHHHCCEEEEECCCCCCCCCCCC
Q ss_conf 5----68814789976431000---24786079714-62157661346---89999986313608986131122234777
Q gi|254780486|r 142 P----HNNINSFAENINKWRKS---GGKGFPWIVVE-SIYSMDGDKAP---LDDLVKIANDYDGFIVVDEAHATGVCGPL 210 (381)
Q Consensus 142 ~----HnD~~~Le~~l~~~~~~---~~~~~~~vv~e-gv~Sm~G~~ap---L~~i~~l~~~y~~~LivDEah~~Gv~G~~ 210 (381)
+ |-|++.|++.+..++.. .++.+++..+- |-.. +|..-+ =++|.+|+++|+++++-||.+.+--++..
T Consensus 176 ~md~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNP-TG~tls~errk~iy~LArKyDfLIVeDdpYy~Lq~~~y 254 (472)
T KOG0634 176 KMDQDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNP-TGNTLSLERRKKIYQLARKYDFLIVEDDPYYFLQMNTY 254 (472)
T ss_pred CCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCC-CCCCCCHHHHHHHHHHHHHCCEEEEECCCCCEEECCCC
T ss_conf 45678988799998986488543468997079967688899-88746899999999999876789992476312433666
Q ss_pred -CC---------E-------EEE--EHHCCCCCCCCCCCCCCCC--CEEEEEECCCCCCCCCCCCCCCEECCCCCCCCHH
Q ss_conf -64---------0-------110--0001346521001346565--3026752451001000012110000135775025
Q gi|254780486|r 211 -GK---------G-------LTH--IIEERNNVIVMHSCSKALG--SSGALVGSNKIIYDYLINYAKPFIYTTSPSPILA 269 (381)
Q Consensus 211 -G~---------G-------~~~--~~~~~~~~iv~~TlsKa~g--~~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~ 269 (381)
+. + +.. ..+...++|.+.||||-++ ..=||+.+++.+++.+...+.. +|..|--..
T Consensus 255 ~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKiiaPGlRlG~it~~~~~l~ril~~ae~---~t~~pSg~s 331 (472)
T KOG0634 255 NPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKIIAPGLRLGWITGNSLFLKRILDLAEV---ATSGPSGFS 331 (472)
T ss_pred CCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEECCCHHHHHCCCCEEEEEECCHHHHHHHHHHCCE---EECCCCCCC
T ss_conf 88766467552478898864477323666661786341244416763157863577788888612031---003866410
Q ss_pred HHHHHH-HHHHHHCCCHHHHHHHHH---HHHH----HHHHCCCCCC-------CCCCEEEEEEC-------CH-H-HHHH
Q ss_conf 789887-898862710224789999---9999----8764179789-------98972899958-------97-9-9999
Q gi|254780486|r 270 VVACEA-LKLIKRKPALHKSLLQLI---NITD----KIANKKIGFS-------SQSHIQSIVIG-------DN-K-SCLN 325 (381)
Q Consensus 270 aaa~aa-l~~l~~~~~~~~~l~~~~---~~~~----~~~~~~~g~~-------~~s~I~~v~~g-------d~-~-~a~~ 325 (381)
.++..+ |+.- .++...+-+.++. ..+. ..+.+.+... ...-.+-|.+. +. . ....
T Consensus 332 q~iv~a~l~~w-gqeG~~~wi~~l~~~Yt~Rrn~~l~Al~kylp~~~~~~~~P~aGmFiwv~i~~~~~~~~~~i~q~~e~ 410 (472)
T KOG0634 332 QGIVYAMLKRW-GQEGFLRWIQHLRSSYTERRNALLSALDKYLPKSVCEYHPPKAGMFIWVEIPYINFDTKKSINQIEEI 410 (472)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEEECCCCCCCCCCHHHHHHH
T ss_conf 99999999998-88889999999999998889999999997587770698668764699999266434655666799999
Q ss_pred HHHHHHHCCEEEEEEC-C---CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9999997791898622-8---888888703999628789999999999999999887
Q gi|254780486|r 326 IAKNLQKKGFDIRAIR-P---PTVPINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 326 ~~~~L~~~Gi~v~~i~-~---PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
+...+.++||.+.+-. | |-....+-.+|+++... ..|+++..++.+..+++|
T Consensus 411 i~~~~vk~gV~~v~G~~F~v~p~~s~~kiffRls~a~a-~~e~l~~g~~rf~~~ike 466 (472)
T KOG0634 411 IFIKAVKNGVKLVCGSWFMVDPESSWSKIFFRLSIAFA-EPEKLDEGIERFGSVIKE 466 (472)
T ss_pred HHHHHHHCCEEEECCCEEEECCCCCCCCCEEEEEEECC-CHHHHHHHHHHHHHHHHH
T ss_conf 99999977918933743687676577752599996208-988999999999999998
No 298
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.35 E-value=4.4e-09 Score=76.78 Aligned_cols=284 Identities=20% Similarity=0.222 Sum_probs=157.1
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH----HHHHCCC-C--CEEEECCCCHHHHHHHHHHCC-----
Q ss_conf 889999999999863786887224436885899999999----8401288-8--516741660245655666316-----
Q gi|254780486|r 45 STLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEE----AADFFGF-E--KMLYFGSGYAANMAILSTLPQ----- 112 (381)
Q Consensus 45 ~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~----lA~~~g~-e--~al~~~sG~~An~~~i~~l~~----- 112 (381)
++...+.....+. +-.....-++ .-.++|++ ++++++. + ...+++.|+.||+-++.+.-.
T Consensus 75 ~~~a~~~~~~~~~-~nl~d~~~~p-------~a~~~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~ 146 (460)
T COG0076 75 PPVAAELLVSALN-KNLGDPDESP-------AAAELEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKR 146 (460)
T ss_pred HHHHHHHHHHHHH-CCCCCCCCCC-------CHHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHH
T ss_conf 7999999999873-4799812383-------1588899999999999579976606796170799999999999998766
Q ss_pred C---------CCCCCHHHHCCHHHHHHHHHCCCCCE---EEC-C--CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCC
Q ss_conf 8---------97100454202677526664087640---305-6--8814789976431000247860797146215766
Q gi|254780486|r 113 A---------TDLIVYDKLVHASIREGINSGKAQAI---AIP-H--NNINSFAENINKWRKSGGKGFPWIVVESIYSMDG 177 (381)
Q Consensus 113 ~---------~d~ii~D~~~HaSi~~g~~ls~a~~~---~f~-H--nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G 177 (381)
. ...|++-..+|.|...++++.+-... .-+ | -|+++|++.+.+..... .+|.+=|.. ..|
T Consensus 147 ~~~~~~~~~~~P~ii~s~~aH~s~~Kaa~~lG~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g----~vV~~aGtT-~~G 221 (460)
T COG0076 147 ALAESGKPGGKPNIVCSETAHFSFEKAARYLGLGLRRVPTVPTDYRIDVDALEEAIDENTIGG----VVVGTAGTT-DTG 221 (460)
T ss_pred HHHCCCCCCCCCEEEECCCCCEEHHHHHHHHCCCCEEEEEECCCEEECHHHHHHHHHHHCCCC----EEEEECCCC-CCC
T ss_conf 442023446887499457431209999998188523787524750568999999998746476----499972688-887
Q ss_pred CHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEE-EHHCCCCCCCCCCCCCCCCC---EEEEEECCC-CCCCCCC
Q ss_conf 134689999986313608986131122234777640110-00013465210013465653---026752451-0010000
Q gi|254780486|r 178 DKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTH-IIEERNNVIVMHSCSKALGS---SGALVGSNK-IIYDYLI 252 (381)
Q Consensus 178 ~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~-~~~~~~~~iv~~TlsKa~g~---~GG~i~~~~-~ii~~l~ 252 (381)
.+=|+++|.++|++|++.+.||-|.| |.+=+.-+-... .++....+-++..+-|-+.. .|.++.-++ .+.+.+.
T Consensus 222 ~iDdi~~ia~ia~~~~i~lHVDAA~G-G~~~pf~~~~~~~~f~l~~vdSIt~d~HK~g~aP~~~G~il~rd~e~l~~~~~ 300 (460)
T COG0076 222 SIDDIEELADIAEEYGIWLHVDAAFG-GFLLPFLEPDGRWDFGLEGVDSITVDGHKYGLAPIGCGVVLFRDEEALRRILI 300 (460)
T ss_pred CCCCHHHHHHHHHHCCCCEEEECCCC-CHHHHCCCCCCHHHCCCCCCEEEEECCCCCCCCCCCCEEEEEECHHHHHHHHH
T ss_conf 77889999999997699789873440-02110247422535178882089988642778888706999968898467761
Q ss_pred CC---CCCE---ECCC--CCCCCHHHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCCC-C----CCCCCEEEEEE
Q ss_conf 12---1100---0013--57750257898878988627--10224789999999987641797-8----99897289995
Q gi|254780486|r 253 NY---AKPF---IYTT--SPSPILAVVACEALKLIKRK--PALHKSLLQLINITDKIANKKIG-F----SSQSHIQSIVI 317 (381)
Q Consensus 253 ~~---~~~~---ifst--~l~P~~~aaa~aal~~l~~~--~~~~~~l~~~~~~~~~~~~~~~g-~----~~~s~I~~v~~ 317 (381)
.. .++. .|+- +.+-..+++..+.++.+-.+ .++.++..++.+++.+... ..+ + +...+++.+-.
T Consensus 301 ~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~lG~eGy~~l~~~~~~~a~~la~~l~-~~~~~e~~~~p~l~~V~fr~ 379 (460)
T COG0076 301 FADYYLPGGGIPNFTILGSRPGRQALALYANLRRLGREGYRKLLDRTLELARYLAEELE-KLGDFELVNEPELPIVAFRL 379 (460)
T ss_pred CCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HCCCCEEECCCCCEEEEEEC
T ss_conf 23667787786663688505418999999999996788899999999999999999986-47882763388650799965
Q ss_pred CCHHH-HHHHHHHHHHCCEEEEEECCC
Q ss_conf 89799-999999999779189862288
Q gi|254780486|r 318 GDNKS-CLNIAKNLQKKGFDIRAIRPP 343 (381)
Q Consensus 318 gd~~~-a~~~~~~L~~~Gi~v~~i~~P 343 (381)
.+... ......++.++|..+..-..|
T Consensus 380 ~~~~~~~~~~~~~~~~~gw~v~~~~~~ 406 (460)
T COG0076 380 KDDEDTLADLSERLDRRGWQVPAQLLP 406 (460)
T ss_pred CCCCCCHHHHHHHHHHCCCEEECCCCC
T ss_conf 764320231478998629755201377
No 299
>PRK04311 selenocysteine synthase; Provisional
Probab=99.33 E-value=1.5e-08 Score=73.46 Aligned_cols=325 Identities=17% Similarity=0.200 Sum_probs=179.1
Q ss_pred EEEECCCCEEEECCCCCCCCCCC-CHHHHHHHHHHHHHHC-------CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCE
Q ss_conf 39992897689803446566779-8899999999998637-------868872244368858999999998401288851
Q gi|254780486|r 22 HRQLLRRQDIWDFTSHDYLALSS-STLLREKILSSLDSKI-------PIGSGGSRLLCGNYNQHLELEEEAADFFGFEKM 93 (381)
Q Consensus 22 ~~~~~~~~~~l~f~s~dYLGl~~-~p~v~~a~~~a~~~~~-------g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~a 93 (381)
.|.+++..-++ +-+| ||=+- +++..+++.+.. ..| -.|.-|+| |..+|+.|++++|.|+|
T Consensus 80 lr~VINaTGvv-lHTN--LGRapL~~~a~~~v~~~~-~~YsnLE~dL~~G~RG~R--------~~~v~~ll~~ltgaE~a 147 (465)
T PRK04311 80 LRPVINATGVV-LHTN--LGRALLSEAAIEAVTEAA-RGYSNLEYDLATGKRGSR--------DRALAALLCELTGAEDA 147 (465)
T ss_pred CEEEEECCCEE-ECCC--CCCCCCCHHHHHHHHHHH-CCCCHHHHECCCCCCCCC--------HHHHHHHHHHHHCCCEE
T ss_conf 41256342057-5466--777778899999999996-287215522013889870--------89999999985498737
Q ss_pred EEECCCCHHHHHHHHHHCCCCCCCCHH-HHCC--HH--HHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEE-
Q ss_conf 674166024565566631689710045-4202--67--75266640876403056881478997643100024786079-
Q gi|254780486|r 94 LYFGSGYAANMAILSTLPQATDLIVYD-KLVH--AS--IREGINSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWI- 167 (381)
Q Consensus 94 l~~~sG~~An~~~i~~l~~~~d~ii~D-~~~H--aS--i~~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~v- 167 (381)
+++|+...|-.-++.+|++...+|++- +++- .| |=+=++.||++.+-+---|-.++.+--+.+ .+.+.++
T Consensus 148 ~vVNNNAaAv~L~l~~la~gkEviVSRGelvEIGGsFRiPdim~~sGa~L~EVGtTNrT~l~DY~~AI----~~~Ta~ll 223 (465)
T PRK04311 148 LVVNNNAAAVLLALNALAAGKEVIVSRGELVEIGGAFRIPDVMRQAGAKLVEVGTTNRTHLRDYEDAI----NENTALLL 223 (465)
T ss_pred EEECCCHHHHHHHHHHHHCCCEEEEECCCEEEECCCCCCHHHHHHCCCEEEECCCCCCCCHHHHHHHC----CCCCEEEE
T ss_conf 99828489999999986279859996453565267656278998659888743767888879999864----95654899
Q ss_pred -EECCCCCCCCC--HHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCC-CEEEEEHH-----CCCCCCCCCCCCCCCCC-E
Q ss_conf -71462157661--346899999863136089861311222347776-40110000-----13465210013465653-0
Q gi|254780486|r 168 -VVESIYSMDGD--KAPLDDLVKIANDYDGFIVVDEAHATGVCGPLG-KGLTHIIE-----ERNNVIVMHSCSKALGS-S 237 (381)
Q Consensus 168 -v~egv~Sm~G~--~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G-~G~~~~~~-----~~~~~iv~~TlsKa~g~-~ 237 (381)
|--|=|.+.|- -++++++++|+++||..++.|-- .|.+-+.. .|+.+.-. ....++++=|=-|-||+ +
T Consensus 224 kvH~SN~~i~GFt~~v~~~eL~~l~~~~~ip~~~DlG--SG~l~~~~~~gl~~Ep~v~~~l~~GaDLVtFSGDKLLGGPQ 301 (465)
T PRK04311 224 KVHTSNYRIVGFTKEVSEAELAALGKEHGLPVVVDLG--SGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLLGGPQ 301 (465)
T ss_pred EEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECC--CCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCC
T ss_conf 9956876546746889999999999875992799888--75213653126999998899997299889985540147985
Q ss_pred EEEEECCCCCCCCCCCCC--CCEECCCCCCCCHHHHHHHHHHHHHHCC-----------------CHHHHHHHHHHHHHH
Q ss_conf 267524510010000121--1000013577502578988789886271-----------------022478999999998
Q gi|254780486|r 238 GALVGSNKIIYDYLINYA--KPFIYTTSPSPILAVVACEALKLIKRKP-----------------ALHKSLLQLINITDK 298 (381)
Q Consensus 238 GG~i~~~~~ii~~l~~~~--~~~ifst~l~P~~~aaa~aal~~l~~~~-----------------~~~~~l~~~~~~~~~ 298 (381)
.|.|+|++++|+.++++- |++ -......++.-++|+...+.+ +++++..+......+
T Consensus 302 AGIIvGkk~lI~~lkknPL~RAl----RvDKltLaaLeaTL~~Yl~~~~~~~~IP~l~mLt~~~~~L~~rA~~l~~~l~~ 377 (465)
T PRK04311 302 AGIIVGKKELIERLKKHPLKRAL----RVDKLTLAALEATLRLYLNPERLAEKIPTLRLLTRSPEELRARAERLAAALKA 377 (465)
T ss_pred CCEEECHHHHHHHHHHCCCHHHH----CCCHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 43374009999999868761423----25999999999999999592100011768998759999999999999999874
Q ss_pred HHHCCCC--------------CCC-CCCEEEEEE-CCHHHHHHHHHHHHHCC--EEEEEECCCCCCCCCCEEEEECCCCC
Q ss_conf 7641797--------------899-897289995-89799999999999779--18986228888888703999628789
Q gi|254780486|r 299 IANKKIG--------------FSS-QSHIQSIVI-GDNKSCLNIAKNLQKKG--FDIRAIRPPTVPINTARLRISITLNV 360 (381)
Q Consensus 299 ~~~~~~g--------------~~~-~s~I~~v~~-gd~~~a~~~~~~L~~~G--i~v~~i~~PtVp~~~~rlRi~v~a~~ 360 (381)
.. ..+. ++. .-|-..+.+ .+...+.++.++|+..- |..+. ....+-+-+. ..
T Consensus 378 ~~-~~~~v~i~~~~s~vGGGslP~~~lpS~~v~i~~~~~s~~~L~~~LR~~~~PII~RI--------~~d~~~LDlR-Ti 447 (465)
T PRK04311 378 AL-GEFAVSVVPSFSQVGGGSLPVDRLPSAALTLTPKGRSLEALAARLRLLPPPVIGRI--------EDGRLLLDLR-TL 447 (465)
T ss_pred HC-CCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHCCCCCEEEEE--------ECCEEEEEEC-CC
T ss_conf 25-78428999776645788787887886799985799999999999836999889999--------8897999916-38
Q ss_pred CHHHHHHHHHHHHHHHHH
Q ss_conf 999999999999999887
Q gi|254780486|r 361 DEPTIVKLFDILPQIISE 378 (381)
Q Consensus 361 t~edi~~~~~~l~~v~~E 378 (381)
.++|.+.++++|.+++.+
T Consensus 448 ~~~d~~~i~~~l~~il~~ 465 (465)
T PRK04311 448 EEEDEEALAAALLELLNK 465 (465)
T ss_pred CHHHHHHHHHHHHHHHHC
T ss_conf 978999999999999619
No 300
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.32 E-value=1.1e-10 Score=86.66 Aligned_cols=295 Identities=14% Similarity=0.194 Sum_probs=167.2
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEEC-CCCHH---HHHHHHHHC-----CCCCCCCHHHHCCHHHHHHHHHCCCCCEE
Q ss_conf 3688589999999984012888516741-66024---565566631-----68971004542026775266640876403
Q gi|254780486|r 70 LCGNYNQHLELEEEAADFFGFEKMLYFG-SGYAA---NMAILSTLP-----QATDLIVYDKLVHASIREGINSGKAQAIA 140 (381)
Q Consensus 70 ~~G~~~~~~~lE~~lA~~~g~e~al~~~-sG~~A---n~~~i~~l~-----~~~d~ii~D~~~HaSi~~g~~ls~a~~~~ 140 (381)
..|+..+..+||+.|++..|++.+-+-| ||.+. .+.+|.+.- +..+++++-..+|..=--.+.++|-+++.
T Consensus 537 ~~Gy~~~~~~l~~~L~~itG~~~vSlQPnaGaqGE~aGll~Ir~Yh~~~g~~~R~i~LiP~SAHGTNpASA~maG~kVv~ 616 (955)
T PRK05367 537 AAGYRELIADLEAWLAEITGYDAVSLQPNAGSQGEYAGLLAIRAYHESRGEGHRNICLIPSSAHGTNPASAQMAGMKVVV 616 (955)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHCCCEEEE
T ss_conf 89999999999999999768886741788650899999999999999759877867995566788886668764976899
Q ss_pred ECC-----CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCH-HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE
Q ss_conf 056-----881478997643100024786079714621576613-46899999863136089861311222347776401
Q gi|254780486|r 141 IPH-----NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDK-APLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL 214 (381)
Q Consensus 141 f~H-----nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~-apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~ 214 (381)
.+- -|++||+.++.++...- -.+.+|-. |.-|-+ ..+++++++-+++|..+++|-|.-=..+|-+-.|
T Consensus 617 v~~d~~G~iD~~dL~~k~~~~~~~l---aa~MiTyP--sT~GvFE~~I~ei~~~vH~~GGqvY~DGANmNA~vG~~~Pg- 690 (955)
T PRK05367 617 VACDENGNIDLDDLRAKAEQHADNL---AALMITYP--STHGVFEETIREICEIVHDHGGQVYLDGANMNAQVGLTRPG- 690 (955)
T ss_pred EEECCCCCCCHHHHHHHHHHHHHHH---HHHHHCCC--CCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCEECCCCHH-
T ss_conf 7308999969999999999865776---78874477--64566067799999999854998975464400302302587-
Q ss_pred EEEHHCCCCCCCCCCCCCCCCC----EE---EEEECCCCCCCCCCCCC-----CC-EECCCCCCCCHHHHHH-HH---HH
Q ss_conf 1000013465210013465653----02---67524510010000121-----10-0001357750257898-87---89
Q gi|254780486|r 215 THIIEERNNVIVMHSCSKALGS----SG---ALVGSNKIIYDYLINYA-----KP-FIYTTSPSPILAVVAC-EA---LK 277 (381)
Q Consensus 215 ~~~~~~~~~~iv~~TlsKa~g~----~G---G~i~~~~~ii~~l~~~~-----~~-~ifst~l~P~~~aaa~-aa---l~ 277 (381)
....+++--.|-|.|+. .| |-|+..+.+..+|-.+. .. .+..-+-.|.-.+.++ -+ +.
T Consensus 691 -----~~G~Dv~HlNLHKTF~iPHGGGGPG~GPi~v~~hL~pfLP~~~~~~~~~~~~~g~vsaap~Gsa~il~is~~Yi~ 765 (955)
T PRK05367 691 -----DIGADVSHLNLHKTFCIPHGGGGPGVGPIGVKAHLAPFLPGHPVVGIGGETGIGAVSAAPFGSASILPISWMYIR 765 (955)
T ss_pred -----HCCCCHHEECCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf -----647203100133221246788898853488986502238998556788867776504587775178899999999
Q ss_pred HHHHCCCHHHH---HHHHHHHHHHHHHCCCC--CCCCCCEE---EEE-EC---C--HHHHHHHHHHHHHCCEEEEEECCC
Q ss_conf 88627102247---89999999987641797--89989728---999-58---9--799999999999779189862288
Q gi|254780486|r 278 LIKRKPALHKS---LLQLINITDKIANKKIG--FSSQSHIQ---SIV-IG---D--NKSCLNIAKNLQKKGFDIRAIRPP 343 (381)
Q Consensus 278 ~l~~~~~~~~~---l~~~~~~~~~~~~~~~g--~~~~s~I~---~v~-~g---d--~~~a~~~~~~L~~~Gi~v~~i~~P 343 (381)
++ ..+.+++. ..-|++|..+....... +.+...-+ +|+ +. + .-.+.+++++|++.||...-+.||
T Consensus 766 mm-G~~GL~~at~~AiLnANYi~~rL~~~y~ily~g~~~~~aHE~ild~r~~k~~~gi~~~DiAKRL~DyGfHaPT~sfP 844 (955)
T PRK05367 766 MM-GAEGLKQATQVAILNANYIAKRLKDHYPVLYTGRNGRVAHECILDLRPLKESTGITVDDIAKRLIDYGFHAPTMSFP 844 (955)
T ss_pred HH-HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
T ss_conf 86-67789999999999999999871124866345899967778863226643530998799999986669888744666
Q ss_pred CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 8888870399962878999999999999999988738
Q gi|254780486|r 344 TVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 344 tVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
|| + .|=|-+|-.-+++++|++++++..+.+|.+
T Consensus 845 -V~-~--tlMIEPTESEsk~elDrf~~ami~Ir~Ei~ 877 (955)
T PRK05367 845 -VA-G--TLMVEPTESESKAELDRFCDAMIAIRAEID 877 (955)
T ss_pred -CC-C--CEEECCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf -78-8--436367788998999999999999999999
No 301
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.32 E-value=8.8e-11 Score=87.35 Aligned_cols=279 Identities=16% Similarity=0.162 Sum_probs=152.2
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCC--CEEEECCCCHHHHHHHHHHCC---CCCCCCHHHHCCHHHHH----HHHHCCCCCE
Q ss_conf 43688589999999984012888--516741660245655666316---89710045420267752----6664087640
Q gi|254780486|r 69 LLCGNYNQHLELEEEAADFFGFE--KMLYFGSGYAANMAILSTLPQ---ATDLIVYDKLVHASIRE----GINSGKAQAI 139 (381)
Q Consensus 69 ~~~G~~~~~~~lE~~lA~~~g~e--~al~~~sG~~An~~~i~~l~~---~~d~ii~D~~~HaSi~~----g~~ls~a~~~ 139 (381)
..-|+....-+++..++++.|.| .+-+++.+..+..++.-++.. +.+.|+..+.+|..-.. .++..+.+++
T Consensus 58 ~sQG~Lq~~~e~Qs~i~eLtGmdv~naSl~d~a~A~aEa~~ma~~~~~~~r~~vlv~~~~hp~~~~v~~t~~~~~g~~i~ 137 (398)
T cd00613 58 ISQGRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVV 137 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHHHHCCCCEEE
T ss_conf 86999999999999999986888356326876779999999999986268998997787780369999998612586589
Q ss_pred EECCC-----CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH-HHHHHHHHHHCCEEEEECCCC-CCCCCCCCCC
Q ss_conf 30568-----8147899764310002478607971462157661346-899999863136089861311-2223477764
Q gi|254780486|r 140 AIPHN-----NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP-LDDLVKIANDYDGFIVVDEAH-ATGVCGPLGK 212 (381)
Q Consensus 140 ~f~Hn-----D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap-L~~i~~l~~~y~~~LivDEah-~~Gv~G~~G~ 212 (381)
..+.+ |+++|++.+.. ....|++.-- +.-|.+-+ +++|.+++++.|+++++|-+- ++|.+
T Consensus 138 ~v~~~~~G~~d~~~l~~~~~~-------~~a~v~v~~P-n~~G~~e~~~~~i~~~~h~~gal~~~~~~~~~l~~l----- 204 (398)
T cd00613 138 EVPSDEGGTVDLEALKEEVSE-------EVAALMVQYP-NTLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGL----- 204 (398)
T ss_pred EECCCCCCCCCHHHHHHHCCC-------CEEEEEECCC-CCCEEEECCHHHHHHHHHHCCCEEEEEECCHHHHCC-----
T ss_conf 942666777465888875078-------8599995279-996278519999999998759869997440353155-----
Q ss_pred EEEEEHHCCCCCCCCCCCCC-----CCCC-EEEEEECCCCCCCCCC-----------------------------CCCCC
Q ss_conf 01100001346521001346-----5653-0267524510010000-----------------------------12110
Q gi|254780486|r 213 GLTHIIEERNNVIVMHSCSK-----ALGS-SGALVGSNKIIYDYLI-----------------------------NYAKP 257 (381)
Q Consensus 213 G~~~~~~~~~~~iv~~TlsK-----a~g~-~GG~i~~~~~ii~~l~-----------------------------~~~~~ 257 (381)
..-+...-+|+++..-| ++|+ ..||++++++++.++- .++.+
T Consensus 205 ---~~Pg~~GaDI~~g~~q~~g~P~~~GGP~~G~~a~~~~l~r~lPgrivg~t~D~~G~~~~~ltlqtreqhIrRekats 281 (398)
T cd00613 205 ---KPPGEYGADIVVGNLQKTGVPHGGGGPGAGFFAVKKELVRFLPGRLVGVTKDAEGNRAFRLALQTREQHIRREKATS 281 (398)
T ss_pred ---CCCCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCCEEE
T ss_conf ---57100478779852511466566688744326679987735899856504788887421544135433367775288
Q ss_pred EECCCCCCCCHHHHHHHHHHHHH--HCC---CHHHHHHHHHHHHHHHHHCCCCC-CCCCC-EEE--EEECC--HHHHHHH
Q ss_conf 00013577502578988789886--271---02247899999999876417978-99897-289--99589--7999999
Q gi|254780486|r 258 FIYTTSPSPILAVVACEALKLIK--RKP---ALHKSLLQLINITDKIANKKIGF-SSQSH-IQS--IVIGD--NKSCLNI 326 (381)
Q Consensus 258 ~ifst~l~P~~~aaa~aal~~l~--~~~---~~~~~l~~~~~~~~~~~~~~~g~-~~~s~-I~~--v~~gd--~~~a~~~ 326 (381)
.|+|+.. ..++.+.-.+. ... +..+....+.+|..+......+. ....+ .-- +.+.. ...+.++
T Consensus 282 nict~qa-----l~al~a~~Y~~~lG~~GL~~va~~~~~~A~Yl~~~L~~~~~~~~~~~~~f~EFvi~~~~~~~~~~~~l 356 (398)
T cd00613 282 NICTGQA-----LLALMAAMYIVYLGPEGLKEIAERAHLNANYLAKRLKEVGGVLPFNGPFFHEFVLRLPPLYGIRAEDL 356 (398)
T ss_pred CCCHHHH-----HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCHHHHHH
T ss_conf 1643278-----99999999999848863889999999999999999986389826899866699997687547689999
Q ss_pred HHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 9999977918986228888888703999628789999999999999
Q gi|254780486|r 327 AKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDIL 372 (381)
Q Consensus 327 ~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l 372 (381)
.+++.+.|+....+.+| + ...+=+++|=.+|++|||+++++|
T Consensus 357 ~k~~i~~G~~~~~~y~~-~---~~~lli~~TE~~skediD~l~~aL 398 (398)
T cd00613 357 AKALIDGGFHAPTMYLP-V---DGTLMIEPTETETKEELDALLEAL 398 (398)
T ss_pred HHHCCCCCCCCCCCCCC-C---CCEEEEEECCCCCHHHHHHHHHHC
T ss_conf 97362158286646888-8---997999805899999999999749
No 302
>TIGR01264 tyr_amTase_E tyrosine aminotransferase; InterPro: IPR005957 This entry describes tyrosine aminotransferase (2.6.1.5 from EC) as found in animals and Trypanosoma cruzi (Euglenozoa). It is the first enzyme of a pathway of tyrosine degradation via homogentisate. L-tyrosine + 2-oxoglutarate = 4-hydroxyphenylpyruvate + L-glutamate.; GO: 0004838 tyrosine transaminase activity, 0030170 pyridoxal phosphate binding, 0009072 aromatic amino acid family metabolic process.
Probab=99.32 E-value=1.3e-09 Score=80.04 Aligned_cols=320 Identities=14% Similarity=0.127 Sum_probs=189.5
Q ss_pred CCCEEEECCCCCC---CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH--HHHHHHHHHCC------------
Q ss_conf 8976898034465---667798899999999998637868872244368858999--99999840128------------
Q gi|254780486|r 27 RRQDIWDFTSHDY---LALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHL--ELEEEAADFFG------------ 89 (381)
Q Consensus 27 ~~~~~l~f~s~dY---LGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~--~lE~~lA~~~g------------ 89 (381)
+.|.+|-++-=|= =-|-..++.++|..++++.+ .++||-+.-. +.-+++|+|+.
T Consensus 30 PeK~~I~Ls~GDPt~~gnL~~~~~~~~a~~~~v~S~---------~ynGY~p~vG~~~Ar~aia~~y~~sfvhn~~~~~~ 100 (415)
T TIGR01264 30 PEKPMIKLSIGDPTVFGNLPTSEEAMQAMKESVDSG---------KYNGYAPTVGALEAREAIAEYYRNSFVHNKRPDGS 100 (415)
T ss_pred CCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCC---------CCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCC
T ss_conf 478413111578888889988889999999875256---------60677200134888899999876311002366872
Q ss_pred --CCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHH-HHHCCCCCEEECC-CCHHHHHHHHHHHHHCCCCCCC
Q ss_conf --88516741660245655666316897100454202677526-6640876403056-8814789976431000247860
Q gi|254780486|r 90 --FEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREG-INSGKAQAIAIPH-NNINSFAENINKWRKSGGKGFP 165 (381)
Q Consensus 90 --~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g-~~ls~a~~~~f~H-nD~~~Le~~l~~~~~~~~~~~~ 165 (381)
+++.+++|.|-+|-+-+|.+|+.+|+.|+.-+== .|++.- |+.-+-.++.|.= .-=+++|.-|.+.+.--.+++.
T Consensus 101 ~~a~~Vvl~SGCS~Al~~ai~a~Ad~G~nvLVP~PG-FplY~Tlc~~~~i~~~~Y~~d~~d~~w~~DL~~l~~LiDd~T~ 179 (415)
T TIGR01264 101 IEADDVVLCSGCSHALEMAIEALADAGQNVLVPRPG-FPLYETLCKALGIEVKLYNLDLPDEDWEIDLKQLESLIDDKTK 179 (415)
T ss_pred CCCCCEEECCCCHHHHHHHHHHHCCCCCEEECCCCC-CCHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHCCCCCC
T ss_conf 012764771670278999999953797806307888-7207886401476200002579873356648988631256740
Q ss_pred -EEEEC------CCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCC-CCCCCEEE-EEHHCCCCC--CCCCCCCCCC
Q ss_conf -79714------6215766134689999986313608986131122234-77764011-000013465--2100134656
Q gi|254780486|r 166 -WIVVE------SIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVC-GPLGKGLT-HIIEERNNV--IVMHSCSKAL 234 (381)
Q Consensus 166 -~vv~e------gv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~-G~~G~G~~-~~~~~~~~~--iv~~TlsKa~ 234 (381)
+||.. |||+ --=|++|+++|++|...++.||.++-.|+ |+...... ......+.+ +.+|-++|=|
T Consensus 180 ~l~vnNPSNPcGSvF~----~~Hl~~l~a~A~~~~Lpi~ADEIY~~~VF~GkDPnatF~~lA~L~s~VP~~~cgG~AKr~ 255 (415)
T TIGR01264 180 ALIVNNPSNPCGSVFR----REHLEELLALAERLKLPIIADEIYGDMVFKGKDPNATFTPLASLSSKVPILSCGGLAKRW 255 (415)
T ss_pred EEEEECCCCCCCCCCC----HHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEECCCCCCC
T ss_conf 7888375778898878----788999999987538723664202565138867864220202377998868707632002
Q ss_pred CCEE---EEEEC-C------CCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCC-----CHHHHHHHHHHHHHHH
Q ss_conf 5302---67524-5------100100001211000013577502578988789886271-----0224789999999987
Q gi|254780486|r 235 GSSG---ALVGS-N------KIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKP-----ALHKSLLQLINITDKI 299 (381)
Q Consensus 235 g~~G---G~i~~-~------~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~-----~~~~~l~~~~~~~~~~ 299 (381)
=.-| |+++- + .++++=|++-+.--+ +++. .+.+|+. ++|.+.| ..+..+..++.+..+.
T Consensus 256 lVPGWRLGWli~hd~~~~~~~e~~~GL~~ls~~i~---Gpnt-lvQGAl~--~iL~~TPq~Yf~~~~~~l~~nA~~~y~~ 329 (415)
T TIGR01264 256 LVPGWRLGWLIIHDRKGVLRDEVKDGLKKLSQRIL---GPNT-LVQGALP--EILLKTPQEYFDGTVSVLESNAMLVYEI 329 (415)
T ss_pred CCCCCCCCCEEEECCCCCCCHHHHHHHHHHHCHHC---CCCH-HHHHHHH--HHHHHCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 24761102478887888650268899999723004---6201-1442179--8864065567789999987408999988
Q ss_pred HHCCCCCCC---CCC---EEEEE---ECCHHHHHHHHHHHH-HCCEEE---EEECCCCCCCCCCEEEEECCCCCCHHHHH
Q ss_conf 641797899---897---28999---589799999999999-779189---86228888888703999628789999999
Q gi|254780486|r 300 ANKKIGFSS---QSH---IQSIV---IGDNKSCLNIAKNLQ-KKGFDI---RAIRPPTVPINTARLRISITLNVDEPTIV 366 (381)
Q Consensus 300 ~~~~~g~~~---~s~---I~~v~---~gd~~~a~~~~~~L~-~~Gi~v---~~i~~PtVp~~~~rlRi~v~a~~t~edi~ 366 (381)
...-.|+.. ... .+-|. ++|-+.-.+|.++|. |+.|++ ++|.|| +.+|+++|. ..++++
T Consensus 330 La~v~Gl~pv~P~GaMY~m~~i~~e~F~e~k~Dv~F~~~L~~E~sV~cLPG~~F~~P------Gf~Rvv~T~--P~~~~~ 401 (415)
T TIGR01264 330 LAEVPGLRPVMPKGAMYMMVGIELEKFPEFKSDVEFVEKLVEEESVFCLPGSCFEYP------GFFRVVLTV--PSSMME 401 (415)
T ss_pred HHCCCCCEEECCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHCCCEECCHHHHCCC------CCEEEEEEC--CHHHHH
T ss_conf 510688611148875587560020017772411799999851146304641644589------958999707--806789
Q ss_pred HHHHHHHH
Q ss_conf 99999999
Q gi|254780486|r 367 KLFDILPQ 374 (381)
Q Consensus 367 ~~~~~l~~ 374 (381)
+++..|++
T Consensus 402 EA~~RI~e 409 (415)
T TIGR01264 402 EACSRIKE 409 (415)
T ss_pred HHHHHHHH
T ss_conf 99999999
No 303
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.29 E-value=4.6e-10 Score=82.86 Aligned_cols=294 Identities=14% Similarity=0.156 Sum_probs=165.7
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEEC-CCCHHH---HHHHHHHC-----CCCCCCCHHHHCCHHHHHHHHHCCCCCEE
Q ss_conf 3688589999999984012888516741-660245---65566631-----68971004542026775266640876403
Q gi|254780486|r 70 LCGNYNQHLELEEEAADFFGFEKMLYFG-SGYAAN---MAILSTLP-----QATDLIVYDKLVHASIREGINSGKAQAIA 140 (381)
Q Consensus 70 ~~G~~~~~~~lE~~lA~~~g~e~al~~~-sG~~An---~~~i~~l~-----~~~d~ii~D~~~HaSi~~g~~ls~a~~~~ 140 (381)
..|+..+..+||+-|++..|++.+-+-| ||.+.- +-+|.++- +..+++++-..+|..=--.+.++|-+++.
T Consensus 538 ~~Gy~~l~~~L~~~L~~iTG~~~vslQPnaGaqGE~aGl~~ir~yh~~~g~~~R~icLIP~SAHGTNPASA~maG~~Vv~ 617 (954)
T PRK12566 538 AEGYKAMIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHESRGQSQRDICLIPASAHGTNPASAQMAGMRVVI 617 (954)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHCCCEEEE
T ss_conf 99999999999999998668560425778775106899999999999749988837996789888897789766966899
Q ss_pred ECC-----CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCH-HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEE
Q ss_conf 056-----881478997643100024786079714621576613-46899999863136089861311222347776401
Q gi|254780486|r 141 IPH-----NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDK-APLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGL 214 (381)
Q Consensus 141 f~H-----nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~-apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~ 214 (381)
.+- -|++||++++.++...-. .+-+|- -|.-|-+ ..+++|+++-+++|..+++|-|.==..+|-.--|
T Consensus 618 v~~~~~G~iD~~dL~~k~~~~~~~la---a~MiTy--PsT~GvfE~~i~ei~~~vH~~GGqvY~DGANmNA~vG~~~Pg- 691 (954)
T PRK12566 618 VECDNDGNVDLDDLKAKAAEAGDRLS---CLMITY--PSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPA- 691 (954)
T ss_pred EECCCCCCCCHHHHHHHHHHHHHHHH---HHHCCC--CCCCCCHHHHHHHHHHHHHHHCCEEEECCCCHHHHHCCCCCC-
T ss_conf 60189998489999999997266544---343006--764512255599999999970988985463223241445720-
Q ss_pred EEEHHCCCCCCCCCCCCCCCCC----EE---EEEECCCCCCCCCCCC-----CCC--EECCCCCCCCHHHHHH-HH---H
Q ss_conf 1000013465210013465653----02---6752451001000012-----110--0001357750257898-87---8
Q gi|254780486|r 215 THIIEERNNVIVMHSCSKALGS----SG---ALVGSNKIIYDYLINY-----AKP--FIYTTSPSPILAVVAC-EA---L 276 (381)
Q Consensus 215 ~~~~~~~~~~iv~~TlsKa~g~----~G---G~i~~~~~ii~~l~~~-----~~~--~ifst~l~P~~~aaa~-aa---l 276 (381)
....+++--.|-|.|+. .| |-|+..+.+..+|-.+ ..+ ....-+-.|.-.+.++ -+ +
T Consensus 692 -----~~G~Dv~HlNLHKTF~iPHGGGGPG~GPi~v~~hL~pfLP~~~~~~~~g~~~~~~~vs~a~~Gsa~il~is~~Yi 766 (954)
T PRK12566 692 -----DIGADVSHMNLHKTFCIPHGGGGPGMGPIGVRAHLAPFVANHPVVPVPGPDPNNGAVSAAPWGSASILPISWMYI 766 (954)
T ss_pred -----CCCCCCEEEECHHCCCCCCCCCCCCCCCEEEHHHCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHH
T ss_conf -----036760232002203688788889877666642316758998634689988776625524778479999999999
Q ss_pred HHHHHCCCHHHHH---HHHHHHHHHHHHCCCCC--CCCCCEE---EEE-EC-----CHHHHHHHHHHHHHCCEEEEEECC
Q ss_conf 9886271022478---99999999876417978--9989728---999-58-----979999999999977918986228
Q gi|254780486|r 277 KLIKRKPALHKSL---LQLINITDKIANKKIGF--SSQSHIQ---SIV-IG-----DNKSCLNIAKNLQKKGFDIRAIRP 342 (381)
Q Consensus 277 ~~l~~~~~~~~~l---~~~~~~~~~~~~~~~g~--~~~s~I~---~v~-~g-----d~~~a~~~~~~L~~~Gi~v~~i~~ 342 (381)
.++- . ++++.- .-|++|..+.......+ .+....+ +|+ +. ..-.+.+++++|++.||...-+.|
T Consensus 767 ~mmG-~-~L~~at~~AiLnANY~~~rL~~~y~ily~g~~g~~aHE~ild~r~~k~~~gi~~~DiAKrL~DyGfHaPTmsf 844 (954)
T PRK12566 767 AMMG-P-QLADASEVAILSANYLANQLGGAFPVLYRGRNERVAHECILDLRPLKAQTGISEEDVAKRLMDYGFHAPTMSF 844 (954)
T ss_pred HHHC-H-HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEEECCHHHHHHCCCCHHHHHHHHHCCCCCCCCCCC
T ss_conf 9867-7-7999999999999999997304486551699998777898503553454299818998998657998983262
Q ss_pred CCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 88888870399962878999999999999999988738
Q gi|254780486|r 343 PTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 343 PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
| |+ ++ |=|-+|-.-+++++|+|++++..+..|.+
T Consensus 845 P-V~-gt--lMiEPTESEsk~elDrF~dami~Ir~Ei~ 878 (954)
T PRK12566 845 P-VP-GT--LMVEPTESESKAELDRFVEAMLSIRAEIG 878 (954)
T ss_pred C-CC-CC--EEECCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 0-68-85--56068888998999999999999999999
No 304
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase; InterPro: IPR012703 Phosphonates are a class of organophosphorus compounds, characterised by a stable C-P bond, which are found in a variety of biologically produced molecules including antiobiotics, lipids, proteins and polysaccharides . The functions of these molecules include phosphorus storage, cell communication, host recognition and chemical warfare. 2-Aminoethylphosphonate (AEP), the most common naturally occurring phosphonate, is an important precursor used in the biosynthesis of phosphonolipids, phosphonoproteins, and phosphonoglycans. This entry represents 2-aminoethylphosphonate-pyruvate transaminase (AEPT)(2.6.1.37 from EC) which catalyses the interconversion of AEP and phosphonoacetaldehyde (P-Ald), coupled with the interconversion of pryuvate and L-alanine. In some bacterial species this is the first step in an AEP degradation pathway which allows them to utilise this compound as a source of carbon, nitrogen and phosphorus. Phosphonoacetaldeyhde hydrolase, often encoded by an adjacent gene, then converts P-Ald to acetaldehyde and phosphate.Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lyase complex as found in Escherichia coli. The crystal structure of AEPT from Salmonella typhimurium has been studied to 2.2 A resolution . The protein is a homodimer where each subunit is composed of two domains, large and small. The large domain forms an alpha-beta complex characteristic of the aspartate transaminase family, while the small domain is comosed of highly twisted beta strands. The active site contains a pyridoxal 5'-phosphate cofactor and is found at the domain interface, being composed of residues from both subunits..
Probab=99.26 E-value=6.8e-09 Score=75.59 Aligned_cols=302 Identities=16% Similarity=0.176 Sum_probs=185.3
Q ss_pred CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH-HHHHHHHHHHHHCCCC-----CEEEECCCCHHHHHHHHHHCC-CC
Q ss_conf 7798899999999998637868872244368858-9999999984012888-----516741660245655666316-89
Q gi|254780486|r 42 LSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYN-QHLELEEEAADFFGFE-----KMLYFGSGYAANMAILSTLPQ-AT 114 (381)
Q Consensus 42 l~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~-~~~~lE~~lA~~~g~e-----~al~~~sG~~An~~~i~~l~~-~~ 114 (381)
|++...+++|. ...|++ +=+-+.. +-+..-.+|-++.+++ ..++-.||.-+..++|.++.. +.
T Consensus 12 LtTs~~vk~aM----l~D~Ct------WD~dYn~~~~~~ir~~L~~la~~~~~~YT~VllQGSGtf~VEA~iGs~~pr~~ 81 (366)
T TIGR02326 12 LTTSKTVKEAM----LVDWCT------WDSDYNEDVVESIRQKLLKLATAEEEKYTTVLLQGSGTFAVEAVIGSAVPRKD 81 (366)
T ss_pred CCHHHHHHHHH----HCCCCC------CCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHCCCCCCC
T ss_conf 63006888866----210458------71553136799999999998606898546786127512555665411247889
Q ss_pred CC-CCHHHHCCHHHHHHHHHCC------CCCEEEC-----CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHH
Q ss_conf 71-0045420267752666408------7640305-----6881478997643100024786079714621576613468
Q gi|254780486|r 115 DL-IVYDKLVHASIREGINSGK------AQAIAIP-----HNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPL 182 (381)
Q Consensus 115 d~-ii~D~~~HaSi~~g~~ls~------a~~~~f~-----HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL 182 (381)
+- +|++--+ -|.|+++ ...+.+. .-++.+.|+.|...+.... -.+|=.|. .+|-+-|+
T Consensus 82 ~klLv~~NGA-----YG~R~~~ia~~l~i~~~~~~~~E~~~~~~~~ve~~L~~dp~ItH--~A~vHcET---tTGiLNPi 151 (366)
T TIGR02326 82 GKLLVVINGA-----YGKRIAQIAEYLQIPHHVVETEENEPTNVVEVEAILAADPAITH--VALVHCET---TTGILNPI 151 (366)
T ss_pred CEEEEEECCC-----HHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHCCCCCEE--EEEEECCC---CCCCCCHH
T ss_conf 7389971785-----34789999998478616751587777788999999851897127--88983675---26621128
Q ss_pred HHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCC-CCEE-EEEECCCCCCC-----------
Q ss_conf 9999986313608986131122234777640110000134652100134656-5302-67524510010-----------
Q gi|254780486|r 183 DDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKAL-GSSG-ALVGSNKIIYD----------- 249 (381)
Q Consensus 183 ~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~-g~~G-G~i~~~~~ii~----------- 249 (381)
.++..+.++||-.+|||-==||| |+.=-....+.|.++.+=.|=+ |.-| |||.+...-.+
T Consensus 152 ~~~~~~~~~hGk~~ivDAMSSfG-------gi~idi~~l~~D~LIssanKCi~GVPGfgFviA~~~~L~~~~g~arSLsL 224 (366)
T TIGR02326 152 EAVAKVAKRHGKVTIVDAMSSFG-------GIPIDIAELDIDYLISSANKCIQGVPGFGFVIAKQAELEKCAGNARSLSL 224 (366)
T ss_pred HHHHHHHHHCCCEEEEECCCCCC-------CCHHHHHHHCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHH
T ss_conf 99999998559779985341137-------60011643256763523478133768436677689999862043210235
Q ss_pred -------CCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHHHHHHCCCCCC------CCCCEE
Q ss_conf -------0001211000013577502578988789886271---022478999999998764179789------989728
Q gi|254780486|r 250 -------YLINYAKPFIYTTSPSPILAVVACEALKLIKRKP---ALHKSLLQLINITDKIANKKIGFS------SQSHIQ 313 (381)
Q Consensus 250 -------~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~---~~~~~l~~~~~~~~~~~~~~~g~~------~~s~I~ 313 (381)
++++..+-+.|| .|..++.|-..||.-++++- .|++|-+.|.+.+-. ....+||. -++||+
T Consensus 225 DLydQw~~M~~~~GkWRFT--sPTHvV~Af~qAL~el~~EGGv~aR~~RY~~nq~~L~~-~m~~LGF~~ll~~~~~sPII 301 (366)
T TIGR02326 225 DLYDQWECMEKQHGKWRFT--SPTHVVHAFAQALLELEKEGGVEARYQRYQSNQKLLVA-GMRALGFEPLLDDELQSPII 301 (366)
T ss_pred HHHHHHHHHHCCCCCEEEC--CCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH-HHHHCCCCCCCCHHHCCCEE
T ss_conf 4899999964489962217--72689999999999998458974578999999999999-99861551147543458868
Q ss_pred EEEE-CC-H-HHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEE-ECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9995-89-7-9999999999977918986228888888703999-628789999999999999999887
Q gi|254780486|r 314 SIVI-GD-N-KSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRI-SITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 314 ~v~~-gd-~-~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi-~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
.=+. ++ + -+=.+++++|+++||.+.|-.= -+.+.+|| ++. ....+||++++++|.+.+..
T Consensus 302 tsF~~P~~~~y~F~~fY~~lk~~GFviYPGKv----s~~~~FRiG~IG-~V~~~di~~l~~~I~~~~~~ 365 (366)
T TIGR02326 302 TSFYSPEDPDYRFADFYQRLKEQGFVIYPGKV----SQVDTFRIGNIG-DVDAADIERLVTAIGKALYL 365 (366)
T ss_pred EEEECCCCCCCHHHHHHHHHHHCCCEECCCCC----CCCCCEECCCCC-CCCHHHHHHHHHHHHHHHHC
T ss_conf 98507788971389999999767817627610----456621116767-63889999999999987504
No 305
>KOG2862 consensus
Probab=99.23 E-value=1.3e-08 Score=73.85 Aligned_cols=286 Identities=16% Similarity=0.183 Sum_probs=164.2
Q ss_pred HHHHHHHHHHHHHCCCCC--EEEEC-CCCHHHHHHHHHHCCCCCCCCHHHHCCHHHH--HHHHHCCCCCEEE-----CCC
Q ss_conf 899999999840128885--16741-6602456556663168971004542026775--2666408764030-----568
Q gi|254780486|r 75 NQHLELEEEAADFFGFEK--MLYFG-SGYAANMAILSTLPQATDLIVYDKLVHASIR--EGINSGKAQAIAI-----PHN 144 (381)
Q Consensus 75 ~~~~~lE~~lA~~~g~e~--al~~~-sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~--~g~~ls~a~~~~f-----~Hn 144 (381)
.+.+++-+-+-..|+... .++++ ||..+-.+++.-+..|+|.|++-..--+|.+ |=++--++++... .|-
T Consensus 50 qIm~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~ra~D~~~r~ga~V~~v~~~~G~~~ 129 (385)
T KOG2862 50 QIMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQRAADCARRYGAEVDVVEADIGQAV 129 (385)
T ss_pred HHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEEEEECHHHHHHHHHHHHHCCEEEEEECCCCCCC
T ss_conf 99999998789984047896289836984168998875257897499997233777889999860865558715855675
Q ss_pred CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH-HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCC
Q ss_conf 8147899764310002478607971462157661346-899999863136089861311222347776401100001346
Q gi|254780486|r 145 NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP-LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNN 223 (381)
Q Consensus 145 D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap-L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~ 223 (381)
.++.+++.|.+++.. .|++--.-|-+|-.-| +..+-+||++|+++|+||-+-|+| |..-..+.-..
T Consensus 130 ~le~i~~~lsqh~p~------~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlg-------gt~F~mDewgV 196 (385)
T KOG2862 130 PLEEITEKLSQHKPK------AVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLG-------GTEFEMDEWGV 196 (385)
T ss_pred CHHHHHHHHHHCCCC------EEEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEECHHHCC-------CCCCEEHHHCC
T ss_conf 499999998715874------59998347641111557888878740678189972022147-------86411211065
Q ss_pred C-CCCCCCCCCCCC-EE-EEEECCCCCCCCCCCC-CCC--E------------------ECCCCCCCCHHHHHHHHHHHH
Q ss_conf 5-210013465653-02-6752451001000012-110--0------------------001357750257898878988
Q gi|254780486|r 224 V-IVMHSCSKALGS-SG-ALVGSNKIIYDYLINY-AKP--F------------------IYTTSPSPILAVVACEALKLI 279 (381)
Q Consensus 224 ~-iv~~TlsKa~g~-~G-G~i~~~~~ii~~l~~~-~~~--~------------------ifst~l~P~~~aaa~aal~~l 279 (381)
+ ..++ =-||+|+ .| +.|+.|+...+.++++ .++ | +|--..|-....+..+||.++
T Consensus 197 Dvaytg-SQKaL~aP~GLsiisfS~ka~~~~~~rK~~~~~~yFd~~~~~~~wgc~~e~~~yhhT~pv~lly~Lr~AL~~I 275 (385)
T KOG2862 197 DVAYTG-SQKALGAPAGLSIISFSDKALEAIRDRKTKPVSFYFDILRLGNFWGCDGEPRAYHHTPPVQLLYSLRAALALI 275 (385)
T ss_pred CEEEEC-CHHHCCCCCCCCEEECCHHHHHHHHHCCCCCEEEEEEHHHHCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 078842-4343079998560323888999986145775489986776103205588635111688489999999999999
Q ss_pred HHC--CCHHHHHHHHHHHHHHHHHCCCCCC----C----CCCEEEEEECCHHHHHHHHHHHHHC-CEEEEEECCCCCCCC
Q ss_conf 627--1022478999999998764179789----9----8972899958979999999999977-918986228888888
Q gi|254780486|r 280 KRK--PALHKSLLQLINITDKIANKKIGFS----S----QSHIQSIVIGDNKSCLNIAKNLQKK-GFDIRAIRPPTVPIN 348 (381)
Q Consensus 280 ~~~--~~~~~~l~~~~~~~~~~~~~~~g~~----~----~s~I~~v~~gd~~~a~~~~~~L~~~-Gi~v~~i~~PtVp~~ 348 (381)
-++ +..-++-+++.+++ ++....+|+. . .-.+..|.++-..+-.++..+++.+ ++-+...--|++++
T Consensus 276 ~eeGL~~~~~rH~e~s~~l-~~~l~~~GLq~fv~~e~~rlptvttv~vp~gvDw~dVv~~~~~~~~vei~gglg~~~gK- 353 (385)
T KOG2862 276 AEEGLENSWRRHREMSKWL-KLSLEALGLQLFVVDEELRLPTVTTVKVPYGVDWKDVVAYAMSHYVVEIGGGLGPTVGK- 353 (385)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHHHHCCCCEECCHHHCCCCCEEEECCCCCCHHHHHHHHHHHCCEEECCCCCCCCCC-
T ss_conf 9987899999999999999-99999848610213764526750256547778879999999871677861466777562-
Q ss_pred CCEEEEECC-CCCCHHHHHHHHHHHHHHHHH
Q ss_conf 703999628-789999999999999999887
Q gi|254780486|r 349 TARLRISIT-LNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 349 ~~rlRi~v~-a~~t~edi~~~~~~l~~v~~E 378 (381)
.+||-+. -.-+-|-|++.++.|...+.+
T Consensus 354 --v~RIGl~gcna~~e~i~~v~~ll~~alq~ 382 (385)
T KOG2862 354 --VFRIGLLGCNANVEYIDNVVELLKLALQR 382 (385)
T ss_pred --EEEEEEEECCCCCHHHHHHHHHHHHHHHH
T ss_conf --89998751157728999999999999864
No 306
>KOG0259 consensus
Probab=99.23 E-value=3e-08 Score=71.53 Aligned_cols=314 Identities=13% Similarity=0.150 Sum_probs=172.9
Q ss_pred CEEEECCCCC---CCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH--------CCCCCEEEEC
Q ss_conf 7689803446---5667798899999999998637868872244368858999999998401--------2888516741
Q gi|254780486|r 29 QDIWDFTSHD---YLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADF--------FGFEKMLYFG 97 (381)
Q Consensus 29 ~~~l~f~s~d---YLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~--------~g~e~al~~~ 97 (381)
|.+|-++.-| |=.|-+.++..+|+.+++.. |.+.+=+.- .|-. ..-+++|++ +-.++.++++
T Consensus 61 k~iipl~~GDPsv~~~~~ts~~a~~Av~~al~S--gk~N~Yaps-~G~~----~AR~AVAeYl~~~l~~kl~a~DV~lts 133 (447)
T KOG0259 61 KPILPLGHGDPSVYPCFRTSQEAEQAVVDALRS--GKGNGYAPS-VGIL----PARRAVAEYLNRDLPNKLTADDVVLTS 133 (447)
T ss_pred CEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHC--CCCCCCCCC-CCCH----HHHHHHHHHHHCCCCCCCCCCCEEEEC
T ss_conf 503137889987666666888999999999963--887776876-5648----899999998631898756747669955
Q ss_pred CCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHH-HHHCCCCCEEEC---CC----CHHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 660245655666316897100454202677526-664087640305---68----8147899764310002478607971
Q gi|254780486|r 98 SGYAANMAILSTLPQATDLIVYDKLVHASIREG-INSGKAQAIAIP---HN----NINSFAENINKWRKSGGKGFPWIVV 169 (381)
Q Consensus 98 sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g-~~ls~a~~~~f~---Hn----D~~~Le~~l~~~~~~~~~~~~~vv~ 169 (381)
.+-+|-.-+|.+|++|+--|+.-+-- .++++. +.-++-.++.|. -+ |++.+|.+.++- ...+||.
T Consensus 134 GC~qAIe~~i~~LA~p~aNILlPrPG-fp~Y~~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DEN------T~Aivvi 206 (447)
T KOG0259 134 GCSQAIELAISSLANPGANILLPRPG-FPLYDTRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADEN------TVAIVVI 206 (447)
T ss_pred CCHHHHHHHHHHHCCCCCCEECCCCC-CCHHHHHHHHCCCEEEEECCCCCCCCEECHHHHHHHHCCC------EEEEEEE
T ss_conf 63699999999743899866547999-8468876632584367632567656153168899764467------0699996
Q ss_pred C------CCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EE
Q ss_conf 4------62157661346899999863136089861311222347776401100001346521001346565302---67
Q gi|254780486|r 170 E------SIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---AL 240 (381)
Q Consensus 170 e------gv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~ 240 (381)
. +||| -.-|++|.++|++++.++|-||+++--++|..--=-...+...--+|..|++||.+=.-| |+
T Consensus 207 NP~NPcGnVys----~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VPGWRlGW 282 (447)
T KOG0259 207 NPNNPCGNVYS----EDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVPGWRLGW 282 (447)
T ss_pred CCCCCCCCCCC----HHHHHHHHHHHHHHCCEEEEHHHCCEEECCCCCCCCHHHCCCCCCEEEECCCCCCCCCCCCEEEE
T ss_conf 79999865151----99999999999984976976111231331799730013305657368615423564047730346
Q ss_pred EECC--------CCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCC-----HHHHHHHHHHHHHHHHHCCCCCC
Q ss_conf 5245--------1001000012110000135775025789887898862710-----22478999999998764179789
Q gi|254780486|r 241 VGSN--------KIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPA-----LHKSLLQLINITDKIANKKIGFS 307 (381)
Q Consensus 241 i~~~--------~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~-----~~~~l~~~~~~~~~~~~~~~g~~ 307 (381)
++-. ..+++.+++.. --+..|+....+|+- ++|++.|+ ...-++.++.+-.......-++.
T Consensus 283 i~~hD~~gvf~~~~~~q~~~~~~----~~~~~p~TiiQ~AlP--~IL~kTp~efF~k~~~~lk~na~l~y~~Lk~IP~l~ 356 (447)
T KOG0259 283 IALHDPRGVFRDTKVVQGIKNFL----DIIPGPATIIQGALP--DILEKTPEEFFDKKLSFLKSNADLCYSRLKDIPCLT 356 (447)
T ss_pred EEEECCCCCCCCHHHHHHHHHHH----HCCCCCCHHHHHHHH--HHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
T ss_conf 89756665424418999999998----545995085987758--898748399999999998762799999984598766
Q ss_pred ----CCCCEEEEEEC-------CHHHHHHHHHHHH-HCCEEEEE---ECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf ----98972899958-------9799999999999-77918986---228888888703999628789999999999999
Q gi|254780486|r 308 ----SQSHIQSIVIG-------DNKSCLNIAKNLQ-KKGFDIRA---IRPPTVPINTARLRISITLNVDEPTIVKLFDIL 372 (381)
Q Consensus 308 ----~~s~I~~v~~g-------d~~~a~~~~~~L~-~~Gi~v~~---i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l 372 (381)
.++. ..++++ +-+.-..++++|- |+.+++-| +.+| .-+|++++. ..+.++.+++.|
T Consensus 357 cp~kPeg~-mylmv~l~~s~~~~~~dD~dFc~kL~~Eesv~~LPG~af~~~------nw~Ri~i~~--~~~~leea~~Ri 427 (447)
T KOG0259 357 CPVKPEGC-MYLMVKLNLSLFPDIEDDVDFCQKLAREESVICLPGQAFGLK------NWLRIVITV--EEEMLEEAFSRI 427 (447)
T ss_pred CCCCCCCC-EEEEECCCHHHHCCCCCCHHHHHHHHHHCCEEEECCCCCCCC------CEEEEEECC--CHHHHHHHHHHH
T ss_conf 67588751-589852666540022450899999863142687251203678------848999705--737899999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780486|r 373 PQI 375 (381)
Q Consensus 373 ~~v 375 (381)
++-
T Consensus 428 k~F 430 (447)
T KOG0259 428 KEF 430 (447)
T ss_pred HHH
T ss_conf 999
No 307
>KOG0256 consensus
Probab=99.21 E-value=1.3e-08 Score=73.89 Aligned_cols=284 Identities=17% Similarity=0.190 Sum_probs=165.0
Q ss_pred HHHHHHHHHCC----------CCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHC------CHHHHHHHHHCCCCCEEEC
Q ss_conf 99999840128----------8851674166024565566631689710045420------2677526664087640305
Q gi|254780486|r 79 ELEEEAADFFG----------FEKMLYFGSGYAANMAILSTLPQATDLIVYDKLV------HASIREGINSGKAQAIAIP 142 (381)
Q Consensus 79 ~lE~~lA~~~g----------~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~------HaSi~~g~~ls~a~~~~f~ 142 (381)
.+-+++|+|+. -+...+.+.++.||..+...|+.|||..+.-.-- +.+.+.|+++-. +.-+.
T Consensus 125 ~frqa~A~Fm~~~r~~~v~fdP~r~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfdrdl~~rTgveivp--v~c~S 202 (471)
T KOG0256 125 SFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFDRDLRWRTGVEIVP--VHCSS 202 (471)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCEEECCCEEEE--EEEEC
T ss_conf 8999999999998489874376566885575316677787625898510356899876322014203836999--98406
Q ss_pred CC----CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH---HHHHHHHHHHCCEEEEECCCCCCCCCCCCC-CEE
Q ss_conf 68----8147899764310002478607971462157661346---899999863136089861311222347776-401
Q gi|254780486|r 143 HN----NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP---LDDLVKIANDYDGFIVVDEAHATGVCGPLG-KGL 214 (381)
Q Consensus 143 Hn----D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap---L~~i~~l~~~y~~~LivDEah~~Gv~G~~G-~G~ 214 (381)
-| +.+.||..+++.++..-+.+.+|++..-... |++-+ |..+++.+.+++..+|+||.++-.|+++.+ +.+
T Consensus 203 s~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPL-G~~~~~e~L~~ll~Fa~~kniHvI~DEIya~sVF~~~~F~Sv 281 (471)
T KOG0256 203 SNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPL-GTTLSPEELISLLNFASRKNIHVISDEIYAGSVFDKSEFRSV 281 (471)
T ss_pred CCCCCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCC-CCCCCHHHHHHHHHHHHHCCEEEEEEHHHHHCCCCCCCCEEH
T ss_conf 7884122999999999999818952489982799977-774699999999998864562798603210020366671378
Q ss_pred EEEHH----CCCCCCCCCCCCCCCCCEE---EEEEC-CCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHC----
Q ss_conf 10000----1346521001346565302---67524-510010000121100001357750257898878988627----
Q gi|254780486|r 215 THIIE----ERNNVIVMHSCSKALGSSG---ALVGS-NKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRK---- 282 (381)
Q Consensus 215 ~~~~~----~~~~~iv~~TlsKa~g~~G---G~i~~-~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~---- 282 (381)
.+... ..+.+-++=++||-||..| |.|-+ +..++...+.. ..| ...|+. +.-.+++ ++.++
T Consensus 282 ~ev~~~~~~~~~rvHivyslSKD~GlpGfRvGviYs~ne~VvsaA~km-ssf---~~vSs~-tQ~~la~--LLSD~~f~~ 354 (471)
T KOG0256 282 LEVRKDPHLDPDRVHIVYSLSKDFGLPGFRVGVIYSNNEDVVSAATKM-SSF---GLVSSQ-TQYLLAS--LLSDEEFTR 354 (471)
T ss_pred HHHHHCCCCCCCCEEEEEEECCCCCCCCEEEEEEEECCHHHHHHHHHH-HHC---CCCCHH-HHHHHHH--HHCHHHHHH
T ss_conf 987526456877279999733556988637899986673899999987-503---687589-9999999--843088999
Q ss_pred ---CCHHHHHHHHHHHHHHHHHCCCCCC---CCCCEEEEEE--------CCHHHHHHHHHHHHHC-CEEEEEECC--CCC
Q ss_conf ---1022478999999998764179789---9897289995--------8979999999999977-918986228--888
Q gi|254780486|r 283 ---PALHKSLLQLINITDKIANKKIGFS---SQSHIQSIVI--------GDNKSCLNIAKNLQKK-GFDIRAIRP--PTV 345 (381)
Q Consensus 283 ---~~~~~~l~~~~~~~~~~~~~~~g~~---~~s~I~~v~~--------gd~~~a~~~~~~L~~~-Gi~v~~i~~--PtV 345 (381)
++-+++++...+++-. .++.+|++ +...+. +++ .+.+.-.++++++.++ ++.++|..- =..
T Consensus 355 ~yl~en~~Rl~~rh~~~~~-gLk~lgI~cl~s~AGlF-~wvDlr~lL~s~tfe~El~Lw~~i~~~vklnlSpG~s~~C~E 432 (471)
T KOG0256 355 EYLRENNKRLRIRHRYIVE-GLKALGIPCLKSNAGLF-CWVDLRKLLTSLTFEGELELWERILDNVKLNLSPGSSCHCHE 432 (471)
T ss_pred HHHHHHHHHHHHHHHHHHH-HHHHCCCCEEECCCCEE-EEEEHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECC
T ss_conf 9999999999999999975-48764884030687069-997667745757818899999999986063257997624368
Q ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 888703999628789999999999999999887
Q gi|254780486|r 346 PINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 346 p~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
|- -.|+|. |...++.++-.++.+.+.+.+
T Consensus 433 pG---WFRvcF-An~~~~t~~~am~Ri~~~~~~ 461 (471)
T KOG0256 433 PG---WFRVCF-ANMSEETLEVAMRRLKQFLDS 461 (471)
T ss_pred CC---EEEEEE-CCCCHHHHHHHHHHHHHHHHH
T ss_conf 98---589984-248877899999999999874
No 308
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.20 E-value=8.6e-10 Score=81.17 Aligned_cols=230 Identities=18% Similarity=0.132 Sum_probs=150.9
Q ss_pred CCCC-CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCC
Q ss_conf 6677-988999999999986378688722443688589999999984012888516741660245655666316897100
Q gi|254780486|r 40 LALS-SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIV 118 (381)
Q Consensus 40 LGl~-~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii 118 (381)
||=+ -+|+.+++..+.. +.| ...--.+--+..-.-...+.+.++...|.|++.++|.-..|-..++.+++.++.+|+
T Consensus 34 lG~s~~~~e~iea~~~~~-~~~-v~Le~~l~~g~~~~R~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~~EvVi 111 (395)
T COG1921 34 LGRSLYSPEAIEAMKEAM-RAP-VELETDLKTGKRGARLTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVV 111 (395)
T ss_pred CCCCCCCHHHHHHHHHHH-CCC-CEEEEECCCCHHHHHHHHHHHHHHCCCCHHHEEEECCCHHHHHHHHHHHCCCCEEEE
T ss_conf 787667989999999985-054-303564012313577799999983664403325678828999998763205771799
Q ss_pred H----HHHCCHHHHHHHHHCCCCCEEECCCC---HHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 4----54202677526664087640305688---1478997643100024786079714621576613468999998631
Q gi|254780486|r 119 Y----DKLVHASIREGINSGKAQAIAIPHNN---INSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIAND 191 (381)
Q Consensus 119 ~----D~~~HaSi~~g~~ls~a~~~~f~HnD---~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~ 191 (381)
+ .+..|+++-+.+++++++.+-+-.-+ ..|++..+.+.. +-.+-|...=|.++|++ +++++++++++
T Consensus 112 s~g~lV~gg~~~v~d~~~~aG~~l~EvG~tn~t~~~d~~~AIne~t-----a~llkV~s~~~~f~~~l-~~~~l~~ia~~ 185 (395)
T COG1921 112 SRGELVEGGAFRVPDIIRLAGAKLVEVGTTNRTHLKDYELAINENT-----ALLLKVHSSNYGFTGML-SEEELVEIAHE 185 (395)
T ss_pred ECCCCCCCCCCCHHHHHHHCCCEEEEECCCCCCCHHHHHHHHCCCC-----EEEEEEEECCCCCCCCC-CHHHHHHHHHH
T ss_conf 7131156889986679997197799815657677888998854587-----05899950366614645-59999999987
Q ss_pred CCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCC-EEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHH
Q ss_conf 360898613112223477764011000013465210013465653-0267524510010000121100001357750257
Q gi|254780486|r 192 YDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGS-SGALVGSNKIIYDYLINYAKPFIYTTSPSPILAV 270 (381)
Q Consensus 192 y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~-~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~a 270 (381)
||+.+++|.+- |.+-+.-.+..+++. ...++++-|-.|.||+ ++|+|+|++++|+.++++.-.+ .--..+...+
T Consensus 186 ~~lpvivD~aS--g~~v~~e~~l~~~la-~GaDLV~~SgdKllgGPqaGii~GkKelI~~lq~~~l~R--alrv~K~tla 260 (395)
T COG1921 186 KGLPVIVDLAS--GALVDKEPDLREALA-LGADLVSFSGDKLLGGPQAGIIVGKKELIEKLQSHPLKR--ALRVDKETLA 260 (395)
T ss_pred CCCCEEEECCC--CCCCCCCCCHHHHHH-CCCCEEEEECCHHCCCCCCCEEECHHHHHHHHHHHHHHH--HHHCCCHHHH
T ss_conf 69977996677--630035544568886-079789975401127985433742499999997621334--3315827689
Q ss_pred HHHHHHHHHHHC
Q ss_conf 898878988627
Q gi|254780486|r 271 VACEALKLIKRK 282 (381)
Q Consensus 271 aa~aal~~l~~~ 282 (381)
+..++|+.....
T Consensus 261 ~l~~aLe~y~~~ 272 (395)
T COG1921 261 ALEAALELYLQP 272 (395)
T ss_pred HHHHHHHHHCCC
T ss_conf 999999987080
No 309
>pfam00282 Pyridoxal_deC Pyridoxal-dependent decarboxylase conserved domain.
Probab=99.19 E-value=4.7e-09 Score=76.57 Aligned_cols=221 Identities=19% Similarity=0.124 Sum_probs=132.0
Q ss_pred HHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCC----CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH-
Q ss_conf 999999999759839992897689803446566779----889999999999863786887224436885899999999-
Q gi|254780486|r 9 YEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSS----STLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEE- 83 (381)
Q Consensus 9 ~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~----~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~- 83 (381)
+++-|++++..- . .-..++.+=.|+|+-. .+.+......+.-...+...-.| +...++|++
T Consensus 19 ~~~vl~~~~~~i-----~--p~~~~~~hP~f~g~~~~~~~~~~~~~d~la~~~n~n~~~~~~s-------Pa~t~lE~~v 84 (370)
T pfam00282 19 LLDILGDIRKNI-----M--PGVTTWHSPNFHAYFPAGNSYPSLLGDMLSDAINCNGFTWESS-------PACTELENVV 84 (370)
T ss_pred HHHHHHHHHHHH-----H--CCCCCCCCCCEEEECCCCCCHHHHHHHHHHHHHCCCCCCHHCC-------HHHHHHHHHH
T ss_conf 999999999887-----1--6788898999048657888889999999999856366662008-------2689999999
Q ss_pred ---HHHHCCCCC---------EEEECCCCHHHHHHHHHHC-------------CCCCCCCHHHHCCHHHHHHHHHCCCCC
Q ss_conf ---840128885---------1674166024565566631-------------689710045420267752666408764
Q gi|254780486|r 84 ---AADFFGFEK---------MLYFGSGYAANMAILSTLP-------------QATDLIVYDKLVHASIREGINSGKAQA 138 (381)
Q Consensus 84 ---lA~~~g~e~---------al~~~sG~~An~~~i~~l~-------------~~~d~ii~D~~~HaSi~~g~~ls~a~~ 138 (381)
+++++|.++ ..+++.|.+||+.++-+-- ...-+|++-+..|.|+..++++.+-.+
T Consensus 85 i~wl~~l~g~p~~~~~~~~~~G~~tsGgs~anl~al~~AR~~~~~~~~~~g~~~~~~vi~~S~~aH~Sv~Kaa~~lGlg~ 164 (370)
T pfam00282 85 MDWLAKMLGLPKEFLGSGQGGGVLQGGSSESNLLALLAARTKWIRRMKAAGKPLGKLVAYTSDQAHSSIEKAALIAGVEL 164 (370)
T ss_pred HHHHHHHHCCCHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHCCCCC
T ss_conf 99999996686444168888648736478999999999999999987641798687499976632799999999749983
Q ss_pred EEECC-----CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCC-CCCCCCC
Q ss_conf 03056-----88147899764310002478607971462157661346899999863136089861311222-3477764
Q gi|254780486|r 139 IAIPH-----NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATG-VCGPLGK 212 (381)
Q Consensus 139 ~~f~H-----nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~G-v~G~~G~ 212 (381)
+..+- -|+++|++.+++.+........+|.+=|-- ..|.+=||++|.++|++||.+|.||-|+|-. .+.+.-+
T Consensus 165 ~~V~~d~~~~m~~~~L~~~i~~~~~~g~~p~~VvataGTT-~tGaiD~l~~i~~i~~~~~lWlHVDaA~GG~~~l~~~~r 243 (370)
T pfam00282 165 REIPTDENGKMRGMDLEKAIEEDKENGLIPFFVCATLGTT-GSGAFDPLQELGDICNKYDLWLHVDAAYAGSAFICPEFR 243 (370)
T ss_pred EEEEECCCCCCCHHHHHHHHHHHHHCCCCCEEEEEECCCC-CCCCCCCHHHHHHHHHHCCCEEEEEHHHHHHHHHCHHHH
T ss_conf 6953689888299999999999986799744999863771-771347899999999983980884233334788298557
Q ss_pred EEEEEHHCCCCCCCCCCCCCCCCC---EEEEEECCCC
Q ss_conf 011000013465210013465653---0267524510
Q gi|254780486|r 213 GLTHIIEERNNVIVMHSCSKALGS---SGALVGSNKI 246 (381)
Q Consensus 213 G~~~~~~~~~~~iv~~TlsKa~g~---~GG~i~~~~~ 246 (381)
-. ..++...+-++-.+.|-++. .|-++.-+++
T Consensus 244 ~~--~~gie~aDSi~~d~HK~l~~P~~~s~~l~rd~~ 278 (370)
T pfam00282 244 HW--LFGIERADSFSFNPHKWMLVLLDCSALWVRDKG 278 (370)
T ss_pred HH--HCCCCCCCEEEECCHHCCCCCCCEEEEEEECHH
T ss_conf 77--569877857977805501878875899994879
No 310
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.18 E-value=1.7e-08 Score=73.13 Aligned_cols=292 Identities=13% Similarity=0.210 Sum_probs=167.9
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEEC-CCCHHH---HHHHHHHC-----CCCCCCCHHHHCCHHHHHHHHHCCCCCEE
Q ss_conf 3688589999999984012888516741-660245---65566631-----68971004542026775266640876403
Q gi|254780486|r 70 LCGNYNQHLELEEEAADFFGFEKMLYFG-SGYAAN---MAILSTLP-----QATDLIVYDKLVHASIREGINSGKAQAIA 140 (381)
Q Consensus 70 ~~G~~~~~~~lE~~lA~~~g~e~al~~~-sG~~An---~~~i~~l~-----~~~d~ii~D~~~HaSi~~g~~ls~a~~~~ 140 (381)
+.|+..+..+||+-|++..|++++-+-| +|.+.- +-+|.++- ...+.+++-..+|..=--.+.+.|-+++.
T Consensus 104 vqG~l~li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNPASAam~G~~VV~ 183 (496)
T COG1003 104 VQGYLELIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNPASAAMAGFKVVV 183 (496)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHCCCEEEE
T ss_conf 89999999999999997409762640678776415678999999999758877767983165568986567654855999
Q ss_pred ECCC-----CHHHHHHHHHHHHHCCCCCCCEEEEC----CCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCC
Q ss_conf 0568-----81478997643100024786079714----62157661346899999863136089861311222347776
Q gi|254780486|r 141 IPHN-----NINSFAENINKWRKSGGKGFPWIVVE----SIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLG 211 (381)
Q Consensus 141 f~Hn-----D~~~Le~~l~~~~~~~~~~~~~vv~e----gv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G 211 (381)
++-+ |++||+.++.+.. -.+-+|- ||| -.++.+|+++-.++|+.|++|-|.-=+++|..-
T Consensus 184 V~~~~~G~VDlddLk~k~~~~~------AalMiTnPsT~GvF-----E~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~r 252 (496)
T COG1003 184 VKCDENGNVDLDDLRAKAEDNL------AALMITNPSTLGVF-----EEDIREICEIVHEAGGQVYYDGANLNAIVGLAR 252 (496)
T ss_pred EECCCCCCCCHHHHHHHHCCCE------EEEEECCCCCCCCC-----HHHHHHHHHHHHHCCCEEEECCCCHHHHHCCCC
T ss_conf 8328988716999998741311------58886168645450-----451999999999729989844754352522556
Q ss_pred CEEEEEHHCCCCCCCCCCCCCCCCC---EE----EEEECCCCCCCCCCC----CC-CCEECC--------CCCCCCHHH-
Q ss_conf 4011000013465210013465653---02----675245100100001----21-100001--------357750257-
Q gi|254780486|r 212 KGLTHIIEERNNVIVMHSCSKALGS---SG----ALVGSNKIIYDYLIN----YA-KPFIYT--------TSPSPILAV- 270 (381)
Q Consensus 212 ~G~~~~~~~~~~~iv~~TlsKa~g~---~G----G~i~~~~~ii~~l~~----~~-~~~ifs--------t~l~P~~~a- 270 (381)
-| .-..+++--.|-|.|+. .| |=|.-.+.++.+|-. +. ..|... -+-+|.-.+
T Consensus 253 PG------d~G~DV~HlNLHKTF~iPHGGGGPG~GPvgVk~~L~pfLP~p~~~~~~~~y~~~~~~~~s~g~~~a~~Gs~~ 326 (496)
T COG1003 253 PG------DMGFDVVHLNLHKTFCIPHGGGGPGAGPVGVKAHLAPFLPGPVVYHDVGEYRLDYDGKKSIGVSAAPYGSAS 326 (496)
T ss_pred CC------CCCCCEEEEECCCCCCCCCCCCCCCCCCEEHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCH
T ss_conf 65------565635775223110258888999877602585512338987334777530036787764226514557616
Q ss_pred HHHHHHHHHHH--CCCHHH---HHHHHHHHHHHHHHCCCCC--CCCCCEE-EEEEC-------CHHHHHHHHHHHHHCCE
Q ss_conf 89887898862--710224---7899999999876417978--9989728-99958-------97999999999997791
Q gi|254780486|r 271 VACEALKLIKR--KPALHK---SLLQLINITDKIANKKIGF--SSQSHIQ-SIVIG-------DNKSCLNIAKNLQKKGF 335 (381)
Q Consensus 271 aa~aal~~l~~--~~~~~~---~l~~~~~~~~~~~~~~~g~--~~~s~I~-~v~~g-------d~~~a~~~~~~L~~~Gi 335 (381)
....+...++. .+.+++ ...-|++|..+.......+ ....+.- -+++. ....+.+++++|++.||
T Consensus 327 il~~a~~YI~~mG~~GL~~ase~AvLNANYia~rL~~~y~~~y~~~~~~~HE~ild~r~l~~~~Gv~~~DvAKrLlD~Gf 406 (496)
T COG1003 327 ILPIAWAYIRMMGADGLKQASEVAVLNANYIARRLKGYYPVPYTGENRVAHECILDARPLKKETGVRALDVAKRLLDYGF 406 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECHHHHHHCCCCHHHHHHHHHHCCC
T ss_conf 89999999998757788898999998479999975402755547887611589960566676429838999999872588
Q ss_pred EEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 898622888888870399962878999999999999999988738
Q gi|254780486|r 336 DIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 336 ~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
...-+.||-+=.++ |=|-+|-.-+++++|++++++.++..|-+
T Consensus 407 HaPT~~FPliV~~t--LMIEPTEsEsk~eLDrf~dami~I~~Ea~ 449 (496)
T COG1003 407 HAPTMYFPLIVAGT--LMIEPTESESKEELDRFIDAMIAIREEAD 449 (496)
T ss_pred CCCCCCCCCCCCCC--EEECCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 88746575335650--45357777688999999999999999987
No 311
>KOG0633 consensus
Probab=99.18 E-value=1.9e-09 Score=79.09 Aligned_cols=266 Identities=21% Similarity=0.207 Sum_probs=138.8
Q ss_pred EEEECCCCHHHH-HHHHHHCCCC-CCCCHHHHCCHHHHH-HHHHCCCCCEEECCC-----CHHHHHHHHHHHHHCCCCCC
Q ss_conf 167416602456-5566631689-710045420267752-666408764030568-----81478997643100024786
Q gi|254780486|r 93 MLYFGSGYAANM-AILSTLPQAT-DLIVYDKLVHASIRE-GINSGKAQAIAIPHN-----NINSFAENINKWRKSGGKGF 164 (381)
Q Consensus 93 al~~~sG~~An~-~~i~~l~~~~-d~ii~D~~~HaSi~~-g~~ls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~ 164 (381)
-+.+.-|..--+ ++|.+.+.|| +-|+. ---.-||+. -+...++.++..+-| |.+...+.|+.- .+.+
T Consensus 88 nic~GvGsDE~ID~iiR~~c~PGkeKIl~-cPPtysMY~v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~d----s~iK 162 (375)
T KOG0633 88 NICVGVGSDELIDLIIRCVCDPGKEKILD-CPPTYSMYVVDAAINDAEVVKVPLNPDFSLNVDAIAEVLELD----SKIK 162 (375)
T ss_pred CEEEECCCHHHHHHHHHHEECCCCCCEEE-CCCCCEEEEEEEECCCCEEEEECCCCCCCCCHHHHHHHHHCC----CCCE
T ss_conf 46772172888988781000588430365-698540589974037734798037887555699999998326----6432
Q ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHC-CEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EE
Q ss_conf 0797146215766134689999986313-6089861311222347776401100001346521001346565302---67
Q gi|254780486|r 165 PWIVVESIYSMDGDKAPLDDLVKIANDY-DGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---AL 240 (381)
Q Consensus 165 ~~vv~egv~Sm~G~~apL~~i~~l~~~y-~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~ 240 (381)
++++-+----+|.+.....|..+-+.. |.+++||||+ +-+.|.. ....+....|++++..||||+||..| ||
T Consensus 163 -~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAY-idFsg~~--S~~~lV~kYpNLivlqTlSKsfGLAGiRvG~ 238 (375)
T KOG0633 163 -CIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAY-IDFSGVE--SRMKLVKKYPNLIVLQTLSKSFGLAGIRVGY 238 (375)
T ss_pred -EEEECCCCCCCCCCCCHHHHHHHHHCCCCCEEEEEEEE-EEECCCC--CCCHHHHHCCCEEEHHHHHHHCCCCEEEEEC
T ss_conf -89981798987330338899999829888379975002-7602540--0245767488652254555541753267503
Q ss_pred EECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHH--HHHHCCCHHH-HHHHHHHHHHHHHHCC----CCCCCCCCEE
Q ss_conf 5245100100001211000013577502578988789--8862710224-7899999999876417----9789989728
Q gi|254780486|r 241 VGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALK--LIKRKPALHK-SLLQLINITDKIANKK----IGFSSQSHIQ 313 (381)
Q Consensus 241 i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~--~l~~~~~~~~-~l~~~~~~~~~~~~~~----~g~~~~s~I~ 313 (381)
.+.+..+++.+...-.||--| -+...++++++. -++..+..+. -.++..+++..+.... ....+.+..+
T Consensus 239 ~~~~~~ia~iln~~KaPYNiS----~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~~~~~~~gg~daNFi 314 (375)
T KOG0633 239 GAFPLSIAEILNRAKAPYNIS----VAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVPFLNDYPGGSDANFI 314 (375)
T ss_pred CCCCHHHHHHHHHCCCCCCCC----CHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEE
T ss_conf 335278999998622885216----2457999986180112278999999999999998776327654577786666579
Q ss_pred EEEE--CCHHHHHHHHHHHH-HCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 9995--89799999999999-779189862288888887039996287899999999999999998
Q gi|254780486|r 314 SIVI--GDNKSCLNIAKNLQ-KKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 314 ~v~~--gd~~~a~~~~~~L~-~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
-+.+ ||+.-+..+...+. +.|+.|+--. +-+.-++.+|+++. |.|+.+.+++.+++++
T Consensus 315 Li~v~~~~n~~akkly~q~at~~gVvVRfrg--se~~c~G~lRitvG---t~EentvL~k~~K~~l 375 (375)
T KOG0633 315 LIEVTGGDNGMAKKLYKQDATKMGVVVRFRG--SEEGCKGYLRITVG---TPEENTVLMKCLKQFL 375 (375)
T ss_pred EEEECCCCCHHHHHHHHHHHHHCCEEEEECC--CCCCCCEEEEEECC---CCCCCHHHHHHHHHHC
T ss_conf 9997078737889999998875666999717--85046500899717---8642208999998659
No 312
>KOG2467 consensus
Probab=99.18 E-value=1.2e-08 Score=73.95 Aligned_cols=319 Identities=18% Similarity=0.201 Sum_probs=177.9
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHH-----HHHHHCCCCC---EEEEC-CCCHHHHH
Q ss_conf 344656677988999999999986378688722443688589999999-----9840128885---16741-66024565
Q gi|254780486|r 35 TSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEE-----EAADFFGFEK---MLYFG-SGYAANMA 105 (381)
Q Consensus 35 ~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~-----~lA~~~g~e~---al~~~-sG~~An~~ 105 (381)
+|-|| .+.+|.+|.--.+.++|.-|..|.|-..|| +...+.|. .|..|-=-++ .-+-| ||..||.+
T Consensus 47 aSENF----ts~aVmeAlGS~ltNKYSEGyPG~RYYGGn-e~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfa 121 (477)
T KOG2467 47 ASENF----TSRAVMEALGSCLTNKYSEGYPGARYYGGN-EYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFA 121 (477)
T ss_pred ECCCC----HHHHHHHHHHHHHHCCCCCCCCCCCCCCCC-HHHHHHHHHHHHHHHHHHCCCHHHCCEEECCCCCCCHHHH
T ss_conf 13551----179999987577506555688865133753-5789999999999999809988887333002789830567
Q ss_pred HHHHHCCCCCCCCH------HHHCCHHHHHHHHHCCCCC----EEECCC------CHHHHHHHHHHHHHCCCCCCCEEEE
Q ss_conf 56663168971004------5420267752666408764----030568------8147899764310002478607971
Q gi|254780486|r 106 ILSTLPQATDLIVY------DKLVHASIREGINSGKAQA----IAIPHN------NINSFAENINKWRKSGGKGFPWIVV 169 (381)
Q Consensus 106 ~i~~l~~~~d~ii~------D~~~HaSi~~g~~ls~a~~----~~f~Hn------D~~~Le~~l~~~~~~~~~~~~~vv~ 169 (381)
+..++.+|++.|.. -.+.|.-.-++-+.|...+ .+|+-| |.+.||+.....|. +++|+-
T Consensus 122 vYtall~Ph~RiMGLDLP~GGHLsHGy~T~~kkISa~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frP-----k~iiaG 196 (477)
T KOG2467 122 VYTALLKPHERIMGLDLPSGGHLSHGYQTPTKKISATSIYFESMPYKVDPSTGYIDYDKLEKTATLFRP-----KLIIAG 196 (477)
T ss_pred HHHHHCCCCCEEEECCCCCCCCCCCCCCCCCCEEEEEEEECCCCCEEECCCCCCEEHHHHHHHHHHCCC-----CEEEEC
T ss_conf 875414877713403579887555640168854224664300486102798781306888888875187-----379953
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEE-EEHHCCCCCCCCCCCCCCC-CCEEEEEECCCCC
Q ss_conf 4621576613468999998631360898613112223477764011-0000134652100134656-5302675245100
Q gi|254780486|r 170 ESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLT-HIIEERNNVIVMHSCSKAL-GSSGALVGSNKII 247 (381)
Q Consensus 170 egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~-~~~~~~~~~iv~~TlsKa~-g~~GG~i~~~~~i 247 (381)
-+-||-+= +-++++++|++.|++|+.|=||-.|.+ .. |+. ..| ..-+||+.|--|++ |..||.|.-++-+
T Consensus 197 ~SaY~R~~---DYaR~R~Iad~~gA~Lm~DMAHISgLV-AA--~vipsPF--ey~DiVTTTTHKsLRGPRg~mIFyRkGv 268 (477)
T KOG2467 197 TSAYSRLI---DYARFRKIADKVGAYLMADMAHISGLV-AA--GVIPSPF--EYCDIVTTTTHKSLRGPRGAMIFYRKGV 268 (477)
T ss_pred CCCCHHHC---CHHHHHHHHHHCCCEEEHHHHHHHHHH-HC--CCCCCCC--CCCCEEECCCCCCCCCCCCEEEEEECCC
T ss_conf 63213231---389999998752806641356677777-52--6679964--2012464134345568763168983267
Q ss_pred CCC-----------CCCCCCCEECC--CCCCCC-HHHHHHHHHHHHHHC--CCHHHHHHHHHHHH-HHHHHCCCCC---C
Q ss_conf 100-----------00121100001--357750-257898878988627--10224789999999-9876417978---9
Q gi|254780486|r 248 YDY-----------LINYAKPFIYT--TSPSPI-LAVVACEALKLIKRK--PALHKSLLQLINIT-DKIANKKIGF---S 307 (381)
Q Consensus 248 i~~-----------l~~~~~~~ifs--t~l~P~-~~aaa~aal~~l~~~--~~~~~~l~~~~~~~-~~~~~~~~g~---~ 307 (381)
... +..+-..-+|- .+.|.- ..++..-+|+.-.+- .+-+++..+|.+.+ ..+...+..+ .
T Consensus 269 k~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvALkQa~tpefk~Yq~qV~~Nakala~~l~~~Gy~lvtgG 348 (477)
T KOG2467 269 KSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVALKQAMTPEFKEYQKQVLKNAKALASALISRGYKLVTGG 348 (477)
T ss_pred CCCCCCCCCCCEECHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCC
T ss_conf 76787889764012665301222665568987335899999998607877999999999999999999997296674078
Q ss_pred CCCCEEEEEEC----CHHHHHHHHHHHHHCCEEEEEE-----CCCCCCCCCCEEEEECCCC----CCHHHHHHHHHHHHH
Q ss_conf 98972899958----9799999999999779189862-----2888888870399962878----999999999999999
Q gi|254780486|r 308 SQSHIQSIVIG----DNKSCLNIAKNLQKKGFDIRAI-----RPPTVPINTARLRISITLN----VDEPTIVKLFDILPQ 374 (381)
Q Consensus 308 ~~s~I~~v~~g----d~~~a~~~~~~L~~~Gi~v~~i-----~~PtVp~~~~rlRi~v~a~----~t~edi~~~~~~l~~ 374 (381)
++.+.+-+-+. |..++-.+.+. -+|-++-- .-+.+| +.||+--+|. ..++|.++..+-|.+
T Consensus 349 TDnHlvLvDLr~~G~dGarvE~vle~---~~I~~NKNtvpGD~Sal~P---gGiRiGtPAmTsRG~~e~df~~v~~fi~~ 422 (477)
T KOG2467 349 TDNHLVLVDLRPKGVDGARVEKVLEL---CHIALNKNTVPGDKSALSP---GGIRIGTPAMTSRGFGEEDFEKVADFIDR 422 (477)
T ss_pred CCCEEEEEECCCCCCCHHHHHHHHHH---HHHHHCCCCCCCCCCCCCC---CCEECCCHHHCCCCCCHHHHHHHHHHHHH
T ss_conf 66527999656467750899999987---5413337767787445588---84331661221367668889999999999
Q ss_pred HHH
Q ss_conf 988
Q gi|254780486|r 375 IIS 377 (381)
Q Consensus 375 v~~ 377 (381)
.++
T Consensus 423 av~ 425 (477)
T KOG2467 423 AVK 425 (477)
T ss_pred HHH
T ss_conf 999
No 313
>pfam03841 SelA L-seryl-tRNA selenium transferase.
Probab=99.13 E-value=6.4e-09 Score=75.75 Aligned_cols=220 Identities=21% Similarity=0.231 Sum_probs=138.9
Q ss_pred CHHHHHHHHHHHHHHCCCC----CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHH
Q ss_conf 8899999999998637868----872244368858999999998401288851674166024565566631689710045
Q gi|254780486|r 45 STLLREKILSSLDSKIPIG----SGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYD 120 (381)
Q Consensus 45 ~p~v~~a~~~a~~~~~g~~----~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D 120 (381)
+|++.+++.+.. ..|-.- ..|.| |.. +..+|+.|++++|.|+|+++|+...|-.-++.+++....+|++-
T Consensus 19 ~~~a~~a~~~~~-~~y~nLE~dl~~g~R---G~R--~~~~~~ll~~ltgaE~a~vVNnnAaAv~L~l~~la~g~evivSR 92 (367)
T pfam03841 19 SEEAVEAAKEAA-RHYSNLEYDLESGKR---GSR--DSHLEELLCELTGAEDALVVNNNAAAVLLVLNTLAQGKEVIISR 92 (367)
T ss_pred CHHHHHHHHHHH-CCCCHHHHHHHHCCC---CCH--HHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHHCCCCEEEEC
T ss_conf 999999999986-177203666741776---635--78999999986398659998783899999999875489057755
Q ss_pred -HHCC--HH--HHHHHHHCCCCCEEECCCCH---HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCC--HHHHHHHHHHHH
Q ss_conf -4202--67--75266640876403056881---47899764310002478607971462157661--346899999863
Q gi|254780486|r 121 -KLVH--AS--IREGINSGKAQAIAIPHNNI---NSFAENINKWRKSGGKGFPWIVVESIYSMDGD--KAPLDDLVKIAN 190 (381)
Q Consensus 121 -~~~H--aS--i~~g~~ls~a~~~~f~HnD~---~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~--~apL~~i~~l~~ 190 (381)
++++ .| |-+=++.||++.+-+-.-|- .|.|+.+.+.. .-++-|--+=|.+.|- -++++++.+|++
T Consensus 93 GelVeiGgsfRiPdim~~sGa~LvEVGtTNrT~l~DYe~AI~e~T-----a~llkVH~SN~~i~GFt~~v~~~el~~la~ 167 (367)
T pfam03841 93 GELVEIGGSFRIPDIMKQSGARLVEVGTTNRTHLKDYEQAINENT-----ALLMKVHTSNYRIQGFTKEVSLAELVALGK 167 (367)
T ss_pred CEEECCCCCCCCHHHHHHCCCEEEEECCCCCCCHHHHHHHCCCCC-----EEEEEEECCCCEECCCCCCCCHHHHHHHHH
T ss_conf 545123875440899996597899825668889899998708246-----189999426512237467799999999998
Q ss_pred HCCEEEEECCCCCCCCCCC-CCCEEEEEHHC-----CCCCCCCCCCCCCCCC-EEEEEECCCCCCCCCCCCC--CCEECC
Q ss_conf 1360898613112223477-76401100001-----3465210013465653-0267524510010000121--100001
Q gi|254780486|r 191 DYDGFIVVDEAHATGVCGP-LGKGLTHIIEE-----RNNVIVMHSCSKALGS-SGALVGSNKIIYDYLINYA--KPFIYT 261 (381)
Q Consensus 191 ~y~~~LivDEah~~Gv~G~-~G~G~~~~~~~-----~~~~iv~~TlsKa~g~-~GG~i~~~~~ii~~l~~~~--~~~ifs 261 (381)
+||..+++|=. .|.+-+ ...|+.+...+ ...++++=|=-|-||+ +.|.|+|++++|+.++++- |++
T Consensus 168 ~~~ip~i~DlG--SG~l~d~~~~gl~~Ep~v~~~l~~GaDlV~FSGDKLLGGPQAGII~Gkk~lI~~ikknPL~RAl--- 242 (367)
T pfam03841 168 EHGLPVYYDLG--SGSLVDLSQYGLPKEPTVQELLALGVDLVSFSGDKLLGGPQAGIIVGKKELIERLKKNPLKRAL--- 242 (367)
T ss_pred HCCCCEEEECC--CCCEECCCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCCCCCCEEEECHHHHHHHHHCCHHHHH---
T ss_conf 76996799758--6631122001799999899999739988998676456898532476459999974647444544---
Q ss_pred CCCCCCHHHHHHHHHHHHHH
Q ss_conf 35775025789887898862
Q gi|254780486|r 262 TSPSPILAVVACEALKLIKR 281 (381)
Q Consensus 262 t~l~P~~~aaa~aal~~l~~ 281 (381)
-......++..++|+...+
T Consensus 243 -RvDKltLaaLeatL~~Yl~ 261 (367)
T pfam03841 243 -RVDKLTLAALEATLRLYLN 261 (367)
T ss_pred -CCCHHHHHHHHHHHHHHHC
T ss_conf -4588999999999999849
No 314
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase; InterPro: IPR011821 Proteins in this entry are important in the interconversion of the sulphur-containing amino acids L-cysteine and L-methionine in bacteria. In bacteria, inorganic sulphur is reduced to sulphide, which is then used to displace the acetyl group of O-acetyl-L-serine to form the essential amino acid L-cysteine. Biosynthesis of L-methionine then occurs via the transsulphuration pathway which involves the sequential action of two pyridoxal 5'-phosphate (PLP) enzymes, cystathionine gamma-synthase (CGS) and cystathionine beta-lyase (CBL). Firstly CGS catalyses the formation of the intermediate cystathione from a homoserine ester and L-cysteine. This intermediate is then converted by CBL to L-homoserine, which is subsequently methylated by methionine synthase to form L-methionine. For more information see . The CGS enzyme (P00935 from SWISSPROT) from Escherichia coli is, like other CGS enzymes, a homotetramer composed of two catalytically active dimers . The active site of each dimer is found at the interface between the monomers and involves residues from each monomer. Catalysis occurs by alpha,gamma-elimination/replacement reactions..
Probab=99.13 E-value=1.8e-08 Score=72.92 Aligned_cols=281 Identities=16% Similarity=0.223 Sum_probs=168.5
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCH-H--HHHH-HHHCCCCCEEECCCCH
Q ss_conf 6885899999999840128885167416602456556663168971004542026-7--7526-6640876403056881
Q gi|254780486|r 71 CGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHA-S--IREG-INSGKAQAIAIPHNNI 146 (381)
Q Consensus 71 ~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~Ha-S--i~~g-~~ls~a~~~~f~HnD~ 146 (381)
+|| |.-.=|++.||++=+-+.|++.|||+.|---++.++.+|+|+||.-..|=. | +.+. ++....++....-+|-
T Consensus 48 sGN-PTRd~l~~aLA~LE~G~~AVvT~~GMsAI~L~~~~lL~pdDLlvAPHDCYGGtYRLl~~lA~kG~~~v~fVDQ~D~ 126 (383)
T TIGR02080 48 SGN-PTRDILQQALAELEGGAGAVVTNSGMSAIDLVTTALLGPDDLLVAPHDCYGGTYRLLNALAKKGQFKVQFVDQSDE 126 (383)
T ss_pred CCC-CCHHHHHHHHHHHHCCCCCEECCCHHHHHHHHHHHEECCCCEEEECCCCCCCHHHHHHHHHHCCCEEEEEEECCHH
T ss_conf 989-7565899999998489982566856898876643120789768804326770488886452078338998607628
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEECCC-CCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCC
Q ss_conf 47899764310002478607971462-15766134689999986313608986131122234777640110000134652
Q gi|254780486|r 147 NSFAENINKWRKSGGKGFPWIVVESI-YSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVI 225 (381)
Q Consensus 147 ~~Le~~l~~~~~~~~~~~~~vv~egv-~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~i 225 (381)
+.|++.|.+.. .++|.+|+= ..|= =+.|+..|+.|+++-|.+.+||-. ++-|= ++..+ ...-|+
T Consensus 127 ~al~~ALa~kd------PKLVlIEtPSNPLl-RVVDI~~lc~La~~~G~~vvVDNT----FLsP~---lQ~PL-~LGAD~ 191 (383)
T TIGR02080 127 QALEAALAQKD------PKLVLIETPSNPLL-RVVDIAKLCKLAKAVGAVVVVDNT----FLSPI---LQQPL-SLGADL 191 (383)
T ss_pred HHHHHHHHHCC------CCEEEEECCCCCCC-HHHHHHHHHHHHHHCCEEEEEECC----CCCHH---HCCCC-CHHCCE
T ss_conf 99999997469------84799867998852-188899999887618838998552----16776---72753-011113
Q ss_pred CCCCCCCCC-CC---EEE-EEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHHHH
Q ss_conf 100134656-53---026-7524510010000121100001357750257898878988627102-24789999999987
Q gi|254780486|r 226 VMHSCSKAL-GS---SGA-LVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINITDKI 299 (381)
Q Consensus 226 v~~TlsKa~-g~---~GG-~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~~~ 299 (381)
+++|.+|=+ |- +|| .|+-++.+.+.|.+.+... .. ...|--....+--|+.|--+-.. ++..+++++|++..
T Consensus 192 V~HS~TKYlNGHSDVi~GaVIaKd~q~~e~L~WW~N~l-G~-tG~aFDSY~tLRGlRTL~~Rm~~~qrnA~~Iv~yL~~~ 269 (383)
T TIGR02080 192 VIHSTTKYLNGHSDVIAGAVIAKDPQLAEELAWWANAL-GV-TGGAFDSYLTLRGLRTLAARMRSQQRNAQTIVEYLQTQ 269 (383)
T ss_pred EHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHCC-CC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 01111100034034312124014712234433343002-55-44434688998678888888888878899999998448
Q ss_pred H-HCCCCCCC----------------CCCEEEEEE-CCHHHHHHHHHHHHHCCEEE---------EEECCCCC-------
Q ss_conf 6-41797899----------------897289995-89799999999999779189---------86228888-------
Q gi|254780486|r 300 A-NKKIGFSS----------------QSHIQSIVI-GDNKSCLNIAKNLQKKGFDI---------RAIRPPTV------- 345 (381)
Q Consensus 300 ~-~~~~g~~~----------------~s~I~~v~~-gd~~~a~~~~~~L~~~Gi~v---------~~i~~PtV------- 345 (381)
- -+++-+++ -..+.++.+ |+......|-..| -.|. +-|..|++
T Consensus 270 P~V~k~YyPgLpdH~GH~IA~~QQ~GFGAmlSFEL~G~~~~v~~FL~~L---~LFtLAESLGGVESLiaHPATMTH~aM~ 346 (383)
T TIGR02080 270 PLVKKVYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEEAVRRFLGKL---SLFTLAESLGGVESLIAHPATMTHAAMG 346 (383)
T ss_pred CCEEEEECCCCCCCCCHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHC---CCHHHHHHHCCHHHHHCHHHCCCCHHHH
T ss_conf 9402633587888667699986256543302333218868999998431---4012123315512333301012602101
Q ss_pred -------CCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf -------8887039996287899999999999999998
Q gi|254780486|r 346 -------PINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 346 -------p~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
......||+++.. ||.+.+++=|++-+
T Consensus 347 ~eAR~~AGI~~~LLRlSvGl----ED~~DLiaDL~~gl 380 (383)
T TIGR02080 347 PEARAEAGISDTLLRLSVGL----EDADDLIADLDQGL 380 (383)
T ss_pred HHHHHHCCCCCCCCEEEEEE----CCHHHHHHHHHHHH
T ss_conf 89897458411420002100----34688999999997
No 315
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.13 E-value=2.8e-08 Score=71.78 Aligned_cols=249 Identities=15% Similarity=0.196 Sum_probs=126.3
Q ss_pred EEEECCCCHHHHHHHHHHC--CC-CCCCCHHHH--CCHHHHHHHHHCCCCCEEECCC-------CHHHHHHHHHHHHHCC
Q ss_conf 1674166024565566631--68-971004542--0267752666408764030568-------8147899764310002
Q gi|254780486|r 93 MLYFGSGYAANMAILSTLP--QA-TDLIVYDKL--VHASIREGINSGKAQAIAIPHN-------NINSFAENINKWRKSG 160 (381)
Q Consensus 93 al~~~sG~~An~~~i~~l~--~~-~d~ii~D~~--~HaSi~~g~~ls~a~~~~f~Hn-------D~~~Le~~l~~~~~~~ 160 (381)
++=.++|+.|.--...-|. .+ ..+.+.|.. ||..|.. ..|-++..|++- |.+.+-+.|++.
T Consensus 97 ~vQt~gGTGAlrl~a~fl~~~~p~~~v~is~PtW~Nh~~If~---~aGl~v~~Y~y~d~~t~~ldf~~~~~~L~~a---- 169 (397)
T PRK09257 97 TVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHRAIFE---AAGLEVKTYPYYDAATKGLDFDGMLADLSQA---- 169 (397)
T ss_pred EEECCCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH---HCCCEEEEEEEECCCCCCCCHHHHHHHHHHC----
T ss_conf 885477536899999999985899869976999620389999---7798057765564545762899999999828----
Q ss_pred CCCCCEEEECCCC----CCCCCHHHHHHHHHHHHHCCEEEEECCCC-CCCCCCCCCCEEE-------EEHHCCCCCCCCC
Q ss_conf 4786079714621----57661346899999863136089861311-2223477764011-------0000134652100
Q gi|254780486|r 161 GKGFPWIVVESIY----SMDGDKAPLDDLVKIANDYDGFIVVDEAH-ATGVCGPLGKGLT-------HIIEERNNVIVMH 228 (381)
Q Consensus 161 ~~~~~~vv~egv~----Sm~G~~apL~~i~~l~~~y~~~LivDEah-~~Gv~G~~G~G~~-------~~~~~~~~~iv~~ 228 (381)
+++. +|+.-+-. .+|=+...-++|.+++++.+.+.++|-|+ |+| .|+- .+....+.+++.-
T Consensus 170 ~~gs-vvlLh~ccHNPTG~D~t~eqW~~ia~~~~~k~l~p~~D~AYqGf~------sGl~~Da~~iR~f~~~~~e~lva~ 242 (397)
T PRK09257 170 PAGD-VVLLHGCCHNPTGADLTPEQWDEVAELLKERGLIPFLDIAYQGFG------DGLEEDAYGLRLFAAAGLELLVAS 242 (397)
T ss_pred CCCC-EEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHCCCCC------CCHHHHHHHHHHHHHHCCCEEEEE
T ss_conf 9999-899725667988999899999999999996698688840014334------668999999999997288579984
Q ss_pred CCCCCCCCEE---E---EEECCCCCCC----CCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCC-----------HHH
Q ss_conf 1346565302---6---7524510010----00012110000135775025789887898862710-----------224
Q gi|254780486|r 229 SCSKALGSSG---A---LVGSNKIIYD----YLINYAKPFIYTTSPSPILAVVACEALKLIKRKPA-----------LHK 287 (381)
Q Consensus 229 TlsKa~g~~G---G---~i~~~~~ii~----~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~-----------~~~ 287 (381)
||||.||..| | ++..+++.++ .++...|+. || .||..-+.+. -.++ ++++ .++
T Consensus 243 SfSKnfgLY~eRvG~l~vv~~~~~~~~~v~s~l~~~~R~~-~S--~PP~hGA~iv--~~IL-~d~~L~~~W~~El~~m~~ 316 (397)
T PRK09257 243 SFSKNFGLYGERVGALSVVAEDAEEAARVLSQLKATIRTN-YS--NPPAHGAAIV--ATIL-NDPELRAEWEQELAEMRD 316 (397)
T ss_pred ECCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHC-CC--CCCHHHHHHH--HHHH-CCHHHHHHHHHHHHHHHH
T ss_conf 0375433346775038998188889999999999999734-58--8983899999--9996-799999999999999999
Q ss_pred HHHHHHH-HHHHHHHCCCC--C---CCCCCEEEEEECCHHHHHHHHHHHH-HCCEEEEEECCCCCCCCCCEEEEECCCCC
Q ss_conf 7899999-99987641797--8---9989728999589799999999999-77918986228888888703999628789
Q gi|254780486|r 288 SLLQLIN-ITDKIANKKIG--F---SSQSHIQSIVIGDNKSCLNIAKNLQ-KKGFDIRAIRPPTVPINTARLRISITLNV 360 (381)
Q Consensus 288 ~l~~~~~-~~~~~~~~~~g--~---~~~s~I~~v~~gd~~~a~~~~~~L~-~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~ 360 (381)
++.++.+ +.+++.....+ + ..+.-.. -++|-.. +-.++|. +++||.. ..+ ||.+. ..
T Consensus 317 Ri~~~R~~L~~~L~~~~~~~~w~~i~~q~GmF-s~~gls~---~qv~~Lr~~~~IYl~---------~~G--RInia-GL 380 (397)
T PRK09257 317 RIKAMRQLLVEALKAKGPDRDFSFILRQRGMF-SYSGLTP---EQVDRLREEFGIYAV---------GSG--RINVA-GL 380 (397)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCHHHHHCCCEE-ECCCCCH---HHHHHHHHHCCEEEC---------CCC--EEEEE-CC
T ss_conf 99999999999999758999962675076605-6689799---999999984725146---------995--68982-07
Q ss_pred CHHHHHHHHHHHHHHHH
Q ss_conf 99999999999999988
Q gi|254780486|r 361 DEPTIVKLFDILPQIIS 377 (381)
Q Consensus 361 t~edi~~~~~~l~~v~~ 377 (381)
++..|+.++++|.+|++
T Consensus 381 n~~ni~~vA~AI~~V~~ 397 (397)
T PRK09257 381 NEDNIDYVAKAIAAVLK 397 (397)
T ss_pred CHHHHHHHHHHHHHHHC
T ss_conf 76638999999999859
No 316
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein; InterPro: IPR011340 This entry describes probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. The most closely related characterised proteins are active as cysteine desulphurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown..
Probab=99.11 E-value=1.1e-07 Score=68.09 Aligned_cols=323 Identities=15% Similarity=0.176 Sum_probs=192.9
Q ss_pred CCCEEEECCCCCCCCCCCCH-HHHHHHHHHHHHHCCCCCCCCCCCCCC--CHHHHHHHHHHHHHCCCCCE--EEECCCCH
Q ss_conf 89768980344656677988-999999999986378688722443688--58999999998401288851--67416602
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSST-LLREKILSSLDSKIPIGSGGSRLLCGN--YNQHLELEEEAADFFGFEKM--LYFGSGYA 101 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p-~v~~a~~~a~~~~~g~~~~~sr~~~G~--~~~~~~lE~~lA~~~g~e~a--l~~~sG~~ 101 (381)
.+|+.+.|-. =+=++=| .|++|+.+++ .+++.+.++.---+|. ..+-.+.=+.+|+|+|.+.- ++|.
T Consensus 18 ~~~~~~~~Dn---pAG~q~Pq~V~dAv~~~L-~~~~A~~gg~~~~~G~~~~~~vd~AR~a~A~LlnA~~Pe~vv~G---- 89 (410)
T TIGR01976 18 KDKDVVFFDN---PAGTQIPQSVLDAVSAAL-TRSNANRGGAYESSGRKADQVVDDAREAVADLLNAESPEEVVFG---- 89 (410)
T ss_pred CCCCEEEEEC---CCCCCCCHHHHHHHHHHH-HHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEC----
T ss_conf 8973689757---888877734799999998-74130137677663068999999999999997267988856767----
Q ss_pred HHHHHH--------HHHCCCCCCCCH---HHHCCHHHHH-HHHHCCCCCEEECC------CCHHHHHHHHHHHHHCCCCC
Q ss_conf 456556--------663168971004---5420267752-66640876403056------88147899764310002478
Q gi|254780486|r 102 ANMAIL--------STLPQATDLIVY---DKLVHASIRE-GINSGKAQAIAIPH------NNINSFAENINKWRKSGGKG 163 (381)
Q Consensus 102 An~~~i--------~~l~~~~d~ii~---D~~~HaSi~~-g~~ls~a~~~~f~H------nD~~~Le~~l~~~~~~~~~~ 163 (381)
+|.+.+ .-..++||.||. |..+-.|=|. .+.-.+++++-.+- .+.++|+.+| .+.
T Consensus 90 ~~~T~L~~~ls~a~~~~~~~GDEvivt~LDHeaNispW~~~a~~~Ga~Vkw~~~d~~~~~L~~~~L~~Ll-------s~r 162 (410)
T TIGR01976 90 ANATSLAYLLSRALSRRWGPGDEVIVTRLDHEANISPWLQAAEDAGAKVKWARVDEADGELHPDDLASLL-------SPR 162 (410)
T ss_pred CCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHCCC-------CCC
T ss_conf 8668999999999851268985589716766001368999998389789996336231544869982366-------882
Q ss_pred CCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEEEEEEC
Q ss_conf 60797146215766134689999986313608986131122234777640110000134652100134656530267524
Q gi|254780486|r 164 FPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSGALVGS 243 (381)
Q Consensus 164 ~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~GG~i~~ 243 (381)
+.+|.+-.==-.-|.+.+|+.|.++.++.|++.+||=+| |+|++ +.+-... +-|+++-|==|=||-.=|++.+
T Consensus 163 TRLVAvt~ASn~~Gs~~dl~A~~~~vh~aGA~v~VDaVh----yaPH~--L~Dvqa~-gaD~l~cSaYK~fGPH~G~l~~ 235 (410)
T TIGR01976 163 TRLVAVTAASNLLGSIVDLAALTELVHAAGALVYVDAVH----YAPHG--LIDVQAL-GADFLVCSAYKFFGPHLGILWG 235 (410)
T ss_pred HHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCEEEECHHH----HCCCC--CCCHHHH-CCCEEEECCEECCCCCEEEEEE
T ss_conf 255562344023255115889999998759879881110----04566--6413422-7887998563116885017871
Q ss_pred CCCCCCCCCCC-------CCCEECC-CCCCCCHHHHHHHHHHHHHHCC---------CHHHHHHH----HHHHHH----H
Q ss_conf 51001000012-------1100001-3577502578988789886271---------02247899----999999----8
Q gi|254780486|r 244 NKIIYDYLINY-------AKPFIYT-TSPSPILAVVACEALKLIKRKP---------ALHKSLLQ----LINITD----K 298 (381)
Q Consensus 244 ~~~ii~~l~~~-------~~~~ifs-t~l~P~~~aaa~aal~~l~~~~---------~~~~~l~~----~~~~~~----~ 298 (381)
+.++++.|+-+ ..|.-|= +.++.=..|...++++.|+.-. .+|++|.. ...|.. +
T Consensus 236 R~~~~~~l~~~k~~~~~d~~P~r~E~GT~~yEllAG~~AavdYLa~lg~nlA~~~~gsrR~~lv~sf~~~~ayE~~l~~~ 315 (410)
T TIGR01976 236 RPELLKSLPPYKLEFSEDTGPERFELGTLQYELLAGVVAAVDYLAGLGRNLAASANGSRRERLVASFEAIEAYENRLAER 315 (410)
T ss_pred CHHHHCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 14664046876336778888851451455602678999999999982321068988655899999999999999999999
Q ss_pred H--HHCCCC------C------CCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCC--------CCCCCCCEEEEEC
Q ss_conf 7--641797------8------9989728999589799999999999779189862288--------8888870399962
Q gi|254780486|r 299 I--ANKKIG------F------SSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPP--------TVPINTARLRISI 356 (381)
Q Consensus 299 ~--~~~~~g------~------~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~P--------tVp~~~~rlRi~v 356 (381)
+ .++.+| . ....|.+++-+.+ ..+..++++|-+++|.+..--+- -++...+-+|+.+
T Consensus 316 Ll~~L~~~P~~t~yG~~d~~R~~~RvPTv~F~v~~-~~P~~~~~~La~~~v~~~~GHfYA~~~~~~LGl~~~~GvvR~gL 394 (410)
T TIGR01976 316 LLAGLSDLPGVTVYGVQDEKRLAERVPTVAFTVAG-LSPQRVVRRLADQGVDVWAGHFYAVRLLRRLGLEADGGVVRVGL 394 (410)
T ss_pred HHHHHHHCCCEEEECHHHHHHHHHCCCEEEEEECC-CCHHHHHHHHHHCCCEEECCCCHHHHHHHHCCCCCCCCEEEEEE
T ss_conf 99998748956997355786464259758897278-78799999985368633126411689998658989887389852
Q ss_pred CCCCCHHHHHHHHHHH
Q ss_conf 8789999999999999
Q gi|254780486|r 357 TLNVDEPTIVKLFDIL 372 (381)
Q Consensus 357 ~a~~t~edi~~~~~~l 372 (381)
--..|.||||+++++|
T Consensus 395 aHY~t~eevd~l~~aL 410 (410)
T TIGR01976 395 AHYNTAEEVDRLLEAL 410 (410)
T ss_pred CCCCCHHHHHHHHHCC
T ss_conf 5779889999998509
No 317
>pfam06838 Alum_res Aluminium resistance protein. This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria.
Probab=99.11 E-value=5e-09 Score=76.41 Aligned_cols=265 Identities=17% Similarity=0.187 Sum_probs=142.2
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHH-HHHHHHHHHHCCCCCEEEEC---CCCHHHHHHHHHHCCCCCCCCH
Q ss_conf 9889999999999863786887224436885899-99999984012888516741---6602456556663168971004
Q gi|254780486|r 44 SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQH-LELEEEAADFFGFEKMLYFG---SGYAANMAILSTLPQATDLIVY 119 (381)
Q Consensus 44 ~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~-~~lE~~lA~~~g~e~al~~~---sG~~An~~~i~~l~~~~d~ii~ 119 (381)
|.-.|.+|+++.=...+ +..+|- =+|+.+.= +.||+-.|+.||.|+|++=+ ||++|-..++.++.+|+|.+++
T Consensus 26 Nq~KVL~Af~~~~vs~~--hf~~sT-GYGy~D~GRd~Le~vyA~vfgaE~ALVR~q~vSGTHAi~~aLfg~LrPGD~ll~ 102 (405)
T pfam06838 26 NQLKVLNAFQEHRVSDS--HFTGST-GYGYDDIGRDTLERVYARVFGAEAALVRPQFVSGTHAIATALFGVLRPGDELLY 102 (405)
T ss_pred HHHHHHHHHHHCCCCHH--HCCCCC-CCCCCCCCHHHHHHHHHHHHCCHHHHCCCCCCCHHHHHHHHHHHCCCCCCEEEE
T ss_conf 99999999998097776--668888-778776468999999999967377650343255289999999836789987874
Q ss_pred ------HHH---------CCHHHHH-HHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEC--CCCCCCC--CH
Q ss_conf ------542---------0267752-66640876403056881478997643100024786079714--6215766--13
Q gi|254780486|r 120 ------DKL---------VHASIRE-GINSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVE--SIYSMDG--DK 179 (381)
Q Consensus 120 ------D~~---------~HaSi~~-g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~e--gv~Sm~G--~~ 179 (381)
|-+ ...|+.+ |+.-.......=..-|++.++..++. ...+|.+- -=||..- ++
T Consensus 103 itG~PYDTL~eVIGi~g~~~GSL~e~Gv~Y~~v~L~~~g~~D~~~i~~ai~~-------~tk~v~IQRS~GYs~R~slsi 175 (405)
T pfam06838 103 ITGKPYDTLEEVIGIRGEGQGSLKDFGIGYREVPLLENGKVDWQAVKTAITP-------NTKLIGIQRSKGYAWRPSLTI 175 (405)
T ss_pred CCCCCCHHHHHHHCCCCCCCCCHHHHCCCCEEECCCCCCCCCHHHHHHHCCC-------CCEEEEEECCCCCCCCCCCCH
T ss_conf 4899736589871858899888899596603643577898499999976175-------645999962568666888799
Q ss_pred HHHHHHHHHHHHC--CEEEEECCCCCCCCCCCCCCEEEEEHHC--CCCCCCCCCCCCCCCC----EEEEEECCCCCCCCC
Q ss_conf 4689999986313--6089861311222347776401100001--3465210013465653----026752451001000
Q gi|254780486|r 180 APLDDLVKIANDY--DGFIVVDEAHATGVCGPLGKGLTHIIEE--RNNVIVMHSCSKALGS----SGALVGSNKIIYDYL 251 (381)
Q Consensus 180 apL~~i~~l~~~y--~~~LivDEah~~Gv~G~~G~G~~~~~~~--~~~~iv~~TlsKa~g~----~GG~i~~~~~ii~~l 251 (381)
..++++++..++. +++.+||..+ |+. .|.... -..+++.|||=|-.|+ .||||+|++++++..
T Consensus 176 ~~I~~~i~~vk~~~pd~ivfVDNCY-----GEF----vE~~EP~~vGADliaGSLIKNpGGgiaptGGYIaGk~dlVe~a 246 (405)
T pfam06838 176 AEIKEMIKFVKEINPNVIVFVDNCY-----GEF----VETKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKEELVEQA 246 (405)
T ss_pred HHHHHHHHHHHHHCCCEEEEEECCC-----CCC----CCCCCCCCCCHHHEECCCEECCCCCCCCCCCEEECHHHHHHHH
T ss_conf 9999999999976899399997886-----020----2675853016344012012479977367577785369999998
Q ss_pred C--CCCCCEECCCCCCCCHHHHHHHHHHHHHH----CCCHHHHHHH----HHHHHHHHHHCCCCC--CCCC-CEEEEEEC
Q ss_conf 0--12110000135775025789887898862----7102247899----999999876417978--9989-72899958
Q gi|254780486|r 252 I--NYAKPFIYTTSPSPILAVVACEALKLIKR----KPALHKSLLQ----LINITDKIANKKIGF--SSQS-HIQSIVIG 318 (381)
Q Consensus 252 ~--~~~~~~ifst~l~P~~~aaa~aal~~l~~----~~~~~~~l~~----~~~~~~~~~~~~~g~--~~~s-~I~~v~~g 318 (381)
- -.+|+. ... +.+.+..++.+-. .|..-....+ .+..+++++..-.+. ...+ -|+.|.++
T Consensus 247 a~RLTaPGi-G~e------~Gat~~~~r~~~QGlFlAP~vv~eAlKga~~~A~~~e~lG~~v~P~~~~~R~DiIQav~l~ 319 (405)
T pfam06838 247 SYRLTAPGI-GRE------GGATLGSLREMYQGLFLAPHVVGEALKGAHFTARVLELLGFPVLPKYNEKRTDLIQAVKFG 319 (405)
T ss_pred HHHHCCCCC-CCC------CCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECC
T ss_conf 752068834-654------5768137899987860024999999999999999999849946899999877457888679
Q ss_pred CHHHHHHHHHHHHHCC
Q ss_conf 9799999999999779
Q gi|254780486|r 319 DNKSCLNIAKNLQKKG 334 (381)
Q Consensus 319 d~~~a~~~~~~L~~~G 334 (381)
++++...+++...+..
T Consensus 320 ~~e~liaFC~~iQ~~s 335 (405)
T pfam06838 320 DKEKLIAFCQAIQAAS 335 (405)
T ss_pred CHHHHHHHHHHHHHCC
T ss_conf 9899999999987259
No 318
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase; InterPro: IPR006238 This group of sequences represent cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys..
Probab=99.04 E-value=3.5e-07 Score=64.95 Aligned_cols=330 Identities=16% Similarity=0.163 Sum_probs=184.6
Q ss_pred CEEEECCC--CCCCCCCCCHHHHH-HHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC--CCEEEECCCCHHH
Q ss_conf 76898034--46566779889999-9999998637868872244368858999999998401288--8516741660245
Q gi|254780486|r 29 QDIWDFTS--HDYLALSSSTLLRE-KILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF--EKMLYFGSGYAAN 103 (381)
Q Consensus 29 ~~~l~f~s--~dYLGl~~~p~v~~-a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~--e~al~~~sG~~An 103 (381)
.++++|.+ ||=-+=+.-|--.- .+++-.....|-+.==|| +|| +.-..||+.||++.+. +.|+.|+||..|=
T Consensus 3 T~lV~~d~C~~D~y~A~s~PiYqtATFkq~~~~E~g~nYDYsR--SGN-PTR~~Le~~~AkL~~aPq~~al~~sSGMaAL 79 (415)
T TIGR01329 3 TELVNTDSCKNDPYDASSMPIYQTATFKQPLAEEDGPNYDYSR--SGN-PTRTALESLLAKLEKAPQERALAVSSGMAAL 79 (415)
T ss_pred CEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCC--CCC-HHHHHHHHHHHHHHCCCCCCEEEEECCHHHH
T ss_conf 1588667779887877058721210013136678888777346--898-0478999998865127535358886136799
Q ss_pred HHHHH--HHCCCCC----CCCH-HHHCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCC-CCC
Q ss_conf 65566--6316897----1004-54202677526664087640305688147899764310002478607971462-157
Q gi|254780486|r 104 MAILS--TLPQATD----LIVY-DKLVHASIREGINSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESI-YSM 175 (381)
Q Consensus 104 ~~~i~--~l~~~~d----~ii~-D~~~HaSi~~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv-~Sm 175 (381)
..++. .+.+++| .||. |-+.=.+=+-=-.+....-.+..|-|+.++|+.- +.-... +...+|..|+= ...
T Consensus 80 ~~~~~Glv~L~~GdnhtP~i~AgdDlYGG~~RLL~~~~~~~G~vv~~V~t~~~d~v~-~~l~~~-P~~~lv~LESPTNPl 157 (415)
T TIGR01329 80 DVITRGLVLLNAGDNHTPEIIAGDDLYGGTDRLLTQLASRSGVVVVHVDTTDLDKVK-AVLGDL-PKTKLVLLESPTNPL 157 (415)
T ss_pred HHHHHEEEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHH-HHHHCC-CHHEEEEECCCCCCC
T ss_conf 886411456607888677078437456504789999743285289974898879999-986068-712076503888986
Q ss_pred CCCHHHHHHHHHHHHHCC--EEEEECCCCCCCCCCCCCCEEEEEHHCC-CCCCCCCCCCCCCCC----EEEEEECCC-CC
Q ss_conf 661346899999863136--0898613112223477764011000013-465210013465653----026752451-00
Q gi|254780486|r 176 DGDKAPLDDLVKIANDYD--GFIVVDEAHATGVCGPLGKGLTHIIEER-NNVIVMHSCSKALGS----SGALVGSNK-II 247 (381)
Q Consensus 176 ~G~~apL~~i~~l~~~y~--~~LivDEah~~Gv~G~~G~G~~~~~~~~-~~~iv~~TlsKa~g~----~GG~i~~~~-~i 247 (381)
=-|.|+++|.+.+++.+ +.++||-.- +-+- .|.-+.+. .-||++.|=.|=+.+ ++|.++.+. ++
T Consensus 158 -~~ivDI~~i~~~ah~~~~~~~V~vDNtm----mSPl---~c~PL~LnPGaD~v~~SATKfL~GH~D~MaGvl~~k~e~~ 229 (415)
T TIGR01329 158 -IKIVDIRKIAEAAHALNEDALVVVDNTM----MSPL---LCNPLELNPGADIVYESATKFLAGHSDVMAGVLAVKSEEI 229 (415)
T ss_pred -CEEECHHHHHHHHHHCCCCCEEEEECCC----CCCC---CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEECCHHH
T ss_conf -2463378999999850897189982220----4766---7887566789757863534201464011335577737121
Q ss_pred CCC--CCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH-HHHHHHHHHHHH-------HHHH-----CCCCCC-----
Q ss_conf 100--00121100001357750257898878988627102-247899999999-------8764-----179789-----
Q gi|254780486|r 248 YDY--LINYAKPFIYTTSPSPILAVVACEALKLIKRKPAL-HKSLLQLINITD-------KIAN-----KKIGFS----- 307 (381)
Q Consensus 248 i~~--l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~-~~~l~~~~~~~~-------~~~~-----~~~g~~----- 307 (381)
.+. ..+++.+ .+|+|.-+.-.+..++.|.=+-+. ++..+.++.+++ +... ...|++
T Consensus 230 ~~~~yF~~Ns~G----~gLaP~DswLLlRGikTLaiR~ekQq~NA~~iA~fL~nsCGfkP~~~~v~~k~~Y~GL~PatsP 305 (415)
T TIGR01329 230 AKKVYFLINSTG----AGLAPFDSWLLLRGIKTLAIRLEKQQENAVAIALFLENSCGFKPTHSRVVSKVRYAGLKPATSP 305 (415)
T ss_pred HHHEEEEECCCC----CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCC
T ss_conf 000111233667----7665135899986688888879899999999999863216888668831047763888976775
Q ss_pred ------------------CCCCEEEEEECCHHHHHHHHHHHHH--CCEEEE--EE--------------CCCCCCC----
Q ss_conf ------------------9897289995897999999999997--791898--62--------------2888888----
Q gi|254780486|r 308 ------------------SQSHIQSIVIGDNKSCLNIAKNLQK--KGFDIR--AI--------------RPPTVPI---- 347 (381)
Q Consensus 308 ------------------~~s~I~~v~~gd~~~a~~~~~~L~~--~Gi~v~--~i--------------~~PtVp~---- 347 (381)
+...+.++.+|+-+....+.+..+= =+|-|+ ++ -+|-+-+
T Consensus 306 qissl~~p~f~LH~S~~~GaGsVLSfeTGsv~~S~~lV~a~Klsif~i~VSFGsvnSLisMPC~mSHASIdae~r~~R~l 385 (415)
T TIGR01329 306 QISSLSHPDFKLHKSQAKGAGSVLSFETGSVALSKRLVEAAKLSIFKITVSFGSVNSLISMPCLMSHASIDAEVREERDL 385 (415)
T ss_pred CCCCCCCCCCCCCCHHCCCCCEEEEEECCCHHHHHHHHHHHHHEEEEEEEEECCCHHHHCCCCCCCCCCCCHHHHHCCCC
T ss_conf 42236898731250211688517753327778989987763000235788212111111355534456688431110478
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 87039996287899999999999999998873
Q gi|254780486|r 348 NTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 348 ~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
-...||+|+.- |||+.+++=|.+.+.+-
T Consensus 386 peDLvRLs~GI----E~v~DL~~DL~~A~~~a 413 (415)
T TIGR01329 386 PEDLVRLSVGI----EDVEDLIKDLSAALVAA 413 (415)
T ss_pred CEEEEEEECCC----CCHHHHHHHHHHHHHHC
T ss_conf 61123453262----56688999999999851
No 319
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.01 E-value=6.8e-07 Score=63.12 Aligned_cols=324 Identities=16% Similarity=0.178 Sum_probs=178.8
Q ss_pred CCCCEEEECCCCCCCCCCCCH-HHHHHHHHHHHHHCCCCCCCCCC--CCCCCHHHHHHHHHHHHHCCCC--CEEEECCCC
Q ss_conf 289768980344656677988-99999999998637868872244--3688589999999984012888--516741660
Q gi|254780486|r 26 LRRQDIWDFTSHDYLALSSST-LLREKILSSLDSKIPIGSGGSRL--LCGNYNQHLELEEEAADFFGFE--KMLYFGSGY 100 (381)
Q Consensus 26 ~~~~~~l~f~s~dYLGl~~~p-~v~~a~~~a~~~~~g~~~~~sr~--~~G~~~~~~~lE~~lA~~~g~e--~al~~~sG~ 100 (381)
.....++-+++|+ ||. +| +..+..++.....|+-+.-.|-. -..-.++-+.|-.+||-+.|.- .+.++. ++
T Consensus 27 ~lp~~viyLdgnS-LGa--~p~~~~a~~~q~a~deW~~~lirsw~~a~~~W~~lp~~lgdklApLiGA~~~Evvv~d-tt 102 (407)
T COG3844 27 ALPGGVIYLDGNS-LGA--RPRAVTARLQQVATDEWGEGLIRSWNKAKADWFDLPERLGDKLAPLIGARAGEVVVTD-TT 102 (407)
T ss_pred CCCCCEEEEECCC-CCC--CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCHHHHHHHHHHHHCCCCCCEEEEC-CC
T ss_conf 5999838960642-346--8657799999999999874335432025886322536777776443168878469727-85
Q ss_pred HHHH--HHHHHHC-C-CCCCCCHHHHCCHH---HHHH-HHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCC
Q ss_conf 2456--5566631-6-89710045420267---7526-664087640305688147899764310002478607971462
Q gi|254780486|r 101 AANM--AILSTLP-Q-ATDLIVYDKLVHAS---IREG-INSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESI 172 (381)
Q Consensus 101 ~An~--~~i~~l~-~-~~d~ii~D~~~HaS---i~~g-~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv 172 (381)
..|+ .++.++- + ...+|+++..+-.+ +..| +++.+.....+---++.++++.+ .+...+|+.-+|
T Consensus 103 s~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P~~~~~~~-------~dd~AvV~L~~V 175 (407)
T COG3844 103 SINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAPRALEEAI-------TDDVAVVLLSHV 175 (407)
T ss_pred CHHHHHHHHHHHCCCCCCEEEEECCCCCCCCHHHHCCHHHHHCCCCCCEEEECHHHHHHHH-------CCCEEEEEECCC
T ss_conf 1679999999846678855996458888851343123666615654513432727788750-------465579984563
Q ss_pred CCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCC----CCEEEEEECCCCCC
Q ss_conf 15766134689999986313608986131122234777640110000134652100134656----53026752451001
Q gi|254780486|r 173 YSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKAL----GSSGALVGSNKIIY 248 (381)
Q Consensus 173 ~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~----g~~GG~i~~~~~ii 248 (381)
.--+|..-++.+|-++++++|++..-|=||+.|.+-- .+.....++-++.--|-+ |+.+| +...+...
T Consensus 176 ~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~-------~Lh~~gaDfaigcsyKYLNgGPGapa~-l~v~~~h~ 247 (407)
T COG3844 176 NYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPV-------DLHAAGADFAIGCSYKYLNGGPGAPAG-LFVAPRHR 247 (407)
T ss_pred CCCCCCEEEHHHHHHHHHHCCCEEEEEHHCCCCCCCE-------EECCCCCCEEEEEECEECCCCCCCCEE-EEECCCCC
T ss_conf 4443412238899998874586477620112577651-------103467874410100002579997206-88610224
Q ss_pred CCC--C-----CCCCCEE-------------CCCCCCCCH-HHHHHHHHHHHHHC--CCHHHHHHHHHHHHHHHHHCCC-
Q ss_conf 000--0-----1211000-------------013577502-57898878988627--1022478999999998764179-
Q gi|254780486|r 249 DYL--I-----NYAKPFI-------------YTTSPSPIL-AVVACEALKLIKRK--PALHKSLLQLINITDKIANKKI- 304 (381)
Q Consensus 249 ~~l--~-----~~~~~~i-------------fst~l~P~~-~aaa~aal~~l~~~--~~~~~~l~~~~~~~~~~~~~~~- 304 (381)
+-. . -++++|- |-.+.+|.. +++...+|++..+- .++|++-..+..++-++.....
T Consensus 248 e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLTd~fieLvEa~~~ 327 (407)
T COG3844 248 ERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALTDYFIELVEARCE 327 (407)
T ss_pred CCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 54445333435778850123203767651012207822656677740134655337899987656789999999884156
Q ss_pred --CCC---------CCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECC-CCCCHHHHHHHHHHH
Q ss_conf --789---------98972899958979999999999977918986228888888703999628-789999999999999
Q gi|254780486|r 305 --GFS---------SQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISIT-LNVDEPTIVKLFDIL 372 (381)
Q Consensus 305 --g~~---------~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~-a~~t~edi~~~~~~l 372 (381)
++. ..|+ +++.-+ .+..+.+.|-+||| +.-+|.|-| |||-++ ...+-+|+-..+++|
T Consensus 328 ~~~l~l~tPr~~~~rGsq-vS~~hp---~~~~V~qaLi~rGV-igD~R~P~v------lRfgftPlY~~~~DVw~AV~~L 396 (407)
T COG3844 328 YYGLTLVTPRAHEERGSQ-VSLYHP---HGYQVMQALIDRGV-IGDFREPDV------LRFGFTPLYVSFVDVWDAVDAL 396 (407)
T ss_pred CCCCEEECCCHHHHCCCE-EEEECC---CHHHHHHHHHHCCC-CCCCCCCCE------EEECCCCCEECHHHHHHHHHHH
T ss_conf 677178466135433660-357368---68999999997384-133568873------5642753111165899999999
Q ss_pred HHHHHHH
Q ss_conf 9998873
Q gi|254780486|r 373 PQIISEG 379 (381)
Q Consensus 373 ~~v~~E~ 379 (381)
.++++++
T Consensus 397 ~evL~t~ 403 (407)
T COG3844 397 EEVLDTL 403 (407)
T ss_pred HHHHHHH
T ss_conf 9999752
No 320
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.99 E-value=1.7e-06 Score=60.59 Aligned_cols=354 Identities=16% Similarity=0.177 Sum_probs=196.6
Q ss_pred HHHHHHHHHHHHHCCCEEEECCC-CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 78999999999975983999289-76898034465667798899999999998637868872244368858999999998
Q gi|254780486|r 6 MSFYEERLQKIKSKGRHRQLLRR-QDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEA 84 (381)
Q Consensus 6 ~~~~~~~l~~~~~~g~~~~~~~~-~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~l 84 (381)
+.--+.|...++..|..--+.+- .-++|+-+-+ ..-++.+....++. +---..+|||-+ ..|....
T Consensus 22 ~ttre~RE~al~~ag~N~F~l~Sedv~IDLLTDS-----GTgams~~qwaamm-~GDEAYagsrs~-------~~L~~av 88 (471)
T COG3033 22 RTTREYREEALKKAGYNPFLLDSEDVFIDLLTDS-----GTGAMTDKQWAAMM-RGDEAYAGSRSY-------YALADAV 88 (471)
T ss_pred CCCHHHHHHHHHHCCCCEEECCCCCEEEEEECCC-----CCCCCCHHHHHHHH-CCCHHHCCCCCH-------HHHHHHH
T ss_conf 0579999999997699805515564578853058-----86625389999885-253543155338-------9999999
Q ss_pred HHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCH-----HHHCCHH------HHHHHH--------HCCCC-CEEECCC
Q ss_conf 40128885167416602456556663168971004-----5420267------752666--------40876-4030568
Q gi|254780486|r 85 ADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVY-----DKLVHAS------IREGIN--------SGKAQ-AIAIPHN 144 (381)
Q Consensus 85 A~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~-----D~~~HaS------i~~g~~--------ls~a~-~~~f~Hn 144 (381)
-+.+|.+..+-..-|-.|-.-+++.+.++++.+-. -.+.|.- -++|+- ..... ..+|+-|
T Consensus 89 kdifGfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~h~~~ng~~~~n~~~~ea~d~~~~~pFKGd 168 (471)
T COG3033 89 KDIFGFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRGHIQINGATPRNVYVDEAFDTEVKYPFKGN 168 (471)
T ss_pred HHHCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEECCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98617346512557731777889998410320677410123453120226778754870212316655664556887786
Q ss_pred -CHHHHHHHHHHHHHCCCCCCCEE-EECCCCCCCC---CHHHHHHHHHHHHHCCEEEEECCCCCC-C--CCCCCCCEEEE
Q ss_conf -81478997643100024786079-7146215766---134689999986313608986131122-2--34777640110
Q gi|254780486|r 145 -NINSFAENINKWRKSGGKGFPWI-VVESIYSMDG---DKAPLDDLVKIANDYDGFIVVDEAHAT-G--VCGPLGKGLTH 216 (381)
Q Consensus 145 -D~~~Le~~l~~~~~~~~~~~~~v-v~egv~Sm~G---~~apL~~i~~l~~~y~~~LivDEah~~-G--v~G~~G~G~~~ 216 (381)
|++.||+++++.-.. +.+.| .+=...|+.| +++++++..+||++|+..+++|-+--. - ++-.+-.|+-+
T Consensus 169 ~D~~kLe~lidevG~~---nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENaYFIk~rE~gYrd 245 (471)
T COG3033 169 FDLEKLERLIDEVGAD---NVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENAYFIKQREPGYRD 245 (471)
T ss_pred CCHHHHHHHHHHHCCC---CCCEEEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCC
T ss_conf 5799999999873714---5868999996266678712077699999999871995896445665420223424765554
Q ss_pred E---------HHCCCCCCCCCCCCC-CCCCEEEEEECCCC----CCCCCCC-----CC-CCEECCCCCCCCHHHHHHHHH
Q ss_conf 0---------001346521001346-56530267524510----0100001-----21-100001357750257898878
Q gi|254780486|r 217 I---------IEERNNVIVMHSCSK-ALGSSGALVGSNKI----IYDYLIN-----YA-KPFIYTTSPSPILAVVACEAL 276 (381)
Q Consensus 217 ~---------~~~~~~~iv~~TlsK-a~g~~GG~i~~~~~----ii~~l~~-----~~-~~~ifst~l~P~~~aaa~aal 276 (381)
. +.. .+-..| |.-| ++.-+|||++-+.+ +-+.++. .+ ++| ++|+--.+.+....|
T Consensus 246 ~sI~~IarEm~sY-aD~~~m-S~KKD~lvnmGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tY---Ggl~GrdmealAvGL 320 (471)
T COG3033 246 WSIEEIAREMYSY-ADGCTM-SAKKDGLVNMGGFLCFKDDSFFDVYEECRTLVVVQEGFPTY---GGLAGRDMEALAVGL 320 (471)
T ss_pred CCHHHHHHHHHHH-HHHHEE-ECCCCCEECCCCEEEECCCCHHHHHHHHHHHEEEECCCCCC---CCCCCHHHHHHHHHH
T ss_conf 6099999999865-124302-02545242246578864750778999987665751266665---764423289999788
Q ss_pred HHHHHCCCHHHHHHHHHHHHHHHHHCCCCC--CCCCCEEEEEEC--------CHHHHHHHHHHHH-HCCEEEEEE-----
Q ss_conf 988627102247899999999876417978--998972899958--------9799999999999-779189862-----
Q gi|254780486|r 277 KLIKRKPALHKSLLQLINITDKIANKKIGF--SSQSHIQSIVIG--------DNKSCLNIAKNLQ-KKGFDIRAI----- 340 (381)
Q Consensus 277 ~~l~~~~~~~~~l~~~~~~~~~~~~~~~g~--~~~s~I~~v~~g--------d~~~a~~~~~~L~-~~Gi~v~~i----- 340 (381)
.---+.++++.+..+...+-+.+...+.++ +...+-+.|-.+ +.-.+..++-+|. +.||.+.-+
T Consensus 321 ~e~~~~~yl~~Rv~Qv~YL~~~l~~~GVpi~~paGGHavfvda~~~lphip~eqFpaqala~ely~e~GiRavElG~~~~ 400 (471)
T COG3033 321 REGVNFDYLAHRVAQVQYLADGLEEAGVPIVQPAGGHAVFVDAGKFLPHIPAEQFPAQALACELYKEAGIRAVELGSFSL 400 (471)
T ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEHHHHCCCCCHHHCCHHHHHHHHHHHHCEEEEEEECEEC
T ss_conf 87427089999999999999888865973685278716996345636778824484778999999983823664201111
Q ss_pred -CCCCCCCCC----CEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf -288888887----0399962-878999999999999999988738
Q gi|254780486|r 341 -RPPTVPINT----ARLRISI-TLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 341 -~~PtVp~~~----~rlRi~v-~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
+-|-+++.. ..+|+++ .+.-|.+.+|..+++++.+.++..
T Consensus 401 ~rd~ktg~q~~~~~elvRltipRrtYt~~HmD~V~~a~~~l~e~~~ 446 (471)
T COG3033 401 GRDPKTGKQHPPPAELVRLTIPRRTYTQTHMDFVIEAFKALKENAE 446 (471)
T ss_pred CCCCCCCCCCCCCHHEEEEECCCCCCCHHHHHHHHHHHHHHHHCCC
T ss_conf 5587764347871230467435111456679999999999985424
No 321
>TIGR00461 gcvP glycine dehydrogenase; InterPro: IPR003437 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T . The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0006544 glycine metabolic process, 0005961 glycine dehydrogenase complex (decarboxylating).
Probab=98.96 E-value=3.9e-09 Score=77.12 Aligned_cols=287 Identities=17% Similarity=0.240 Sum_probs=164.0
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCCCEEEE-CCCCHHHH---HHHHHHC-----CCCCCCCHHHHCC----HHHHHHHHHCC
Q ss_conf 4368858999999998401288851674-16602456---5566631-----6897100454202----67752666408
Q gi|254780486|r 69 LLCGNYNQHLELEEEAADFFGFEKMLYF-GSGYAANM---AILSTLP-----QATDLIVYDKLVH----ASIREGINSGK 135 (381)
Q Consensus 69 ~~~G~~~~~~~lE~~lA~~~g~e~al~~-~sG~~An~---~~i~~l~-----~~~d~ii~D~~~H----aSi~~g~~ls~ 135 (381)
=.-||..+..+||+-|.++.|+++.-+- |||.+.-= -+|..+- +..|+.++-+.+| || +.++|
T Consensus 545 Q~eGY~~lia~Le~wL~~iTGfDaislQPNsGaQGEYaGL~vIR~YheSrgE~hRniCLIP~SAHGTNPAS----A~MaG 620 (965)
T TIGR00461 545 QVEGYQELIAQLEKWLVEITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGEEHRNICLIPVSAHGTNPAS----AAMAG 620 (965)
T ss_pred HHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCHHH----HHHCC
T ss_conf 22589999999988752105766244178888446678899999987605889874453077767887289----96169
Q ss_pred CCCEEEC-----CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCH-HHHHHHHHHHHHCCEEEEECCCC---CCCC
Q ss_conf 7640305-----6881478997643100024786079714621576613-46899999863136089861311---2223
Q gi|254780486|r 136 AQAIAIP-----HNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDK-APLDDLVKIANDYDGFIVVDEAH---ATGV 206 (381)
Q Consensus 136 a~~~~f~-----HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~-apL~~i~~l~~~y~~~LivDEah---~~Gv 206 (381)
=++++++ .-|+.||+.+-+++- +.-..|.+= =-|+.|-+ +-+.+++++-+++|.-+++|-|- -+|+
T Consensus 621 m~VVpV~Cd~~GniDl~DL~~KAEq~g----d~Laa~MvT-YPSThGvfE~tI~~~~diVH~FGGqVYlDGANMNAQVGl 695 (965)
T TIGR00461 621 MQVVPVKCDKDGNIDLVDLKAKAEQYG----DELAAVMVT-YPSTHGVFEETIREVCDIVHRFGGQVYLDGANMNAQVGL 695 (965)
T ss_pred CEEEEEEECCCCCEEHHHHHHHHHHCC----CCEEEEEEE-CCCCCCCCHHHHCCEEEEEECCCCEEEECCCCCCCCCCC
T ss_conf 868987656999500777788887506----652567750-587766432221001311442688475245664223366
Q ss_pred CC--CCCCEEEEEHHCCCCCCCCCCCCCCCCC---EE----EEEECCCCCCCCC---------CCCC-CCEECCCCCCCC
Q ss_conf 47--7764011000013465210013465653---02----6752451001000---------0121-100001357750
Q gi|254780486|r 207 CG--PLGKGLTHIIEERNNVIVMHSCSKALGS---SG----ALVGSNKIIYDYL---------INYA-KPFIYTTSPSPI 267 (381)
Q Consensus 207 ~G--~~G~G~~~~~~~~~~~iv~~TlsKa~g~---~G----G~i~~~~~ii~~l---------~~~~-~~~ifst~l~P~ 267 (381)
.- .-|.-+|| --|-|.|+. .| |=|.-.+-++-+| .-.+ ...+.+-|-.|.
T Consensus 696 tsPgd~GADVcH-----------LNLHKTFcIPHGGGGPgmgPIgVKsHL~pflP~~~~~s~~~~~g~~~sig~vSaAPy 764 (965)
T TIGR00461 696 TSPGDLGADVCH-----------LNLHKTFCIPHGGGGPGMGPIGVKSHLIPFLPKTDVVSVVELEGESKSIGAVSAAPY 764 (965)
T ss_pred CCCCCCCCCHHH-----------HHCCCCEECCCCCCCCCCCCHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCEECCCC
T ss_conf 786110563434-----------305442012686787877522246402245888760001565312324354523654
Q ss_pred HHHHHH---HH-HHHHHHCCCHHHH---HHHHHHHHH-HHHHCCCC--CC----CCC---CEEEEEEC-----CHHHHHH
Q ss_conf 257898---87-8988627102247---899999999-87641797--89----989---72899958-----9799999
Q gi|254780486|r 268 LAVVAC---EA-LKLIKRKPALHKS---LLQLINITD-KIANKKIG--FS----SQS---HIQSIVIG-----DNKSCLN 325 (381)
Q Consensus 268 ~~aaa~---aa-l~~l~~~~~~~~~---l~~~~~~~~-~~~~~~~g--~~----~~s---~I~~v~~g-----d~~~a~~ 325 (381)
-.|.++ .. ++++- .+.+.+. ..-+++|.. |+.. ... |. ... |=.=+-+. ..-...+
T Consensus 765 GsAsiLpISw~YI~MMG-~eGL~kas~vAiLnaNYma~RL~d-~ypiLf~nemg~~~~vAHEcIlDlRplK~~~gie~~D 842 (965)
T TIGR00461 765 GSASILPISWMYIKMMG-AEGLKKASEVAILNANYMAKRLKD-YYPILFVNEMGRDKRVAHECILDLRPLKKKAGIEALD 842 (965)
T ss_pred CCHHHHHHHHHHHHHHC-CCCCHHHHHHHHHHHHHHHHHHHH-CCCEEEEECCCCCCCEEEEEEECHHHHHHHHCCCHHH
T ss_conf 54146688999998522-013503557775626689988761-0765443115788831356763525545651765445
Q ss_pred HHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 99999977918986228888888703999628789999999999999999887387
Q gi|254780486|r 326 IAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGNS 381 (381)
Q Consensus 326 ~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~s 381 (381)
++++|++-||.+.-+.||+. |+ |=|=||=.-+.+|+|||+|++-.+..|.|.
T Consensus 843 vAKRL~DyGFHAPT~sfPV~--GT--lMvEPTESEsl~ELDRF~DAMiaI~~Ei~a 894 (965)
T TIGR00461 843 VAKRLIDYGFHAPTLSFPVA--GT--LMVEPTESESLEELDRFCDAMIAIKEEIDA 894 (965)
T ss_pred HHHHHHCCCCCCCCCCCCCC--CC--CCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 67664115776533233678--74--200554656631245888899999999999
No 322
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=98.85 E-value=3.8e-06 Score=58.43 Aligned_cols=191 Identities=18% Similarity=0.182 Sum_probs=111.1
Q ss_pred HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHH-CCCCCCCCCCCCCC-C-CCEEEEEECCCCCCCCCCCCCCC-
Q ss_conf 89999986313608986131122234777640110000-13465210013465-6-53026752451001000012110-
Q gi|254780486|r 182 LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIE-ERNNVIVMHSCSKA-L-GSSGALVGSNKIIYDYLINYAKP- 257 (381)
Q Consensus 182 L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~-~~~~~iv~~TlsKa-~-g~~GG~i~~~~~ii~~l~~~~~~- 257 (381)
+.++.+|+++||+-|++|.|++.-+=| --..+... -.+++|.+.||||. + |+.-|.+.++..++..+.+...-
T Consensus 201 ~~kldalA~~~giPliIDnAYg~PFP~---iifsd~~~~w~~NiilC~SLSK~GLPG~R~GIiIane~viqaitnmn~ii 277 (417)
T COG3977 201 LAKLDALARQHGIPLIIDNAYGVPFPG---IIFSDATPLWNENIILCMSLSKLGLPGSRCGIIIANEKVIQAITNMNGII 277 (417)
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCC---EECCCCCCCCCCCEEEEEEHHHCCCCCCEEEEEECCHHHHHHHHHCCCEE
T ss_conf 998998742238967973566799786---20035641567877888314334898730357962699999997114535
Q ss_pred EECCCCCCCCHHHHHHHHHHHHHHC-----CCHHHHHHHHHHHHHHHHHCCCCC---CCCCCEEE-EEECC-HHHHHHHH
Q ss_conf 0001357750257898878988627-----102247899999999876417978---99897289-99589-79999999
Q gi|254780486|r 258 FIYTTSPSPILAVVACEALKLIKRK-----PALHKSLLQLINITDKIANKKIGF---SSQSHIQS-IVIGD-NKSCLNIA 327 (381)
Q Consensus 258 ~ifst~l~P~~~aaa~aal~~l~~~-----~~~~~~l~~~~~~~~~~~~~~~g~---~~~s~I~~-v~~gd-~~~a~~~~ 327 (381)
..-++.+-|+.++-.+++=++++-. |--+++.+..+...++... .... ..+..|.. +++.| +-...+++
T Consensus 278 sLap~~~G~Aiaa~mie~gdl~rlseqVIrPFY~~~~q~~~~~l~~~lp-~~~~~iHkpEGAIFlWLWf~dLPItt~~LY 356 (417)
T COG3977 278 SLAPGRMGPAIAAEMIESGDLLRLSEQVIRPFYRNRVQTTIAILRRYLP-EYRCLIHKPEGAIFLWLWFKDLPITTEELY 356 (417)
T ss_pred EECCCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CCCEEEECCCCCEEEHHHHCCCCCCHHHHH
T ss_conf 3167875689999886024288899986438889889999999998657-765254268751541335535876689999
Q ss_pred HHHHHCCEEEEEEC--CCC----CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99997791898622--888----8888703999628789999999999999999887
Q gi|254780486|r 328 KNLQKKGFDIRAIR--PPT----VPINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 328 ~~L~~~Gi~v~~i~--~Pt----Vp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
++|.++|+++.|-. ||. .|....++|+.... .++.|++-+.+|.+.+..
T Consensus 357 q~LKa~Gvl~VPG~~FFpGl~~ewpH~hqC~Rmn~~~--~~e~ie~Gva~lae~ve~ 411 (417)
T COG3977 357 QRLKARGVLMVPGHYFFPGLDKEWPHTHQCMRMNYVP--EPEKIEKGVAILAEEVER 411 (417)
T ss_pred HHHHHCEEEEECCCCCCCCCCCCCCCCCCEEEEECCC--CHHHHHHHHHHHHHHHHH
T ss_conf 9998686899446324789998887612247875369--879999999999999999
No 323
>KOG2040 consensus
Probab=98.85 E-value=8.8e-07 Score=62.43 Aligned_cols=289 Identities=18% Similarity=0.254 Sum_probs=159.3
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCEEEEC-CCCHH---HHHHHHHHC-CCC----CCCCHHHHCCHHHHHHHHHCCCCCEEE
Q ss_conf 688589999999984012888516741-66024---565566631-689----710045420267752666408764030
Q gi|254780486|r 71 CGNYNQHLELEEEAADFFGFEKMLYFG-SGYAA---NMAILSTLP-QAT----DLIVYDKLVHASIREGINSGKAQAIAI 141 (381)
Q Consensus 71 ~G~~~~~~~lE~~lA~~~g~e~al~~~-sG~~A---n~~~i~~l~-~~~----d~ii~D~~~HaSi~~g~~ls~a~~~~f 141 (381)
-|+..++.+||+-|++..|++..-+-| ||... .+.+|.++- .++ .+.++-..+|..=--.+.+++-+++++
T Consensus 578 qGY~~lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNPASA~MagmkvvpV 657 (1001)
T KOG2040 578 QGYQQLFTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNPASAAMAGMKVVPV 657 (1001)
T ss_pred HHHHHHHHHHHHHHHEEECCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCHHHHHHCCCEEEEE
T ss_conf 64999999998777632066613426898755311229999999985477765168986024689846688649868886
Q ss_pred C-----CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCH-HHHHHHHHHHHHCCEEEEECCCCC---CCCC--CCC
Q ss_conf 5-----6881478997643100024786079714621576613-468999998631360898613112---2234--777
Q gi|254780486|r 142 P-----HNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDK-APLDDLVKIANDYDGFIVVDEAHA---TGVC--GPL 210 (381)
Q Consensus 142 ~-----HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~-apL~~i~~l~~~y~~~LivDEah~---~Gv~--G~~ 210 (381)
. .-|+.||..+..++...-. .+.|+= -|.-|-+ ..+++++++-.+||..+++|-|.= .|.+ |.-
T Consensus 658 ~~~~~G~id~~dLk~kaekh~~~La---a~MvTY--PST~GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~ 732 (1001)
T KOG2040 658 GCDANGNIDMVDLKAKAEKHKDNLA---ALMVTY--PSTHGVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDI 732 (1001)
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHH---EEEEEC--CCCCCCCCCCHHHHHHHHHHCCCEEEECCCCCCCEECCCCCCCC
T ss_conf 3157887459999999997465220---467854--66456655458999999986398788537775230253577656
Q ss_pred CCEEEEEHHCCCCCCCCCCCCCCCCC----EE---EEEECCCCCCCCCCCCC---------CCEECCCCCCCCHHHHHH-
Q ss_conf 64011000013465210013465653----02---67524510010000121---------100001357750257898-
Q gi|254780486|r 211 GKGLTHIIEERNNVIVMHSCSKALGS----SG---ALVGSNKIIYDYLINYA---------KPFIYTTSPSPILAVVAC- 273 (381)
Q Consensus 211 G~G~~~~~~~~~~~iv~~TlsKa~g~----~G---G~i~~~~~ii~~l~~~~---------~~~ifst~l~P~~~aaa~- 273 (381)
|.-+|+ -.|-|.|+. .| |=|.-.+.++.+|-.+. ..-+.|-+..|.-.+.++
T Consensus 733 GaDV~H-----------LNLHKTFcIPHGGGGPg~gPIgVK~HLapfLP~HpVvs~~~~~~~~~~gsVsaaP~Gsa~ILp 801 (1001)
T KOG2040 733 GADVCH-----------LNLHKTFCIPHGGGGPGMGPIGVKKHLAPFLPSHPVVSPGRPEDTSPVGSVSAAPWGSALILP 801 (1001)
T ss_pred CCCCCC-----------CCCCCEEEECCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCEEEH
T ss_conf 653100-----------013403550578988887752066543553799974577777788876604126777622203
Q ss_pred --HH-HHHHHHCCCHHH---HHHHHHHHHHHHHHCCC--CCC-CCCCEE--E-EEEC-----CHHHHHHHHHHHHHCCEE
Q ss_conf --87-898862710224---78999999998764179--789-989728--9-9958-----979999999999977918
Q gi|254780486|r 274 --EA-LKLIKRKPALHK---SLLQLINITDKIANKKI--GFS-SQSHIQ--S-IVIG-----DNKSCLNIAKNLQKKGFD 336 (381)
Q Consensus 274 --aa-l~~l~~~~~~~~---~l~~~~~~~~~~~~~~~--g~~-~~s~I~--~-v~~g-----d~~~a~~~~~~L~~~Gi~ 336 (381)
.+ ++++- ...+++ ...-|++|..+...... -|. ..+.+- + +-+. ..-.+.+++++|++.||.
T Consensus 802 ISwaYikmMG-~~GL~~as~~AiLNaNYMakRLe~hYkil~~~~~~~vaHEFIlD~r~fK~~agieavDvAKRL~DYgFH 880 (1001)
T KOG2040 802 ISWAYIKMMG-SGGLKDASKIAILNANYMAKRLESHYKILFRGENGLVAHEFILDLRPFKKTAGIEAVDVAKRLMDYGFH 880 (1001)
T ss_pred HHHHHHHHHC-CCCCCHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEEECHHHCCCCCCCHHHHHHHHHHCCCC
T ss_conf 3799999864-356433568886512789998864052147557764320001113422002697488899988752677
Q ss_pred EEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 98622888888870399962878999999999999999988738
Q gi|254780486|r 337 IRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 337 v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
..-..+|.- |+ |=|-+|-..+++|+|++++++..+..|..
T Consensus 881 aPTmswPV~--gt--LMIEPTESE~k~ElDRfcdAliSIreEI~ 920 (1001)
T KOG2040 881 APTMSWPVA--GT--LMIEPTESEDKAELDRFCDALISIREEIA 920 (1001)
T ss_pred CCCCCCCCC--CC--EEECCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 875556557--81--57326764468999999999998999999
No 324
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=98.77 E-value=4.4e-07 Score=64.27 Aligned_cols=238 Identities=17% Similarity=0.207 Sum_probs=134.1
Q ss_pred CCCCHHHHH-HHHHHHHHCCCCCEEEEC---CCCHHHHHHHHHHCCCCCCCCH------HHHCCHHHHHHHHHCCC-C--
Q ss_conf 688589999-999984012888516741---6602456556663168971004------54202677526664087-6--
Q gi|254780486|r 71 CGNYNQHLE-LEEEAADFFGFEKMLYFG---SGYAANMAILSTLPQATDLIVY------DKLVHASIREGINSGKA-Q-- 137 (381)
Q Consensus 71 ~G~~~~~~~-lE~~lA~~~g~e~al~~~---sG~~An~~~i~~l~~~~d~ii~------D~~~HaSi~~g~~ls~a-~-- 137 (381)
+|+.++=++ ||+-.|+.||.|+|++-| ||++|-.+++..+.+|+|..++ |-+-. +-|++-.+. .
T Consensus 60 YGydD~GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLee---vIG~rg~~~gSL~ 136 (416)
T COG4100 60 YGYDDLGRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEE---VIGLRGEGQGSLK 136 (416)
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHCCCCCCEEEEECCCCCHHHHH---HHCCCCCCCCCHH
T ss_conf 7765322667999999985541002310552360299999984268887477752886056898---7562777854278
Q ss_pred --CEEECC--------CCHHHHHHHHHHHHHCCCCCCCEEEEC-C-CCCCCC--CHHHHHHHHHHHHHC--CEEEEECCC
Q ss_conf --403056--------881478997643100024786079714-6-215766--134689999986313--608986131
Q gi|254780486|r 138 --AIAIPH--------NNINSFAENINKWRKSGGKGFPWIVVE-S-IYSMDG--DKAPLDDLVKIANDY--DGFIVVDEA 201 (381)
Q Consensus 138 --~~~f~H--------nD~~~Le~~l~~~~~~~~~~~~~vv~e-g-v~Sm~G--~~apL~~i~~l~~~y--~~~LivDEa 201 (381)
-+.|+- -|++.+...++. .+.+|.+- + =|+-.- .++.++++....++- +.+.+||..
T Consensus 137 dfgi~Y~~v~Lt~~gkiD~~~v~~~i~~-------~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNC 209 (416)
T COG4100 137 DFGIKYKAVPLTADGKIDIQAVKTAISD-------RTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNC 209 (416)
T ss_pred HHCCCEEECCCCCCCCCCHHHHHHHCCC-------CCEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECC
T ss_conf 7385500213566882338999875085-------525999973257677886429999999999984499779998056
Q ss_pred CCCCCCCCCCCEEEEEHHCC--CCCCCCCCCCCCCCC----EEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHH
Q ss_conf 12223477764011000013--465210013465653----026752451001000012110000135775025789887
Q gi|254780486|r 202 HATGVCGPLGKGLTHIIEER--NNVIVMHSCSKALGS----SGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEA 275 (381)
Q Consensus 202 h~~Gv~G~~G~G~~~~~~~~--~~~iv~~TlsKa~g~----~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aa 275 (381)
++ +. .|..... ..+++.|||=|--|. .|||++|++++++.--. .-|.+.----+.+.+.+
T Consensus 210 YG-----EF----vE~~EPt~vGaDliAGSLIKNpGGgiaktGGYiaGk~~~ve~~~y-----RlTaPGIG~e~Gat~~~ 275 (416)
T COG4100 210 YG-----EF----VEEKEPTHVGADLIAGSLIKNPGGGIAKTGGYIAGKAELVEAAAY-----RLTAPGIGREGGATLYS 275 (416)
T ss_pred CH-----HH----HHCCCCCCCCHHHHCCCEEECCCCCEEECCCEEECHHHHHHHHCE-----EEECCCCCCCCCCCHHH
T ss_conf 36-----55----411486300533420321327998665116455246889876412-----54268766433401889
Q ss_pred HHHHHHC----CCHHHHHHHHHHHHHHHHHCCCCCCC--------CCCEEEEEECCHHHHHHHHHHHHHC
Q ss_conf 8988627----10224789999999987641797899--------8972899958979999999999977
Q gi|254780486|r 276 LKLIKRK----PALHKSLLQLINITDKIANKKIGFSS--------QSHIQSIVIGDNKSCLNIAKNLQKK 333 (381)
Q Consensus 276 l~~l~~~----~~~~~~l~~~~~~~~~~~~~~~g~~~--------~s~I~~v~~gd~~~a~~~~~~L~~~ 333 (381)
+..+=.. |.......+-.. +......++|++. .--|..|.+++.++...+++.+...
T Consensus 276 l~~myqGlFlAPhvv~qa~Kga~-fta~~le~lg~~~~P~~~~kRtDlIQavkf~~~eKmIaFcqaiQ~a 344 (416)
T COG4100 276 LREMYQGLFLAPHVVSQAVKGAH-FTARFLEKLGFPVNPKYDAKRTDLIQAVKFGSKEKMIAFCQAIQAA 344 (416)
T ss_pred HHHHHHHHCCCHHHHHHHHHHHH-HHHHHHHHCCCCCCCCCCCCCCCHHHHEECCCHHHHHHHHHHHHHC
T ss_conf 99997352125388898861348-8999999819988976566432155510059889999999987404
No 325
>TIGR02617 tnaA_trp_ase tryptophanase; InterPro: IPR013440 Proteins in this entry belong to the beta-eliminating lyase family and are thought to act as tryptophanases (4.1.99.1 from EC) (also known as L-tryptophan indole-lyases). The genes encoding these proteins are, as a rule, found with a tryptophanase leader peptide TnaC (IPR013439 from INTERPRO) encoded upstream. ; GO: 0009034 tryptophanase activity, 0006568 tryptophan metabolic process.
Probab=98.75 E-value=1.9e-06 Score=60.29 Aligned_cols=344 Identities=18% Similarity=0.233 Sum_probs=198.6
Q ss_pred HHHHHHHHHCCCEEEECCCC-EEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 99999999759839992897-68980344656677988999999999986378688722443688589999999984012
Q gi|254780486|r 10 EERLQKIKSKGRHRQLLRRQ-DIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF 88 (381)
Q Consensus 10 ~~~l~~~~~~g~~~~~~~~~-~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~ 88 (381)
+.|=+++..+|-.=-+.|-. =++|+-+ =+.--++.+..+.++. +---..+|||-.+ .|-+.+-+++
T Consensus 21 ~~RE~A~~~aG~NPFLL~S~~VfIDLLT-----DSGTGA~~~~~~Aa~~-~GDEAY~GSR~Yy-------~La~~V~~~~ 87 (468)
T TIGR02617 21 AYREKAILEAGMNPFLLDSEDVFIDLLT-----DSGTGAVTQRMQAAMM-RGDEAYSGSRSYY-------ALADKVKEIF 87 (468)
T ss_pred HHHHHHHHHCCCCCCCCCCCCEEEEEEC-----CCCCCCCCHHHHHHHH-CCCCCCCCCHHHH-------HHHHHHHHHC
T ss_conf 8899999957898753770011343112-----6885310546677642-3641021323589-------9999976642
Q ss_pred CCCCEEEECCCCHHHHHHHHHHCCCCC----------CCC----HHHH-CCHHHHHHHHHCC---------CCCEEECCC
Q ss_conf 888516741660245655666316897----------100----4542-0267752666408---------764030568
Q gi|254780486|r 89 GFEKMLYFGSGYAANMAILSTLPQATD----------LIV----YDKL-VHASIREGINSGK---------AQAIAIPHN 144 (381)
Q Consensus 89 g~e~al~~~sG~~An~~~i~~l~~~~d----------~ii----~D~~-~HaSi~~g~~ls~---------a~~~~f~Hn 144 (381)
|.+-++-..-|-.|-+-.||+|..+.. +.+ .|-- .|.. ++|+...- +...-||-|
T Consensus 88 GY~YTIPTHQGRGAEQI~~P~LI~~~~~~~G~~~~kmV~~SNyfFDTT~~H~~-~Ng~~a~NV~~~~AFDT~~~~DfKG~ 166 (468)
T TIGR02617 88 GYQYTIPTHQGRGAEQIYIPVLIKKREAEKGLDRSKMVALSNYFFDTTQGHVQ-INGCKAKNVYTSEAFDTGVKYDFKGN 166 (468)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHH-HCCCEEEEEEEECCCCCCEECCCCCC
T ss_conf 73113687578860445665788877662589855278873232011134443-13523788775202234320133567
Q ss_pred -CHHHHHHHHHHHHHCCCCCCCEEEECCC--CCCCC---CHHHHHHHHHHHHHCCEEEEECCCC----CCCCCCCCCCEE
Q ss_conf -8147899764310002478607971462--15766---1346899999863136089861311----222347776401
Q gi|254780486|r 145 -NINSFAENINKWRKSGGKGFPWIVVESI--YSMDG---DKAPLDDLVKIANDYDGFIVVDEAH----ATGVCGPLGKGL 214 (381)
Q Consensus 145 -D~~~Le~~l~~~~~~~~~~~~~vv~egv--~Sm~G---~~apL~~i~~l~~~y~~~LivDEah----~~Gv~G~~G~G~ 214 (381)
|++.||+.+.++-. .+-+.| +-.| .|..| ++|+||++-+|+++|+.-+++|-|- +. ++-.+-+++
T Consensus 167 FDl~~LE~~I~E~G~---~NV~~I-v~TiTcNSaGGQPvSlANlKAvY~IAk~yDIPVv~DSARFaENAy-FIkQRE~~Y 241 (468)
T TIGR02617 167 FDLEELEKTIAEAGP---DNVPYI-VTTITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFAENAY-FIKQREKEY 241 (468)
T ss_pred CCHHHHHHHHHCCCC---CCCEEE-EEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCEEECCHHHHHHHH-HHHHHHHHH
T ss_conf 577888788750285---663277-775431689684267888899999986459986862302233457-777533000
Q ss_pred EEEHH-------C-CCCCCCCCCCCC-CCCCEEEEEECCCC-CCCCCCCCCCCEE-----CC--CCCCCCHHHHHHHHHH
Q ss_conf 10000-------1-346521001346-56530267524510-0100001211000-----01--3577502578988789
Q gi|254780486|r 215 THIIE-------E-RNNVIVMHSCSK-ALGSSGALVGSNKI-IYDYLINYAKPFI-----YT--TSPSPILAVVACEALK 277 (381)
Q Consensus 215 ~~~~~-------~-~~~~iv~~TlsK-a~g~~GG~i~~~~~-ii~~l~~~~~~~i-----fs--t~l~P~~~aaa~aal~ 277 (381)
-+..- . ..+.+-|. =-| ++=-.||.++-..+ +-|.. +-.|+.+ |- ++|. ..+.++|.
T Consensus 242 ~~~si~~I~~E~Y~YaD~L~MS-AKKD~~V~~GGL~C~~Ddsf~D~y-~E~RT~CV~~EGF~TYGGL~----G~~ME~LA 315 (468)
T TIGR02617 242 ENWSIEQITREMYKYADMLAMS-AKKDALVNMGGLLCFKDDSFFDVY-TEVRTLCVVQEGFPTYGGLE----GGAMERLA 315 (468)
T ss_pred CCCCHHHHHHHHHHHCCHHHHH-HCCCCCCCCCCEEEECCCCHHHHH-HCCCCEEECCCCCCCCCCCC----CHHHHHHH
T ss_conf 0331889888865420201101-012540004762552035224553-33122232146755557776----04578887
Q ss_pred H----HHHCCCHHHHHHHHHHHHHHHHHCCCCC--CCCCCEEEEEE--------CCHHHHHHHHHHHH-HCCEEEEEE--
Q ss_conf 8----8627102247899999999876417978--99897289995--------89799999999999-779189862--
Q gi|254780486|r 278 L----IKRKPALHKSLLQLINITDKIANKKIGF--SSQSHIQSIVI--------GDNKSCLNIAKNLQ-KKGFDIRAI-- 340 (381)
Q Consensus 278 ~----l~~~~~~~~~l~~~~~~~~~~~~~~~g~--~~~s~I~~v~~--------gd~~~a~~~~~~L~-~~Gi~v~~i-- 340 (381)
+ =.+++++.-|..+..-+-+++...++.. ++..|-++|-. +|--.|..+..+|. +.||...-|
T Consensus 316 vGL~~GM~~~~LAYRI~QV~YL~~~L~~~Gv~~Q~P~GGHA~FVDA~~LLPHIPa~QFPA~AL~~ELY~~AGIRaVEIGS 395 (468)
T TIGR02617 316 VGLYDGMNEDYLAYRINQVAYLVNGLEDIGVVIQQPAGGHAAFVDAGKLLPHIPADQFPAHALACELYKVAGIRAVEIGS 395 (468)
T ss_pred HHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEECH
T ss_conf 51453003432778899999998557667805764998637676311027888865554888855567761711453101
Q ss_pred ----CCCCCCCCCC----EEEEEC-CCCCCHHHHHHHHHHHHHHHHH
Q ss_conf ----2888888870----399962-8789999999999999999887
Q gi|254780486|r 341 ----RPPTVPINTA----RLRISI-TLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 341 ----~~PtVp~~~~----rlRi~v-~a~~t~edi~~~~~~l~~v~~E 378 (381)
|-|.+.+-.+ .||+++ .+.-|.+.+|-.++++.++-..
T Consensus 396 lLLGRDP~TGKQ~P~P~ELLRLTIPR~~YT~~HMDfiiEAF~~~K~~ 442 (468)
T TIGR02617 396 LLLGRDPKTGKQKPCPAELLRLTIPRATYTQTHMDFIIEAFKSVKEN 442 (468)
T ss_pred HHHCCCCCCCCCCCCHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHH
T ss_conf 42167887878888706776402662011011247899999999875
No 326
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=98.75 E-value=2.7e-06 Score=59.41 Aligned_cols=245 Identities=17% Similarity=0.213 Sum_probs=122.5
Q ss_pred ECCCCHHHH--HHHHHHCCCC-CCCCHHHH--CCHHHHHHHHHCCCCCEEECC-------CCHHHHHHHHHHHHHCCCCC
Q ss_conf 416602456--5566631689-71004542--026775266640876403056-------88147899764310002478
Q gi|254780486|r 96 FGSGYAANM--AILSTLPQAT-DLIVYDKL--VHASIREGINSGKAQAIAIPH-------NNINSFAENINKWRKSGGKG 163 (381)
Q Consensus 96 ~~sG~~An~--~~i~~l~~~~-d~ii~D~~--~HaSi~~g~~ls~a~~~~f~H-------nD~~~Le~~l~~~~~~~~~~ 163 (381)
.++|+.|.- +-+-.-..+. .+.++|.. ||..|+. ..|-++..|+. .|.+.+-..|++. +++
T Consensus 100 t~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~~If~---~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a----~~~ 172 (396)
T COG1448 100 TLGGTGALRVAADFLARFFPDATVWISDPTWPNHKAIFE---AAGLEVETYPYYDAETKGLDFDGMLADLKTA----PEG 172 (396)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH---HCCCCEEEEECCCCCCCCCCHHHHHHHHHHC----CCC
T ss_conf 677612899999999984888628847998275899999---6698145310354666642579999999737----899
Q ss_pred CCEEEECCCC--CCCCCHH--HHHHHHHHHHHCCEEEEECCCC-CCCCCCCCCCEEE-E------EHHCCCCCCCCCCCC
Q ss_conf 6079714621--5766134--6899999863136089861311-2223477764011-0------000134652100134
Q gi|254780486|r 164 FPWIVVESIY--SMDGDKA--PLDDLVKIANDYDGFIVVDEAH-ATGVCGPLGKGLT-H------IIEERNNVIVMHSCS 231 (381)
Q Consensus 164 ~~~vv~egv~--Sm~G~~a--pL~~i~~l~~~y~~~LivDEah-~~Gv~G~~G~G~~-~------~~~~~~~~iv~~Tls 231 (381)
. +|+.-+-. .+.-|.. .-++|.++-++.+.+-++|=|+ ||| .|+- + .....+..++..|||
T Consensus 173 ~-vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~------~GleeDa~~lR~~a~~~~~~lva~S~S 245 (396)
T COG1448 173 S-VVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFA------DGLEEDAYALRLFAEVGPELLVASSFS 245 (396)
T ss_pred C-EEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHC------CCHHHHHHHHHHHHHHCCCEEEEEHHH
T ss_conf 8-899836778988999999999999999997698236632444421------246778999999997298589971000
Q ss_pred CCCCCEE----EE--EECCCCCCCCCC----CCCCCEECCCCCCCCHHHHHHHHHHHHHHCC-----------CHHHHHH
Q ss_conf 6565302----67--524510010000----1211000013577502578988789886271-----------0224789
Q gi|254780486|r 232 KALGSSG----AL--VGSNKIIYDYLI----NYAKPFIYTTSPSPILAVVACEALKLIKRKP-----------ALHKSLL 290 (381)
Q Consensus 232 Ka~g~~G----G~--i~~~~~ii~~l~----~~~~~~ifst~l~P~~~aaa~aal~~l~~~~-----------~~~~~l~ 290 (381)
|.||..| ++ |+.+++.++.+. ...|+ +||+ ||.--+.+.+. +-++| +.|+++.
T Consensus 246 KnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~-~ySn--PP~~Ga~vva~---IL~~p~Lra~W~~El~~Mr~Ri~ 319 (396)
T COG1448 246 KNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRT-NYSN--PPAHGAAVVAT---ILNNPELRAEWEQELEEMRQRIL 319 (396)
T ss_pred HHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHHHH-CCCC--CCHHHHHHHHH---HHCCHHHHHHHHHHHHHHHHHHH
T ss_conf 124434300231588827889999999999999986-3589--84123999999---94899999999999999999999
Q ss_pred HHHHH-HHHHHHCCCC--CC---CCCCEEEEEECCHHHHHHHHHHHH-HCCEEEEEECCCCCCCCCCEEEEECCCCCCHH
Q ss_conf 99999-9987641797--89---989728999589799999999999-77918986228888888703999628789999
Q gi|254780486|r 291 QLINI-TDKIANKKIG--FS---SQSHIQSIVIGDNKSCLNIAKNLQ-KKGFDIRAIRPPTVPINTARLRISITLNVDEP 363 (381)
Q Consensus 291 ~~~~~-~~~~~~~~~g--~~---~~s~I~~v~~gd~~~a~~~~~~L~-~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~e 363 (381)
++... .+.+.....+ |+ .+.-. +.+.|-.. +-..+|+ +.|||+... | ||++ +..|+.
T Consensus 320 ~mR~~lv~~L~~~~~~~~f~~i~~Q~GM-Fsy~Gls~---~QV~rLree~~IY~v~s-------G----Ri~v-aGl~~~ 383 (396)
T COG1448 320 EMRQALVDALKALGAPRNFDFIISQRGM-FSYTGLSP---EQVDRLREEFGIYLVAS-------G----RINV-AGLNTS 383 (396)
T ss_pred HHHHHHHHHHHHHCCCCCCCHHHHCCCE-EECCCCCH---HHHHHHHHHCCEEEECC-------C----EEEE-CCCCHH
T ss_conf 9999999999862788662247546752-44589999---99999998566799537-------8----1465-368744
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999998
Q gi|254780486|r 364 TIVKLFDILPQII 376 (381)
Q Consensus 364 di~~~~~~l~~v~ 376 (381)
.|+.++++|.+|+
T Consensus 384 ni~~va~ai~~v~ 396 (396)
T COG1448 384 NIDYVAKAIAAVL 396 (396)
T ss_pred HHHHHHHHHHHHC
T ss_conf 0899999998649
No 327
>pfam05889 SLA_LP_auto_ag Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). This family consists of several eukaryotic and archaeal proteins which are related to the human soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway. Some archaeal members are annotated as being pyridoxal phosphate-dependent enzymes.
Probab=98.74 E-value=7e-07 Score=63.05 Aligned_cols=271 Identities=13% Similarity=0.167 Sum_probs=137.1
Q ss_pred CCCEEEECCCCHHHHHHHHHHCC--C-CCCCCHHHHCCHHHHHHHHHCCCCCEEE--------CCCCHHHHHHHHHHHHH
Q ss_conf 88516741660245655666316--8-9710045420267752666408764030--------56881478997643100
Q gi|254780486|r 90 FEKMLYFGSGYAANMAILSTLPQ--A-TDLIVYDKLVHASIREGINSGKAQAIAI--------PHNNINSFAENINKWRK 158 (381)
Q Consensus 90 ~e~al~~~sG~~An~~~i~~l~~--~-~d~ii~D~~~HaSi~~g~~ls~a~~~~f--------~HnD~~~Le~~l~~~~~ 158 (381)
...|+++|..+.--+..+-++.+ | ...|++-.--|-|-+..+..++-+.+.. -+-|++++|+.+++...
T Consensus 74 ~~~~~vvP~aTGMsl~~~L~~~~~rp~a~yViw~RiDqKSc~Kai~~AGl~p~vVe~~~~~d~l~Td~~~ie~~i~~~g~ 153 (389)
T pfam05889 74 VKNCFVVPLATGMSLLCMLSWRRKRPKAKYVIWPRIDQKSSIKAAERAGFEPRLVETVLDGDYLITDVNDVETIIEEKGE 153 (389)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEEEEECCCEEECCHHHHHHHHHHHCC
T ss_conf 16578950410479999999985588997899863555226899997697148875252288243589999999998387
Q ss_pred CCCCCCCEEEECCCCCCCCCHHH-----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHH----CCCCCCCCCC
Q ss_conf 02478607971462157661346-----89999986313608986131122234777640110000----1346521001
Q gi|254780486|r 159 SGGKGFPWIVVESIYSMDGDKAP-----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIE----ERNNVIVMHS 229 (381)
Q Consensus 159 ~~~~~~~~vv~egv~Sm~G~~ap-----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~----~~~~~iv~~T 229 (381)
+...+| +|...-+|| +.+|.+||++|++--+|.-|+|+ +-.-+++... ....+.++.|
T Consensus 154 ---~~ilcV-----lsTTScFaPR~pD~v~~IAklC~~~~IpHvVNnAYGl-----Q~~~~~~~i~~a~r~GRVDa~VQS 220 (389)
T pfam05889 154 ---EVILAV-----LSTTSCFAPRSPDNVKEIAKICAEYDVPHLVNGAYGI-----QSEETIRLIAAAHECGRVDAVVQS 220 (389)
T ss_pred ---CCEEEE-----EECCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHH-----HHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf ---766899-----8446656999966799999999974997478430366-----179999999999863882189970
Q ss_pred CCCCCCC-E-EEEEEC-CCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHH--------HHHHHCCCHHHHHHHHHHHHHH
Q ss_conf 3465653-0-267524-510010000121100001357750257898878--------9886271022478999999998
Q gi|254780486|r 230 CSKALGS-S-GALVGS-NKIIYDYLINYAKPFIYTTSPSPILAVVACEAL--------KLIKRKPALHKSLLQLINITDK 298 (381)
Q Consensus 230 lsKa~g~-~-GG~i~~-~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal--------~~l~~~~~~~~~l~~~~~~~~~ 298 (381)
.-|-|=. . ||.|++ ++++++.+.. .|-.-.+.+|..= .-..-| ++++++.+....+++....+..
T Consensus 221 tDKNflVPVGGaIIas~d~~~i~~is~---~YPGRAS~sp~lD-lfITLLslG~~gy~~Ll~eRke~~~~l~e~L~~~a~ 296 (389)
T pfam05889 221 LDKNFIVPVGGAIIAAFDESFIQEISE---EYPGRASARPSKD-KLITLLSLGCKAYLALMKEQKEMFPLLRELLKDLAE 296 (389)
T ss_pred CCCCEEEECCCEEEEECCHHHHHHHHH---CCCCCCCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 686625534874897088899999984---1899777740799-999999974888999999999999999999999999
Q ss_pred HHHCCCCCCCCCCEEEEE-EC-----CHHHHHHHHHHHHHCCEEEEEECCCCCCCCC--------CEEEEECCCCCCHHH
Q ss_conf 764179789989728999-58-----9799999999999779189862288888887--------039996287899999
Q gi|254780486|r 299 IANKKIGFSSQSHIQSIV-IG-----DNKSCLNIAKNLQKKGFDIRAIRPPTVPINT--------ARLRISITLNVDEPT 364 (381)
Q Consensus 299 ~~~~~~g~~~~s~I~~v~-~g-----d~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~--------~rlRi~v~a~~t~ed 364 (381)
.-...+.-....||-.-+ +. +......+...|+.|+|--.-+..|.-+.++ +.+-+.-....|++|
T Consensus 297 ~~ge~lL~t~~N~IS~aitl~~l~~~~~~~~t~lgs~Lf~r~VsG~RvV~~~~~~~~~~~~~y~~~Ylt~aaaiG~~~~d 376 (389)
T pfam05889 297 EVGEQLLDVPHNPISSAMTLETLDEISKKGRTDLGSELFSRRVTGARVVRSSDPFGTIEGCEYHGRYLNIASAIGMKDED 376 (389)
T ss_pred HHCCEEECCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCEEECCCCCCHHHHHHHHCCCCHHH
T ss_conf 82987513899951688873455666755499999999756787651665688853461676883678999870886899
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999988
Q gi|254780486|r 365 IVKLFDILPQIIS 377 (381)
Q Consensus 365 i~~~~~~l~~v~~ 377 (381)
||.+++.|+++++
T Consensus 377 Vd~f~~rL~k~l~ 389 (389)
T pfam05889 377 VDYVIERLDEILE 389 (389)
T ss_pred HHHHHHHHHHHHC
T ss_conf 9999999998529
No 328
>pfam02347 GDC-P Glycine cleavage system P-protein. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is:- Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2
Probab=98.73 E-value=1.5e-06 Score=60.96 Aligned_cols=305 Identities=14% Similarity=0.198 Sum_probs=152.6
Q ss_pred CCCCCCCCHHHHHHHHH-HHHH--HCCCCCC--CCCCCCCCCHHHHHHHHHHHHHCCCC--CEEEECCCCHHHHHHHHHH
Q ss_conf 65667798899999999-9986--3786887--22443688589999999984012888--5167416602456556663
Q gi|254780486|r 38 DYLALSSSTLLREKILS-SLDS--KIPIGSG--GSRLLCGNYNQHLELEEEAADFFGFE--KMLYFGSGYAANMAILSTL 110 (381)
Q Consensus 38 dYLGl~~~p~v~~a~~~-a~~~--~~g~~~~--~sr~~~G~~~~~~~lE~~lA~~~g~e--~al~~~sG~~An~~~i~~l 110 (381)
+|+|..-....+.++++ .+.. .|-+... =+-.--|+....-+.-..++++.|+| .|-++.-++.+..++..+.
T Consensus 68 sfiG~G~y~h~vP~vi~~~i~~r~efyTaYTPYQpEiSQG~LqalfefQtmi~eLTGmdvaNASlyD~aTA~aEA~~ma~ 147 (429)
T pfam02347 68 SFIGMGYYDTIIPAVILRNILENPEWYTQYTPYQPEISQGRLEALLNFQTMVCDLTGLDVANASLLDEGTAAAEAMALAA 147 (429)
T ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 31578777976581564654047664303699981544379999999999999985887568766667889999999987
Q ss_pred --CC-CCCCCCHHHHCCHHHHHHH----HHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHH
Q ss_conf --16-8971004542026775266----6408764030568814789976431000247860797146215766134689
Q gi|254780486|r 111 --PQ-ATDLIVYDKLVHASIREGI----NSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLD 183 (381)
Q Consensus 111 --~~-~~d~ii~D~~~HaSi~~g~----~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~ 183 (381)
.+ +.+.|+.++..|...++=+ +..+..++..+++|.. . ...+....|+++-- ...|.+-++.
T Consensus 148 r~~k~~~~~vlv~~~~hP~~~~Vl~T~~~~~~i~i~~~~~~~~~---~-------~~~~~~a~v~~q~P-n~~G~ied~~ 216 (429)
T pfam02347 148 RISKGKKKKFVVDKDCHPQTLDVLRTRAKGFGIEIVEVDLTEEG---F-------SDEGDVFGVLVQYP-NTEGRIEDYK 216 (429)
T ss_pred HHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCC---C-------CCCCCEEEEEEECC-CCCCCEECCH
T ss_conf 65157887799828878318999997542279579996720014---5-------55547689999379-9983172349
Q ss_pred HHHHHHHHCCEEEEEC-CCCCCCCCCCCCCEEEEEHHCCCCCCCCCC---CCC--CCCC-EEEEEECCCCCCCCC-----
Q ss_conf 9999863136089861-311222347776401100001346521001---346--5653-026752451001000-----
Q gi|254780486|r 184 DLVKIANDYDGFIVVD-EAHATGVCGPLGKGLTHIIEERNNVIVMHS---CSK--ALGS-SGALVGSNKIIYDYL----- 251 (381)
Q Consensus 184 ~i~~l~~~y~~~LivD-Eah~~Gv~G~~G~G~~~~~~~~~~~iv~~T---lsK--a~g~-~GG~i~~~~~ii~~l----- 251 (381)
++.+++++.|++++|- |--++|++-+ -+...-+|++|+ |+= .||+ ..||++++++++..+
T Consensus 217 ~i~~~~h~~gal~iv~~dplsL~ll~~--------Pg~~GaDI~vG~~Q~lGipm~fGGP~~gf~a~~~~~~R~~PGRiv 288 (429)
T pfam02347 217 ELIEIAHQHGSLVVVAADLLALTILKP--------PGEFGADIVVGSAQRFGVPMGYGGPHAGFFAVKEELKRKMPGRIV 288 (429)
T ss_pred HHHHHHHHCCCEEEEEECHHHHCCCCC--------CCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 999998645966999807799607689--------765663379725765788878898820015448889974997644
Q ss_pred ------------------------CCCCCCEECCCCCCCCHHHHHHHHHHHHHHCC----CHHHHHHHHHHHHHHHHHCC
Q ss_conf ------------------------01211000013577502578988789886271----02247899999999876417
Q gi|254780486|r 252 ------------------------INYAKPFIYTTSPSPILAVVACEALKLIKRKP----ALHKSLLQLINITDKIANKK 303 (381)
Q Consensus 252 ------------------------~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~----~~~~~l~~~~~~~~~~~~~~ 303 (381)
|.++.++|-|+. ..+ |..+++-+.--.| ++.++..+++.++.+.....
T Consensus 289 G~t~D~~G~~~~~ltLqtREQHIrReKAtSNICTnq---aL~-A~~a~~Y~~~~Gp~GL~~iA~~~~~~A~yl~~~L~~~ 364 (429)
T pfam02347 289 GVSKDANGKRALRLALQTREQHIRRDKATSNICTAQ---ALL-ANMAAMYAVYHGPKGLKEIARRIHSLTLYLAKGLKKL 364 (429)
T ss_pred CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHH---HHH-HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 677588998733654124343033444203465008---999-9999999998697889999999999999999999866
Q ss_pred CCC--CCCCCEEEEEEC-CHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 978--998972899958-979999999999977918986228888888703999628789999999999999
Q gi|254780486|r 304 IGF--SSQSHIQSIVIG-DNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDIL 372 (381)
Q Consensus 304 ~g~--~~~s~I~~v~~g-d~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l 372 (381)
.++ ....-.-.+.+. .+..+.++.++....|+-. +||- .+ .+-++++=.+|++|||++++++
T Consensus 365 ~g~~~~~~~Ffd~v~~~~~~~~~~~l~~~~i~~G~~l---~~~~--~~--~~li~vtE~~T~edId~Lv~~f 429 (429)
T pfam02347 365 AGHELDHDHFFDTLKITVEDRAAEELLKRAEKGGINL---RYVD--LG--TVGIALDETTTKEDVDALLKVF 429 (429)
T ss_pred CCEECCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCE---EECC--CC--EEEEEECCCCCHHHHHHHHHHC
T ss_conf 9976679996215999628278999999999779973---6538--99--4999964799999999999759
No 329
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=98.72 E-value=2e-05 Score=53.91 Aligned_cols=319 Identities=14% Similarity=0.167 Sum_probs=162.2
Q ss_pred CCEEEECCCCCCCCCCCCHHHHH-HHHHHHHHHCCCC--CCCCCCCCCCCHHHHHHHHHHHHHCCCC--CEEEECCCCHH
Q ss_conf 97689803446566779889999-9999998637868--8722443688589999999984012888--51674166024
Q gi|254780486|r 28 RQDIWDFTSHDYLALSSSTLLRE-KILSSLDSKIPIG--SGGSRLLCGNYNQHLELEEEAADFFGFE--KMLYFGSGYAA 102 (381)
Q Consensus 28 ~~~~l~f~s~dYLGl~~~p~v~~-a~~~a~~~~~g~~--~~~sr~~~G~~~~~~~lE~~lA~~~g~e--~al~~~sG~~A 102 (381)
++++.+|-+.-|-+- .-|.++. ...+.-+ |-+. +.-+-.--|..+..-+.-..+++++|.| .|-++--++.+
T Consensus 73 N~~~~sfiG~GyY~~-~~P~vI~rnile~pe--wyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAa 149 (450)
T COG0403 73 NKVFTSFIGAGYYDT-YTPPVILRNILENPE--WYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAA 149 (450)
T ss_pred CCHHHHHCCCCCCCC-CCCHHHHHHHHCCCC--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
T ss_conf 661454256864687-182788887643854--22367888636665799999989999999858874450023167699
Q ss_pred HHHHHHHH--CC-CCCCCCHHHHCCHHHHHHHH----HCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
Q ss_conf 56556663--16-89710045420267752666----4087640305688147899764310002478607971462157
Q gi|254780486|r 103 NMAILSTL--PQ-ATDLIVYDKLVHASIREGIN----SGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSM 175 (381)
Q Consensus 103 n~~~i~~l--~~-~~d~ii~D~~~HaSi~~g~~----ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm 175 (381)
..+..-+. .+ +...++.++.+|..-.+-++ -.+-++...+++|.++|++. ... ...-|+++=-- .
T Consensus 150 AEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l~~~-~~~------~~~gv~vQyP~-~ 221 (450)
T COG0403 150 AEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDDLESA-DDG------DVFGVLVQYPN-T 221 (450)
T ss_pred HHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHC-CCC------CEEEEEEECCC-C
T ss_conf 999999987414767349966886877999998611257639999564225566532-467------73799997688-8
Q ss_pred CC-CHHHHHHHHHHHHHCCEEEEEC-CCCCCCCCCCCCCEEEEEHHCCCCCCCCCC---CCCCCCCEE---EEEECCCCC
Q ss_conf 66-1346899999863136089861-311222347776401100001346521001---346565302---675245100
Q gi|254780486|r 176 DG-DKAPLDDLVKIANDYDGFIVVD-EAHATGVCGPLGKGLTHIIEERNNVIVMHS---CSKALGSSG---ALVGSNKII 247 (381)
Q Consensus 176 ~G-~~apL~~i~~l~~~y~~~LivD-Eah~~Gv~G~~G~G~~~~~~~~~~~iv~~T---lsKa~g~~G---G~i~~~~~i 247 (381)
+| .+.++.++.+.++++|++++|= |--+++.+-+- |...-+|++|+ |+--+|-.| ||.++++++
T Consensus 222 ~G~~~~d~~~l~~~~h~~~al~~v~aDplaL~LL~pP--------Ge~GADIvvG~~QrfGvPmgfGGPhag~fA~~~~~ 293 (450)
T COG0403 222 FGIVEEDLRALIEAAHSAGALVIVAADPLALGLLKPP--------GEFGADIVVGSAQRFGVPMGFGGPHAGYFAVKDEF 293 (450)
T ss_pred CCCCCHHHHHHHHHHHHCCCEEEEEECHHHHHCCCCC--------CCCCCCEEEECCCCCCCCCCCCCCCEEEEEEHHHH
T ss_conf 7734140999999986359779998263676455784--------10378669733760477767887563222375867
Q ss_pred CCCC----------------------------C-CCCCCEECCCCCCCCHHHHHHHHHHHHHHCC-CH---HHHHHHHHH
Q ss_conf 1000----------------------------0-1211000013577502578988789886271-02---247899999
Q gi|254780486|r 248 YDYL----------------------------I-NYAKPFIYTTSPSPILAVVACEALKLIKRKP-AL---HKSLLQLIN 294 (381)
Q Consensus 248 i~~l----------------------------~-~~~~~~ifst~l~P~~~aaa~aal~~l~~~~-~~---~~~l~~~~~ 294 (381)
+..+ | .++.+.|-|+ .+.. |..+++-..--.| .+ .++..+...
T Consensus 294 ~R~mPGRlVG~S~D~~G~~A~rLaLQTREQHIRReKATSNICTn---QaLl-A~~As~y~~~hGp~GLk~iA~r~~~~a~ 369 (450)
T COG0403 294 KRQMPGRLVGVSVDAAGKRAFRLALQTREQHIRREKATSNICTN---QALL-ALAASMYAVYHGPQGLKEIAERIHRLAA 369 (450)
T ss_pred HHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCHHHHHH---HHHH-HHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_conf 42599843304645899803201287788887640010155489---9999-9999999998696889999999999999
Q ss_pred HHH-HHHHCCCCCCC--CCCEEEEEECCH-HHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 999-87641797899--897289995897-99999999999779189862288888887039996287899999999999
Q gi|254780486|r 295 ITD-KIANKKIGFSS--QSHIQSIVIGDN-KSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFD 370 (381)
Q Consensus 295 ~~~-~~~~~~~g~~~--~s~I~~v~~gd~-~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~ 370 (381)
++. ++.....|+.. ...+-.+.+.-+ ..+..+.++....|+....+.. ..+=++++=.+|+++|+.+++
T Consensus 370 ~la~~L~~~~~g~~~~~~~fFdt~~v~~~~~~~~~l~~~~~~~G~~L~~~~~-------~~~~ia~tEt~t~~~i~~l~~ 442 (450)
T COG0403 370 YLAAGLKEIGAGVELVFDHFFDTFTVRVPEEVAEALLAAAIAGGINLRRVDA-------DTVLIALTETTTKEDIDALVA 442 (450)
T ss_pred HHHHHHHHCCCCEEECCCCCEEEEEEECCHHHHHHHHHHHHHCCCCEEEECC-------CCEEEEEECCCCHHHHHHHHH
T ss_conf 9999876458864751424220488864636799999999854974145448-------815999512567899999999
Q ss_pred HHHHHH
Q ss_conf 999998
Q gi|254780486|r 371 ILPQII 376 (381)
Q Consensus 371 ~l~~v~ 376 (381)
++..+.
T Consensus 443 ~~~~~~ 448 (450)
T COG0403 443 AFGGVN 448 (450)
T ss_pred HHHHHC
T ss_conf 975331
No 330
>PRK09275 aspartate aminotransferase; Provisional
Probab=98.68 E-value=4.8e-06 Score=57.83 Aligned_cols=323 Identities=21% Similarity=0.216 Sum_probs=159.6
Q ss_pred CCCCCCCCHHHHHHHHHHH-HHHCCCCCCCCCCCC-CCCHHHHHHHHHHHHHCCC-CCEEEEC--CCCHHHHHHHHHH--
Q ss_conf 6566779889999999999-863786887224436-8858999999998401288-8516741--6602456556663--
Q gi|254780486|r 38 DYLALSSSTLLREKILSSL-DSKIPIGSGGSRLLC-GNYNQHLELEEEAADFFGF-EKMLYFG--SGYAANMAILSTL-- 110 (381)
Q Consensus 38 dYLGl~~~p~v~~a~~~a~-~~~~g~~~~~sr~~~-G~~~~~~~lE~~lA~~~g~-e~al~~~--sG~~An~~~i~~l-- 110 (381)
+.||+..+ +++-+.++++ ...|++ -.|++. -..-+++-|.+++..=... .+.=+|+ .|++|..=++.+|
T Consensus 112 ~~~g~d~d-~~v~El~dgiiGdnYPv---P~RmL~~~E~Iv~~YL~~em~~~~~~~~~fdlFatEGgTAAM~YiF~sL~~ 187 (531)
T PRK09275 112 DELGFDPD-EFVYEMVDGIIGDNYPV---PDRMLVHTEKIVKDYLRQEMCGNRPPPGEFDLFAVEGGTAAMCYIFDSLKE 187 (531)
T ss_pred HHHCCCHH-HHHHHHHHHHHCCCCCC---CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCHHHHHHHHHHHHH
T ss_conf 88699988-99999998863388999---678889899999999999962899998873167416720579999999997
Q ss_pred ---CCCCCCCCHHHHCCHHHHHH----HHHCCCC-----CEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCC----CC
Q ss_conf ---16897100454202677526----6640876-----40305688147899764310002478607971462----15
Q gi|254780486|r 111 ---PQATDLIVYDKLVHASIREG----INSGKAQ-----AIAIPHNNINSFAENINKWRKSGGKGFPWIVVESI----YS 174 (381)
Q Consensus 111 ---~~~~d~ii~D~~~HaSi~~g----~~ls~a~-----~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv----~S 174 (381)
..+||-|-.-. .|..- -.|..-. +..-+.++++=-++.+.+.+. ++.+.+.+|..- ++
T Consensus 188 N~LL~~GDkIAi~~----PIFTPYlEIP~L~~Y~l~vV~i~a~~~~~WQy~d~EleKL~D--P~IKAlf~VNPsNP~S~~ 261 (531)
T PRK09275 188 NGLLKAGDKIALMT----PIFTPYLEIPELPDYDLEVVHISADEKNEWQYPDKELEKLRD--PSIKALFVVNPSNPPSVA 261 (531)
T ss_pred CCCCCCCCEEEEEC----CCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHCC--CCCEEEEEECCCCCCCCC
T ss_conf 58878898789956----777763016776667862899855654588779899987449--771189998999986665
Q ss_pred CCCCHHHHHHHHHHHHHC--CEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE---EEEECCCC-CC
Q ss_conf 766134689999986313--6089861311222347776401100001346521001346565302---67524510-01
Q gi|254780486|r 175 MDGDKAPLDDLVKIANDY--DGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG---ALVGSNKI-IY 248 (381)
Q Consensus 175 m~G~~apL~~i~~l~~~y--~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G---G~i~~~~~-ii 248 (381)
|+- -.+.+|.++.+++ +.++|-||++|+ +-+..+.+.. .+..+.|.+=||||=||+.| |.|+-.++ +.
T Consensus 262 ls~--e~l~~i~~IV~~~nPdLmIiTDDVYgT--F~~~F~Sl~a--~~P~NTi~VYSfSKyFGaTGWRLG~Ialh~~Nvf 335 (531)
T PRK09275 262 MSD--ESLEKIADIVKEDRPDLMIITDDVYGT--FVDDFRSLFA--ELPYNTLLVYSFSKYFGATGWRLGVIALHEDNVF 335 (531)
T ss_pred CCH--HHHHHHHHHHHHCCCCEEEEECCCCCC--CCCCCEEHHH--HCCCCEEEEEEEHHCCCCCCCCCEEEEECCCCCH
T ss_conf 699--999999999974299879995465322--6456463656--4887547888631005884411034454103307
Q ss_pred CCC------------C-CC-------------------CC--CEECCCCCC-CCHHHHHHHHHH-HHHHCCCHHHHHHHH
Q ss_conf 000------------0-12-------------------11--000013577-502578988789-886271022478999
Q gi|254780486|r 249 DYL------------I-NY-------------------AK--PFIYTTSPS-PILAVVACEALK-LIKRKPALHKSLLQL 292 (381)
Q Consensus 249 ~~l------------~-~~-------------------~~--~~ifst~l~-P~~~aaa~aal~-~l~~~~~~~~~l~~~ 292 (381)
|.+ . .+ +| +.-.|.++| |..+..++-++- ++.+...-.+..+++
T Consensus 336 D~~i~~Lp~~~k~~L~~RY~~lt~~P~~lkFIDRlVADSR~VALnHTAGLStPQQvqM~LFsl~~L~d~~~~Yk~~~~~i 415 (531)
T PRK09275 336 DKLIAELPEEKKKELDKRYSSLTTEPEKLKFIDRLVADSRQVALNHTAGLSTPQQVQMALFSLFSLLDEEDAYKKAMKDI 415 (531)
T ss_pred HHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 79998668878999998775546882335406776521788887660378809999999999998627733899999999
Q ss_pred HHHHHHHHHCCCCCCCC-CC--E---EEEEE--------CC--------HHHHHHHHHHHH-HCCEEEEEECCCCCCCCC
Q ss_conf 99999876417978998-97--2---89995--------89--------799999999999-779189862288888887
Q gi|254780486|r 293 INITDKIANKKIGFSSQ-SH--I---QSIVI--------GD--------NKSCLNIAKNLQ-KKGFDIRAIRPPTVPINT 349 (381)
Q Consensus 293 ~~~~~~~~~~~~g~~~~-s~--I---~~v~~--------gd--------~~~a~~~~~~L~-~~Gi~v~~i~~PtVp~~~ 349 (381)
++.+.+..-..+|++.. .+ . .-+-+ |+ .....++.-+|. +.|+.+-+..-=.+|.++
T Consensus 416 i~~R~~~L~~~lg~~~~~~~~~~~YYt~idl~~~a~~~yg~~F~~~l~~~~~p~d~lfrLA~e~~vVLl~G~GF~~p~ws 495 (531)
T PRK09275 416 IRRRYKALYEGLGLPEPEDPNNAAYYTLIDLEEWAEKNYGKEFAEYLKKNYSPLDLLFRLAEETGIVLLPGGGFGGPEWS 495 (531)
T ss_pred HHHHHHHHHHHCCCCCCCCCCCCCEEEEEEHHHHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHCCEEEECCCCCCCCCCC
T ss_conf 99999999985499988898765524566099999987678999999972888889999998737899558877999862
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 039996287899999999999999998873
Q gi|254780486|r 350 ARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 350 ~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
+|+++ |...++|-.+.-..|.++++|.
T Consensus 496 --~RVSL-ANL~~~dY~~IG~~i~~~l~eY 522 (531)
T PRK09275 496 --LRVSL-ANLNEEDYAKIGKSIRKLLDEY 522 (531)
T ss_pred --EEEEE-CCCCHHHHHHHHHHHHHHHHHH
T ss_conf --58873-6899889999999999999999
No 331
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase; InterPro: IPR005815 All members of the seed alignment have been demonstrated experimentally to act as (2.6.1.62 from EC), an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae. ; GO: 0004015 adenosylmethionine-8-amino-7-oxononanoate transaminase activity, 0009102 biotin biosynthetic process.
Probab=98.65 E-value=1.1e-05 Score=55.47 Aligned_cols=339 Identities=17% Similarity=0.179 Sum_probs=185.7
Q ss_pred HHCCCEEEECCCC----EEEECCCCCCCCCC--CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC-
Q ss_conf 9759839992897----68980344656677--9889999999999863786887224436885899999999840128-
Q gi|254780486|r 17 KSKGRHRQLLRRQ----DIWDFTSHDYLALS--SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFG- 89 (381)
Q Consensus 17 ~~~g~~~~~~~~~----~~l~f~s~dYLGl~--~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g- 89 (381)
..+|-..++.+|+ ++++-.+.=+-.+. +||.+.+++.+.++....+-.+|- +++.-.++-+++.+..+
T Consensus 33 ~~~g~~~~~~~g~p~~~~~~d~~~~ww~~~~g~~~p~~~~~~~~~~~~~~~~~~gg~-----~~~~~~~~~~~~~~~~~~ 107 (466)
T TIGR00508 33 SADGVELTLEDGRPVDVRLIDGLSSWWAAIHGYNHPRLNAAAQKQLDKLSHVLFGGL-----THEPAVELCRKLLKLTPE 107 (466)
T ss_pred CCCCEEEEECCCCCCEEEEECCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHCCC
T ss_conf 356416886378842033321101345544057752456788887876555552354-----431578999999973463
Q ss_pred -CCCEEEECCCCHHHHHHHHHHC----CC----------------C----CCCCHHHHCC-HHHHHH-------------
Q ss_conf -8851674166024565566631----68----------------9----7100454202-677526-------------
Q gi|254780486|r 90 -FEKMLYFGSGYAANMAILSTLP----QA----------------T----DLIVYDKLVH-ASIREG------------- 130 (381)
Q Consensus 90 -~e~al~~~sG~~An~~~i~~l~----~~----------------~----d~ii~D~~~H-aSi~~g------------- 130 (381)
.+.+++..+|..+....+.... .+ + ..-++|..+- .+++.|
T Consensus 108 ~~~~~~~~d~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~gd~~~~~~~cdp~~~~~~~~~~~~~~~~~~~~p~~ 187 (466)
T TIGR00508 108 PLDCVFLADSGSVAVEVALKLALQYWKGKGEPERTKFLTLRNGYHGDTFGALSVCDPENGLHSLWKGYLPENLFAPAPSI 187 (466)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHCCCCHHHHHEEEEECCCCCCCCCCCEECCCCCCHHHHHCCCCCHHHHCCCCCH
T ss_conf 10045530576402466778877654202411132100000454554334211026653212332022220221256511
Q ss_pred ---HHHCCCCC-EEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCH-----HHHHHHHHHHHHCCEEEEECCC
Q ss_conf ---66408764-03056881478997643100024786079714621576613-----4689999986313608986131
Q gi|254780486|r 131 ---INSGKAQA-IAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDK-----APLDDLVKIANDYDGFIVVDEA 201 (381)
Q Consensus 131 ---~~ls~a~~-~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~-----apL~~i~~l~~~y~~~LivDEa 201 (381)
...+.... -.+...++..+...+..+.. +....+++|.+..-.|.+ .-+.++..+|++|+.++++||.
T Consensus 188 ~~g~p~~~~~~~~~w~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~g~gg~~~~~p~~~~~~~~~~~~~~~~~~~d~~ 264 (466)
T TIGR00508 188 VDGLPTSQVRFDEEWNEEDISPLAKLLELHGD---ETVAAVILEPIVQGAGGLRFYHPTYLKRVRALCKKYGLLLIADEI 264 (466)
T ss_pred HCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC---CHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEEEHHH
T ss_conf 11565555677653104567789999985225---401123334444045764102378999999986442010220113
Q ss_pred CCCCCCCCCCCEE-EEEHH---------------CCCCCCCCCCCCCCCCCEEEEEECC-----CCCCCCCCCCC----C
Q ss_conf 1222347776401-10000---------------1346521001346565302675245-----10010000121----1
Q gi|254780486|r 202 HATGVCGPLGKGL-THIIE---------------ERNNVIVMHSCSKALGSSGALVGSN-----KIIYDYLINYA----K 256 (381)
Q Consensus 202 h~~Gv~G~~G~G~-~~~~~---------------~~~~~iv~~TlsKa~g~~GG~i~~~-----~~ii~~l~~~~----~ 256 (381)
- .| +|++|.-. +++.+ +.|++++ ++|++- |||+.-+ ..+.+.+.+-. .
T Consensus 265 ~-~g-~g~~g~~~~~~~~~~~~~~~g~~p~~~~~~~pd~~c---~g~~~~--gg~~~~~~~~~~~~~~~~~~~~~~p~~g 337 (466)
T TIGR00508 265 A-TG-FGRTGKLFACEHAGKYQDQHGISPSDQIKVVPDILC---LGKALT--GGYLTLSATLTTDKVAETISSGEGPTGG 337 (466)
T ss_pred H-HC-CCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCHHH---HCCCCC--CCCEEEEHHHHHHHHHHHHCCCCCCCCC
T ss_conf 2-03-575320110121001001027884322010320221---100003--4300000012234567754067776452
Q ss_pred CEECCC--CCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC----CCC--------CCCCCEEEEEECCHHH
Q ss_conf 000013--57750257898878988627102247899999999876417----978--------9989728999589799
Q gi|254780486|r 257 PFIYTT--SPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIANKK----IGF--------SSQSHIQSIVIGDNKS 322 (381)
Q Consensus 257 ~~ifst--~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~----~g~--------~~~s~I~~v~~gd~~~ 322 (381)
.+++.- -.+|..|+.+.++++++.+.++..+...-......++.... .|+ .....+-.+....+..
T Consensus 338 ~~~~gp~~~~~p~~c~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~p~~~~~~~g~~g~~~~~~~~~g~~g~~~~~~~~~ 417 (466)
T TIGR00508 338 CFLHGPTFLGNPLACAVAEASLALLLEGPWQKQVSAIESQLKRELSPLRKNPDNGLIGTGVKDVRVLGAIGVVELKEPVN 417 (466)
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC
T ss_conf 13216420133245666666788774030467899998888876643211566652010011222220010100012357
Q ss_pred HHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 99999999977918986228888888703999628789999999999999999887
Q gi|254780486|r 323 CLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 323 a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
...+.+...++|+++.++.. .+-+.++...+.+++.++...+...+.+
T Consensus 418 ~~~~~~~~~~~g~w~~p~g~--------~~~~~pp~~~~~~~~~~~~~~~~~~~~~ 465 (466)
T TIGR00508 418 VEELQKGFVEKGVWIRPFGK--------LLYLLPPYVITSEELAKLTAALIEALKG 465 (466)
T ss_pred HHHHHHHHHHCCCEECCCCC--------EEEECCCCCCCHHHHHHHHHHHHHHHHC
T ss_conf 88887787643741211353--------6564176200448888999999987505
No 332
>KOG0629 consensus
Probab=98.60 E-value=5.9e-06 Score=57.27 Aligned_cols=278 Identities=17% Similarity=0.240 Sum_probs=140.4
Q ss_pred CCEEEECCCCHHHHHHHHH-----HC--------C-CCCCCCHHHHCCHHHHHHHHHCC---CCCEEECCC-----CHHH
Q ss_conf 8516741660245655666-----31--------6-89710045420267752666408---764030568-----8147
Q gi|254780486|r 91 EKMLYFGSGYAANMAILST-----LP--------Q-ATDLIVYDKLVHASIREGINSGK---AQAIAIPHN-----NINS 148 (381)
Q Consensus 91 e~al~~~sG~~An~~~i~~-----l~--------~-~~d~ii~D~~~HaSi~~g~~ls~---a~~~~f~Hn-----D~~~ 148 (381)
-+.++.|.|..+|+=++.+ +. . |.-++|.-+++|-|+..++...+ -.++..+-| +++|
T Consensus 160 ~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSeesHYSi~kaAa~lg~gtd~c~~v~t~e~Gkm~~~d 239 (510)
T KOG0629 160 GDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSEESHYSIKKAAAFLGLGTDHCIKVKTDERGKMIPDD 239 (510)
T ss_pred CCCEECCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHH
T ss_conf 88653688406778999888761184244300203885789842420124999999856687506883255568656699
Q ss_pred HHHHHHHHHHCCCCCCCEEE--EC--CCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCC-CCCCCEEEEEHHCCCC
Q ss_conf 89976431000247860797--14--6215766134689999986313608986131122234-7776401100001346
Q gi|254780486|r 149 FAENINKWRKSGGKGFPWIV--VE--SIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVC-GPLGKGLTHIIEERNN 223 (381)
Q Consensus 149 Le~~l~~~~~~~~~~~~~vv--~e--gv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~-G~~G~G~~~~~~~~~~ 223 (381)
||+++.+....... +++| +- .|| |-+-||..+.++|++|+.++.||-|-+=|.+ -+.-|- -..|....
T Consensus 240 Le~kile~k~kg~~--Pf~vnaTaGTTV~---GAFDdL~~iadiC~k~~lWmHvDAAwGGglLmS~k~R~--kl~Giera 312 (510)
T KOG0629 240 LEKKILEAKAKGGV--PFFVNATAGTTVL---GAFDDLNGIADICEKHKLWMHVDAAWGGGLLMSRKHRH--KLTGIERA 312 (510)
T ss_pred HHHHHHHHHHCCCC--CEEEEECCCCEEE---ECCCCHHHHHHHHHHCCEEEEEECCCCCCCCCCHHHHH--HCCCCCCC
T ss_conf 99999988854899--7599824786664---24586788999987548799951000555124755576--40575325
Q ss_pred CCCCCCCCCCCCC---EEEEEECCCCCCCCCCCCCCCEECC----------CCCCCCHHHHHHHHHH--H-HHHC-----
Q ss_conf 5210013465653---0267524510010000121100001----------3577502578988789--8-8627-----
Q gi|254780486|r 224 VIVMHSCSKALGS---SGALVGSNKIIYDYLINYAKPFIYT----------TSPSPILAVVACEALK--L-IKRK----- 282 (381)
Q Consensus 224 ~iv~~TlsKa~g~---~GG~i~~~~~ii~~l~~~~~~~ifs----------t~l~P~~~aaa~aal~--~-l~~~----- 282 (381)
.-++-.-.|-+|+ .+.++.-..-+.+...+....|.|. |+--...|.--.-.++ + .+..
T Consensus 313 ~SvtwnpHK~~gaplqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~YdvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gf 392 (510)
T KOG0629 313 NSVTWNPHKLMGAPLQCSAFLTREEGLLQRCNQMSAIYLFQQDKFYDVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGF 392 (510)
T ss_pred CCEEECHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHCCCCEEECCCCCCCCHHHCCCCCCHHHHHHHHHHCCCCCH
T ss_conf 74116678864586124579988777887640200244314685652100356303324765429999999973256258
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCC----CC-CCCEE-EEE-EC--------C-------HHHHHHHHHHHHHCCEEEEEE
Q ss_conf 102247899999999876417978----99-89728-999-58--------9-------799999999999779189862
Q gi|254780486|r 283 PALHKSLLQLINITDKIANKKIGF----SS-QSHIQ-SIV-IG--------D-------NKSCLNIAKNLQKKGFDIRAI 340 (381)
Q Consensus 283 ~~~~~~l~~~~~~~~~~~~~~~g~----~~-~s~I~-~v~-~g--------d-------~~~a~~~~~~L~~~Gi~v~~i 340 (381)
....++..++++|+.......-++ .. +.+.. +.. ++ + ..-+..+..+++++|-.- +
T Consensus 393 e~~v~k~~~lA~yl~~~lrer~~~~~l~~~~pe~~nv~fw~vp~~lR~~~~~~e~~~rL~kVaPkIK~~Mm~~Gt~M--i 470 (510)
T KOG0629 393 EAQVDKCLRLAEYLYDRLREREGFEMLFELEPEHVNVCFWYVPPSLRGWQENPERDSRLVKVAPKIKERMMKKGTTM--I 470 (510)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCEEHHCCCCCEEEEEECCCCHHHCCCCCCCHHHHHHHHHCCHHHHHHHHCCCEE--E
T ss_conf 99999999999999999872656111013787547875045866761686460366677740708799997545435--6
Q ss_pred CC-CCCCCCCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 28-88888870399962-8789999999999999999887
Q gi|254780486|r 341 RP-PTVPINTARLRISI-TLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 341 ~~-PtVp~~~~rlRi~v-~a~~t~edi~~~~~~l~~v~~E 378 (381)
.| |---+. .-+|+.+ ++..|.+|+|-+++-|....+.
T Consensus 471 ~YqPl~~~~-nffr~v~sn~a~~~ad~dflldEIerlgq~ 509 (510)
T KOG0629 471 GYQPLGDKP-NFFRMVISNPALTEADLDFLLDEIERLGQD 509 (510)
T ss_pred EECCCCCCC-CHHHEECCCCHHHHHHHHHHHHHHHHHCCC
T ss_conf 754355544-413112156101146588899999875158
No 333
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase; InterPro: IPR006233 Cystathionine beta-lyase (alternate name: beta-cystathionase) is one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys .; GO: 0004121 cystathionine beta-lyase activity, 0006520 amino acid metabolic process, 0005737 cytoplasm.
Probab=98.53 E-value=6.9e-06 Score=56.86 Aligned_cols=277 Identities=17% Similarity=0.184 Sum_probs=161.6
Q ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCC-HHHHCCHHHHHH---HHHCCCCCEEE-CCCCHHHH
Q ss_conf 89999999984012888516741660245655666316897100-454202677526---66408764030-56881478
Q gi|254780486|r 75 NQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIV-YDKLVHASIREG---INSGKAQAIAI-PHNNINSF 149 (381)
Q Consensus 75 ~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii-~D~~~HaSi~~g---~~ls~a~~~~f-~HnD~~~L 149 (381)
..+.+|.+.|+++=|.-.+.++|||.+|--..+-++.+-||+|+ +|.-.|..=... .+--+..+..| ||--++++
T Consensus 55 ~T~~ALq~a~~elEG~ag~~lyPsGlAAvT~~~LafvkaGDhvL~vdsaY~PTr~Fcd~vLkr~gv~~~YYDP~igPe~i 134 (389)
T TIGR01324 55 LTTVALQDALAELEGAAGVILYPSGLAAVTNALLAFVKAGDHVLVVDSAYKPTRRFCDIVLKRLGVEVEYYDPKIGPEDI 134 (389)
T ss_pred CHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCEEEEEECCCCCHHHH
T ss_conf 53889999999724777607624755788899998874388379864646115899988753634458872788688889
Q ss_pred HHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH--HCCEEEEECCCCCCCCCCCCCCEEEEEHHC-CCCCCC
Q ss_conf 99764310002478607971462157661346899999863--136089861311222347776401100001-346521
Q gi|254780486|r 150 AENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIAN--DYDGFIVVDEAHATGVCGPLGKGLTHIIEE-RNNVIV 226 (381)
Q Consensus 150 e~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~--~y~~~LivDEah~~Gv~G~~G~G~~~~~~~-~~~~iv 226 (381)
..++ ..++++|++|+=-|.+=.+.|+|.|+..++ ..|+++++|-.=+.|++ +-.. ++.+|=
T Consensus 135 a~Li-------~pnTkv~flEaP~S~TfE~qDIPaIakaA~kv~~g~~~miDNTWaagll---------FkpL~HgvdiS 198 (389)
T TIGR01324 135 AALI-------KPNTKVVFLEAPASLTFEVQDIPAIAKAARKVAAGVVVMIDNTWAAGLL---------FKPLEHGVDIS 198 (389)
T ss_pred HHHC-------CCCCEEEEEECCCCCEECCCCHHHHHHHHHHCCCCEEEEEECCCCCHHH---------CCCCCCCCCEE
T ss_conf 8740-------8884489983787451035884689999864189829996363020010---------23001786368
Q ss_pred CCCCCCCCCC-----EEEEEECCCCCCCCCC-CCCCCEECCCCCCCCHHHHHHHHHHHHHHC-CCHHHHHHHHHHHHHHH
Q ss_conf 0013465653-----0267524510010000-121100001357750257898878988627-10224789999999987
Q gi|254780486|r 227 MHSCSKALGS-----SGALVGSNKIIYDYLI-NYAKPFIYTTSPSPILAVVACEALKLIKRK-PALHKSLLQLINITDKI 299 (381)
Q Consensus 227 ~~TlsKa~g~-----~GG~i~~~~~ii~~l~-~~~~~~ifst~l~P~~~aaa~aal~~l~~~-~~~~~~l~~~~~~~~~~ 299 (381)
+.-..|=.++ .|..+++.+.+ +.|+ .+.-.. .....|=.+...+.-|+.|-.+ +..++.-.+.++.+++.
T Consensus 199 iqA~TKY~~GHSD~~~Gtv~an~~~w-~qL~Ge~~~~~--G~~v~~DdaYt~lRGlRTlgvRL~~Hqes~laiA~WL~eq 275 (389)
T TIGR01324 199 IQAATKYLAGHSDVLLGTVAANEDAW-EQLLGEASYLL--GQSVDADDAYTVLRGLRTLGVRLKRHQESALAIAKWLEEQ 275 (389)
T ss_pred EEECCCCCCCCCHHHHHHHHHHHHHH-HHHCCHHHHHC--CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_conf 75033557550024563477557899-87512024441--6434753488888656566432577666689999864379
Q ss_pred HHCC-----------------CCCCCCCCEEEEEEC---CHHHHHHHHHHHH--HCCE-------EEEEECC-------C
Q ss_conf 6417-----------------978998972899958---9799999999999--7791-------8986228-------8
Q gi|254780486|r 300 ANKK-----------------IGFSSQSHIQSIVIG---DNKSCLNIAKNLQ--KKGF-------DIRAIRP-------P 343 (381)
Q Consensus 300 ~~~~-----------------~g~~~~s~I~~v~~g---d~~~a~~~~~~L~--~~Gi-------~v~~i~~-------P 343 (381)
...+ -.|.+.|-+..|.+- ..+...+|-+.|+ --|+ ++.+..+ |
T Consensus 276 peVarVlHPALPs~pgH~~wkRDF~GssGlFs~vLt~~~~~k~vhaFlD~l~lFglgySWGGyESLal~~~p~e~~h~r~ 355 (389)
T TIGR01324 276 PEVARVLHPALPSDPGHELWKRDFSGSSGLFSVVLTKRLSQKEVHAFLDALKLFGLGYSWGGYESLALNVDPEELAHIRR 355 (389)
T ss_pred CCCCEEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCHHHEEEECCHHHHHCCCC
T ss_conf 96555557786228873322112255654410237479886789999878888762113000101012078666400012
Q ss_pred C--CCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 8--888870399962878999999999999999
Q gi|254780486|r 344 T--VPINTARLRISITLNVDEPTIVKLFDILPQ 374 (381)
Q Consensus 344 t--Vp~~~~rlRi~v~a~~t~edi~~~~~~l~~ 374 (381)
. +|..-+.||+.+.. |+||.+..=|+.
T Consensus 356 ~ik~~leGpLiR~hIGl----E~vddLkADl~~ 384 (389)
T TIGR01324 356 SIKRDLEGPLIRLHIGL----EDVDDLKADLKA 384 (389)
T ss_pred CCCCCCCCCEEEEEECC----CCHHHHHHHHHH
T ss_conf 27778987667897066----875789999998
No 334
>KOG1383 consensus
Probab=98.50 E-value=0.00012 Score=49.17 Aligned_cols=317 Identities=15% Similarity=0.134 Sum_probs=164.6
Q ss_pred CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHH----HHHHCCCCCEEEECCCCHHHHHH-HH--------HH
Q ss_conf 9889999999999863786887224436885899999999----84012888516741660245655-66--------63
Q gi|254780486|r 44 SSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEE----AADFFGFEKMLYFGSGYAANMAI-LS--------TL 110 (381)
Q Consensus 44 ~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~----lA~~~g~e~al~~~sG~~An~~~-i~--------~l 110 (381)
.+|+..+-..+++. +| +..-.-. ++.-.++|++ +|.+++.+.. -|++++....-. +. ..
T Consensus 92 ~~~~~~~l~~~~~~-k~--N~l~~d~----fp~~~~~e~~~Vnm~~~L~~~~~~-~~g~~t~G~Ses~l~~~k~~~~~r~ 163 (491)
T KOG1383 92 GEPELDKLIMEAYN-KF--NPLHPDE----FPVVRKLEAECVNMIANLFNAPSD-SCGCGTVGGSESGLAAKKSYRNRRK 163 (491)
T ss_pred CCCCHHHHHHHHHH-HC--CCCCCCC----CCHHHHHHHHHHHHHHHHHCCCCC-CCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 88313468999875-04--7567411----433589999999999998469964-5675544651688889899999997
Q ss_pred C-C--CCCCCCHHHHCCHHHHHHHHHCCCCCE--EECCCCH-HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHH
Q ss_conf 1-6--897100454202677526664087640--3056881-47899764310002478607971462157661346899
Q gi|254780486|r 111 P-Q--ATDLIVYDKLVHASIREGINSGKAQAI--AIPHNNI-NSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDD 184 (381)
Q Consensus 111 ~-~--~~d~ii~D~~~HaSi~~g~~ls~a~~~--~f~HnD~-~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~ 184 (381)
. + ....|+.-+.+|++....++--+-... .+.+.|. -|+.+.. +...++++.||.+-=+=-.|.+-|.++
T Consensus 164 ~~k~i~~p~iv~~~~v~~a~eK~a~yf~v~l~~V~~~~~~~~~D~~k~~----~~i~eNti~lV~~~~~~p~G~~e~ve~ 239 (491)
T KOG1383 164 AQKGIDKPNIVTPQNVHAAFEKAARYFEVELREVPLDEGDYRVDPGKVV----RMIDENTIMLVGSLPNFPTGEIEDVEK 239 (491)
T ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCCEEECHHHHH----HHHCCCEEEEEEECCCCCCCCCHHHHH
T ss_conf 4059887100215889999999876679999765036322576299999----875346379999758887673015999
Q ss_pred HHHHHHH-CCEEEEECCCCCCCCCCCCCCEEEEEHHCCCC-C--CCCCC--CCCCCCCEEEEEECCCCCCC-CCC-----
Q ss_conf 9998631-36089861311222347776401100001346-5--21001--34656530267524510010-000-----
Q gi|254780486|r 185 LVKIAND-YDGFIVVDEAHATGVCGPLGKGLTHIIEERNN-V--IVMHS--CSKALGSSGALVGSNKIIYD-YLI----- 252 (381)
Q Consensus 185 i~~l~~~-y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~-~--iv~~T--lsKa~g~~GG~i~~~~~ii~-~l~----- 252 (381)
|.+|.-+ |+.-+.||-+-| |++-+-|-.-.+.++.+.. + |-+.+ ++=+....+..+..++++.. .+.
T Consensus 240 l~~l~~e~w~ipiHvDa~~G-gFi~p~~~~~~~~fdFr~p~V~Sisa~~HKYGl~~~G~~~vl~r~k~~l~~q~~~~~~w 318 (491)
T KOG1383 240 LADLLLEIWDIPIHVDACLG-GFINPAGYLNEEEFDFRVPGVTSISADGHKYGLAPAGSSWVLYRNKELLPHQLFFHTDW 318 (491)
T ss_pred HHHHHHHHHCCCEEECCCCC-CCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCCEEEEECCCCCCCCEEEEECCC
T ss_conf 99999987277504201676-62101324575456668888114872353000130785799985666665438984254
Q ss_pred ----CCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH--HHHHHHHHHHHHHHHHCCCCCC-CCCCEEEEEECC--HHHH
Q ss_conf ----121100001357750257898878988627102--2478999999998764179789-989728999589--7999
Q gi|254780486|r 253 ----NYAKPFIYTTSPSPILAVVACEALKLIKRKPAL--HKSLLQLINITDKIANKKIGFS-SQSHIQSIVIGD--NKSC 323 (381)
Q Consensus 253 ----~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~--~~~l~~~~~~~~~~~~~~~g~~-~~s~I~~v~~gd--~~~a 323 (381)
+-+++.-||-+ -...++.-+++--+-.+..+ -++..++.+.+.+.....-++. -.-|-+++..-+ ...-
T Consensus 319 ~Gg~y~s~TlngSR~--g~~va~~wa~~~~lG~eGY~~~~~~ive~~~~l~egie~i~~i~i~gkp~vs~~~~~s~~~~i 396 (491)
T KOG1383 319 LGGIYASPTLNGSRP--GSQVAAQWAALMSLGEEGYRENTQNIVETARKLREGIENIKGIKIVGKPLVSFILFGSNDVNI 396 (491)
T ss_pred CCCCCCCCCCCCCCC--CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEECCCCCCCC
T ss_conf 676556752125785--128999999999861788999999999999999986543556133278737999716876531
Q ss_pred HHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHH-HHHHHHHHHHHHHHHCC
Q ss_conf 99999999779189862288888887039996287899999-99999999999887387
Q gi|254780486|r 324 LNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPT-IVKLFDILPQIISEGNS 381 (381)
Q Consensus 324 ~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~ed-i~~~~~~l~~v~~E~~s 381 (381)
.++.+.|.+.|+.+..-.+|+ -+-+|++..|+.++ .|+++.-|++++.|+.+
T Consensus 397 ~elsd~l~~~GW~lnalq~P~------a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el~~ 449 (491)
T KOG1383 397 FELSDLLRKKGWILNALQFPA------AIHICVTRVHAREDVADRFVADIRKVVEELKS 449 (491)
T ss_pred EEHHHHHHHCCCCCCCCCCCC------CEEEEEEEEECCHHHHHHHHHHHHHHHHHHHH
T ss_conf 114578986386766567887------21689886413588899999999999999984
No 335
>TIGR00474 selA L-seryl-tRNA selenium transferase; InterPro: IPR004534 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homolog of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N-terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pyloriputative SelA.; GO: 0004125 L-seryl-tRNASec selenium transferase activity, 0001514 selenocysteine incorporation, 0005737 cytoplasm.
Probab=98.43 E-value=9e-07 Score=62.37 Aligned_cols=230 Identities=18% Similarity=0.190 Sum_probs=136.8
Q ss_pred CCCCCCCC-CHHHHHHHHHHHHH----HCCCCC-C-CCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHH
Q ss_conf 46566779-88999999999986----378688-7-22443688589999999984012888516741660245655666
Q gi|254780486|r 37 HDYLALSS-STLLREKILSSLDS----KIPIGS-G-GSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILST 109 (381)
Q Consensus 37 ~dYLGl~~-~p~v~~a~~~a~~~----~~g~~~-~-~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~ 109 (381)
|-|||=+- ..++.+++.+++.. .|++-- + |+| +. .+|+.|+++.|.|++.+++.-..|.+-++.+
T Consensus 71 nTnlGra~~ae~v~~a~~~~~~~~v~LEY~L~~~gRG~R------~~--~i~~lLc~lTgae~~cvvnNna~avlL~l~~ 142 (448)
T TIGR00474 71 NTNLGRALFAEAVNEAISEAMRKYVNLEYDLDEGGRGHR------DA--HIEKLLCKLTGAEDACVVNNNAAAVLLMLAT 142 (448)
T ss_pred EHHHCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCCCHH------HH--HHHHHHHHHCCCCCCEEEECHHHHHHHHHHH
T ss_conf 300144367999999999986257753110211575317------89--9999987532862330442338999999999
Q ss_pred HCCCCCCCCH-HHHC-CHHHHHH---HHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCE--EEECCCCCCCCCHHH-
Q ss_conf 3168971004-5420-2677526---664087640305688147899764310002478607--971462157661346-
Q gi|254780486|r 110 LPQATDLIVY-DKLV-HASIREG---INSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPW--IVVESIYSMDGDKAP- 181 (381)
Q Consensus 110 l~~~~d~ii~-D~~~-HaSi~~g---~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~--vv~egv~Sm~G~~ap- 181 (381)
++++..+|++ -|+. |.|...- ++-+++...-+---+ ..+.+-++..--..+.+ +|=.+=|+|.|-...
T Consensus 143 ~a~GKeVi~srGEL~eiGg~fRipdim~~~g~~l~eVGttn----~t~~~Dy~~ai~~nTa~Lmkvh~sNf~~~gft~~~ 218 (448)
T TIGR00474 143 LAKGKEVIISRGELVEIGGAFRIPDIMKQAGCELDEVGTTN----RTHVKDYRVAITENTALLMKVHLSNFKIVGFTAKV 218 (448)
T ss_pred HCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCEEEECCCHH----HHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCC
T ss_conf 60798799978865789875654488965385651011012----00044677765310344444430166256521115
Q ss_pred -HHHHHHHHHHCCEEEEECCCCCCCC-CCCCCCEEEEE--HH--CCCCCCCCCCCCCCCCC-EEEEEECCCCCCCCCCCC
Q ss_conf -8999998631360898613112223-47776401100--00--13465210013465653-026752451001000012
Q gi|254780486|r 182 -LDDLVKIANDYDGFIVVDEAHATGV-CGPLGKGLTHI--IE--ERNNVIVMHSCSKALGS-SGALVGSNKIIYDYLINY 254 (381)
Q Consensus 182 -L~~i~~l~~~y~~~LivDEah~~Gv-~G~~G~G~~~~--~~--~~~~~iv~~TlsKa~g~-~GG~i~~~~~ii~~l~~~ 254 (381)
..+|++|=++||+..++|.+=|.-| +-+.|-..-+. .+ -...++|++|==|=+|+ .||.|+|.|++|+.|..+
T Consensus 219 ~eeeLv~LG~~~~~pv~~D~gSG~LvdL~~~gL~~~eP~~~~~i~~G~dLVs~SgDKLLgGpqaGiivGKKeli~ki~~~ 298 (448)
T TIGR00474 219 KEEELVKLGKELDVPVVTDLGSGLLVDLSQYGLPKNEPNVQEAIALGVDLVSFSGDKLLGGPQAGIIVGKKELIEKIQIH 298 (448)
T ss_pred CHHHHHHHHHHCCCEEEEECCCCCHHHHHHCCCCCCCCCCCHHHHCCCCEEECCCCCCCCCCCCCEEECCHHHHHHHHHC
T ss_conf 77899973223377079987766212254416666889710688669857861651004676503462307899998547
Q ss_pred CCCEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf 11000013577502578988789886
Q gi|254780486|r 255 AKPFIYTTSPSPILAVVACEALKLIK 280 (381)
Q Consensus 255 ~~~~ifst~l~P~~~aaa~aal~~l~ 280 (381)
. .-|.=-..|+..|+.-++|++.-
T Consensus 299 p--~kr~Lr~dk~~LAGle~tLkly~ 322 (448)
T TIGR00474 299 P--LKRALRADKLTLAGLEATLKLYL 322 (448)
T ss_pred C--CCEEHHCCHHHHHHHHHHHHHHC
T ss_conf 8--62210124167999999997415
No 336
>PRK12566 glycine dehydrogenase; Provisional
Probab=98.41 E-value=0.00017 Score=48.13 Aligned_cols=301 Identities=13% Similarity=0.174 Sum_probs=147.5
Q ss_pred CCCCCCCCHHHHHHHH-HHHHH--HCCCCCC--CCCCCCCCCHHHHHHHHHHHHHCCCC--CEEEECCCCHHHHHHHHHH
Q ss_conf 6566779889999999-99986--3786887--22443688589999999984012888--5167416602456556663
Q gi|254780486|r 38 DYLALSSSTLLREKIL-SSLDS--KIPIGSG--GSRLLCGNYNQHLELEEEAADFFGFE--KMLYFGSGYAANMAILSTL 110 (381)
Q Consensus 38 dYLGl~~~p~v~~a~~-~a~~~--~~g~~~~--~sr~~~G~~~~~~~lE~~lA~~~g~e--~al~~~sG~~An~~~i~~l 110 (381)
+|+|..-++-++.+++ +.+.. .|-+... -+-.--|..+..-+.-.-++++.|.| .|-++--++.+..+...+.
T Consensus 82 sfIG~Gyy~t~tP~vI~Rnvlenp~wyTaYTPYQpEISQGrLeaL~nfQTmi~dLTGm~vaNASllDeaTAaAEAm~ma~ 161 (954)
T PRK12566 82 SLIGMGYHGTVTPTVILRNVLENPGWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAAEAMALAK 161 (954)
T ss_pred CEECCCCCCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHH
T ss_conf 23017767884756777753048875047799864676699999999999999987876005760008999999999989
Q ss_pred --C-CCCCCCCHHHHCCHHHHHHHH----HCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHH
Q ss_conf --1-689710045420267752666----408764030568814789976431000247860797146215766134689
Q gi|254780486|r 111 --P-QATDLIVYDKLVHASIREGIN----SGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLD 183 (381)
Q Consensus 111 --~-~~~d~ii~D~~~HaSi~~g~~----ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~ 183 (381)
. ++.+.++.|+.+|...++=++ .-+..++. .|++++. . .+ ..-+++.- -...|.+-++.
T Consensus 162 r~~k~k~~~~~V~~~~~Pqt~~Vl~tra~~~gie~vv---~~~~~~~----~-----~~-~~gvlvqy-P~~~G~i~d~~ 227 (954)
T PRK12566 162 RVAKSKSNRFFVDEHCHPQTLSVLKTRAEGFGFELVV---DEVDNLA----Q-----HA-VFGALLQY-PDTHGEVRDLR 227 (954)
T ss_pred HHHCCCCCEEEECCCCCHHHHHHHHHCCCCCCCEEEE---CCHHHCC----C-----CC-EEEEEEEC-CCCCCCCCCCH
T ss_conf 8753688879988987888999999603357957996---3867667----6-----67-58999978-99887614756
Q ss_pred HHHHHHHHCCEEEEECC-CCCCCCCCCCCCEEEEEHHCCCCCCCCCC---CCCCCCCEE---EEEECCCCCCCCCCCCCC
Q ss_conf 99998631360898613-11222347776401100001346521001---346565302---675245100100001211
Q gi|254780486|r 184 DLVKIANDYDGFIVVDE-AHATGVCGPLGKGLTHIIEERNNVIVMHS---CSKALGSSG---ALVGSNKIIYDYLINYAK 256 (381)
Q Consensus 184 ~i~~l~~~y~~~LivDE-ah~~Gv~G~~G~G~~~~~~~~~~~iv~~T---lsKa~g~~G---G~i~~~~~ii~~l~~~~~ 256 (381)
++.+.+++.|++++|.- --+++++ ..-|....+|++|+ |+-.+|-.| ||.++++++...+ +
T Consensus 228 ~~~~~ah~~gal~iv~~D~laL~lL--------k~PGe~GADIavG~~QrfGvPmgfGGPhagffAtr~~~kR~m----P 295 (954)
T PRK12566 228 PLIDQLHGQQALACVAADLLSLLLL--------TPPGELGADVVLGSTQRFGVPMGYGGPHAAFFACRDDYKRAM----P 295 (954)
T ss_pred HHHHHHHHCCCEEEEEHHHHHHHCC--------CCHHHCCCCEEEEECCCCCCCCCCCCCCEEEEEEHHHHHCCC----C
T ss_conf 7898773459289986567687704--------983441875798406636765567887502335724465359----9
Q ss_pred CEECC----CCCCCCHHHHHHHHHHHHH-------------------------HCCCH----HHHHHHHHHHHHHHHHCC
Q ss_conf 00001----3577502578988789886-------------------------27102----247899999999876417
Q gi|254780486|r 257 PFIYT----TSPSPILAVVACEALKLIK-------------------------RKPAL----HKSLLQLINITDKIANKK 303 (381)
Q Consensus 257 ~~ifs----t~l~P~~~aaa~aal~~l~-------------------------~~~~~----~~~l~~~~~~~~~~~~~~ 303 (381)
+-+-. ....|...-+..+.=++|+ ..|+- .++.+.....+.. .++.
T Consensus 296 GRiVGvS~D~~G~~a~rlaLQTREQHIRReKATSNICTaQaLLA~mAamYAvYHGPeGLk~IA~rih~~a~~la~-~L~~ 374 (954)
T PRK12566 296 GRIIGVSRDARGNTALRMALQTREQHIRREKANSNICTAQVLLANIAGFYAVYHGPEGLKRIAQRVHRLTAILAA-GLEA 374 (954)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_conf 743403777997951322133689999862010000277899999999999871999999999999999999999-9987
Q ss_pred CCCC--CCCCE--EEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHH
Q ss_conf 9789--98972--89995897999999999997791898622888888870399962878999999999999999
Q gi|254780486|r 304 IGFS--SQSHI--QSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQ 374 (381)
Q Consensus 304 ~g~~--~~s~I--~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~ 374 (381)
.|+. ...-. +.|.+++. ...+.++.+++||..+.+ ....+.|++.=..|.+|++.+++++..
T Consensus 375 ~G~~v~~~~fFDTl~v~~~~~--~~~i~~~A~~~~iNlR~~-------d~~~vgISlDEttt~~dl~~Ll~vF~~ 440 (954)
T PRK12566 375 KGIKRLNRHFFDTLTLEVGGA--QAAIIESAEAAQINLRIL-------GRGRLGLSLDETCDEATVARLFDIFLG 440 (954)
T ss_pred CCCEECCCCEEEEEEEECCCC--HHHHHHHHHHCCCEEEEE-------CCCEEEEEECCCCCHHHHHHHHHHHHC
T ss_conf 797125786156799964864--999999999779747871-------699799980566889999999999835
No 337
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=98.40 E-value=5.2e-05 Score=51.35 Aligned_cols=326 Identities=14% Similarity=0.189 Sum_probs=159.4
Q ss_pred EEEECCCCCCCCCC---C-CHHHHHHHHHHHHHHCCCCCCCCC--C-------CCCCCHHHHHHHHHHH----HHCC---
Q ss_conf 68980344656677---9-889999999999863786887224--4-------3688589999999984----0128---
Q gi|254780486|r 30 DIWDFTSHDYLALS---S-STLLREKILSSLDSKIPIGSGGSR--L-------LCGNYNQHLELEEEAA----DFFG--- 89 (381)
Q Consensus 30 ~~l~f~s~dYLGl~---~-~p~v~~a~~~a~~~~~g~~~~~sr--~-------~~G~~~~~~~lE~~lA----~~~g--- 89 (381)
++--+-|||+++=. - .-.|.-..+.. |.|+++-|--| - -.|.+-+ ..|-..+. +..|
T Consensus 46 ~Ls~mDsNNf~~~vgvGEREgRv~s~LV~r--rhy~f~HGIGRSGdl~~~QPKAaGSSll-~kLTn~l~ld~lr~~G~~s 122 (444)
T TIGR03531 46 ELSVMDTNNFPNNVGVGEREGRVFSKLVER--RHYGFCHGIGRSGDLVAPQPKAAGSSLL-YKLTNKLVKDFLKLLGLRS 122 (444)
T ss_pred HHHHHCCCCCCCCCCCCCCHHHHHHHHHHH--HHCCCCCCCCCCCCCCCCCCCCCCHHHH-HHHHHHHHHHHHHHCCCCC
T ss_conf 997413268844477552057787799997--6037666778755546568776232899-9999999999999839853
Q ss_pred CCCEEEECCCCHHHHHH-HHHHCC---CCCCCCHHHHCCHHHHHHHHHCCCCCEEEC--------CCCHHHHHHHHHHHH
Q ss_conf 88516741660245655-666316---897100454202677526664087640305--------688147899764310
Q gi|254780486|r 90 FEKMLYFGSGYAANMAI-LSTLPQ---ATDLIVYDKLVHASIREGINSGKAQAIAIP--------HNNINSFAENINKWR 157 (381)
Q Consensus 90 ~e~al~~~sG~~An~~~-i~~l~~---~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~--------HnD~~~Le~~l~~~~ 157 (381)
...|+++|..+.--+++ +.+|-+ ....|++-+--|-|-+..+..++-+-+... +-|++++|+.+++..
T Consensus 123 ~~~~~vvP~ATGMsL~LcL~alr~~rp~a~yViw~RiDQKSc~K~i~~AGl~pivie~~l~gd~l~tdv~~ie~~i~~~g 202 (444)
T TIGR03531 123 VKSAIVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCIKAISTAGLEPRVIETVLDGDRLTTDVEDIERAIEEIG 202 (444)
T ss_pred CCCEEEEECCCCCHHHHHHHHHHCCCCCCCEEEEECCCCCCHHHHHHHCCCEEEEEEEEECCCEEECCHHHHHHHHHHHC
T ss_conf 26579962534518999999985018899889985355532688998659727997407518877469999999999828
Q ss_pred HCCCCCCCEEEECCCCCCCCCHHH-----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHH----CCCCCCCCC
Q ss_conf 002478607971462157661346-----89999986313608986131122234777640110000----134652100
Q gi|254780486|r 158 KSGGKGFPWIVVESIYSMDGDKAP-----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIE----ERNNVIVMH 228 (381)
Q Consensus 158 ~~~~~~~~~vv~egv~Sm~G~~ap-----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~----~~~~~iv~~ 228 (381)
. +...+| +|...-+|| +.+|.+||++|+.-=+|.-|+|+ +-.-+++... .-..+.++.
T Consensus 203 ~---~~i~cV-----lSTTScFAPR~~D~i~eiAklC~~~~IpHvVNNAYGl-----Q~~~~~~~i~~A~r~GRVDa~VQ 269 (444)
T TIGR03531 203 P---ENILCV-----LSTTSCFAPRSPDDIEEIAKICAKYDIPHVVNNAYGL-----QSNKYMEKINKAIKVGRVDAVVS 269 (444)
T ss_pred C---CCEEEE-----EECCCCCCCCCCCCHHHHHHHHHHCCCCEEECCHHHH-----HHHHHHHHHHHHHHCCCCEEEEE
T ss_conf 6---764799-----8536545999976699999999974998378420366-----17999999999986498319997
Q ss_pred CCCCCCCC-EE-EEEEC-CCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHH--------HHHHHCCCHHHHHHHHHHHHH
Q ss_conf 13465653-02-67524-510010000121100001357750257898878--------988627102247899999999
Q gi|254780486|r 229 SCSKALGS-SG-ALVGS-NKIIYDYLINYAKPFIYTTSPSPILAVVACEAL--------KLIKRKPALHKSLLQLINITD 297 (381)
Q Consensus 229 TlsKa~g~-~G-G~i~~-~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal--------~~l~~~~~~~~~l~~~~~~~~ 297 (381)
|.-|-|=. .| |.|++ ++++++.+. ..|-.-.+.+|.+= .-..-| ++++++.+..+.+.+....+.
T Consensus 270 StDKNflVPVGGaII~s~d~~~i~~is---~~YPGRAS~sp~lD-lfITLLslG~~gy~~Ll~eRke~~~~l~~~L~~~a 345 (444)
T TIGR03531 270 STDKNFMVPVGGAIIYSFDENFIQEIS---KSYPGRASASPSLD-VLITLLSMGSKGYLELLKERKEMYKYLKELLQKLA 345 (444)
T ss_pred ECCCCEEEECCCEEEEECCHHHHHHHH---HCCCCCCCCCHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 068662543487489718889999998---41899777740799-99999997488899999999999999999999999
Q ss_pred -HHHHCCCCCCCCCCEEEEE-E--CCHHHHHHHHHHHHHCCEEEEEECCCCCCC--C---------------CCEEEEEC
Q ss_conf -8764179789989728999-5--897999999999997791898622888888--8---------------70399962
Q gi|254780486|r 298 -KIANKKIGFSSQSHIQSIV-I--GDNKSCLNIAKNLQKKGFDIRAIRPPTVPI--N---------------TARLRISI 356 (381)
Q Consensus 298 -~~~~~~~g~~~~s~I~~v~-~--gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~--~---------------~~rlRi~v 356 (381)
+...+.+. ....||-.-+ + -++.....+...|+.|++--.-+..|...+ + .+.|-+.-
T Consensus 346 ~~~gerlL~-t~~N~IS~aitl~~l~~~~~t~lGsmLf~r~VsG~RVV~~~~~k~i~g~~F~~~gsh~~~yp~~Ylt~aa 424 (444)
T TIGR03531 346 ERHGERLLD-VPENPISSAMTLNTLRPKDPTMLGSMLYSRRVTGPRVVTNGDSKTVGGCEFKGYGSHTSNYPCPYITAAA 424 (444)
T ss_pred HHHCCEECC-CCCCCEEEEEECCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCEEECCEEEECCCCCCCCCCCHHHHHHH
T ss_conf 982987214-8999505778736678767899999997368875617758997388787750677776778525799888
Q ss_pred CCCCCHHHHHHHHHHHHHHH
Q ss_conf 87899999999999999998
Q gi|254780486|r 357 TLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 357 ~a~~t~edi~~~~~~l~~v~ 376 (381)
....+++|+|.+++.|++++
T Consensus 425 aIG~~~~dvd~f~~rLdk~l 444 (444)
T TIGR03531 425 AIGMTKEDVDTFVSRLEKSL 444 (444)
T ss_pred HHCCCHHHHHHHHHHHHHCC
T ss_conf 81885899999999986149
No 338
>PRK05367 glycine dehydrogenase; Provisional
Probab=98.40 E-value=7.4e-05 Score=50.43 Aligned_cols=305 Identities=13% Similarity=0.155 Sum_probs=149.8
Q ss_pred CCCCCCCCHHHHHHHHH-HHHH--HCCCCC--CCCCCCCCCCHHHHHHHHHHHHHCCCC--CEEEECCCCHHHHHHHHHH
Q ss_conf 65667798899999999-9986--378688--722443688589999999984012888--5167416602456556663
Q gi|254780486|r 38 DYLALSSSTLLREKILS-SLDS--KIPIGS--GGSRLLCGNYNQHLELEEEAADFFGFE--KMLYFGSGYAANMAILSTL 110 (381)
Q Consensus 38 dYLGl~~~p~v~~a~~~-a~~~--~~g~~~--~~sr~~~G~~~~~~~lE~~lA~~~g~e--~al~~~sG~~An~~~i~~l 110 (381)
+|+|..-++-++.+++. .+.. .|-+.. .-+-.--|.....-+...-++++.|.| .|-++--++.+..+...+.
T Consensus 83 sfIG~Gyy~t~~P~VI~Rnilenp~WYTaYTPYQpEiSQGrLeal~nfQtmi~dLTGm~vaNASllDeaTAaaEAm~ma~ 162 (955)
T PRK05367 83 SYIGQGYYGTHTPPVILRNVLENPAWYTAYTPYQPEISQGRLEALLNFQTMVCDLTGLPIANASLLDEATAAAEAMALAK 162 (955)
T ss_pred CCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 10347766875752002045358886457799765776689999999999999986876004321018999999999998
Q ss_pred --C-CCCCCCCHHHHCCHHHHHHHH----HCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHH
Q ss_conf --1-689710045420267752666----408764030568814789976431000247860797146215766134689
Q gi|254780486|r 111 --P-QATDLIVYDKLVHASIREGIN----SGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLD 183 (381)
Q Consensus 111 --~-~~~d~ii~D~~~HaSi~~g~~----ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~ 183 (381)
. ++...++.|+.+|.-.++=++ .-+..++...+.+. .. .....-+++.-- ...|.+-++.
T Consensus 163 r~~k~k~~~~~V~~~~~Pqt~~Vl~Tra~~~giei~v~d~~~~------~~------~~d~~gvlvQyP-~~~G~i~D~~ 229 (955)
T PRK05367 163 RVSKSKSNRFFVDDDVHPQTLDVVRTRAEPLGIEVVVGDAAEA------LD------HDDVFGVLLQYP-GTSGEVRDYR 229 (955)
T ss_pred HHHCCCCCEEEECCCCCHHHHHHHHHHCCCCCCEEEEECHHHC------CC------CCCEEEEEEECC-CCCCCCCCHH
T ss_conf 8622688879988987863899999605357977999575656------77------677799999789-9888717879
Q ss_pred HHHHHHHHCCEEEEEC-CCCCCCCCCCCCCEEEEEHHCCCCCCCCCC---CCCCCCCEE---EEEECCCCCCCCCC----
Q ss_conf 9999863136089861-311222347776401100001346521001---346565302---67524510010000----
Q gi|254780486|r 184 DLVKIANDYDGFIVVD-EAHATGVCGPLGKGLTHIIEERNNVIVMHS---CSKALGSSG---ALVGSNKIIYDYLI---- 252 (381)
Q Consensus 184 ~i~~l~~~y~~~LivD-Eah~~Gv~G~~G~G~~~~~~~~~~~iv~~T---lsKa~g~~G---G~i~~~~~ii~~l~---- 252 (381)
++.+.+++.|++++|- |--+++++ ..-|....+|++|+ |+=.+|-.| ||.+++++++..+-
T Consensus 230 ~~~~~ah~~gal~iv~~D~laL~lL--------kpPGe~GADIaVGs~QrfGvPmgfGGPhagffA~~~~~~R~mPGRiV 301 (955)
T PRK05367 230 ALIAAAHAAGALVAVAADLLALTLL--------TPPGEMGADIAVGSAQRFGVPMGFGGPHAAYFATRDAYKRSMPGRIV 301 (955)
T ss_pred HHHHHHHHCCCEEEEECCHHHHHCC--------CCHHHCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCEE
T ss_conf 9999997659789997466677523--------89666387679731666677766788653788863664158997534
Q ss_pred -------------------------CCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCH----HHHHHHHHHHHHHHHHCC
Q ss_conf -------------------------121100001357750257898878988627102----247899999999876417
Q gi|254780486|r 253 -------------------------NYAKPFIYTTSPSPILAVVACEALKLIKRKPAL----HKSLLQLINITDKIANKK 303 (381)
Q Consensus 253 -------------------------~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~----~~~l~~~~~~~~~~~~~~ 303 (381)
.++.+.|-|+ .+.. |..+++=-+-..|+- .++.......+.. ..+.
T Consensus 302 G~S~D~~G~~ayrlaLQTREQHIRReKATSNICTa---QaLL-A~mA~~YAvYHGP~GLk~IA~rih~~a~~la~-~l~~ 376 (955)
T PRK05367 302 GVSVDAAGNPALRLALQTREQHIRREKATSNICTA---QVLL-AVMASMYAVYHGPEGLKAIARRVHRLTAILAA-GLKA 376 (955)
T ss_pred EEEECCCCCEEEEEEHHHHHHHHHHHHHHHHHHHH---HHHH-HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH-HHHH
T ss_conf 03665896975553001489998765201011477---8999-99998896300899999999999999999999-9997
Q ss_pred CCCC--CCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 9789--98972899958979999999999977918986228888888703999628789999999999999999
Q gi|254780486|r 304 IGFS--SQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 304 ~g~~--~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
.|+. ...-.-.+.+..+..+.++..+..++||.++.+ ....+.|++.=.+|.+|++.+++++...
T Consensus 377 ~G~~v~~~~fFDTl~v~~~~~a~~i~~~A~~~giNlr~~-------d~~~v~iSlDEttt~~dl~~l~~~f~~~ 443 (955)
T PRK05367 377 LGFKLVHDSFFDTLTVEVGGDAAAILARALAAGINLRRV-------DDDAVGISLDETTTREDVAALLSVFGDG 443 (955)
T ss_pred CCCCCCCCCCEEEEEEECCCCHHHHHHHHHHCCCEEEEE-------CCCEEEEEECCCCCHHHHHHHHHHHHCC
T ss_conf 898445787102799965855999999999769728983-------6996999935879999999999997132
No 339
>KOG0258 consensus
Probab=98.34 E-value=8.9e-05 Score=49.93 Aligned_cols=332 Identities=17% Similarity=0.152 Sum_probs=160.7
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCC-------CCEEEECCCCHHHH-HH
Q ss_conf 34465667798899999999998637868872244368858999999998401288-------85167416602456-55
Q gi|254780486|r 35 TSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGF-------EKMLYFGSGYAANM-AI 106 (381)
Q Consensus 35 ~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~-------e~al~~~sG~~An~-~~ 106 (381)
+-|.|=-|-.+|++-..+++... ++--..+||-.-+-.+.-..-+-+.+|+|..+ +.-++..+|..... .+
T Consensus 74 al~~~p~lLd~~~fp~Dai~RA~-~~L~~~gGs~GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~i 152 (475)
T KOG0258 74 ALCQYPELLDSPEFPTDAIKRAK-RILNDCGGSLGAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSI 152 (475)
T ss_pred HHHCCHHHCCCCCCCHHHHHHHH-HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHEEECCCCCHHHHHH
T ss_conf 99547433078889768999999-99975687645530245773689999999885268989877755327885899999
Q ss_pred HHHHC-CCCCCCCHH----HHCCHHHHHHHHHCCCCCEEE-------CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCC
Q ss_conf 66631-689710045----420267752666408764030-------568814789976431000247860797146215
Q gi|254780486|r 107 LSTLP-QATDLIVYD----KLVHASIREGINSGKAQAIAI-------PHNNINSFAENINKWRKSGGKGFPWIVVESIYS 174 (381)
Q Consensus 107 i~~l~-~~~d~ii~D----~~~HaSi~~g~~ls~a~~~~f-------~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~S 174 (381)
+..++ ++.|-|++- .+.-|+| .+-++..+.| .-.|.+.|++.+.+++ ++-+.+.+||+..=..
T Consensus 153 l~l~~~~~~~GvliPiPQYPLYsAti----~l~~~~~v~YyLdEe~~W~ld~~el~~~~~eA~-k~i~~r~lvvINPGNP 227 (475)
T KOG0258 153 LSLLIAGKKTGVLIPIPQYPLYSATI----SLLGGTQVPYYLDEESNWSLDVAELERSVDEAR-KGINPRALVVINPGNP 227 (475)
T ss_pred HHHHHCCCCCCEEEECCCCCHHHHHH----HHHCCCCCCEEECCCCCCCCCHHHHHHHHHHHH-CCCCCEEEEEECCCCC
T ss_conf 99996589870375268774048889----972883354354334477788999999999986-1688418999779996
Q ss_pred CCCCH---HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCE-----EEEEHH-CCC-CC--CCCCCCCCCCCC----EE
Q ss_conf 76613---4689999986313608986131122234777640-----110000-134-65--210013465653----02
Q gi|254780486|r 175 MDGDK---APLDDLVKIANDYDGFIVVDEAHATGVCGPLGKG-----LTHIIE-ERN-NV--IVMHSCSKALGS----SG 238 (381)
Q Consensus 175 m~G~~---apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G-----~~~~~~-~~~-~~--iv~~TlsKa~g~----~G 238 (381)
+|-+ ..+.+|...|.+++.+|+-||++---+|-+.-+. +....+ ..+ ++ +-.++.||++-. .|
T Consensus 228 -TGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RG 306 (475)
T KOG0258 228 -TGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVYTTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRG 306 (475)
T ss_pred -CCHHHCHHHHHHHHHHHHHCCCEEECHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCEEEECCCC
T ss_conf -1145068779999999987370773268887632578760274999999846867785577661035522112305567
Q ss_pred EEE--EC-CCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHH------------HHHH-HCCCHHHHHHHHHHHHHHHHHC
Q ss_conf 675--24-510010000121100001357750257898878------------9886-2710224789999999987641
Q gi|254780486|r 239 ALV--GS-NKIIYDYLINYAKPFIYTTSPSPILAVVACEAL------------KLIK-RKPALHKSLLQLINITDKIANK 302 (381)
Q Consensus 239 G~i--~~-~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal------------~~l~-~~~~~~~~l~~~~~~~~~~~~~ 302 (381)
||. +. ++++.+.+.... |..+-|.+...+...+ +.-. +.+.....++..+++.....+.
T Consensus 307 GYmEv~n~~prv~~qi~Kl~-----si~lc~~V~GQ~~vdl~VnPP~Pgd~Sy~~~~~Ekd~il~~l~~ra~l~~~~~ns 381 (475)
T KOG0258 307 GYMESLNRDPRVKQQIKKLA-----SIKLCPQVSGQKLVDLVVNPPKPGDPSYDLFSSEKDGILSSLRSRAKLTEDAFNS 381 (475)
T ss_pred CEEECCCCCHHHHHHHHHHH-----HHHHCCCCCCHHHHCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 73211058827877789887-----5641667532253320158999998426666666676899998762889998750
Q ss_pred CCCCCC---CCCEEEE-EECCHHHHHH------------HHHHHHHC-CEEEEEECCCCCCCCCCEEEEECCCCCCHHHH
Q ss_conf 797899---8972899-9589799999------------99999977-91898622888888870399962878999999
Q gi|254780486|r 303 KIGFSS---QSHIQSI-VIGDNKSCLN------------IAKNLQKK-GFDIRAIRPPTVPINTARLRISITLNVDEPTI 365 (381)
Q Consensus 303 ~~g~~~---~s~I~~v-~~gd~~~a~~------------~~~~L~~~-Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi 365 (381)
.-|+.. +.....+ .+.-|.++.+ .+.+|++. ||.+.|-.==--+.|+--+|.++-+--+ +-|
T Consensus 382 ~~gi~cn~~qGAMY~fP~i~lP~kaie~A~~~~~~PD~FYc~~LLe~tGIcvVPGSGFGQ~~GtyH~R~TiLp~~~-~~i 460 (475)
T KOG0258 382 LEGISCNPVQGAMYLFPQISLPPKAIEAAKALGIAPDEFYCLKLLEATGICVVPGSGFGQKEGTYHFRTTILPPGL-EII 460 (475)
T ss_pred CCCEEECCCCCCEEECCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCEEEEEEEECCCHH-HHH
T ss_conf 5764632676223534534678889999997089970899999997657588348877889850488886257065-999
Q ss_pred HHHHHHHHHHHHHH
Q ss_conf 99999999998873
Q gi|254780486|r 366 VKLFDILPQIISEG 379 (381)
Q Consensus 366 ~~~~~~l~~v~~E~ 379 (381)
+++.+.=.+.++|.
T Consensus 461 ~~~~~fH~~f~~~Y 474 (475)
T KOG0258 461 EKFKKFHAEFMDEY 474 (475)
T ss_pred HHHHHHHHHHHHHH
T ss_conf 99999999999740
No 340
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=98.25 E-value=0.00048 Score=45.36 Aligned_cols=307 Identities=15% Similarity=0.192 Sum_probs=153.0
Q ss_pred CCCC-CHHHHHHHHHHHHHHCCCCCCCCCC-CCC----CCHHHHHHHHHHHHHCCCC---CEEEECCCCHHHHHHHH-HH
Q ss_conf 6779-8899999999998637868872244-368----8589999999984012888---51674166024565566-63
Q gi|254780486|r 41 ALSS-STLLREKILSSLDSKIPIGSGGSRL-LCG----NYNQHLELEEEAADFFGFE---KMLYFGSGYAANMAILS-TL 110 (381)
Q Consensus 41 Gl~~-~p~v~~a~~~a~~~~~g~~~~~sr~-~~G----~~~~~~~lE~~lA~~~g~e---~al~~~sG~~An~~~i~-~l 110 (381)
|=+. -++|.+.+++.+...-|.|.+ -+ ++- ...++.+.|+.|.++++-| +.++++.|-....+.++ .|
T Consensus 6 GPa~lp~~Vl~~~~~e~~~~~~~G~s--ile~SHRs~~f~~i~~~a~~~lr~Ll~iPd~Y~Vlfl~GGat~qf~~ip~Nl 83 (355)
T cd00611 6 GPAALPEEVLEQAQKELLDFNGLGMS--VMEMSHRSKDFEAIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNL 83 (355)
T ss_pred CCCCCCHHHHHHHHHHHHCCCCCCCE--EEECCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHH
T ss_conf 87658999999999997542688601--5512668878999999999999998489998089995784499999999851
Q ss_pred CCCCC---CCCHHHHCCHHHHHHHHHCCCCCEEE-C-CCCHHHHHHHHHHHHHCCCCCCCEEE-E--CCCCCCCCCHHHH
Q ss_conf 16897---10045420267752666408764030-5-68814789976431000247860797-1--4621576613468
Q gi|254780486|r 111 PQATD---LIVYDKLVHASIREGINSGKAQAIAI-P-HNNINSFAENINKWRKSGGKGFPWIV-V--ESIYSMDGDKAPL 182 (381)
Q Consensus 111 ~~~~d---~ii~D~~~HaSi~~g~~ls~a~~~~f-~-HnD~~~Le~~l~~~~~~~~~~~~~vv-~--egv~Sm~G~~apL 182 (381)
.+++. ++..-.-+...+.++.+......+.- . ..+...+... ..... .+...++. + |.++ |.
T Consensus 84 l~~~~~a~y~~tG~ws~ka~~eA~~~~~~~~i~~~~~~~~~~~iP~~-~~~~~--~~~~~yvh~t~NETi~---Gv---- 153 (355)
T cd00611 84 LGDKGTADYVVTGAWSAKAAKEAKRYGGVVVIVAAKEEGKYTKIPDV-ETWDL--APDAAYVHYCSNETIH---GV---- 153 (355)
T ss_pred CCCCCCEEEEEECCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCH-HHCCC--CCCCCEEEEEECCCCC---CE----
T ss_conf 47887058997372689999999874677410366566787768993-43278--8877779993257753---43----
Q ss_pred HHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE-EEEECCCCCCCCCCCCCCCE---
Q ss_conf 99999863136089861311222347776401100001346521001346565302-67524510010000121100---
Q gi|254780486|r 183 DDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG-ALVGSNKIIYDYLINYAKPF--- 258 (381)
Q Consensus 183 ~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G-G~i~~~~~ii~~l~~~~~~~--- 258 (381)
++.++.+..+..|++|=+=+++ + ..++...-+++..+--|.||..| .++.-++++++.....-|++
T Consensus 154 -~~~~~p~~~~~~lV~D~SS~~~--s-------~~iD~~~~d~iYagaQKnlGpaG~tvvIir~~ll~~~~~~~P~~l~y 223 (355)
T cd00611 154 -EFDEVPDTGGVPLVADMSSNIL--S-------RPIDVSKFGVIYAGAQKNLGPAGVTVVIVRKDLLGKARKITPSMLNY 223 (355)
T ss_pred -ECCCCCCCCCCCEEEEECCHHC--C-------CCCCHHHCCEEEEECCCCCCCCCEEEEEECHHHHHHCCCCCCCHHHH
T ss_conf -4465667789627875020540--8-------67677892189987100156665089998499971024469732009
Q ss_pred --------ECCCCCCCCHHHHHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHCCCCC-------CCCCC-EEEEEECC
Q ss_conf --------00135775025789887898862710---2247899999999876417978-------99897-28999589
Q gi|254780486|r 259 --------IYTTSPSPILAVVACEALKLIKRKPA---LHKSLLQLINITDKIANKKIGF-------SSQSH-IQSIVIGD 319 (381)
Q Consensus 259 --------ifst~l~P~~~aaa~aal~~l~~~~~---~~~~l~~~~~~~~~~~~~~~g~-------~~~s~-I~~v~~gd 319 (381)
+|.| +|-.....+...++-+++.-. ..++-.+.+..+.......-++ ...|. -+++.++|
T Consensus 224 ~~~~~~~s~~NT-Pp~f~iy~~~lv~~Wl~~~GGl~~~~~~n~~kA~~LY~~iD~s~~~y~~~v~~~~RS~mnv~f~~~~ 302 (355)
T cd00611 224 KTHADNNSLYNT-PPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQKAQLLYDTIDNSNGFYRGPVDKRARSRMNVPFRLGK 302 (355)
T ss_pred HHHHHHCCCCCC-CHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCHHHCCCCEEEEEECC
T ss_conf 999852555579-6279999999999998876899999999999999999999858880117898233587758998588
Q ss_pred HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 79999999999977918986228888888703999628789999999999999999
Q gi|254780486|r 320 NKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 320 ~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
+.....+.++..++|+. ..-.|..| +.+|+++-..++.|+++.+++-|++-
T Consensus 303 ~~l~~~Fl~~a~~~Gl~-~lkGhRsv----Gg~RaS~ynA~~~e~V~aL~~fm~~f 353 (355)
T cd00611 303 EELEKEFLKEAEAAGMI-GLKGHRSV----GGIRASIYNALSLEGVQALADFMKEF 353 (355)
T ss_pred HHHHHHHHHHHHHCCCC-CCCCCCCC----CCEEEEEECCCCHHHHHHHHHHHHHH
T ss_conf 78899999999987882-55687522----35278850898999999999999997
No 341
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase; InterPro: IPR012749 This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family..
Probab=98.23 E-value=0.00053 Score=45.07 Aligned_cols=294 Identities=16% Similarity=0.143 Sum_probs=163.8
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHH-HHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEEC--CCCH
Q ss_conf 368858999999998401288851674166024-5655666316897100454202677526664087640305--6881
Q gi|254780486|r 70 LCGNYNQHLELEEEAADFFGFEKMLYFGSGYAA-NMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIP--HNNI 146 (381)
Q Consensus 70 ~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~A-n~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~--HnD~ 146 (381)
++|+=+--++=+.=|-+-++...+|+.||++.| -++++-.=.++||-||+-.----|--++--|-||+++.+. ..-|
T Consensus 26 L~GdG~F~~~C~~Wl~~~~~~~K~lLTpSCT~aLEmaAlL~Di~~GDEVIMPSyTFVSTANAFvLRGa~~vFVDir~dTm 105 (376)
T TIGR02379 26 LSGDGPFSRRCEAWLEERTGTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTANAFVLRGAKIVFVDIRPDTM 105 (376)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCC
T ss_conf 13685113677899988515664211602567999999983046888367575145776677867288279996042000
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCC-CCCCCCEEEEEHHCCCCCC
Q ss_conf 478997643100024786079714621576613468999998631360898613112223-4777640110000134652
Q gi|254780486|r 147 NSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGV-CGPLGKGLTHIIEERNNVI 225 (381)
Q Consensus 147 ~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv-~G~~G~G~~~~~~~~~~~i 225 (381)
.==|++++.. ...+.+.+|.|- | .|--|++..|-.|+++|+..+|=|-|||+.- |-.+.-|..-+.+...--
T Consensus 106 NiDe~~IE~A--It~rT~aIvpVH--Y--aGVaC~M~tIM~la~k~~L~ViEDAAQG~~S~YkgraLG~IGh~g~fSFH- 178 (376)
T TIGR02379 106 NIDETKIEAA--ITERTKAIVPVH--Y--AGVACDMDTIMALANKHELFVIEDAAQGVMSTYKGRALGSIGHLGAFSFH- 178 (376)
T ss_pred CCCHHHHHHH--HCCCCEEEEEEE--C--CCEECCHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCCCHHCHHCCCCC-
T ss_conf 4676789886--325871899873--3--64210547898776434616996200474101278766440000021100-
Q ss_pred CCCCCCCCC--CCEEEEEE-CCCCCC---CCCCCCC-------CCE--------ECCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 100134656--53026752-451001---0000121-------100--------00135775025789887898862710
Q gi|254780486|r 226 VMHSCSKAL--GSSGALVG-SNKIIY---DYLINYA-------KPF--------IYTTSPSPILAVVACEALKLIKRKPA 284 (381)
Q Consensus 226 v~~TlsKa~--g~~GG~i~-~~~~ii---~~l~~~~-------~~~--------ifst~l~P~~~aaa~aal~~l~~~~~ 284 (381)
=.|-+ |+-||.++ -++.++ |-+|.+| ++. |.|+-| |.-..||.-..++-+.+.-
T Consensus 179 ----ETKNy~~GGEGGalliNd~~~~~RAEIirEKGT~Rs~FfrG~VDKYTW~diGSS~L-~sel~aAyL~aQl~~A~~I 253 (376)
T TIGR02379 179 ----ETKNYTSGGEGGALLINDQALIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYL-PSELQAAYLWAQLEQADRI 253 (376)
T ss_pred ----CCCCCCCCCCCCEEEEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHCCCCCC-HHHHHHHHHHHHHHHHHHH
T ss_conf ----01342125775505660778876677763058860112014302100001121002-5789999999999999998
Q ss_pred HHHHHHHHHHHHHHHH---HCC-CCC-------CCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECC-C---------
Q ss_conf 2247899999999876---417-978-------998972899958979999999999977918986228-8---------
Q gi|254780486|r 285 LHKSLLQLINITDKIA---NKK-IGF-------SSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRP-P--------- 343 (381)
Q Consensus 285 ~~~~l~~~~~~~~~~~---~~~-~g~-------~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~-P--------- 343 (381)
-.+||..=..|.+.+. .++ +.+ .-+.|..-|.+.+...=.++-+.|.++.|+.. +-| |
T Consensus 254 n~~Rl~~W~~Y~~~l~pl~~~g~~~lP~iP~~c~~NAHMfYikl~~~~~R~~~i~~~k~~~i~~V-fHY~PLH~~~AG~~ 332 (376)
T TIGR02379 254 NQERLALWQSYLDALKPLEEKGIIELPSIPEECQHNAHMFYIKLKDVDDRSELIKELKEQEILAV-FHYVPLHSSPAGRK 332 (376)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCEEEEEECCCHHHHHHHHHHHHHCCCEEE-EEECCCCCCHHHHH
T ss_conf 89999989999998644765374248888500056750577753576689999999863890489-95034678642110
Q ss_pred ----------CCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf ----------888887039996287899999999999999998
Q gi|254780486|r 344 ----------TVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 344 ----------tVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
|+..-.-.+|+-+-...+.+|.++.++++-+.+
T Consensus 333 fg~f~G~d~~TT~~Se~l~RLPl~~~l~~~~~~~vi~~~~~~~ 375 (376)
T TIGR02379 333 FGRFHGEDIYTTKESERLVRLPLYYGLSKEDQARVIETLLDYL 375 (376)
T ss_pred CCCCCCCCCCCHHHCCCEEECCEEECCCHHHHHHHHHHHHHHH
T ss_conf 0220465110103212025132011565888899999999970
No 342
>TIGR01437 selA_rel pyridoxal phosphate-dependent enzyme, putative; InterPro: IPR006337 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). PLP is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination , , . PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors . Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy . PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalyzed reactions, enzymatic and non-enzymatic . This entry represents a group of proteins that are related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation. .
Probab=98.19 E-value=0.0003 Score=46.66 Aligned_cols=324 Identities=17% Similarity=0.191 Sum_probs=179.8
Q ss_pred CCCEEEECCC-CCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHH
Q ss_conf 8976898034-465667798899999999998637868872244368858999999998401288851674166024565
Q gi|254780486|r 27 RRQDIWDFTS-HDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMA 105 (381)
Q Consensus 27 ~~~~~l~f~s-~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~ 105 (381)
.-++++|=++ =-.||-++ |-+++.++. + |+ ++-++ --.++-++.=+.+|+++|.|+|-+++|--+.-.-
T Consensus 7 ~lk~ViNa~GkMTiLGvs~---Vs~ev~~a~-~-~~----~~~F~-em~~ls~~tGe~~ar~lgvEdayIts~AsAGia~ 76 (391)
T TIGR01437 7 RLKRVINAIGKMTILGVSK---VSDEVLEAT-K-YV----SDIFI-EMDDLSRKTGEYIARRLGVEDAYITSGASAGIAL 76 (391)
T ss_pred CCEEEEECCCCEEECCCCH---HHHHHHHHH-H-HH----HHHCE-EHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
T ss_conf 5203672345213536640---369999998-7-56----55101-0899999999999988443067889878889999
Q ss_pred HHHHHCCCCCC--C---CHHHH----------CCH-----HHHHHHHHCCCCCEEECCCC---HHHHHHHHHHHHHCCCC
Q ss_conf 56663168971--0---04542----------026-----77526664087640305688---14789976431000247
Q gi|254780486|r 106 ILSTLPQATDL--I---VYDKL----------VHA-----SIREGINSGKAQAIAIPHNN---INSFAENINKWRKSGGK 162 (381)
Q Consensus 106 ~i~~l~~~~d~--i---i~D~~----------~Ha-----Si~~g~~ls~a~~~~f~HnD---~~~Le~~l~~~~~~~~~ 162 (381)
.+.+|..+++. + ++|+. -|. -+-+-+++.|.+++=|-..+ .++||..+++..+.
T Consensus 77 ~vAali~~g~~ar~~~~~i~e~g~~~~vv~~rgH~vdyg~PV~~~i~~gGg~ivE~G~~n~~s~~~lE~~I~~kt~a--- 153 (391)
T TIGR01437 77 AVAALISKGTRARVIKDIIEEKGRKREVVLQRGHNVDYGAPVEDLIALGGGRIVEVGDENLVSEESLEETIKEKTAA--- 153 (391)
T ss_pred HHHHHHCCCCCCEEECCHHHCCCCEEEEEEECCCCCCCCCCHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHH---
T ss_conf 99997516763201101032033400678627874567880899996189948997788875678999999773467---
Q ss_pred CCCEEEE---CCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCC-CCCCCCCCCCCCC-E
Q ss_conf 8607971---462157661346899999863136089861311222347776401100001346-5210013465653-0
Q gi|254780486|r 163 GFPWIVV---ESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNN-VIVMHSCSKALGS-S 237 (381)
Q Consensus 163 ~~~~vv~---egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~-~iv~~TlsKa~g~-~ 237 (381)
++.+ +-+ .| +...|+.+.+++++.|++-||||-|=- +-|.+- +..+...--| +|+ |=+|+|++ .
T Consensus 154 ---iLyvksh~~v-qk-~ml~P~~~~~~vA~~~~vPlIVDAAAe---iPP~ed-L~~y~~~GaDlViY--SGaKa~~gps 222 (391)
T TIGR01437 154 ---ILYVKSHHLV-QK-DMLLPVEEVIRVAQSYKVPLIVDAAAE---IPPEED-LTRYLKAGADLVIY--SGAKALEGPS 222 (391)
T ss_pred ---HHHHHHHCCC-CC-CCCCCHHHHHHHHHHCCCCEEEECCCC---CCCHHH-HHHHHHHCCCEEEE--CCHHHCCCCC
T ss_conf ---5556532135-76-666638999999975689889862568---988014-68999716875553--2034504643
Q ss_pred -EEEEECCCCCCCCCCCCCCC---------EECCC-CC--CCCHHHHHHHHHHHH---HHCCCH---HHHHHHHHHHHHH
Q ss_conf -26752451001000012110---------00013-57--750257898878988---627102---2478999999998
Q gi|254780486|r 238 -GALVGSNKIIYDYLINYAKP---------FIYTT-SP--SPILAVVACEALKLI---KRKPAL---HKSLLQLINITDK 298 (381)
Q Consensus 238 -GG~i~~~~~ii~~l~~~~~~---------~ifst-~l--~P~~~aaa~aal~~l---~~~~~~---~~~l~~~~~~~~~ 298 (381)
-|++.|+|++|++.+..+++ -+|=+ +| +==.+.+..+|+|-. .++.++ ++++...++....
T Consensus 223 nsGl~vGrK~~I~~~~~~g~gseenGPDGtrvfIgRaMKIgKe~ivg~v~AvE~yl~~~~e~~~~k~~~~l~p~a~aIs~ 302 (391)
T TIGR01437 223 NSGLVVGRKDYIAAAKSQGKGSEENGPDGTRVFIGRAMKIGKENIVGLVAAVERYLTFNDEDWLRKQRSRLDPIAEAISD 302 (391)
T ss_pred CCCEEECHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 26323300889999986288765668986568873265103689999999999985168726789999984369999852
Q ss_pred HHHCC--C-----C-CCCCCCEEEEEECCH---HHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHH
Q ss_conf 76417--9-----7-899897289995897---99999999999779189862288888887039996287899999999
Q gi|254780486|r 299 IANKK--I-----G-FSSQSHIQSIVIGDN---KSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVK 367 (381)
Q Consensus 299 ~~~~~--~-----g-~~~~s~I~~v~~gd~---~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~ 367 (381)
+.... . | -+.+-.+..|.+.-. -.|.++.++|+..-+-+..-.|- ...+.|-|-+. ...++|+..
T Consensus 303 i~~l~a~iv~D~agnhPR~i~r~rV~v~~~~~Gl~A~eV~~~Lk~~~~aIYtr~YQ---~~~G~~~ldpr-~v~e~e~~~ 378 (391)
T TIGR01437 303 IDDLMAKIVQDEAGNHPRDIYRARVKVDAEEGGLSADEVISRLKAERVAIYTREYQ---LLDGVLELDPR-SVKEDEMAL 378 (391)
T ss_pred HHHCEEEEEECCCCCCCCCEEEEEEEEECCCCCCCHHHHHHHHCCCCCCCHHHHHH---HHCCEEEECCC-CCCCCCHHH
T ss_conf 41011235676889888543688889822224767899999850799950022455---44885887661-136141689
Q ss_pred HHHHHHHHHHH
Q ss_conf 99999999887
Q gi|254780486|r 368 LFDILPQIISE 378 (381)
Q Consensus 368 ~~~~l~~v~~E 378 (381)
.++-|.++.+.
T Consensus 379 Iv~rL~eI~~~ 389 (391)
T TIGR01437 379 IVDRLSEIVEK 389 (391)
T ss_pred HHHHHHHHHHH
T ss_conf 99989999862
No 343
>KOG3846 consensus
Probab=98.07 E-value=0.0011 Score=43.15 Aligned_cols=333 Identities=16% Similarity=0.135 Sum_probs=171.7
Q ss_pred CCCCEEEECCCCCCCCCCCCHHHH-HHHHHHHHH-----HCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCC--CEEEEC
Q ss_conf 289768980344656677988999-999999986-----378688722443688589999999984012888--516741
Q gi|254780486|r 26 LRRQDIWDFTSHDYLALSSSTLLR-EKILSSLDS-----KIPIGSGGSRLLCGNYNQHLELEEEAADFFGFE--KMLYFG 97 (381)
Q Consensus 26 ~~~~~~l~f~s~dYLGl~~~p~v~-~a~~~a~~~-----~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e--~al~~~ 97 (381)
.+++..+-|++|+ |||. |.-. +-..+.++. -+|.-.+-.+++++...+.. -++...|+. ..-++|
T Consensus 63 ~~d~~~iYlcGNS-LGLm--PK~t~~~~~~eLDkWak~av~gH~~GkvPW~~~De~il~----l~~~iVGA~e~EvavmN 135 (465)
T KOG3846 63 SDDKPVIYLCGNS-LGLM--PKSTRNSINAELDKWAKCAVEGHFKGKVPWVSIDEPILP----LLAPIVGAQENEVAVMN 135 (465)
T ss_pred CCCCCEEEEECCC-CCCC--CHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHH----HHHHHCCCCCHHHHHHH
T ss_conf 8998707982561-3567--256676899999888764021011466661455624655----43443067701444575
Q ss_pred CCCHHHH-HHHHHHCCCCC---CCCHHHHCCHH----HHHHHHHCCCCCE-------EECCCCHHHHHHHHHHHHHCCCC
Q ss_conf 6602456-55666316897---10045420267----7526664087640-------30568814789976431000247
Q gi|254780486|r 98 SGYAANM-AILSTLPQATD---LIVYDKLVHAS----IREGINSGKAQAI-------AIPHNNINSFAENINKWRKSGGK 162 (381)
Q Consensus 98 sG~~An~-~~i~~l~~~~d---~ii~D~~~HaS----i~~g~~ls~a~~~-------~f~HnD~~~Le~~l~~~~~~~~~ 162 (381)
|= .+|+ .++-..-+|.. -|+..+.+-.| +..-+++.|.... +=.-...--.|..|+.+. ..++
T Consensus 136 sL-TvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREGEetlRteDILd~IE-kngD 213 (465)
T KOG3846 136 SL-TVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREGEETLRTEDILDTIE-KNGD 213 (465)
T ss_pred HH-HHHHHHHHHHHCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHCCCCHHHHEEEECCCCCCCCHHHHHHHHHHH-HCCC
T ss_conf 56-668999998850786046331000477884178887565235787578237734566631010787999997-3687
Q ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCC--CCCCCCCCEEEE
Q ss_conf 860797146215766134689999986313608986131122234777640110000134652100--134656530267
Q gi|254780486|r 163 GFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMH--SCSKALGSSGAL 240 (381)
Q Consensus 163 ~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~--TlsKa~g~~GG~ 240 (381)
...+|+.-||.--.|..-++++|...-..-|+++=.|=||++|-+-- ..+.+|+.-. -++. -+.-+-|+.||.
T Consensus 214 eiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL----~LHdWgVDFA-CWCSYKYlnaGaGgIgGl 288 (465)
T KOG3846 214 EIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPL----QLHDWGVDFA-CWCSYKYLNAGAGGIGGL 288 (465)
T ss_pred EEEEEEEECCEEECCCCCCHHHHHHCCCCCCCEECHHHHHHHCCCCE----EEEECCCCEE-EEEEECCCCCCCCCCCEE
T ss_conf 69999950524422532241443321357884762225645357752----7761577647-774201135688752225
Q ss_pred EECCCCCCCCC-----------------------CCCCCCEECCCCCCCC-HHHHHHHHHHHHHHC--CCHHHHHHHHHH
Q ss_conf 52451001000-----------------------0121100001357750-257898878988627--102247899999
Q gi|254780486|r 241 VGSNKIIYDYL-----------------------INYAKPFIYTTSPSPI-LAVVACEALKLIKRK--PALHKSLLQLIN 294 (381)
Q Consensus 241 i~~~~~ii~~l-----------------------~~~~~~~ifst~l~P~-~~aaa~aal~~l~~~--~~~~~~l~~~~~ 294 (381)
-.-.+...+.+ .--+-+|.- +-||. .+++...+|++...- .++|++-.-+..
T Consensus 289 FvHekh~~~~~prl~GWwgh~~s~RF~Mdnvl~lipGa~GfRi--SNPpi~~v~al~~SLe~F~q~~~~~lRkrS~lLTg 366 (465)
T KOG3846 289 FVHEKHTKESLPRLAGWWGHDPSKRFQMDNVLELIPGALGFRI--SNPPIIDVVALRSSLELFAQFNINELRKRSLLLTG 366 (465)
T ss_pred EEEHHHHCCHHHHHHHHCCCCCCHHHHHCCCCCCCCCCCCCCC--CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 6425432102167750214780034300120355764112113--79847379988766999988539988653446776
Q ss_pred HHHHHHHCCCCCC----CCCCEEEEEECC-------------HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEEC-
Q ss_conf 9998764179789----989728999589-------------7999999999997791898622888888870399962-
Q gi|254780486|r 295 ITDKIANKKIGFS----SQSHIQSIVIGD-------------NKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISI- 356 (381)
Q Consensus 295 ~~~~~~~~~~g~~----~~s~I~~v~~gd-------------~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v- 356 (381)
|...+.....|.+ +.-+.+.|+.+. ......+.++|.+||+.+- -|+|.| ||+.+
T Consensus 367 YleyL~k~~~g~~~~~rt~Kl~~~IiTP~~~~erGcQLsl~Fssp~~~vfqeL~krGv~~D-kR~PNv------IRvAPv 439 (465)
T KOG3846 367 YLEYLLKASKGYKHPLRTEKLFFTIITPTSTDERGCQLSLYFSSPTPKVFQELHKRGVIGD-KRRPNV------IRVAPV 439 (465)
T ss_pred HHHHHHHHHCCCCCHHHHCCEEEEEECCCCCCCCCCEEEEEECCCCHHHHHHHHHCCEECC-CCCCCC------EEEECC
T ss_conf 8999998741667600221615998478641445646999967995188999987370132-558883------286142
Q ss_pred CCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 8789999999999999999887387
Q gi|254780486|r 357 TLNVDEPTIVKLFDILPQIISEGNS 381 (381)
Q Consensus 357 ~a~~t~edi~~~~~~l~~v~~E~~s 381 (381)
+...|--|+.+++.+|.+++....|
T Consensus 440 pLYN~f~Dvy~f~n~L~e~~d~~es 464 (465)
T KOG3846 440 PLYNTFSDVYIFVNALNEAMDKLES 464 (465)
T ss_pred HHHCCHHHHHHHHHHHHHHHHHHHC
T ss_conf 0000189999999999999987525
No 344
>TIGR01814 kynureninase kynureninase; InterPro: IPR010111 This entry describes kynureninase, it is a pyridoxal-5'-phosphate (PLP)-dependent enzyme that catalyzes the hydrolytic cleavage of L-kynurenine to anthranilic acid and L-alanine. Kynurinine is a Trp breakdown product and a precursor for NAD. This reaction is a key step in the catabolism of L-tryptophan by Pseudomonas fluorescens and some other bacteria (1). In fungi and vertebrates, kynurenine is first hydroxylated to 3-hydroxykynurenine, which is the preferred substrate of kynureninase in those organisms, resulting in 3-hydroxyanthranilate and L-alanine. Sequence alignment with other PLP-dependent enzymes indicated that kynureninase is in subgroup IVa of the aminotransferases, along with nifS, CsdB, and serine-pyruvate aminotransferase, which suggests that kynureninase has an aminotransferase fold .; GO: 0030170 pyridoxal phosphate binding, 0030429 kynureninase activity, 0006569 tryptophan catabolic process, 0009435 NAD biosynthetic process, 0005737 cytoplasm.
Probab=98.04 E-value=0.00075 Score=44.14 Aligned_cols=322 Identities=18% Similarity=0.264 Sum_probs=184.1
Q ss_pred CCCEEEECCCCCCCCCCCCHH-HHHHHHHHHHHHC------CCC-----CCCCCCCCCCCHHHHHHHHHHHHHCCC--CC
Q ss_conf 897689803446566779889-9999999998637------868-----872244368858999999998401288--85
Q gi|254780486|r 27 RRQDIWDFTSHDYLALSSSTL-LREKILSSLDSKI------PIG-----SGGSRLLCGNYNQHLELEEEAADFFGF--EK 92 (381)
Q Consensus 27 ~~~~~l~f~s~dYLGl~~~p~-v~~a~~~a~~~~~------g~~-----~~~sr~~~G~~~~~~~lE~~lA~~~g~--e~ 92 (381)
+.++.+-++ | = |+--|+ ..+...+.++ +| +.. .+-..++ ..++.+++-.++.+++ ++
T Consensus 35 ~~~~~iYL~-N-S--Lal~pk~~~~~~~~~lD-~W~~~~~~~~~khPee~~~~pW~----~~~~~~~~l~~~vlvA~~~e 105 (444)
T TIGR01814 35 DENEVIYLD-N-S--LALMPKSAREALKEILD-KWAKLAVESHNKHPEEVGKVPWF----TLDEALLKLLADVLVAQEKE 105 (444)
T ss_pred CCCCEEEEE-C-C--CCHHHHHHHHHHHHHHH-HHHHHHHHHHCCCCHHCCCCCCC----CCCHHHHCCCCHHEECCCCC
T ss_conf 998779700-4-1--12368999999999987-68999987520571003678862----03453531431001116653
Q ss_pred EEEECCCCHHHH-HHHHHHCCC-------CCCCCHHHHCCHH----HHHHHHHCCCC----CE--EECC----CCHHHHH
Q ss_conf 167416602456-556663168-------9710045420267----75266640876----40--3056----8814789
Q gi|254780486|r 93 MLYFGSGYAANM-AILSTLPQA-------TDLIVYDKLVHAS----IREGINSGKAQ----AI--AIPH----NNINSFA 150 (381)
Q Consensus 93 al~~~sG~~An~-~~i~~l~~~-------~d~ii~D~~~HaS----i~~g~~ls~a~----~~--~f~H----nD~~~Le 150 (381)
..+++| ...|+ .++.+.-+| ...|+.|+.+=.| +-..+++-+.. .+ ..+- ..++|..
T Consensus 106 vv~~ns-lT~NLh~ll~~Fy~pqredt~~R~kIL~E~~aFPSD~Ya~e~Q~~L~g~~~e~~l~~~~p~~~e~tLr~~di~ 184 (444)
T TIGR01814 106 VVVMNS-LTVNLHKLLASFYKPQREDTEKRTKILLEAKAFPSDLYAIESQLRLHGLEPEEHLVQVEPREAEETLRLEDIL 184 (444)
T ss_pred EEEECH-HHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCHHHHHHHH
T ss_conf 663004-3388999999870754247733457565167887279999999746798734412677422344211078899
Q ss_pred HHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCC-CCCCCCCEEEEEHHCCCCCC-CCC
Q ss_conf 9764310002478607971462157661346899999863136089861311222-34777640110000134652-100
Q gi|254780486|r 151 ENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATG-VCGPLGKGLTHIIEERNNVI-VMH 228 (381)
Q Consensus 151 ~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~G-v~G~~G~G~~~~~~~~~~~i-v~~ 228 (381)
..+... .+.-.+|+.-||--=+|-+=++++|...+++-+++++.|=||++| | .-.+-.-+.|+ +--
T Consensus 185 ~~iE~~----~D~~A~v~l~~V~Y~TGQ~fDm~~~t~~a~~~~~~~vfDLAHa~~Nv--------Pl~LH~w~VDFA~WC 252 (444)
T TIGR01814 185 DTIEKN----GDEIALVLLSGVQYYTGQLFDMRAITRAAHKRGAIVVFDLAHAVANV--------PLDLHDWGVDFACWC 252 (444)
T ss_pred HHHHHC----CCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEHHHHHCCC--------CCCCCCCCCCEEEEC
T ss_conf 999853----89789998478443023678999999997089765996022211076--------322578888777884
Q ss_pred C---CCCCCCC-EEEEEECCCCCCCCCC-----CCCCCEEC---------------CCCCCCCHHHHHHHH-HHHHHHC-
Q ss_conf 1---3465653-0267524510010000-----12110000---------------135775025789887-8988627-
Q gi|254780486|r 229 S---CSKALGS-SGALVGSNKIIYDYLI-----NYAKPFIY---------------TTSPSPILAVVACEA-LKLIKRK- 282 (381)
Q Consensus 229 T---lsKa~g~-~GG~i~~~~~ii~~l~-----~~~~~~if---------------st~l~P~~~aaa~aa-l~~l~~~- 282 (381)
| |.=+-|. .|.||-.+....+..+ .+.+++-| =-+-||....+++.| |++..+-
T Consensus 253 ~YKYLNa~pg~v~~~F~h~~~~~~~~~~~~lwWwh~~~~rF~m~~~~~~~~g~~~~~~snPpv~~~a~L~sSL~~F~q~~ 332 (444)
T TIGR01814 253 SYKYLNASPGIVVGAFVHEKHAHEELPRLALWWWHARPKRFKMENTLVLRPGAAAFRLSNPPVLSVAALRSSLDLFDQAS 332 (444)
T ss_pred CCCCCCCHHHHHHHHHCCHHHHCCCCHHCCCCCCCCCCHHHCCCHHCCCCCCCHHHHHCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 66011611355512310224411420002553245763432441102556420243305876888988885477663058
Q ss_pred -CCHHHHHHHHHHHHHHHHHCCCCCC------CCCCEE---------------EEEE-CCHHHHHHHHHHHHHCCEEEEE
Q ss_conf -1022478999999998764179789------989728---------------9995-8979999999999977918986
Q gi|254780486|r 283 -PALHKSLLQLINITDKIANKKIGFS------SQSHIQ---------------SIVI-GDNKSCLNIAKNLQKKGFDIRA 339 (381)
Q Consensus 283 -~~~~~~l~~~~~~~~~~~~~~~g~~------~~s~I~---------------~v~~-gd~~~a~~~~~~L~~~Gi~v~~ 339 (381)
+.+|+|-..+..|+.++.....+.+ +.-+++ .+.. ++......+.++|.+||+ |.=
T Consensus 333 m~~lRkKS~~LTdyl~~L~~~~~~~~~~~rie~~k~~~~I~TP~~~~~Rgcqls~~~~~~~~~~~~~~~~L~~r~v-v~D 411 (444)
T TIGR01814 333 MEALRKKSLLLTDYLEELIKARCAYKKALRIETLKLVLTIITPEDHAQRGCQLSLEFPSDRKEDAAVFQALIKRGV-VID 411 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCC-EEE
T ss_conf 4899999988877899999852258512320357856897378881215543789707888703578999986796-330
Q ss_pred ECCCCCCCCCCEEEEE-CCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 2288888887039996-2878999999999999999988
Q gi|254780486|r 340 IRPPTVPINTARLRIS-ITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 340 i~~PtVp~~~~rlRi~-v~a~~t~edi~~~~~~l~~v~~ 377 (381)
.|.|-| |||. ++...|-.||-+++++|++|+.
T Consensus 412 ~R~P~v------IR~APvpLYn~F~DVy~~V~~L~~~~~ 444 (444)
T TIGR01814 412 FREPSV------IRLAPVPLYNTFVDVYDAVEVLEEILE 444 (444)
T ss_pred CCCCCC------EEEECCCCCCCEEHHHHHHHHHHHHHC
T ss_conf 258883------276276453655049899999999949
No 345
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=97.99 E-value=0.0016 Score=42.12 Aligned_cols=317 Identities=12% Similarity=0.172 Sum_probs=162.1
Q ss_pred CEEEECCCCCCCCCCCC-HHHHHHHHHHHHHHCCCCCCCCCC-CCC----CCHHHHHHHHHHHHHCCCC---CEEEECCC
Q ss_conf 76898034465667798-899999999998637868872244-368----8589999999984012888---51674166
Q gi|254780486|r 29 QDIWDFTSHDYLALSSS-TLLREKILSSLDSKIPIGSGGSRL-LCG----NYNQHLELEEEAADFFGFE---KMLYFGSG 99 (381)
Q Consensus 29 ~~~l~f~s~dYLGl~~~-p~v~~a~~~a~~~~~g~~~~~sr~-~~G----~~~~~~~lE~~lA~~~g~e---~al~~~sG 99 (381)
+..+||++ |=+.= ++|.+.+++.+...-|+|.+ -+ ++- ..+++.+.|+.|.++++-| +.++++.|
T Consensus 3 ~~~~NF~a----GPa~LP~~Vl~~~~~e~~~~~~~G~s--imE~SHRs~~f~~i~~~a~~~lr~Ll~iPd~Y~VlflqGG 76 (364)
T PRK12462 3 RNQLNFSG----GPGALPDTVLEQVRQAVVELPETGLS--VLGMSHRSSWFSSLLAQAQADLRDLLGIPDEYGVVFLQGG 76 (364)
T ss_pred CCCCCCCC----CCCCCCHHHHHHHHHHHHHCCCCCCE--EEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 67621588----86448999999999998605689702--7850668888999999999999998589998279995681
Q ss_pred CHHHHHHHHH-HCCCCC----CCCHHHHCCHHHHHHHHHCCCCCEEE-CCCCHHHHHHHHHHHHHCCCCCCCEE-EE--C
Q ss_conf 0245655666-316897----10045420267752666408764030-56881478997643100024786079-71--4
Q gi|254780486|r 100 YAANMAILST-LPQATD----LIVYDKLVHASIREGINSGKAQAIAI-PHNNINSFAENINKWRKSGGKGFPWI-VV--E 170 (381)
Q Consensus 100 ~~An~~~i~~-l~~~~d----~ii~D~~~HaSi~~g~~ls~a~~~~f-~HnD~~~Le~~l~~~~~~~~~~~~~v-v~--e 170 (381)
-.+..+.+|. |.+++. .+..-.-+...+-++.+.+..+++.- ...+...+-. +.... ...+. ..+ .+ |
T Consensus 77 At~qf~~ip~Nll~~~~~~a~y~~tG~WS~kA~~EA~k~~~~~~~~~~~~~~~~~iP~-~~~~~-~~~~~-~y~h~t~Ne 153 (364)
T PRK12462 77 SSLQFSMIPMNFSRPGAAAPEYVTTGYWSRKAIGEASRVAAMRVVWDGAASGYRTLPS-LAALD-WDARA-PFRHYVSNE 153 (364)
T ss_pred HHHHHHHHHHHCCCCCCCCCEEEECCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCC-HHHCC-CCCCC-CEEEECCCC
T ss_conf 7899999986375678852349962786899999999758914862356688864677-43227-78884-469862577
Q ss_pred CCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE-EEEECCCCCCC
Q ss_conf 62157661346899999863136089861311222347776401100001346521001346565302-67524510010
Q gi|254780486|r 171 SIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG-ALVGSNKIIYD 249 (381)
Q Consensus 171 gv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G-G~i~~~~~ii~ 249 (381)
.|+ |.- +.+..+..+..|++|=+=.++ + ..++...-+++-..--|-+|..| ..+..++++++
T Consensus 154 Ti~---Gvq-----~~~~~~~~~~plV~DmSS~~l--s-------rpiD~s~~~viYagaQKN~G~aG~tvvIir~dll~ 216 (364)
T PRK12462 154 TVE---GLQ-----FPDAADLPDSPLIADMSSDFM--S-------RPFDVRAYGMVYAHAQKNLGPAGVTVAIIRRALLE 216 (364)
T ss_pred CCC---CEE-----ECCCCCCCCCEEEEECCHHHH--C-------CCCCHHHEEEEEEECCCCCCCCCEEEEEECHHHHC
T ss_conf 423---324-----156789999738873460651--6-------76567790389986211256666189998799961
Q ss_pred CCCCCCCCE-----------ECCCCCCCCHHHHHHHHHHHHHHC-CC---HHHHHHHHHHHHHHHHHCCCCC-------C
Q ss_conf 000121100-----------001357750257898878988627-10---2247899999999876417978-------9
Q gi|254780486|r 250 YLINYAKPF-----------IYTTSPSPILAVVACEALKLIKRK-PA---LHKSLLQLINITDKIANKKIGF-------S 307 (381)
Q Consensus 250 ~l~~~~~~~-----------ifst~l~P~~~aaa~aal~~l~~~-~~---~~~~l~~~~~~~~~~~~~~~g~-------~ 307 (381)
.....-|++ +|.| +|-.....+...++-+.++ -. ..++-.+.+.++-......-++ .
T Consensus 217 ~~~~~iP~~ldy~~~~~~~S~yNT-Pp~f~Iy~~~lvl~Wl~~~~GGl~~~~~~n~~Ka~~LY~~iD~s~~fy~~~v~~~ 295 (364)
T PRK12462 217 RVPDTLPPMLDFRTHVEHRSNYNT-PPVFAIYVMALVLRWIRDEIGGVHAMRDINARKAAMLYATLDALNEVIDCHAHRA 295 (364)
T ss_pred CCCCCCCCCCCHHHHHHHCCCCCC-CCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCC
T ss_conf 622038640218889860887889-4269999999999999862135589999999999999999971878766889846
Q ss_pred CCCCE-EEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 98972-89995897999999999997791898622888888870399962878999999999999999988
Q gi|254780486|r 308 SQSHI-QSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 308 ~~s~I-~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
..|.+ +++.+.++.....+.++..++|+.- .=.|..| +.+|+++--..+.|+++.+++-+++--+
T Consensus 296 ~RS~mNv~F~~~~~~l~~~Fl~~a~~~Gl~~-lkGhRsv----GG~RaSlYNa~~~e~V~~L~~fM~~F~~ 361 (364)
T PRK12462 296 ARSTMNVAFRFRQPRLDTLFKEQSTEAGFCG-LSGHRSI----GGIRASLYNAVSEQAVSRLCAFLKDFAI 361 (364)
T ss_pred CCCCEEEEEECCCHHHHHHHHHHHHHCCCCC-CCCCCCC----CCCEEECCCCCCHHHHHHHHHHHHHHHH
T ss_conf 5885884681497667899999999879866-5188711----4526771179999999999999999998
No 346
>TIGR02006 IscS cysteine desulfurase IscS; InterPro: IPR010240 This entry represents cysteine deusulphurase (IscS), one of several cysteine desulphurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulphur cluster assembly.; GO: 0030170 pyridoxal phosphate binding, 0031071 cysteine desulfurase activity, 0006534 cysteine metabolic process.
Probab=97.92 E-value=0.0021 Score=41.38 Aligned_cols=323 Identities=15% Similarity=0.166 Sum_probs=174.2
Q ss_pred CHHHHHHHHHHHHHHCCCCCCCCCC-CCCCC--HHHHHHHHHHHHHCCCC-CEEEECCCC-HHHHHHHHHH----CCCCC
Q ss_conf 8899999999998637868872244-36885--89999999984012888-516741660-2456556663----16897
Q gi|254780486|r 45 STLLREKILSSLDSKIPIGSGGSRL-LCGNY--NQHLELEEEAADFFGFE-KMLYFGSGY-AANMAILSTL----PQATD 115 (381)
Q Consensus 45 ~p~v~~a~~~a~~~~~g~~~~~sr~-~~G~~--~~~~~lE~~lA~~~g~e-~al~~~sG~-~An~~~i~~l----~~~~d 115 (381)
++.+.++..+-+....-+|...||- ..|-. ...+..-..+|+..+.+ .-++|.||. .+|--++..+ ..++.
T Consensus 16 ~~~v~~~m~~~~~~~g~fGnP~s~sh~fGW~a~~~v~~ar~~~~~~~~~d~~ei~ftsGate~~nl~i~G~a~fy~~k~~ 95 (404)
T TIGR02006 16 DKRVAEKMLEYLTEKGNFGNPASRSHKFGWEAEEAVENARNEVAELIGADSREIVFTSGATESDNLAIKGVAKFYKSKGK 95 (404)
T ss_pred HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCC
T ss_conf 58999999998874156688642343345306889999999999984588740787237753024788889999742376
Q ss_pred CCCHHHHCCHHHHHHHHHCC--CCCEEE---CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH
Q ss_conf 10045420267752666408--764030---5688147899764310002478607971462157661346899999863
Q gi|254780486|r 116 LIVYDKLVHASIREGINSGK--AQAIAI---PHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIAN 190 (381)
Q Consensus 116 ~ii~D~~~HaSi~~g~~ls~--a~~~~f---~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~ 190 (381)
+|+.-..-|.++.+.+|--. +-.++| +.|-+-+++.+-... .+.+++|-+=-|..--|.+-|+.+|-++|+
T Consensus 96 h~it~~~ehk~vl~~~r~le~~G~~vtyl~~~~~G~~~~~~l~~~~----~~~t~lvs~m~vnne~G~~~~~~~i~~~~r 171 (404)
T TIGR02006 96 HIITSKTEHKAVLDTCRELEREGFEVTYLEVKEDGLIDLEELKAAI----RDDTILVSVMAVNNEIGVIQDIAAIGELCR 171 (404)
T ss_pred EEEEEEHHHHHHHHHHHHHHHCCCEEEEEECCCCCCEEHHHHHHHH----HCCEEEEEEEEECCCCCHHHHHHHHHHHHH
T ss_conf 6786400367899999988757816898501456621089999874----127057875531144330465889998763
Q ss_pred HCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCE--EE-EEECCCCCC-CCCCCCCCCE---ECCCC
Q ss_conf 13608986131122234777640110000134652100134656530--26-752451001-0000121100---00135
Q gi|254780486|r 191 DYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSS--GA-LVGSNKIIY-DYLINYAKPF---IYTTS 263 (381)
Q Consensus 191 ~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~--GG-~i~~~~~ii-~~l~~~~~~~---ifst~ 263 (381)
+.+++..+|-++++|-+ .-.......+++.-+-.|-+|.- |+ ||--.+.+. +.+. ++.+. +-++.
T Consensus 172 ~~~~~fh~d~~q~~Gk~-------~~~~~~~~~dl~s~s~hk~yGPkGiGalyv~~~Prvr~~~~~-~GGG~erG~r~Gt 243 (404)
T TIGR02006 172 ERKVLFHVDAAQSVGKI-------PIDVEELKVDLMSISGHKIYGPKGIGALYVRRKPRVRLEALI-HGGGHERGMRSGT 243 (404)
T ss_pred HCCEEEEEECCCCCCCE-------EEEHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEC-CCCCCCCCCCCCC
T ss_conf 04414764000134511-------343534310121001231026755212455127733552000-4887435410244
Q ss_pred CCCCHHHHHHHHHHHHHHCC----C----HHHHHHHHHHHHHHHH-HCCC--CCCCCCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 77502578988789886271----0----2247899999999876-4179--7899897289995897999999999997
Q gi|254780486|r 264 PSPILAVVACEALKLIKRKP----A----LHKSLLQLINITDKIA-NKKI--GFSSQSHIQSIVIGDNKSCLNIAKNLQK 332 (381)
Q Consensus 264 l~P~~~aaa~aal~~l~~~~----~----~~~~l~~~~~~~~~~~-~~~~--g~~~~s~I~~v~~gd~~~a~~~~~~L~~ 332 (381)
++.......-.+.++.+++- . +++++...+......- +... ..+..-.|-+-.+-.+.....+.+-...
T Consensus 244 l~~~~ivG~G~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~~~~~~ln~sf~~veGesl~~a~~~~avs 323 (404)
T TIGR02006 244 LPTHQIVGLGEAFRIAKEELAKDTARVLKLRDRLLNGIESIEEVYLNGDLEQRVKGNLNVSFNYVEGESLIMALKDLAVS 323 (404)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHEEEEEEECHHHHHHHHHHHHHC
T ss_conf 32014321016789999999888999999999999987445653312114431122210122200204788888887530
Q ss_pred CCEEEEEE-CCC-----CCC----CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 79189862-288-----888----887039996287899999999999999998873
Q gi|254780486|r 333 KGFDIRAI-RPP-----TVP----INTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 333 ~Gi~v~~i-~~P-----tVp----~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
-|-.+... --| +.. ...+-+|+++....|+++|+..++.+.+.+..+
T Consensus 324 sGsaCts~slePsyvlr~lG~~~elah~s~r~~~Gr~tt~~e~~~~~~~v~~~~~~l 380 (404)
T TIGR02006 324 SGSACTSASLEPSYVLRALGLNDELAHSSIRFTLGRFTTEEEIDYAVKLVKSAVDKL 380 (404)
T ss_pred CCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 564100133535578876064201223222100111210789999999999999988
No 347
>KOG0628 consensus
Probab=97.84 E-value=0.0029 Score=40.51 Aligned_cols=291 Identities=15% Similarity=0.153 Sum_probs=145.2
Q ss_pred CHHHHHHHHHHHHHC----CCC-----------CEEEECCCCHHHHHHHHHH-C------CCC------------CCCCH
Q ss_conf 589999999984012----888-----------5167416602456556663-1------689------------71004
Q gi|254780486|r 74 YNQHLELEEEAADFF----GFE-----------KMLYFGSGYAANMAILSTL-P------QAT------------DLIVY 119 (381)
Q Consensus 74 ~~~~~~lE~~lA~~~----g~e-----------~al~~~sG~~An~~~i~~l-~------~~~------------d~ii~ 119 (381)
.+...|||.-+-+|+ +-| -..+..|...+++-++-+- . +.+ -++++
T Consensus 108 sPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~~lV~Y~ 187 (511)
T KOG0628 108 SPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLARLVAYC 187 (511)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHEEEE
T ss_conf 84067899999999999851809874367899960685475135899999999999998632897644055653424882
Q ss_pred HHHCCHHHHHHHHHCCCCCEEECCC-----CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCH--HHHHHHHHHHHHC
Q ss_conf 5420267752666408764030568-----81478997643100024786079714621576613--4689999986313
Q gi|254780486|r 120 DKLVHASIREGINSGKAQAIAIPHN-----NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDK--APLDDLVKIANDY 192 (381)
Q Consensus 120 D~~~HaSi~~g~~ls~a~~~~f~Hn-----D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~--apL~~i~~l~~~y 192 (381)
-.++|.|+-.++.+++.+.+..+-- +-+.|++.+++-+++.- .++++.-. +...|.- -+|.+|-.+|+++
T Consensus 188 SDqahssveka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGl--IPf~v~at-~GTT~~ca~D~l~elg~Vc~~~ 264 (511)
T KOG0628 188 SDQAHSSVEKACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGL--IPFFVCAT-LGTTSSCAFDELEELGPVCREE 264 (511)
T ss_pred CCCCCCHHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHHCCC--CCEEEEEE-ECCCCCCCCCCHHHHCCHHHHC
T ss_conf 47641268876744002688851366767787999999999986798--65799984-0576555554187741035226
Q ss_pred CEEEEECCCCCCCCCCCCCCEEEEEH-----HCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCC-----CCCCCEE---
Q ss_conf 60898613112223477764011000-----0134652100134656530267524510010000-----1211000---
Q gi|254780486|r 193 DGFIVVDEAHATGVCGPLGKGLTHII-----EERNNVIVMHSCSKALGSSGALVGSNKIIYDYLI-----NYAKPFI--- 259 (381)
Q Consensus 193 ~~~LivDEah~~Gv~G~~G~G~~~~~-----~~~~~~iv~~TlsKa~g~~GG~i~~~~~ii~~l~-----~~~~~~i--- 259 (381)
|.+|.||-|++=..+ .|+.+ |+...+-.-...+|.+-. -|-++.=.+.+--+ +.-+-|.
T Consensus 265 glWLHVDAAYAGsa~------iCpE~r~l~rGie~aDSfn~n~hK~~~v--nfDCs~lWvkd~~~~~~~~~vdp~yL~h~ 336 (511)
T KOG0628 265 GLWLHVDAAYAGSAF------ICPEFRYLMRGIEYADSFNFNPHKWLLV--NFDCSPLWVKDGTKLSRAFNVDPLYLKHA 336 (511)
T ss_pred CEEEEEEHHHCCCCC------CCHHHHHHHHCCHHHCCCCCCHHHEEEE--EEEEECCEEECCCEEEEEEECCHHHHCCH
T ss_conf 878996345315431------5887887750223330335785260377--65300034504760466650382764443
Q ss_pred CCCCCCCCHH-----HHHHHHHHH---HHH--CCCHHHHHHHHHH---HHHHHHHCCCCCCCCCC----EEEEEE-CCHH
Q ss_conf 0135775025-----789887898---862--7102247899999---99987641797899897----289995-8979
Q gi|254780486|r 260 YTTSPSPILA-----VVACEALKL---IKR--KPALHKSLLQLIN---ITDKIANKKIGFSSQSH----IQSIVI-GDNK 321 (381)
Q Consensus 260 fst~l~P~~~-----aaa~aal~~---l~~--~~~~~~~l~~~~~---~~~~~~~~~~g~~~~s~----I~~v~~-gd~~ 321 (381)
++..-++.-- .--..+|++ ++. -+.+++..++-++ .+..+.....-|.-..+ .+++.+ +++.
T Consensus 337 ~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~FE~~~~~~lgLvcFRlk~~N~ 416 (511)
T KOG0628 337 YQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRFEIVNKRILGLVCFRLKGDNE 416 (511)
T ss_pred HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEEEECCCCH
T ss_conf 32368882101152001132678999999886889999999999999999998604874155022100215775258747
Q ss_pred HHHHHHHHHHHCC-EEEEEECCCCCCCCCCEEEEECCCCCC-HHHHHHHHHHHHHHHHHH
Q ss_conf 9999999999779-189862288888887039996287899-999999999999998873
Q gi|254780486|r 322 SCLNIAKNLQKKG-FDIRAIRPPTVPINTARLRISITLNVD-EPTIVKLFDILPQIISEG 379 (381)
Q Consensus 322 ~a~~~~~~L~~~G-i~v~~i~~PtVp~~~~rlRi~v~a~~t-~edi~~~~~~l~~v~~E~ 379 (381)
...++.+++...| |...+. .-.|+-.||+++.+..| .+||+..-..|.+..+++
T Consensus 417 ~ne~Ll~~in~~g~i~l~~~----~l~gk~vlRf~V~s~~t~~~di~~a~~~I~~~a~~l 472 (511)
T KOG0628 417 INEALLNRLNSSGRIHLVPA----SLHGKFVLRFAVCSPLTNESDIDEAWKIIFEAADEL 472 (511)
T ss_pred HHHHHHHHHHHCCCEEEEEE----EECCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
T ss_conf 89999999973696899776----314669999982478785788999999999999998
No 348
>PRK05355 phosphoserine aminotransferase; Provisional
Probab=97.68 E-value=0.0051 Score=38.95 Aligned_cols=317 Identities=15% Similarity=0.198 Sum_probs=160.2
Q ss_pred EEEECCCCCCCCCCC-CHHHHHHHHHHHHHHCCCCCC----CCCCCCCCCHHHHHHHHHHHHHCCCC---CEEEECCCCH
Q ss_conf 689803446566779-889999999999863786887----22443688589999999984012888---5167416602
Q gi|254780486|r 30 DIWDFTSHDYLALSS-STLLREKILSSLDSKIPIGSG----GSRLLCGNYNQHLELEEEAADFFGFE---KMLYFGSGYA 101 (381)
Q Consensus 30 ~~l~f~s~dYLGl~~-~p~v~~a~~~a~~~~~g~~~~----~sr~~~G~~~~~~~lE~~lA~~~g~e---~al~~~sG~~ 101 (381)
+..||++ |=+. -++|.+.+++.+...-|.|.+ +=|- .-...++.+.++.|.++++-| +.++++.|-.
T Consensus 3 r~~NF~a----GPa~LP~~Vl~~~~~e~~~~~g~G~silEiSHRs-~~f~~i~~~a~~~lr~Ll~iPd~YeVlflqGGat 77 (360)
T PRK05355 3 RVYNFSA----GPAMLPEEVLEQAQQELLDWNGSGMSVMEISHRS-KEFIAVAEEAEADLRELLNIPDNYKVLFLQGGAS 77 (360)
T ss_pred CCCCCCC----CCCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCC-HHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHH
T ss_conf 8511788----8543899999999999860258886057545588-8899999999999999848999818999578458
Q ss_pred HHHHHHHH-HCCCC---CCCCHHHHCCHHHHHHHHHCCCCCEEEC-CCCHHHHHHHHHHHHHCCCCCCCEEE---ECCCC
Q ss_conf 45655666-31689---7100454202677526664087640305-68814789976431000247860797---14621
Q gi|254780486|r 102 ANMAILST-LPQAT---DLIVYDKLVHASIREGINSGKAQAIAIP-HNNINSFAENINKWRKSGGKGFPWIV---VESIY 173 (381)
Q Consensus 102 An~~~i~~-l~~~~---d~ii~D~~~HaSi~~g~~ls~a~~~~f~-HnD~~~Le~~l~~~~~~~~~~~~~vv---~egv~ 173 (381)
+..+.++. |..++ +++..-.-+.-.+.++-++...++..-. .+....+.. ...+.- .+....+- =|.++
T Consensus 78 ~qF~~ip~Nll~~~~~a~y~~tG~Ws~KA~~EA~~~~~~~v~~~~~~~~~~~iP~-~~~~~~--~~~~~Y~h~t~NETi~ 154 (360)
T PRK05355 78 LQFAMVPLNLLGKGGKADYVVTGSWSKKAIKEAKKYGEVNVAASSEDDGFTYIPP-LDEWQL--SDDAAYVHYTPNETID 154 (360)
T ss_pred HHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCC-HHHCCC--CCCCCEEEECCCCCCC
T ss_conf 9999998746788980238953888999999737616873201346677755898-665277--9775679971477501
Q ss_pred CCCCC-HHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE-EEEECCCCCCCCC
Q ss_conf 57661-346899999863136089861311222347776401100001346521001346565302-6752451001000
Q gi|254780486|r 174 SMDGD-KAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG-ALVGSNKIIYDYL 251 (381)
Q Consensus 174 Sm~G~-~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G-G~i~~~~~ii~~l 251 (381)
|. +.++| +.-+..|++|=+=.++ + ..++...-+++-..--|-+|..| .++.-++++++.-
T Consensus 155 ---Gv~~~~~P------~~~~~pLV~DmSS~~l--s-------rpiD~~~~d~iYagaQKNlGpaGvtvvIvr~~ll~~~ 216 (360)
T PRK05355 155 ---GTEIHELP------DTGDVPLVADMSSDIL--S-------RPIDVSKFGLIYAGAQKNIGPAGLTIVIVREDLLGRA 216 (360)
T ss_pred ---CEEECCCC------CCCCCCEEEECCCCCC--C-------CCCCHHHCCEEEEECCCCCCCCCCEEEEEEHHHHHCC
T ss_conf ---04610136------6689847997345434--7-------7677789157998743357876518999759996223
Q ss_pred CCCCCCE-----------ECCCCCCCCHHHHHHHHHHHHHHCCCH---HHHHHHHHHHHHHHHH-CCC--C-C--CCCCC
Q ss_conf 0121100-----------001357750257898878988627102---2478999999998764-179--7-8--99897
Q gi|254780486|r 252 INYAKPF-----------IYTTSPSPILAVVACEALKLIKRKPAL---HKSLLQLINITDKIAN-KKI--G-F--SSQSH 311 (381)
Q Consensus 252 ~~~~~~~-----------ifst~l~P~~~aaa~aal~~l~~~~~~---~~~l~~~~~~~~~~~~-~~~--g-~--~~~s~ 311 (381)
...-|++ +|.| +|-.........++-+++.-.+ .++-.+.+.++-.... ..+ + . ...|.
T Consensus 217 ~~~iP~~l~y~~~~~~~Sl~NT-Pp~f~iy~~~lvl~Wl~~~GGl~~~~~~n~~KA~lLY~~iD~s~fy~~~v~~~~RS~ 295 (360)
T PRK05355 217 LPNIPSMLDYKTHADNDSMYNT-PPTFAIYLAGLVFKWLKEQGGVAAIEKRNQEKAALLYDAIDSSDFYRNPVAPENRSR 295 (360)
T ss_pred CCCCCCHHHHHHHHHHCCCCCC-CCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCC
T ss_conf 6689605309999863676668-842899999999999986176999999999989999999860786358898565686
Q ss_pred -EEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf -2899958979999999999977918986228888888703999628789999999999999999887
Q gi|254780486|r 312 -IQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 312 -I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
-+++.++|+.....+.++..++|+.- .-.+..| +.+|.++--..+.|+++.+++-+++--++
T Consensus 296 mNV~F~~~~~~l~~~Fl~~a~~~Gl~~-LkGhRsv----GG~RaSlYNa~~~e~V~~L~~fm~~F~~~ 358 (360)
T PRK05355 296 MNVPFTLADEELDKKFLAEAEAAGLVG-LKGHRSV----GGMRASIYNAMPLEGVQALVDFMKEFEKR 358 (360)
T ss_pred CEEEEECCCHHHHHHHHHHHHHCCCCC-CCCCCCC----CCEEEEECCCCCHHHHHHHHHHHHHHHHH
T ss_conf 544787187778999999999879866-6687653----85278801799999999999999999996
No 349
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=97.50 E-value=0.009 Score=37.42 Aligned_cols=283 Identities=13% Similarity=0.075 Sum_probs=133.5
Q ss_pred CHHHHHHHHHHHHHCCCCC---EEEECCCCHHHHH-HHHHHCCC--CCCCCHHHHCCHH---HHHHHHHCCCCCEEECCC
Q ss_conf 5899999999840128885---1674166024565-56663168--9710045420267---752666408764030568
Q gi|254780486|r 74 YNQHLELEEEAADFFGFEK---MLYFGSGYAANMA-ILSTLPQA--TDLIVYDKLVHAS---IREGINSGKAQAIAIPHN 144 (381)
Q Consensus 74 ~~~~~~lE~~lA~~~g~e~---al~~~sG~~An~~-~i~~l~~~--~d~ii~D~~~HaS---i~~g~~ls~a~~~~f~Hn 144 (381)
..++.+.|+.+.++++.|+ .++++.|-..... +...|.++ -++++........ .....++....++.-.+.
T Consensus 47 ~~i~~~a~~~lr~Ll~iPddY~Vlfl~GGaT~qf~~i~~nLl~~~~~~~~~~G~fs~kwa~~a~~~~~~~~~~v~~a~~g 126 (381)
T PRK03080 47 KAKLGEAIDGTRELLSLPADYEVGIVPGSDTGAVEMALWSLLGARRVDHLAWESFGAKWATDVVKQLKLEDPRVLKADYG 126 (381)
T ss_pred HHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHCCCCCEEEECCCC
T ss_conf 99999999999999589998479996784679999998745577777278743144699999997436676158705777
Q ss_pred CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCC
Q ss_conf 81478997643100024786079714621576613468999998631360898613112223477764011000013465
Q gi|254780486|r 145 NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNV 224 (381)
Q Consensus 145 D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~ 224 (381)
.+-++.. .... ..-.+.--|.++ |...|.. ..+.+..+.++++|=+=+++ + ..++...-+
T Consensus 127 ~iP~~~~----~~~~--~d~~~t~NeTi~---Gv~~p~~--~~~~~~~~~llv~D~SS~i~--s-------~~iD~sk~d 186 (381)
T PRK03080 127 ELPDLSA----VDFD--VDVVFTWNGTTS---GVRVPNA--DWIGADREGLTICDATSAAF--A-------LPLDWAKLD 186 (381)
T ss_pred CCCCHHH----CCCC--CCEEEEECCCEE---EEECCCC--CCCCCCCCCCEEEECHHHHC--C-------CCCCHHHCC
T ss_conf 7888123----3765--647987356401---0874676--77888888627874324443--6-------767855742
Q ss_pred CCCCCCCCCCCCEEE--EEECCCCCCCCCCCCCC----------------------CEECCCCCCCCHHHHHHHHHHHHH
Q ss_conf 210013465653026--75245100100001211----------------------000013577502578988789886
Q gi|254780486|r 225 IVMHSCSKALGSSGA--LVGSNKIIYDYLINYAK----------------------PFIYTTSPSPILAVVACEALKLIK 280 (381)
Q Consensus 225 iv~~TlsKa~g~~GG--~i~~~~~ii~~l~~~~~----------------------~~ifst~l~P~~~aaa~aal~~l~ 280 (381)
++..+-=|.+|+-|| .+.-++..++.+....+ ..+|- .+|-.........|+-++
T Consensus 187 viyagaQKnlG~~aGl~vvI~sp~al~r~~~~~~~r~iP~~l~~~~~~~a~e~~~~~s~~N-TPp~f~iy~~~~~l~Wl~ 265 (381)
T PRK03080 187 VYTFSWQKVLGGEGGHGMLILSPRAVERLESYAPAWPLPKIFRLTKGGKLIENIFKGQTIN-TPSMLTVEDYLDQLDWAK 265 (381)
T ss_pred EEEEEECCCCCCCCCEEEEEECHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCC-CCHHHHHHHHHHHHHHHH
T ss_conf 7998700025787742799976999988861388778844642455788876465346489-961899999999999999
Q ss_pred HCCCH---HHHHHHHHHHHHHHHHCCC---CC--C--CCCC-EEEEEECCHHH-----HHHHHHHHHHCCEEEEEECCCC
Q ss_conf 27102---2478999999998764179---78--9--9897-28999589799-----9999999997791898622888
Q gi|254780486|r 281 RKPAL---HKSLLQLINITDKIANKKI---GF--S--SQSH-IQSIVIGDNKS-----CLNIAKNLQKKGFDIRAIRPPT 344 (381)
Q Consensus 281 ~~~~~---~~~l~~~~~~~~~~~~~~~---g~--~--~~s~-I~~v~~gd~~~-----a~~~~~~L~~~Gi~v~~i~~Pt 344 (381)
+.-.+ .++-+++...+.......- .+ + ..|. .+++.+.|+.. ...+...+.+++..+..-.|..
T Consensus 266 ~~GGl~~~~~rn~~ka~lLY~~id~s~~~~~~v~d~~~RS~~nv~f~~~d~~~~~~~~~~~~~~~l~~e~g~~di~ghR~ 345 (381)
T PRK03080 266 SIGGLDALIARTAANSSVLYDWAEKTPWATPLAADPATRSNTSVCLDFVDPADAQAAFDKALVAKLLRENGAVDIGPYRD 345 (381)
T ss_pred HCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHCCEECCCCCCC
T ss_conf 72889999999999999999999708874336688445237648999458055479999999999998298745655356
Q ss_pred CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 888870399962878999999999999999988738
Q gi|254780486|r 345 VPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 345 Vp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
..+.+|+.+-...+.+|++.++.-|+=+..++.
T Consensus 346 ---~~~GlR~s~y~av~~~dv~aL~~~ld~~~~~~~ 378 (381)
T PRK03080 346 ---APNGLRIWCGATVEPSDVEALTPWLDWAFERLK 378 (381)
T ss_pred ---CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf ---898558883277899999999999999999986
No 350
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=97.28 E-value=0.017 Score=35.74 Aligned_cols=318 Identities=17% Similarity=0.235 Sum_probs=151.8
Q ss_pred CEEEECCCCCCCCCCC-CHHHHHHHHHHHHHHCCCCCCCCCC-CCCC----CHHHHHHHHHHHHHCCCC---CEEEECCC
Q ss_conf 7689803446566779-8899999999998637868872244-3688----589999999984012888---51674166
Q gi|254780486|r 29 QDIWDFTSHDYLALSS-STLLREKILSSLDSKIPIGSGGSRL-LCGN----YNQHLELEEEAADFFGFE---KMLYFGSG 99 (381)
Q Consensus 29 ~~~l~f~s~dYLGl~~-~p~v~~a~~~a~~~~~g~~~~~sr~-~~G~----~~~~~~lE~~lA~~~g~e---~al~~~sG 99 (381)
.+..||++ |=+. .|+|.+.+.+.+....|.|.+ -+ +|=. ..++.+.|+.+.++++-| ..++++.|
T Consensus 4 ~~~~nFsa----GPa~lp~~vL~~a~~e~~~~~g~g~s--vme~SHRsk~~~~v~~~a~~~lreLl~iPd~Y~VlflqGG 77 (365)
T COG1932 4 PRVYNFSA----GPAALPPEVLQQAQKELLDWNGLGMS--VMEISHRSKEFKNVLEEAEKDLRELLNIPDDYKVLFLQGG 77 (365)
T ss_pred CCCCCCCC----CCCCCCHHHHHHHHHHHHHHCCCCCC--EEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCC
T ss_conf 77888788----85248989999999988634167863--0122133388899999999989999579987469997485
Q ss_pred CHHHHHHHH-HHCC-CCC-CCCHHHHCCHHHHHHHHHCCCCCEE-EC--CCCHHHHHHHHHHHHHCCCCCCCEE-EE--C
Q ss_conf 024565566-6316-897-1004542026775266640876403-05--6881478997643100024786079-71--4
Q gi|254780486|r 100 YAANMAILS-TLPQ-ATD-LIVYDKLVHASIREGINSGKAQAIA-IP--HNNINSFAENINKWRKSGGKGFPWI-VV--E 170 (381)
Q Consensus 100 ~~An~~~i~-~l~~-~~d-~ii~D~~~HaSi~~g~~ls~a~~~~-f~--HnD~~~Le~~l~~~~~~~~~~~~~v-v~--e 170 (381)
-.+..+.++ .|.+ ++. .|..-.-...+.-.+-+.+...... -+ -++..++-. +.+..- .+.-..| .+ |
T Consensus 78 at~qf~~~p~nLl~~~~~~yv~~g~Ws~~a~~eA~~~~~~~~~~~~~~~~~~~~~iP~-~~~~~~--~~~~ayv~~~~Ne 154 (365)
T COG1932 78 ATGQFAMAPMNLLGKRGTDYVDTGAWSEFAIKEAKKVGKQPKLIDARIEEAGYGSIPD-LSKWDF--SDNDAYVHFCWNE 154 (365)
T ss_pred CHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCC-HHHCCC--CCCCCEEEEECCC
T ss_conf 3789998888642135750576621457689999986456531232000267667998-221466--7775579993488
Q ss_pred CCCCCCCCH-HHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCCCCCCCCCCCCCCEE-EEEECCCCCC
Q ss_conf 621576613-46899999863136089861311222347776401100001346521001346565302-6752451001
Q gi|254780486|r 171 SIYSMDGDK-APLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNVIVMHSCSKALGSSG-ALVGSNKIIY 248 (381)
Q Consensus 171 gv~Sm~G~~-apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~iv~~TlsKa~g~~G-G~i~~~~~ii 248 (381)
.+ +|.- .+++.+ .. +.+++.|-+-+ +++ -..+...-+++...--|-+|..| +.+.-++++.
T Consensus 155 Ti---~Gv~v~~~p~~---~~--~~~~v~D~SS~--ils-------r~iDvsk~dviyagaQKnlGpaGltvvIvr~~~l 217 (365)
T COG1932 155 TI---SGVEVPELPDI---GS--DGLLVADASSA--ILS-------RPIDVSKYDVIYAGAQKNLGPAGLTVVIVRPDLL 217 (365)
T ss_pred CC---CCEECCCCCCC---CC--CCEEEEECCCH--HHC-------CCCCHHHCCEEEEEHHHCCCCCCEEEEEECHHHH
T ss_conf 61---21571688988---87--76089965627--755-------7777567135887621125765539999868997
Q ss_pred CCCCCC-CCC-E-----ECCCCC--CCCHHH--HHHHHHHHHHHCCC---HHHHHHHHHHHHHHHHHCCCCC-------C
Q ss_conf 000012-110-0-----001357--750257--89887898862710---2247899999999876417978-------9
Q gi|254780486|r 249 DYLINY-AKP-F-----IYTTSP--SPILAV--VACEALKLIKRKPA---LHKSLLQLINITDKIANKKIGF-------S 307 (381)
Q Consensus 249 ~~l~~~-~~~-~-----ifst~l--~P~~~a--aa~aal~~l~~~~~---~~~~l~~~~~~~~~~~~~~~g~-------~ 307 (381)
+.+.+. .++ | ++..++ .|++.+ ...-+++-++++-. +.++-+++.+.+....... +| .
T Consensus 218 ~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ka~~LY~~id~s-~fy~~~v~~~ 296 (365)
T COG1932 218 ERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQAKAQLLYDWIDKS-DFYRNLVAKA 296 (365)
T ss_pred HCCCCCCCCHHHHCHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC-CCCCCCCCHH
T ss_conf 011356896176431211048842784899999999999999974999999998899899999998727-7533445521
Q ss_pred CCCC-EEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 9897-2899958979999999999977918986228888888703999628789999999999999999887
Q gi|254780486|r 308 SQSH-IQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 308 ~~s~-I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
..|. -+++.+.+++....+..++.++|+..--- .-+| +.+|+++-.+...|+++.+++-+++...+
T Consensus 297 ~RS~mnV~f~~~~~~ld~~fv~eae~~gl~~lkG-hr~v----gGmRasiynA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 297 NRSRMNVTFTLVDAELDKGFVAEAEAAGLIYLKG-HRSV----GGLRASIYNAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred HCCCEEEEEECCCHHHHHHHHHHHHHCCCCEECC-CCCC----CCEEEEEECCCCHHHHHHHHHHHHHHHHH
T ss_conf 2153268987273777799999999737741026-6477----86166543577889999999999999986
No 351
>TIGR00614 recQ_fam ATP-dependent DNA helicase, RecQ family; InterPro: IPR004589 The ATP-dependent DNA helicase RecQ (3.6.1 from EC) is involved in genome maintenance . All homologues tested to date unwind paired DNA, translocating in a 3' to 5' direction and several have a preference for forked or 4-way DNA structures (e.g. Holliday junctions) or for G-quartet DNA. The yeast protein, Sgs1, is present in numerous foci that coincide with sites of de novo synthesis DNA, such as the replication fork, and protein levels peak during S-phase. A model has been proposed for Sgs1p action in the S-phase checkpoint response, both as a 'sensor' for damage during replication and a 'resolvase' for structures that arise at paused forks, such as the four-way 'chickenfoot' structure. The action of Sgs1p may serve to maintain the proper amount and integrity of ss DNA that is necessary for the binding of RPA (replication protein A, the eukaryotic ss DNA-binding protein)DNA pol complexes. Sgs1p would thus function by detecting (or resolving) aberrant DNA structures, and would thus contribute to the full activation of the DNA-dependent protein kinase, Mec1p and the effector kinase, Rad53p. Its ability to bind both the large subunit of RPA and the RecA-like protein Rad51p, place it in a unique position to resolve inappropriate fork structures that can occur when either the leading or lagging strand synthesis is stalled. Thus, RecQ helicases integrate checkpoint activation and checkpoint response. ; GO: 0008026 ATP-dependent helicase activity, 0006310 DNA recombination.
Probab=96.45 E-value=0.079 Score=31.53 Aligned_cols=255 Identities=24% Similarity=0.215 Sum_probs=133.3
Q ss_pred HHHHHHHHHCCC-CCEEEECCCCHHHHHH-HHHHCCCCCCCCHHHHCCHHHH------------HHHHHCCCCCEEECCC
Q ss_conf 999998401288-8516741660245655-6663168971004542026775------------2666408764030568
Q gi|254780486|r 79 ELEEEAADFFGF-EKMLYFGSGYAANMAI-LSTLPQATDLIVYDKLVHASIR------------EGINSGKAQAIAIPHN 144 (381)
Q Consensus 79 ~lE~~lA~~~g~-e~al~~~sG~~An~~~-i~~l~~~~d~ii~D~~~HaSi~------------~g~~ls~a~~~~f~Hn 144 (381)
++|--=+.+.|. |.-+++|+|+.=-++- +|+++-+|-.||+=.+. ||+ .++.|..++..
T Consensus 16 Q~e~I~~~L~g~RD~~vvMpTG~GKSLCYQ~Pa~~~~G~t~VIsPLi--SLm~DQV~~L~~~~i~A~~L~s~~s~----- 88 (497)
T TIGR00614 16 QLEVINAVLEGRRDCLVVMPTGGGKSLCYQLPALYSDGLTLVISPLI--SLMEDQVLQLKASGIPATFLNSSQSK----- 88 (497)
T ss_pred HHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEECCHH--HHHHHHHHHHHHCCCCEECCCCCCCH-----
T ss_conf 89999987548975699815898603676405675089649973636--56899999987448630104432577-----
Q ss_pred CHHHHHHHHHHHHHCCCCCCCEEEE-CCCCCCCCCHHHHHHHHHHHHHCC-EEEEECCCCCCCCCCCCCCEEEEEHHC--
Q ss_conf 8147899764310002478607971-462157661346899999863136-089861311222347776401100001--
Q gi|254780486|r 145 NINSFAENINKWRKSGGKGFPWIVV-ESIYSMDGDKAPLDDLVKIANDYD-GFIVVDEAHATGVCGPLGKGLTHIIEE-- 220 (381)
Q Consensus 145 D~~~Le~~l~~~~~~~~~~~~~vv~-egv~Sm~G~~apL~~i~~l~~~y~-~~LivDEah~~Gv~G~~G~G~~~~~~~-- 220 (381)
++-...+....++.++-+.+.|| |-|- .+..=|..|-.+=.+.+ +++.|||||-+.=-|..=|--...+|.
T Consensus 89 --~~~~~v~~~~~~k~g~~kllYvtPE~~~---~~~~ll~~Le~~Y~~~~~~~iAvDEAHCiSqWGHDFR~~Y~~LG~Lk 163 (497)
T TIGR00614 89 --EQQKEVLTDLSKKDGKLKLLYVTPEKIS---KSKSLLQTLEKLYERKGITLIAVDEAHCISQWGHDFRPDYKALGSLK 163 (497)
T ss_pred --HHHHHHHHHHHHHCCCEEEEEECHHHHH---CCHHHHHHHHHHHHHCCCEEEEEECEEEECCCCCCCCHHHHHHHHHH
T ss_conf --8999999998730797589971634653---46478999999886449669998321543588887407999965788
Q ss_pred --CCCCCCCCCCCCCCCCEEEEEEC---CCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
Q ss_conf --34652100134656530267524---5100100001211000013577502578988789886271022478999999
Q gi|254780486|r 221 --RNNVIVMHSCSKALGSSGALVGS---NKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINI 295 (381)
Q Consensus 221 --~~~~iv~~TlsKa~g~~GG~i~~---~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~ 295 (381)
.|.+-+| || -+.|. ..++...|. -..|++|+++..-|... +++.+....-.+-+.++.++
T Consensus 164 ~~fP~vP~~-----AL----TATA~~~~~~Di~~~L~-l~~p~~~~~SFdRPNl~-----y~v~~K~~n~~~~~~dl~~f 228 (497)
T TIGR00614 164 QKFPNVPIM-----AL----TATASPSVREDILRILN-LKNPQVFITSFDRPNLY-----YEVRRKTSNTKKILEDLLRF 228 (497)
T ss_pred HHCCCCCEE-----EE----ECCCCHHHHHHHHHHHC-CCCCCEEEECCCCCCCE-----EEEECCCCCHHHHHHHHHHH
T ss_conf 854887436-----43----40578678999998722-13662464046687630-----34005789702589999999
Q ss_pred HHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEE-----------------------------ECCCCCC
Q ss_conf 99876417978998972899958979999999999977918986-----------------------------2288888
Q gi|254780486|r 296 TDKIANKKIGFSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRA-----------------------------IRPPTVP 346 (381)
Q Consensus 296 ~~~~~~~~~g~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~-----------------------------i~~PtVp 346 (381)
..+.......+.+.|-| |++..-..+-.++..|.+.||.+.. |.|=. .
T Consensus 229 ~~~~~~s~~~~~G~sGI--IYC~SR~~~e~~a~~L~~~G~~a~aYHAGl~~~~R~~V~~~f~nrD~~QvVvATvAFGM-G 305 (497)
T TIGR00614 229 IVKKASSAWEFKGKSGI--IYCPSRKKSEQVAAELQKLGIAAGAYHAGLEISARKEVQHKFQNRDEIQVVVATVAFGM-G 305 (497)
T ss_pred HHHHCCCCCCCCCCCEE--EECCCCHHHHHHHHHHHHCCCEEEHHHCCCCHHHHHHHHHHHHCCCCCEEEEEEEECCC-C
T ss_conf 87520356524588302--75287234899999997558610024026886477899998750388579998721268-8
Q ss_pred CCCCEEEEECCCCCCHH
Q ss_conf 88703999628789999
Q gi|254780486|r 347 INTARLRISITLNVDEP 363 (381)
Q Consensus 347 ~~~~rlRi~v~a~~t~e 363 (381)
.+++=+|+++|....++
T Consensus 306 InKpdvRfViH~~~Pk~ 322 (497)
T TIGR00614 306 INKPDVRFVIHYSLPKS 322 (497)
T ss_pred CCCCCCCEEEEECCCCC
T ss_conf 87635367885078856
No 352
>KOG1412 consensus
Probab=95.18 E-value=0.27 Score=28.19 Aligned_cols=299 Identities=16% Similarity=0.180 Sum_probs=143.3
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHCCCC--------CCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHH
Q ss_conf 465667798899999999998637868--------872244368858999999998401288851674166024565566
Q gi|254780486|r 37 HDYLALSSSTLLREKILSSLDSKIPIG--------SGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILS 108 (381)
Q Consensus 37 ~dYLGl~~~p~v~~a~~~a~~~~~g~~--------~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~ 108 (381)
.+||++..+|.++.++.+-+ +|.. ..|..-++|+-.++... +.|+.|+... .+.+++-+..|
T Consensus 68 HEYLpi~Gl~~F~~~A~el~---lg~~s~a~kE~Rv~~vQslsGTGAl~~~A-~Fl~~~~~~~-~VY~SnPTW~n----- 137 (410)
T KOG1412 68 HEYLPILGLPTFTKAATELL---LGADSPAIKEDRVFGVQSLSGTGALRIAA-DFLATFYNKN-TVYVSNPTWEN----- 137 (410)
T ss_pred CHHCCCCCCHHHHHHHHHHH---CCCCCHHHHHCCCCCEEECCCCCHHHHHH-HHHHHHCCCC-EEEECCCCHHH-----
T ss_conf 11133148635666658770---07885343322112024215653245667-8888752465-26743886067-----
Q ss_pred HHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCC--HHHHHHHHHHHHHCCCCCCCEEEECCCC---CCCCCHHHHH
Q ss_conf 6316897100454202677526664087640305688--1478997643100024786079714621---5766134689
Q gi|254780486|r 109 TLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHNN--INSFAENINKWRKSGGKGFPWIVVESIY---SMDGDKAPLD 183 (381)
Q Consensus 109 ~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD--~~~Le~~l~~~~~~~~~~~~~vv~egv~---Sm~G~~apL~ 183 (381)
|.-|+.-+-......++|..++ .-|+|..|.....+ |...++|+----+ .||-+----+
T Consensus 138 ---------------H~~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~A-Pe~si~iLhaCAhNPTGmDPT~EQW~ 201 (410)
T KOG1412 138 ---------------HHAIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESA-PEGSIIILHACAHNPTGMDPTREQWK 201 (410)
T ss_pred ---------------HHHHHHHCCCCEEEEEEEECCCCCEECHHHHHHHHHHC-CCCCEEEEECCCCCCCCCCCCHHHHH
T ss_conf ---------------78899873884455666315777121399999898638-98737862001369878997889999
Q ss_pred HHHHHHHHCCEEEEECCCC-CCCCCCCCCC--EEEEEHHCC-CCCCCCCCCCCCCCCEE------EEEECCCCCCCCCCC
Q ss_conf 9999863136089861311-2223477764--011000013-46521001346565302------675245100100001
Q gi|254780486|r 184 DLVKIANDYDGFIVVDEAH-ATGVCGPLGK--GLTHIIEER-NNVIVMHSCSKALGSSG------ALVGSNKIIYDYLIN 253 (381)
Q Consensus 184 ~i~~l~~~y~~~LivDEah-~~Gv~G~~G~--G~~~~~~~~-~~~iv~~TlsKa~g~~G------G~i~~~~~ii~~l~~ 253 (381)
+|.+.-++-+..-++|-|+ ||- -|+--+ ....++... ...++..||+|-||..+ -+|.-++..+..+..
T Consensus 202 qia~vik~k~lf~fFDiAYQGfA-SGD~~~DawAiR~fV~~g~e~fv~QSFaKNfGlYneRvGnltvv~~n~a~i~~v~S 280 (410)
T KOG1412 202 QIADVIKSKNLFPFFDIAYQGFA-SGDLDADAWAIRYFVEQGFELFVCQSFAKNFGLYNERVGNLTVVVNNPAVIAGVKS 280 (410)
T ss_pred HHHHHHHHCCCEEEEEHHHCCCC-CCCCCCCHHHHHHHHHCCCEEEEEHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHH
T ss_conf 99999974476035420210124-69954108999999961873887766564316646553636999447557777887
Q ss_pred CCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH------------HHHHHHHHCCCCCCCC-CCEE---EE--
Q ss_conf 2110000135775025789887898862710224789999------------9999876417978998-9728---99--
Q gi|254780486|r 254 YAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLI------------NITDKIANKKIGFSSQ-SHIQ---SI-- 315 (381)
Q Consensus 254 ~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~------------~~~~~~~~~~~g~~~~-s~I~---~v-- 315 (381)
...-.+-++-.+|+. ..+.-+-++| +.|++++.-.+.+ ++++.+. .++-++. -+|+ .+
T Consensus 281 Ql~lviR~~~SNPPA-yGArIV~kvL-~tP~lre~W~~sik~MssRI~~MR~aLrd~L~--aL~TPGtWDHI~~QiGMFS 356 (410)
T KOG1412 281 QLTLVIRSNWSNPPA-YGARIVHKVL-STPELREQWIQSIKTMSSRIKKMRTALRDHLV--ALKTPGTWDHITQQIGMFS 356 (410)
T ss_pred HHHHHHHHCCCCCCC-HHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HCCCCCCHHHHHHHCCCEE
T ss_conf 779988612678851-1458999984-68888999999999999999999999999998--6189985778876505143
Q ss_pred EECCHHHHHHHHHHHHH-CCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 95897999999999997-7918986228888888703999628789999999999999999887387
Q gi|254780486|r 316 VIGDNKSCLNIAKNLQK-KGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGNS 381 (381)
Q Consensus 316 ~~gd~~~a~~~~~~L~~-~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~s 381 (381)
+.|-.. .-.+.|.+ +.||..+ .+ ||.+. ..+...+|....+|++.+.+..|
T Consensus 357 yTGLtp---~qV~~li~~h~vyLl~---------~G--RInis-GLN~~NveyVAkAIde~Vr~~~~ 408 (410)
T KOG1412 357 YTGLTP---AQVDHLIENHKVYLLS---------DG--RINIS-GLNMKNVEYVAKAIDETVRAIKS 408 (410)
T ss_pred ECCCCH---HHHHHHHHHCEEEEEC---------CC--CEEEE-CCCCCCHHHHHHHHHHHHHHHCC
T ss_conf 148998---9999998736389943---------88--37661-45654589999999999975236
No 353
>PRK11057 ATP-dependent DNA helicase RecQ; Provisional
Probab=94.78 E-value=0.35 Score=27.51 Aligned_cols=61 Identities=10% Similarity=0.061 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHH-HHHHCCCCCCCCH
Q ss_conf 9999999986378688722443688589999999984012888516741660245655-6663168971004
Q gi|254780486|r 49 REKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAI-LSTLPQATDLIVY 119 (381)
Q Consensus 49 ~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~-i~~l~~~~d~ii~ 119 (381)
...+.+.+.+.||... +.. .+.|---+-+-|.+--.++|+|+.=-++- +|++..++-.|++
T Consensus 10 ~~~a~~~L~~~FG~~~---------Fr~-~Q~e~i~~~l~g~D~l~~mpTG~GKSlcyQlPal~~~g~tiVi 71 (607)
T PRK11057 10 ESGAKQVLQETFGYQQ---------FRP-GQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALVLDGLTLVV 71 (607)
T ss_pred HHHHHHHHHHHCCCCC---------CCH-HHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHCCCCEEEE
T ss_conf 7799999998669843---------457-6999999998699889987899559799999998779988998
No 354
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase; InterPro: IPR013441 Tyrosine phenol-lyases (4.1.99.2 from EC) (beta-tyrosinase), are pyridoxal-phosphate enzymes which are closely related to tryptophanase (4.1.99.1 from EC) (see IPR013441 from INTERPRO). Both belong to the beta-eliminating lyase family.; GO: 0050371 tyrosine phenol-lyase activity.
Probab=94.35 E-value=0.44 Score=26.88 Aligned_cols=351 Identities=15% Similarity=0.170 Sum_probs=177.6
Q ss_pred HHHHHHHHHHHHCCCEEEECCCCE-EEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 899999999997598399928976-8980344656677988999999999986378688722443688589999999984
Q gi|254780486|r 7 SFYEERLQKIKSKGRHRQLLRRQD-IWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAA 85 (381)
Q Consensus 7 ~~~~~~l~~~~~~g~~~~~~~~~~-~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA 85 (381)
.--+.+.+.++..|-.--+.+.++ ++|+ .++.. ..+.. +++|+.-..|--...|. .-+-.||+.+.
T Consensus 15 ~~r~~r~~~~~~aGyntfll~s~~~yidl--------ltdsG-t~ams---d~qW~~lm~GdeayaG~-~~f~~l~~~v~ 81 (450)
T TIGR02618 15 TTREEREKKMKEAGYNTFLLNSEDVYIDL--------LTDSG-TNAMS---DKQWAGLMMGDEAYAGS-RNFFHLEEVVR 81 (450)
T ss_pred CCHHHHHHHHHHCCCCEEEECCCCEEEEE--------ECCCC-CCHHH---HHHHHHHEECCHHHHHH-HHHHHHHHHHH
T ss_conf 32578999997457403543023135663--------20356-30111---12122100111022325-88899999999
Q ss_pred HHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCH-----HHHCCHHH---------HHHHHHCCCCCEEECCC-CHHHHH
Q ss_conf 0128885167416602456556663168971004-----54202677---------52666408764030568-814789
Q gi|254780486|r 86 DFFGFEKMLYFGSGYAANMAILSTLPQATDLIVY-----DKLVHASI---------REGINSGKAQAIAIPHN-NINSFA 150 (381)
Q Consensus 86 ~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~-----D~~~HaSi---------~~g~~ls~a~~~~f~Hn-D~~~Le 150 (381)
+++|+...+-..-|-.|..-+-..+.+|++.|-. -...|--. +|-+.-++ --.+|+-| |+..|+
T Consensus 82 e~yGfk~~vPthqGrGae~l~s~~~ikPG~y~~Gnmyftttr~hqe~~G~~fvd~~~deahd~~-~~~~fkG~~d~~kl~ 160 (450)
T TIGR02618 82 ELYGFKYVVPTHQGRGAENLLSRILIKPGDYVPGNMYFTTTRAHQEKNGATFVDIIIDEAHDAQ-LDLPFKGNVDVKKLQ 160 (450)
T ss_pred HHCCCEEEECCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHCCCEEEEEEEECCCCCC-CCCCCCCCCHHHHHH
T ss_conf 8717225630667764788998863168870135400110011342058769998742344533-673435750089999
Q ss_pred HHHHHHHHCCCCCCCEEEEC-CCCCCCC----CHHHHHHHHHHHHHCCEEEEECCCCCCC---CCCCCCCEEEEEHHCCC
Q ss_conf 97643100024786079714-6215766----1346899999863136089861311222---34777640110000134
Q gi|254780486|r 151 ENINKWRKSGGKGFPWIVVE-SIYSMDG----DKAPLDDLVKIANDYDGFIVVDEAHATG---VCGPLGKGLTHIIEERN 222 (381)
Q Consensus 151 ~~l~~~~~~~~~~~~~vv~e-gv~Sm~G----~~apL~~i~~l~~~y~~~LivDEah~~G---v~G~~G~G~~~~~~~~~ 222 (381)
+++++.-+. ..+.|.+- .|. |.| .++++.++.++|++||..++.|-.-..- ++-+.-.++.+. .+.+
T Consensus 161 ~lid~~Ga~---~i~yi~~a~tvn-laGGqPvsman~r~v~~~~~~hGi~~~~datr~venayfike~e~~y~~~-~~~~ 235 (450)
T TIGR02618 161 KLIDEVGAD---KIPYICLAVTVN-LAGGQPVSMANLREVRKLCEKHGIKVFYDATRCVENAYFIKEREEGYKDK-SIKE 235 (450)
T ss_pred HHHHHHCCC---CCCEEEEEEEEE-ECCCCCHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHHHHHHHHHHCCCCC-HHHH
T ss_conf 998540411---024366666765-05887302787899999986468177621245566556443123000110-5899
Q ss_pred CCCCCC--------CCC-CC--CCCEEEEEECCCCCCCCCCCCCCCEECC-----CCCCCCHHHHHHHHHHHHHHCCCHH
Q ss_conf 652100--------134-65--6530267524510010000121100001-----3577502578988789886271022
Q gi|254780486|r 223 NVIVMH--------SCS-KA--LGSSGALVGSNKIIYDYLINYAKPFIYT-----TSPSPILAVVACEALKLIKRKPALH 286 (381)
Q Consensus 223 ~~iv~~--------Tls-Ka--~g~~GG~i~~~~~ii~~l~~~~~~~ifs-----t~l~P~~~aaa~aal~~l~~~~~~~ 286 (381)
|+-- |+| |- +-..|||++-+.+.+-. ...-.-.+|- +++..-.+.+....+.-.-+.+...
T Consensus 236 --i~~em~sy~dGCtmsGkkdClvniGGfl~~n~~~~~~-~a~e~vv~~eGmP~yGGlaGrdmea~a~G~~e~~~~~yi~ 312 (450)
T TIGR02618 236 --ILKEMMSYADGCTMSGKKDCLVNIGGFLCMNDDELFQ-KAKELVVVFEGMPSYGGLAGRDMEAMAIGIREAVDYEYIE 312 (450)
T ss_pred --HHHHHHHHHCCCCCCCCCCEEEECCCEEEECHHHHHH-HCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf --9999876405651247641156505246752289986-2056489971667657654200899998889887679999
Q ss_pred HHHHHHHHHHHHHHHCCCCC--CCCCCEEEE--------EECCHHHHHHHHH--------HHHHCCEEEEEECCCCCCC-
Q ss_conf 47899999999876417978--998972899--------9589799999999--------9997791898622888888-
Q gi|254780486|r 287 KSLLQLINITDKIANKKIGF--SSQSHIQSI--------VIGDNKSCLNIAK--------NLQKKGFDIRAIRPPTVPI- 347 (381)
Q Consensus 287 ~~l~~~~~~~~~~~~~~~g~--~~~s~I~~v--------~~gd~~~a~~~~~--------~L~~~Gi~v~~i~~PtVp~- 347 (381)
-++.+...+-+++...++++ +...+.+++ +..|.-.+..++. +-++||| ++.-+-+.+..
T Consensus 313 hr~~q~~yl~~~l~~aG~Piv~P~GGhavflda~~f~~h~~q~~fPaq~laa~~y~~~Gvr~merGi-~saGr~~~tG~~ 391 (450)
T TIGR02618 313 HRVKQVRYLGDKLKAAGVPIVKPVGGHAVFLDARKFLPHIPQDQFPAQALAAAIYVESGVRSMERGI-VSAGRNKKTGEH 391 (450)
T ss_pred HHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCHHHHCCC-EECCCCCCCCCC
T ss_conf 9999999999999855982440477400244488886314533340788998887740411121230-123777557654
Q ss_pred ---CCCEEEEEC-CCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf ---870399962-878999999999999999988738
Q gi|254780486|r 348 ---NTARLRISI-TLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 348 ---~~~rlRi~v-~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
.-+.+|+++ ....|...+|...+.+.++.++-+
T Consensus 392 ~~Pkle~vrltiPrrvyt~~h~d~va~~~~~l~~~~~ 428 (450)
T TIGR02618 392 HRPKLELVRLTIPRRVYTYAHLDVVADSIIKLYKHRD 428 (450)
T ss_pred CCCCEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 5884256765226123457788899999999984021
No 355
>pfam04864 Alliinase_C Allinase. Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesized from sulfoxide cysteine derivatives by alliinase (EC:4.4.1.4), whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system.
Probab=93.97 E-value=0.53 Score=26.41 Aligned_cols=169 Identities=12% Similarity=0.140 Sum_probs=80.0
Q ss_pred HHCCEEEEECCCCCCCCCCCCCCEEEEEHH---CCCCCCCCCCCCCCCCCEE---EE-EECCCCCCCCCCCCCCCEECCC
Q ss_conf 313608986131122234777640110000---1346521001346565302---67-5245100100001211000013
Q gi|254780486|r 190 NDYDGFIVVDEAHATGVCGPLGKGLTHIIE---ERNNVIVMHSCSKALGSSG---AL-VGSNKIIYDYLINYAKPFIYTT 262 (381)
Q Consensus 190 ~~y~~~LivDEah~~Gv~G~~G~G~~~~~~---~~~~~iv~~TlsKa~g~~G---G~-i~~~~~ii~~l~~~~~~~ifst 262 (381)
+.-++.+|-|=|+ |=| ++.+ ..+.+|+.-||||..|-.| |+ +.-++++.+.+..+..-. |.
T Consensus 159 ~g~~~k~i~D~aY----YWP------hyTpIt~~aD~DIMLFTlSK~TGHAGsRiGWALVKD~~VakkM~~y~~lN--t~ 226 (363)
T pfam04864 159 DGSEAKVIHDLAY----YWP------HYTPITYPADEDIMLFTMSKYTGHAGSRFGWALVKDEEVAKKMVEYIELN--TI 226 (363)
T ss_pred CCCCCEEEEEEEE----ECC------CCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEEECCHHHHHHHHHHHHHC--CC
T ss_conf 6998418875200----066------66676777767679898612236762523478863799999999997650--53
Q ss_pred CCCCCHHHHHHHHHHHHHH----CCC---H----HHHHHHHHHHHHHHH-H-CCCCC---C-----------CCCCEEE-
Q ss_conf 5775025789887898862----710---2----247899999999876-4-17978---9-----------9897289-
Q gi|254780486|r 263 SPSPILAVVACEALKLIKR----KPA---L----HKSLLQLINITDKIA-N-KKIGF---S-----------SQSHIQS- 314 (381)
Q Consensus 263 ~l~P~~~aaa~aal~~l~~----~~~---~----~~~l~~~~~~~~~~~-~-~~~g~---~-----------~~s~I~~- 314 (381)
+.+--.-..+++-|+.+.+ ... + ++.+++.-+.+.... . ....+ . .++|-..
T Consensus 227 GvS~dSQlRa~kiLkvv~~~~~~~~~~~~iF~fg~~~m~~RW~~L~~~v~~S~~FsL~~~~p~yC~ff~~~~~~sPafaW 306 (363)
T pfam04864 227 GVSKESQLRTLKILKVVLATCKTESGTMGFFDFGYQTMRERWERLRELVSSSTRFSLQKLPPEYCNYFKKIREPSPAYAW 306 (363)
T ss_pred CCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCEEE
T ss_conf 06889999999999999976326766235789999999999999999971158077267787766542321689986379
Q ss_pred EEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHH
Q ss_conf 9958979999999999977918986228888888703999628789999999999999999
Q gi|254780486|r 315 IVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQI 375 (381)
Q Consensus 315 v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v 375 (381)
+-+..+ .-.+-..-|+++||..++-..= .-+...+|+++ .-++++.|.+++.|++.
T Consensus 307 lkCe~e-ed~DC~~~L~~~~I~~r~G~~F--ga~~~YVRlSl--l~~~d~Fd~lleRL~~l 362 (363)
T pfam04864 307 LKCEWE-EDTDCYEVLREGKILTRSGERF--GADSRYVRLSL--IKTQDDFDQLLQRLKSL 362 (363)
T ss_pred EEECCC-CHHHHHHHHHHCCEECCCCCCC--CCCCCEEEEEE--ECCHHHHHHHHHHHHHH
T ss_conf 972663-2017999998788645687645--88987699984--06887899999999854
No 356
>TIGR02639 ClpA ATP-dependent Clp protease ATP-binding subunit ClpA; InterPro: IPR013461 Proteins in this entry are related to ClpA () from Escherichia coli. ClpA is an ATP-dependent chaperone and part of the ClpAP protease that participates in regulatory protein degradation and the dissolution and degradation of protein aggregates . ClpA recognises sequences in specific proteins, which it then unfolds in an ATP-dependent manner and transports into the degradation chamber of the associated ClpP protein , . A small adaptor-like protein, ClpS, modulates the activity of ClpA and is an important regulatory factor for this protein . It protects ClpA from autodegradation and appears to redirect its activity away from soluble proteins and toward aggregated proteins..
Probab=92.34 E-value=0.11 Score=30.60 Aligned_cols=48 Identities=31% Similarity=0.551 Sum_probs=35.4
Q ss_pred CCCCC-----------CCH-HHHHHHH-HHHHHCCE-EEEECCCCC-CCCCCCCCCEEEEEHHC
Q ss_conf 21576-----------613-4689999-98631360-898613112-22347776401100001
Q gi|254780486|r 172 IYSMD-----------GDK-APLDDLV-KIANDYDG-FIVVDEAHA-TGVCGPLGKGLTHIIEE 220 (381)
Q Consensus 172 v~Sm~-----------G~~-apL~~i~-~l~~~y~~-~LivDEah~-~Gv~G~~G~G~~~~~~~ 220 (381)
|||.| ||+ ..||+++ ||.++-|+ +|++||.|= +| -|.||.|..+..++
T Consensus 268 IY~LDmG~LLAGTKYRGDFE~RLK~V~~Ei~~~~~anILFIDEIHTIVG-AGATSGGsmDASNL 330 (774)
T TIGR02639 268 IYSLDMGTLLAGTKYRGDFEERLKAVVSEIEKEPNANILFIDEIHTIVG-AGATSGGSMDASNL 330 (774)
T ss_pred EEEECHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEE-CCCCCCHHHHHHHH
T ss_conf 4540434564102454247899999999985289995466411010331-78787515524432
No 357
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase; InterPro: IPR010107 This entry represents Glutamate decarboxylase (gad;) it is a pyridoxal 5'-phosphate (PLP)-dependent enzyme, which catalyses the irreversible alpha-decarboxylation of L-glutamate to gamma-aminobutyrate (GABA). This enzyme is widely distributed amongst eukaryotes and prokaryotes, but its function varies in different organisms . Gad has a crucial role in the vertebrate central nervous system where it is responsible for the synthesis of GABA, the major inhibitory neurotransmitter. In the majority of vertebrates Gad occurs in two isoforms, GAD65 and GAD67, both active at neutral pH . Gad isoforms (GadA and GadB) have also been reported in some bacterial species, including the Gram-negative bacterium and Gram-positive bacterium . A unique feature of plant and yeast Gad is the presence of a calmodulin (CaM)-binding domain in the C-terminal region. In Saccharomyces cerevisiae, Gad expression is required for normal oxidative stress tolerance . In plants, Gad is thought to be a stress-adapter chaperonin sensing Ca2+ signals.; GO: 0004351 glutamate decarboxylase activity, 0030170 pyridoxal phosphate binding, 0006536 glutamate metabolic process.
Probab=92.27 E-value=0.71 Score=25.60 Aligned_cols=330 Identities=18% Similarity=0.237 Sum_probs=172.7
Q ss_pred CCCCEEEECCCCCCCCCCC---CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH-HHHHH----HHHHCCCC---CEE
Q ss_conf 2897689803446566779---8899999999998637868872244368858999-99999----84012888---516
Q gi|254780486|r 26 LRRQDIWDFTSHDYLALSS---STLLREKILSSLDSKIPIGSGGSRLLCGNYNQHL-ELEEE----AADFFGFE---KML 94 (381)
Q Consensus 26 ~~~~~~l~f~s~dYLGl~~---~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~-~lE~~----lA~~~g~e---~al 94 (381)
.||.-.||++| |-+ +|+..+...+++. |=-+ -.. ..|.-. ++|.+ ||+++++| |.-
T Consensus 45 LDGNprLNLAs-----FV~Twme~EA~KLm~e~~~-KN~I------D~d-EYPqTar~i~~RCVnM~a~LfhAp~~~D~~ 111 (493)
T TIGR01788 45 LDGNPRLNLAS-----FVTTWMEPEAEKLMDETLN-KNMI------DKD-EYPQTAREIENRCVNMLADLFHAPALKDEE 111 (493)
T ss_pred CCCCHHHHHHC-----CCCCCCCHHHHHHHHHCCC-CCCC------CCC-CCCHHHHHHHHCCEEHHHHHHCCCCCCCCC
T ss_conf 57762223213-----2478777678999972557-7701------100-165448988504301234411478777877
Q ss_pred ---EECCCC----HHHH-HHH----------HHHCCCCC----CCCHHHHCCHHHHHHHHH--CCCCCEEECC-----CC
Q ss_conf ---741660----2456-556----------66316897----100454202677526664--0876403056-----88
Q gi|254780486|r 95 ---YFGSGY----AANM-AIL----------STLPQATD----LIVYDKLVHASIREGINS--GKAQAIAIPH-----NN 145 (381)
Q Consensus 95 ---~~~sG~----~An~-~~i----------~~l~~~~d----~ii~D~~~HaSi~~g~~l--s~a~~~~f~H-----nD 145 (381)
.+.+.+ .|.| |.+ .+..++.| -||+=..+|-|--.-||= -..+.++..| -|
T Consensus 112 ~~savGtsTiGSSEAiMLGGlAmK~rWr~R~~~~Gk~~d~kKPNlv~g~~vQVCWEKF~RYfdVE~R~VP~~~r~r~~i~ 191 (493)
T TIGR01788 112 AASAVGTSTIGSSEAIMLGGLAMKWRWRKRMKAAGKPADAKKPNLVMGSNVQVCWEKFARYFDVELREVPMDKRDRYVID 191 (493)
T ss_pred CCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEECCCEEEEEEEEEEEECCCCCCCCCC
T ss_conf 56643517732589999877775799999998638887878872360798616421220335540136720777760118
Q ss_pred HHHHHHHHHHHHHCCCCCCCEEEECCCCCC--CCCHHHHHHHHHHHHH----------CCEEEEECCCCCCCCCCCCCCE
Q ss_conf 147899764310002478607971462157--6613468999998631----------3608986131122234777640
Q gi|254780486|r 146 INSFAENINKWRKSGGKGFPWIVVESIYSM--DGDKAPLDDLVKIAND----------YDGFIVVDEAHATGVCGPLGKG 213 (381)
Q Consensus 146 ~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm--~G~~apL~~i~~l~~~----------y~~~LivDEah~~Gv~G~~G~G 213 (381)
++.+-+.+++. +|.|+ +|... +|.+=|+++|.++-++ +++-+.||-|=| |++-|.|--
T Consensus 192 Pe~~~~~vDEN-------TIGV~--~ILG~TyTG~yE~v~~lnD~L~~~~~~~PDWsg~d~PiHvDAASG-GFi~PFGfe 261 (493)
T TIGR01788 192 PEEVVDLVDEN-------TIGVV--AILGTTYTGEYEDVKALNDLLEELNAKTPDWSGWDIPIHVDAASG-GFIAPFGFE 261 (493)
T ss_pred HHHHHHHHCCC-------CCEEE--EECCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCC-CCCCCCCCC
T ss_conf 89999860767-------52488--874723258708889999999997427887477876647744678-811376635
Q ss_pred EEEEHHCCCC---------CCCCCCCCCCCCC--EE-EEEE-CCC-CCCCCCC---CC----CCCE--ECCCCCCCCHHH
Q ss_conf 1100001346---------5210013465653--02-6752-451-0010000---12----1100--001357750257
Q gi|254780486|r 214 LTHIIEERNN---------VIVMHSCSKALGS--SG-ALVG-SNK-IIYDYLI---NY----AKPF--IYTTSPSPILAV 270 (381)
Q Consensus 214 ~~~~~~~~~~---------~iv~~TlsKa~g~--~G-G~i~-~~~-~ii~~l~---~~----~~~~--ifst~l~P~~~a 270 (381)
-||..+.|+ |+=+-|=|-=||. .| |+|+ =++ .+-|-|+ |+ .++| =||-+.+ .+++
T Consensus 262 -kehmk~~PDl~WDFRLprV~SINvSGHKYGLvYPGvGWViWRd~e~LPeELiF~vnYLGg~~~tFtLNFSrp~~-qVia 339 (493)
T TIGR01788 262 -KEHMKVEPDLEWDFRLPRVKSINVSGHKYGLVYPGVGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPAN-QVIA 339 (493)
T ss_pred -CCCEEECCCEEECCCCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCHHHCEEECCCCCCCCCCCCCCCCCCCC-CHHH
T ss_conf -34115457126566178246870465512464766126887581137013111011026656543013557623-1136
Q ss_pred HHHHHHHHHHHC-CCHHHHHHHHHHHHH-HHHHC-CC-C-C-----------------------------CCCCCEEEEE
Q ss_conf 898878988627-102247899999999-87641-79-7-8-----------------------------9989728999
Q gi|254780486|r 271 VACEALKLIKRK-PALHKSLLQLINITD-KIANK-KI-G-F-----------------------------SSQSHIQSIV 316 (381)
Q Consensus 271 aa~aal~~l~~~-~~~~~~l~~~~~~~~-~~~~~-~~-g-~-----------------------------~~~s~I~~v~ 316 (381)
.=..=|++=++. ....+++.+.++++. ++... ++ | | ++.=|||+.-
T Consensus 340 QYYnFlRLG~~GYr~i~q~~~~vA~~La~~~~~~sklPG~Fe~~s~g~~sienDsaPksvkDYWehPqaY~~~~P~VaFr 419 (493)
T TIGR01788 340 QYYNFLRLGREGYRKIMQNLLDVAQYLAEEIAKLSKLPGPFEILSDGRESIENDSAPKSVKDYWEHPQAYKSGIPLVAFR 419 (493)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCCCCHHHHHCCCCCCCCCCCEEEEE
T ss_conf 44668850401348999989999999999999860699845887178754334567740123313641227897779885
Q ss_pred ECCHH-------HHHHHHHHHHHCCEEEEEECCCCCCC---CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 58979-------99999999997791898622888888---870399962878999999999999999988738
Q gi|254780486|r 317 IGDNK-------SCLNIAKNLQKKGFDIRAIRPPTVPI---NTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 317 ~gd~~-------~a~~~~~~L~~~Gi~v~~i~~PtVp~---~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
+.|.. ...+++++|+.||..|.+..=|.--. +-..+||++....+.+--+.|++=++.++++|+
T Consensus 420 LKd~~~~~Y~~Yt~~~ls~~LR~rGWiVPAYtlP~~~~GsDd~~v~RiVvRe~~~~d~A~~Li~D~~~~~~~L~ 493 (493)
T TIGR01788 420 LKDDADEEYTGYTLYDLSHKLRERGWIVPAYTLPKNAEGSDDIEVLRIVVREDFSRDLAELLIEDLEKALAYLE 493 (493)
T ss_pred CCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 36877888876789999998503473134788843356778727999987258984069999999999999719
No 358
>KOG1411 consensus
Probab=92.01 E-value=1 Score=24.62 Aligned_cols=243 Identities=18% Similarity=0.301 Sum_probs=113.9
Q ss_pred HHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCHHH----HHHHHHHHH
Q ss_conf 9984012888516741660245655666316897100454202677526664087640305688147----899764310
Q gi|254780486|r 82 EEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHNNINS----FAENINKWR 157 (381)
Q Consensus 82 ~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD~~~----Le~~l~~~~ 157 (381)
+.|+.|+. ...+..|+-+.+| |.-+ -..++..+..|+.-|... .+-.+....
T Consensus 138 ~Fl~~f~~-~~~I~ip~PTWgN--------------------h~~i---f~~ag~~~~~yrYyd~~t~gld~~g~ledl~ 193 (427)
T KOG1411 138 EFLARFYP-SRDIYIPDPTWGN--------------------HKNI---FKDAGLPVKFYRYYDPKTRGLDFKGMLEDLG 193 (427)
T ss_pred HHHHHHCC-CCCEEECCCCCCC--------------------CCCC---CCCCCCCEEEEEECCCCCCCCCHHHHHHHHH
T ss_conf 99986266-6615615875345--------------------6763---0025861256663054100135677899874
Q ss_pred HCCCCCCCEEEEC------CCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCC-CCCCCCEE--EE-EHHCCCCCCCC
Q ss_conf 0024786079714------621576613468999998631360898613112223-47776401--10-00013465210
Q gi|254780486|r 158 KSGGKGFPWIVVE------SIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGV-CGPLGKGL--TH-IIEERNNVIVM 227 (381)
Q Consensus 158 ~~~~~~~~~vv~e------gv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv-~G~~G~G~--~~-~~~~~~~~iv~ 227 (381)
.. +.+.++++-. || |-+....++|.++-++-+.+-++|-|+- |+ -|.--+-. .. +.....++++.
T Consensus 194 ~~-p~gs~ilLhaCaHNPTGv---DPt~eqw~ki~~~~~~k~~~pffDmAYQ-GfaSG~~d~DA~avR~F~~~g~~~~la 268 (427)
T KOG1411 194 EA-PEGSIILLHACAHNPTGV---DPTKEQWEKISDLIKEKNLLPFFDMAYQ-GFASGDLDKDAQAVRLFVEDGHEILLA 268 (427)
T ss_pred CC-CCCCEEEEEHHHCCCCCC---CCCHHHHHHHHHHHHHCCCCCHHHHHHC-CCCCCCCHHHHHHHHHHHHCCCCEEEE
T ss_conf 17-888489852210388788---9608889999987654035614665540-423587024578999998707756765
Q ss_pred CCCCCCCCCEE----EE--EECCCCCC----CCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHH-----------
Q ss_conf 01346565302----67--52451001----00001211000013577502578988789886271022-----------
Q gi|254780486|r 228 HSCSKALGSSG----AL--VGSNKIIY----DYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALH----------- 286 (381)
Q Consensus 228 ~TlsKa~g~~G----G~--i~~~~~ii----~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~----------- 286 (381)
.||+|-+|..| .+ |+.+.+.. ..++.-.||. ||+ ||..-|.+.+ .++ ++++++
T Consensus 269 QSyAKNMGLYgERvGa~svvc~~ad~A~rV~SQlk~liRpm-YSn--PP~hGArIv~--~Il-~d~~l~~~W~~evk~Ma 342 (427)
T KOG1411 269 QSYAKNMGLYGERVGALSVVCKDADEAKRVESQLKILIRPM-YSN--PPLHGARIVA--TIL-SDPDLKNQWLGEVKGMA 342 (427)
T ss_pred HHHHHHCCHHHHCCCEEEEEECCHHHHHHHHHHHHHHHCCC-CCC--CCCCCHHHHH--HCC-CCHHHHHHHHHHHHHHH
T ss_conf 55655232033203505787267888887887788886011-358--9865114555--404-77677778888899987
Q ss_pred HHHHHHHH-HHHHHHHCCCCCCCC-CCE---EEEEE--C-CHHHHHHHHHHH-HHCCEEEEEECCCCCCCCCCEEEEECC
Q ss_conf 47899999-999876417978998-972---89995--8-979999999999-977918986228888888703999628
Q gi|254780486|r 287 KSLLQLIN-ITDKIANKKIGFSSQ-SHI---QSIVI--G-DNKSCLNIAKNL-QKKGFDIRAIRPPTVPINTARLRISIT 357 (381)
Q Consensus 287 ~~l~~~~~-~~~~~~~~~~g~~~~-s~I---~~v~~--g-d~~~a~~~~~~L-~~~Gi~v~~i~~PtVp~~~~rlRi~v~ 357 (381)
.++....+ +++.+ .+.+.+.+ ++| +.+++ | ++++. +.| .+.-||.. +. -||++.
T Consensus 343 dRi~~mR~~L~d~L--~~~gs~~~W~hI~~QIGMF~fTgl~peQv----~~l~ke~~iYmT---------~d--GRiS~a 405 (427)
T KOG1411 343 DRIISMRQQLFDAL--EKEGSPGNWSHITKQIGMFCFTGLNPEQV----DWLTKEYHIYLT---------KD--GRISMA 405 (427)
T ss_pred HHHHHHHHHHHHHH--HCCCCCCCHHHHHHHHHEEEECCCCHHHH----HHHHHHHEEEEC---------CC--CEEEEC
T ss_conf 76655688876776--35798766799997620033247899999----998765236652---------58--637623
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q ss_conf 78999999999999999988
Q gi|254780486|r 358 LNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 358 a~~t~edi~~~~~~l~~v~~ 377 (381)
..+...+..+.++|..|.+
T Consensus 406 -G~ss~nV~yLa~aih~vtk 424 (427)
T KOG1411 406 -GLSSSNVPYLADAIHAVTK 424 (427)
T ss_pred -CCCCCCCCCCCHHHHHHHC
T ss_conf -4565677541110676743
No 359
>PRK09361 radB DNA repair and recombination protein RadB; Provisional
Probab=88.66 E-value=2 Score=22.82 Aligned_cols=66 Identities=18% Similarity=0.276 Sum_probs=38.4
Q ss_pred CCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCC---CCCCCCHHH-----------HHHHHHHHHHCCEE-EEECCC
Q ss_conf 640305688147899764310002478607971462---157661346-----------89999986313608-986131
Q gi|254780486|r 137 QAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESI---YSMDGDKAP-----------LDDLVKIANDYDGF-IVVDEA 201 (381)
Q Consensus 137 ~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv---~Sm~G~~ap-----------L~~i~~l~~~y~~~-LivDEa 201 (381)
++..+.-+++++++..+........+...+||+||+ |+++.+..+ +..+..+|+++++. +++..+
T Consensus 81 ~i~~~~~~~~~~~~~~i~~~~~~~~~~~~lvVIDSi~~~~~~e~~~~~~~~~~~~l~~~~~~L~~~a~~~~~~vvl~nqV 160 (224)
T PRK09361 81 NIIIFEPSSFEEQREAIQKAEKIAKENVGLIVLDSATSLYRLELDDNDNSKLNRELGKQISHLLSLARKHNIAVVITNQV 160 (224)
T ss_pred CCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEE
T ss_conf 61472479889999999999987505873899962301000001457658999999999999999999719869999668
Q ss_pred C
Q ss_conf 1
Q gi|254780486|r 202 H 202 (381)
Q Consensus 202 h 202 (381)
.
T Consensus 161 ~ 161 (224)
T PRK09361 161 Y 161 (224)
T ss_pred E
T ss_conf 8
No 360
>KOG3843 consensus
Probab=87.93 E-value=2.2 Score=22.53 Aligned_cols=279 Identities=14% Similarity=0.137 Sum_probs=120.9
Q ss_pred HHHHHCCCCCEEEECCCCHHHHHHHH-HHCCC---CCCCCH---HHH-CCHHHHHHHHHCCCCCEEECC-------CCHH
Q ss_conf 98401288851674166024565566-63168---971004---542-026775266640876403056-------8814
Q gi|254780486|r 83 EAADFFGFEKMLYFGSGYAANMAILS-TLPQA---TDLIVY---DKL-VHASIREGINSGKAQAIAIPH-------NNIN 147 (381)
Q Consensus 83 ~lA~~~g~e~al~~~sG~~An~~~i~-~l~~~---~d~ii~---D~~-~HaSi~~g~~ls~a~~~~f~H-------nD~~ 147 (381)
.|+-+.-...|+++|-.+.-.+++.. .+-.+ ...|++ |.. +-.||+.+ ..-+++.=.- .|++
T Consensus 68 ~l~glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~ksi~~a---gfepiiie~i~d~d~l~tdle 144 (432)
T KOG3843 68 HLAGLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCFKSIIHA---GFEPIIIENILDGDELITDLE 144 (432)
T ss_pred HHHHHHHHHCEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHC---CCCCEEEECCCCCHHHHHHHH
T ss_conf 88405654104688535663088999988613876617898850428788999862---777456313456307777699
Q ss_pred HHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH-----HHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCC
Q ss_conf 7899764310002478607971462157661346-----89999986313608986131122234777640110000134
Q gi|254780486|r 148 SFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP-----LDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERN 222 (381)
Q Consensus 148 ~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap-----L~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~ 222 (381)
..++++.+.. ++ .+.++- |...-++| |++|..+|-.|+..-+|..|+|+-- -+.=+-++....+..
T Consensus 145 av~~~iee~g---~d--cilci~---sttscfapr~pd~leaiaaica~~diphivnnayglqs-ee~i~~iaa~~~~gr 215 (432)
T KOG3843 145 AVEAIIEELG---ED--CILCIH---STTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQS-EECIHKIAAAAECGR 215 (432)
T ss_pred HHHHHHHHHC---CC--EEEEEE---ECCCCCCCCCCCHHHHHHHHHHCCCCHHHHCCCCCCCH-HHHHHHHHHHHHHCC
T ss_conf 9999999748---76--289995---05533578997519999999870586255323212354-999999998865051
Q ss_pred CCCCCCCCCCCCCC-EEEEE-EC-CCCCCCCCCCCCCCEECCCCCCCCH-HHHHH------HHHHHHHHCCCHHHHHHHH
Q ss_conf 65210013465653-02675-24-5100100001211000013577502-57898------8789886271022478999
Q gi|254780486|r 223 NVIVMHSCSKALGS-SGALV-GS-NKIIYDYLINYAKPFIYTTSPSPIL-AVVAC------EALKLIKRKPALHKSLLQL 292 (381)
Q Consensus 223 ~~iv~~TlsKa~g~-~GG~i-~~-~~~ii~~l~~~~~~~ifst~l~P~~-~aaa~------aal~~l~~~~~~~~~l~~~ 292 (381)
.+-++.+|-|-|-. .||.| ++ +...|+.+-+.-++- .+.+|.. ....+ +-.+++.++.+..-+++..
T Consensus 216 ida~vqsldknf~vpvggaiia~fk~n~iq~iak~ypgr---asa~ps~dllitll~~gqn~f~e~~~eqkemf~~l~~k 292 (432)
T KOG3843 216 IDAFVQSLDKNFMVPVGGAIIAAFKDNFIQEIAKMYPGR---ASASPSLDLLITLLSLGQNAFKELFGEQKEMFLKLRNK 292 (432)
T ss_pred HHHHHHHHHHCCEEECCHHHHHHHHHHHHHHHHHHCCCC---CCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 989999750264100344576686777999999868996---66685088999999822167888887799999999999
Q ss_pred HHHH-HHHHHCCCCCCCCCCEEEEE---ECCHHHH---HHHHHHHHHCCEEEEEECC------------------CCCCC
Q ss_conf 9999-98764179789989728999---5897999---9999999977918986228------------------88888
Q gi|254780486|r 293 INIT-DKIANKKIGFSSQSHIQSIV---IGDNKSC---LNIAKNLQKKGFDIRAIRP------------------PTVPI 347 (381)
Q Consensus 293 ~~~~-~~~~~~~~g~~~~s~I~~v~---~gd~~~a---~~~~~~L~~~Gi~v~~i~~------------------PtVp~ 347 (381)
+..+ +......+. ....+|-.-| .-|+.+- ..+..-|+.+||--.-+.+ -|...
T Consensus 293 i~~~ae~~~e~l~~-~p~n~is~amtl~ti~~~k~kavt~~gsilfak~isgarvv~~~q~kttieg~ef~~f~sht~e~ 371 (432)
T KOG3843 293 IIKFAEAIGECLLE-TPENEISLAMTLKTIDEAKDKAVTLFGSILFAKGISGARVVPLGQMKTTIEGCEFIGFGSHTNEQ 371 (432)
T ss_pred HHHHHHHHHHHHHC-CCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEEECEEEECCCCCCCCC
T ss_conf 99999986135422-89853535532513886776689998878875156674586535440024032776123356757
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 870399962878999999999999999988
Q gi|254780486|r 348 NTARLRISITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 348 ~~~rlRi~v~a~~t~edi~~~~~~l~~v~~ 377 (381)
..+.|-..-...+++.|+|.++..|++.++
T Consensus 372 ~~~yln~a~aigm~~hdld~~~~rl~~~~a 401 (432)
T KOG3843 372 HCAYLNAACAIGMKDHDLDEFFNRLDRCLA 401 (432)
T ss_pred CHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 526755777607717579999999999999
No 361
>TIGR01389 recQ ATP-dependent DNA helicase RecQ; InterPro: IPR006293 The ATP-dependent DNA helicase RecQ (3.6.1 from EC) is involved in genome maintenance . All homologues tested to date unwind paired DNA, translocating in a 3' to 5' direction and several have a preference for forked or 4-way DNA structures (e.g. Holliday junctions) or for G-quartet DNA. The yeast protein, Sgs1, is present in numerous foci that coincide with sites of de novo synthesis DNA, such as the replication fork, and protein levels peak during S-phase. A model has been proposed for Sgs1p action in the S-phase checkpoint response, both as a 'sensor' for damage during replication and a 'resolvase' for structures that arise at paused forks, such as the four-way 'chickenfoot' structure. The action of Sgs1p may serve to maintain the proper amount and integrity of ss DNA that is necessary for the binding of RPA (replication protein A, the eukaryotic ss DNA-binding protein)DNA pol complexes. Sgs1p would thus function by detecting (or resolving) aberrant DNA structures, and would thus contribute to the full activation of the DNA-dependent protein kinase, Mec1p and the effector kinase, Rad53p. Its ability to bind both the large subunit of RPA and the RecA-like protein Rad51p, place it in a unique position to resolve inappropriate fork structures that can occur when either the leading or lagging strand synthesis is stalled. Thus, RecQ helicases integrate checkpoint activation and checkpoint response. ; GO: 0004003 ATP-dependent DNA helicase activity, 0006310 DNA recombination, 0009432 SOS response.
Probab=87.29 E-value=2.4 Score=22.29 Aligned_cols=120 Identities=17% Similarity=0.146 Sum_probs=58.7
Q ss_pred HHHHHHHCCCCCEEEE-CCCCHHHHHH-HHHHCCCCCCCCHHHHCCHHH----HHHHHHCCCCCEEEC-CCCHHHHHHHH
Q ss_conf 9998401288851674-1660245655-666316897100454202677----526664087640305-68814789976
Q gi|254780486|r 81 EEEAADFFGFEKMLYF-GSGYAANMAI-LSTLPQATDLIVYDKLVHASI----REGINSGKAQAIAIP-HNNINSFAENI 153 (381)
Q Consensus 81 E~~lA~~~g~e~al~~-~sG~~An~~~-i~~l~~~~d~ii~D~~~HaSi----~~g~~ls~a~~~~f~-HnD~~~Le~~l 153 (381)
|.-|...+.-.++|.+ |+|=.=-++- ||+|..+|-.||+=.++ || ++..+..|.+--..- --+.+.-.+..
T Consensus 19 e~II~~vL~g~~~l~vmPTGGGKSlCYQ~PALll~Glt~VISPLI--sLMkDQVd~L~~~Gv~Aa~lNSt~s~~E~~~i~ 96 (607)
T TIGR01389 19 EEIIEHVLDGRDVLVVMPTGGGKSLCYQVPALLLKGLTVVISPLI--SLMKDQVDQLRAAGVAAAYLNSTLSAKEQQEIE 96 (607)
T ss_pred HHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEEECCHH--HHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHH
T ss_conf 899999847798589738998512777217887289879984236--314779999986070145203778888999999
Q ss_pred HHHHHCCCCCCCEEEE-CCCCCCCCCHHHHHHHHHHHHHC-CEEEEECCCCCCCCCCCCCC
Q ss_conf 4310002478607971-46215766134689999986313-60898613112223477764
Q gi|254780486|r 154 NKWRKSGGKGFPWIVV-ESIYSMDGDKAPLDDLVKIANDY-DGFIVVDEAHATGVCGPLGK 212 (381)
Q Consensus 154 ~~~~~~~~~~~~~vv~-egv~Sm~G~~apL~~i~~l~~~y-~~~LivDEah~~Gv~G~~G~ 212 (381)
+.... ++-+.+.|. |.+- .+...+.-++- =.++=|||||-+.=-|..=|
T Consensus 97 ~~~~~--G~~~LLYvAPERL~--------~~~Fl~~L~~~~i~L~AvDEAHCvSQWGHDFR 147 (607)
T TIGR01389 97 KALVN--GELKLLYVAPERLE--------QDYFLNMLKRLTIALLAVDEAHCVSQWGHDFR 147 (607)
T ss_pred HHHHC--CCEEEEEECCHHHH--------HHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC
T ss_conf 99841--98157751671321--------18999887319930899832502166888875
No 362
>TIGR02236 recomb_radA DNA repair and recombination protein RadA; InterPro: IPR011938 This family consists exclusively of archaeal RadA protein, a homolog of bacterial RecA, eukaryotic RAD51 (IPR011941 from INTERPRO), and archaeal RadB (IPR011939 from INTERPRO). This protein is involved in DNA repair and recombination. The member from Pyrococcus horikoshii contains an intein .; GO: 0003684 damaged DNA binding, 0005524 ATP binding, 0008094 DNA-dependent ATPase activity, 0006281 DNA repair, 0006310 DNA recombination.
Probab=84.91 E-value=3.2 Score=21.54 Aligned_cols=51 Identities=29% Similarity=0.462 Sum_probs=21.6
Q ss_pred HHHHHHHHHHHCCCCCCCEEEECCCCCC-------CCCHHH--------HHHHHHHHHHCCEEEEEC
Q ss_conf 7899764310002478607971462157-------661346--------899999863136089861
Q gi|254780486|r 148 SFAENINKWRKSGGKGFPWIVVESIYSM-------DGDKAP--------LDDLVKIANDYDGFIVVD 199 (381)
Q Consensus 148 ~Le~~l~~~~~~~~~~~~~vv~egv~Sm-------~G~~ap--------L~~i~~l~~~y~~~LivD 199 (381)
.+++++++.... .+.-.+|||||+-|. -|.+|. |..|..|++-||+.++|=
T Consensus 201 ~~~~li~e~~~~-~~pv~L~~VDSLtsHFRaEY~GRg~LA~RQQKLnkHlh~L~~ladlyn~aV~VT 266 (333)
T TIGR02236 201 KAKELIKELKNE-DKPVRLLIVDSLTSHFRAEYVGRGNLAERQQKLNKHLHDLLRLADLYNAAVVVT 266 (333)
T ss_pred HHHHHHHHCCCC-CCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEE
T ss_conf 999999730157-994689998121002236764502478898698788998865414021789985
No 363
>PRK04301 radA DNA repair and recombination protein RadA; Validated
Probab=84.42 E-value=3.3 Score=21.41 Aligned_cols=86 Identities=21% Similarity=0.239 Sum_probs=43.7
Q ss_pred CCCCCCHHHHCCHHH------HHHHHHC----CCCCEEECCCCHHHHHHHHHHHHHCC--CCCCCEEEECCC-------C
Q ss_conf 897100454202677------5266640----87640305688147899764310002--478607971462-------1
Q gi|254780486|r 113 ATDLIVYDKLVHASI------REGINSG----KAQAIAIPHNNINSFAENINKWRKSG--GKGFPWIVVESI-------Y 173 (381)
Q Consensus 113 ~~d~ii~D~~~HaSi------~~g~~ls----~a~~~~f~HnD~~~Le~~l~~~~~~~--~~~~~~vv~egv-------~ 173 (381)
.+.+|++|-+.-.+. ..+..+. --+++.++..|.++....+.....-- ...-.+||+|++ |
T Consensus 137 ~g~vvYIDTEgtF~peRi~qia~~~g~d~~~~L~nI~v~r~~~~~~q~~~~~~~~~~~~~~~~v~LvVvDSi~alfR~e~ 216 (318)
T PRK04301 137 EGKAVYIDTENTFRPERIEQMAEGLGLDPDEVLDNIHVARAYNSDHQMLLAEKAEELIKEGNNIKLVIVDSLTAHFRAEY 216 (318)
T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHCCCHHHHHHCEEEEECCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHEEECC
T ss_conf 86379995689869799999999849997898640268613998999999999999996278804999943423212104
Q ss_pred CCCCCHHH--------HHHHHHHHHHCCEEEEE
Q ss_conf 57661346--------89999986313608986
Q gi|254780486|r 174 SMDGDKAP--------LDDLVKIANDYDGFIVV 198 (381)
Q Consensus 174 Sm~G~~ap--------L~~i~~l~~~y~~~Liv 198 (381)
+-.|+++. +..|..|+++||+.+++
T Consensus 217 ~grg~l~~Rq~~L~~~l~~L~~lA~~~niaVvv 249 (318)
T PRK04301 217 VGRGNLAERQQKLNKHLHDLLRLADLYNAAVVV 249 (318)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 685309999999999999999999985957999
No 364
>pfam08423 Rad51 Rad51. Rad51 is a DNA repair and recombination protein and is a homologue of the bacterial ATPase RecA protein.
Probab=83.84 E-value=3.5 Score=21.25 Aligned_cols=62 Identities=18% Similarity=0.237 Sum_probs=37.4
Q ss_pred CCEEECCCCHHHHHHHHHHHHHCC-CCCCCEEEECCC-------CCCCCCHHH--------HHHHHHHHHHCCEEEEE
Q ss_conf 640305688147899764310002-478607971462-------157661346--------89999986313608986
Q gi|254780486|r 137 QAIAIPHNNINSFAENINKWRKSG-GKGFPWIVVESI-------YSMDGDKAP--------LDDLVKIANDYDGFIVV 198 (381)
Q Consensus 137 ~~~~f~HnD~~~Le~~l~~~~~~~-~~~~~~vv~egv-------~Sm~G~~ap--------L~~i~~l~~~y~~~Liv 198 (381)
++..++-.|.+++...+.+..... ...-.+||+|++ |+-.|+++. +..|..|+++||+.+++
T Consensus 111 ~I~v~r~~~~~~~~~~l~~~~~~~~~~~v~LvVvDSiaalfR~e~~g~~~l~~R~~~L~~~l~~L~~lA~~~~~aVvv 188 (261)
T pfam08423 111 NIAYARAYNTEHQMQLLLQAAAMMSESRFALLIVDSATALYRTDFSGRGELAERQQHLAKFLRSLQRLADEFGVAVVI 188 (261)
T ss_pred HCEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 331416899899999999999987317834999832400233300367528999999999999999999980958999
No 365
>cd01393 recA_like RecA is a bacterial enzyme which has roles in homologous recombination, DNA repair, and the induction of the SOS response. RecA couples ATP hydrolysis to DNA strand exchange. While prokaryotes have a single RecA protein, eukaryotes have multiple RecA homologs such as Rad51, DMC1 and Rad55/57. Archaea have the RecA-like homologs radA and radB.
Probab=83.71 E-value=3.6 Score=21.22 Aligned_cols=63 Identities=17% Similarity=0.230 Sum_probs=39.4
Q ss_pred CCCEEECCCCHHHHHHHHHHHHHCCC-CCCCEEEECCCCCC-------CCCHHH--------HHHHHHHHHHCCEEEEE
Q ss_conf 76403056881478997643100024-78607971462157-------661346--------89999986313608986
Q gi|254780486|r 136 AQAIAIPHNNINSFAENINKWRKSGG-KGFPWIVVESIYSM-------DGDKAP--------LDDLVKIANDYDGFIVV 198 (381)
Q Consensus 136 a~~~~f~HnD~~~Le~~l~~~~~~~~-~~~~~vv~egv~Sm-------~G~~ap--------L~~i~~l~~~y~~~Liv 198 (381)
.++..++.+|.+++.+.+++...... ....+||+|+|=.+ ++..+. +..+..++.+|++.+++
T Consensus 86 ~~i~~~~~~~~e~~~~~~~~l~~~~~~~~v~liViDSi~al~r~~~~~~~~~~~r~~~l~~~~~~L~~la~~~~~avv~ 164 (226)
T cd01393 86 DNIYVARPYNGEQQLEIVEELERIMSSGRVDLVVVDSVAALFRKEFIGRGMLAERARLLSQALRKLLRLADKFNVAVVF 164 (226)
T ss_pred HHEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCEECCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 3336843799999999999999875247842899932200111444276207899999999999999999984979999
No 366
>PRK11633 hypothetical protein; Provisional
Probab=83.34 E-value=3.7 Score=21.12 Aligned_cols=58 Identities=16% Similarity=0.291 Sum_probs=45.9
Q ss_pred ECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
Q ss_conf 589799999999999779189862288888887039996287899999999999999998
Q gi|254780486|r 317 IGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQII 376 (381)
Q Consensus 317 ~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~ 376 (381)
+.+...+.++.++|...|+-+... |+.+.+..+.|+.+....++++.+++...|+++.
T Consensus 149 Fs~~~nA~~L~~kLr~aGy~Ayt~--~~~~~~G~ltRV~VGP~~sk~~ae~~~~~Lkk~~ 206 (218)
T PRK11633 149 LKNADKVNEIVGKLRLSGYRVYTS--PSTPVQGKITRILVGPDASKDKLKGSLGELKQLS 206 (218)
T ss_pred CCCHHHHHHHHHHHHHCCCCCEEE--ECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHH
T ss_conf 479889999999999879844687--5137898379999799469999999999999986
No 367
>TIGR02198 rfaE_dom_I rfaE bifunctional protein, domain I; InterPro: IPR011913 RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in Escherichia coli, and separate proteins in some other genome. The longer, N-terminal domain I (this family) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (IPR011914 from INTERPRO) adds ADP to yield ADP-D-glycero-D-manno-heptose .; GO: 0016773 phosphotransferase activity alcohol group as acceptor, 0016779 nucleotidyltransferase activity, 0005975 carbohydrate metabolic process.
Probab=82.88 E-value=2.9 Score=21.80 Aligned_cols=52 Identities=15% Similarity=0.250 Sum_probs=39.3
Q ss_pred CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH--HHHHHHHHHHCCEEEEEC
Q ss_conf 8147899764310002478607971462157661346--899999863136089861
Q gi|254780486|r 145 NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP--LDDLVKIANDYDGFIVVD 199 (381)
Q Consensus 145 D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap--L~~i~~l~~~y~~~LivD 199 (381)
|.+..+++++.....-...-++|++| | --|.+.| .+++.++||++|..++||
T Consensus 128 ~~~~~~~L~~~~~~~l~~~d~VvLSD--Y-aKGvLt~~v~~~~I~~Ar~~~~pVlVD 181 (321)
T TIGR02198 128 NAEEEARLLAAIKEQLASADAVVLSD--Y-AKGVLTPSVVQEVIAAAREAGKPVLVD 181 (321)
T ss_pred CHHHHHHHHHHHHHHHCCCCEEEEEE--C-CCCCCCHHHHHHHHHHHHHCCCCEEEE
T ss_conf 97789999999999723287899986--6-876358578999999999668919980
No 368
>PTZ00035 Rad51; Provisional
Probab=81.01 E-value=4.5 Score=20.61 Aligned_cols=11 Identities=36% Similarity=0.697 Sum_probs=5.3
Q ss_pred HHHHHHHHHCC
Q ss_conf 99999863136
Q gi|254780486|r 183 DDLVKIANDYD 193 (381)
Q Consensus 183 ~~i~~l~~~y~ 193 (381)
.+|.+++++++
T Consensus 179 eRi~qIA~~~g 189 (350)
T PTZ00035 179 ERIVAIAKRYG 189 (350)
T ss_pred HHHHHHHHHCC
T ss_conf 99999998709
No 369
>TIGR00693 thiE thiamine-phosphate pyrophosphorylase; InterPro: IPR003733 Thiamine monophosphate synthase (TMP) (2.5.1.3 from EC) catalyzes the substitution of the pyrophosphate of 2-methyl-4-amino-5- hydroxymethylpyrimidine pyrophosphate by 4-methyl-5- (beta-hydroxyethyl)thiazole phosphate to yield thiamine phosphate in the thiamine biosynthesis pathway . TENI, a protein from Bacillus subtilis that regulates the production of several extracellular enzymes by reducing alkaline protease production belongs to this group .; GO: 0004789 thiamin-phosphate diphosphorylase activity, 0009228 thiamin biosynthetic process.
Probab=77.65 E-value=1.5 Score=23.66 Aligned_cols=20 Identities=15% Similarity=0.366 Sum_probs=18.0
Q ss_pred HHHHHHHHHHCCEEEEECCC
Q ss_conf 89999986313608986131
Q gi|254780486|r 182 LDDLVKIANDYDGFIVVDEA 201 (381)
Q Consensus 182 L~~i~~l~~~y~~~LivDEa 201 (381)
-+++++||++||+.|+|+|-
T Consensus 55 A~~l~~lc~~y~~~f~vND~ 74 (210)
T TIGR00693 55 AEKLRELCRKYGVPFIVNDR 74 (210)
T ss_pred HHHHHHHHHHCCCCEEECCH
T ss_conf 99999999870897688283
No 370
>cd01394 radB RadB. The archaeal protein radB shares similarity radA, the archaeal functional homologue to the bacterial RecA. The precise function of radB is unclear.
Probab=75.89 E-value=6.4 Score=19.63 Aligned_cols=65 Identities=15% Similarity=0.179 Sum_probs=37.2
Q ss_pred CCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC---C-----CCHHH-------HHHHHHHHHHCCEE-EEECC
Q ss_conf 640305688147899764310002478607971462157---6-----61346-------89999986313608-98613
Q gi|254780486|r 137 QAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSM---D-----GDKAP-------LDDLVKIANDYDGF-IVVDE 200 (381)
Q Consensus 137 ~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm---~-----G~~ap-------L~~i~~l~~~y~~~-LivDE 200 (381)
+...+...|.+++...+............+||+|+|-++ + |.... +..+..+++++++. +++-.
T Consensus 77 ~i~v~~~~~~~~~~~~i~~~~~~~~~~~~lvViDSi~tl~~~e~~~~~~~~~~~r~l~~~~~~L~~~Ak~~~~~vil~nq 156 (218)
T cd01394 77 SIIVFEPMDFNEQGRAIQETETFADEKVDLVVVDSATALYRLELGDDDTTIKNYRELAKQLTFLLWLARKHDVAVVITNQ 156 (218)
T ss_pred CCEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf 51462678768899999999976414772999914045545540689647999999999999999998766988999921
Q ss_pred C
Q ss_conf 1
Q gi|254780486|r 201 A 201 (381)
Q Consensus 201 a 201 (381)
+
T Consensus 157 V 157 (218)
T cd01394 157 V 157 (218)
T ss_pred E
T ss_conf 5
No 371
>TIGR00630 uvra excinuclease ABC, A subunit; InterPro: IPR004602 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain . The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyze ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarize the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site , , . The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis , , , , , . Proteins known to belong to this family are classified in several functional subfamilies depending on the substrate used (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). During the process of Escherichia coli nucleotide excision repair, DNA damage recognition and processing are achieved by the action of the uvrA, uvrB, and uvrC gene products . The UvrC protein contain 4 conserved regions: a central region which interact with UvrB (Uvr domain), a Helix hairpin Helix (HhH) domain important for 5 prime incision of damage DNA and the homology regions 1 and 2 of unknown function. UvrC homology region 2 is specific for UvrC proteins, whereas UvrC homology region 1 is also shared by few other nucleases.; GO: 0009381 excinuclease ABC activity, 0006289 nucleotide-excision repair, 0009380 excinuclease repair complex.
Probab=74.78 E-value=6.9 Score=19.46 Aligned_cols=51 Identities=27% Similarity=0.550 Sum_probs=28.6
Q ss_pred CCHHHHHHHHHHHHHC--CEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 8979999999999977--918986228888888703999628789999999999999999887387
Q gi|254780486|r 318 GDNKSCLNIAKNLQKK--GFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGNS 381 (381)
Q Consensus 318 gd~~~a~~~~~~L~~~--Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~s 381 (381)
|-+.+=.+++.+|.++ |==....-=||+ ..--+||.+|+++|.+.++.+||
T Consensus 863 GGEAQRiKLA~ELskr~TG~TLYiLDEPTT-------------GLHf~Di~kLL~VlqrLv~~GNT 915 (956)
T TIGR00630 863 GGEAQRIKLAKELSKRSTGRTLYILDEPTT-------------GLHFDDIKKLLEVLQRLVDKGNT 915 (956)
T ss_pred CHHHHHHHHHHHHCCCCCCCEEEEECCCCC-------------CCHHHHHHHHHHHHHHHHHCCCE
T ss_conf 158999999987078777875899628797-------------74189999999999999854996
No 372
>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed
Probab=73.42 E-value=5.9 Score=19.88 Aligned_cols=79 Identities=19% Similarity=0.308 Sum_probs=42.9
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCEEEEC-CCCCCCCCHHHHHHHHHHHHHCCEEE--------EECCCC--CCCCCCCCCC
Q ss_conf 881478997643100024786079714-62157661346899999863136089--------861311--2223477764
Q gi|254780486|r 144 NNINSFAENINKWRKSGGKGFPWIVVE-SIYSMDGDKAPLDDLVKIANDYDGFI--------VVDEAH--ATGVCGPLGK 212 (381)
Q Consensus 144 nD~~~Le~~l~~~~~~~~~~~~~vv~e-gv~Sm~G~~apL~~i~~l~~~y~~~L--------ivDEah--~~Gv~G~~G~ 212 (381)
-|.+++++.++....+ .+++|++. |+.+ .| --+++.+|+++.++-+ .+||.| .+|++|..|.
T Consensus 209 ~~~~~i~~a~~lL~~A---krPvIi~G~g~~~-~~---a~~~l~~lae~~~iPV~tt~~gkg~~~e~hpl~~G~~G~~g~ 281 (615)
T PRK07418 209 GNPRQINAALDLIEEA---ERPLLYVGGGAIS-AG---AHAELKELAERFQIPVTTTLMGKGAFDERHPLSVGMLGMHGT 281 (615)
T ss_pred CCHHHHHHHHHHHHHC---CCCEEEECCCCCC-HH---HHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999999999847---9978998987051-12---899999999975897023103556656678644555577788
Q ss_pred EEEEEH-HCCCCCCCCCC
Q ss_conf 011000-01346521001
Q gi|254780486|r 213 GLTHII-EERNNVIVMHS 229 (381)
Q Consensus 213 G~~~~~-~~~~~~iv~~T 229 (381)
...... ...|-+|.+|+
T Consensus 282 ~~a~~ai~~aDlvl~vG~ 299 (615)
T PRK07418 282 AYANFAVTECDLLIAVGA 299 (615)
T ss_pred HHHHHHHHCCCEEEEECC
T ss_conf 888876634886999657
No 373
>pfam04309 G3P_antiterm Glycerol-3-phosphate responsive antiterminator. Intracellular glycerol is usually converted to glycerol-3-phosphate in an ATP-requiring phosphorylation reaction catalysed by glycerol kinase (GlpK) glycerol-3-phosphate activates the antiterminator GlpP.
Probab=73.21 E-value=7.5 Score=19.22 Aligned_cols=49 Identities=16% Similarity=0.266 Sum_probs=34.5
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCC--EEEEECCCCCC
Q ss_conf 88147899764310002478607971462157661346899999863136--08986131122
Q gi|254780486|r 144 NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYD--GFIVVDEAHAT 204 (381)
Q Consensus 144 nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~--~~LivDEah~~ 204 (381)
.|+++|++.|+.- .. +|++ +.|++..|+++++.++++| +++.+|=..|+
T Consensus 6 r~~~~l~~al~s~------~~-~vfl-----l~g~I~~l~~~v~~~k~~gK~vfVHiDli~GL 56 (174)
T pfam04309 6 RNLKDLDRALESE------YQ-VVFL-----LTGHILNLKEIVKLLKQRGKTVFVHVDLVEGL 56 (174)
T ss_pred CCHHHHHHHHCCC------CC-EEEE-----ECCCHHHHHHHHHHHHHCCCEEEEEEECCCCC
T ss_conf 6788999998499------98-9999-----55808789999999998799899985216777
No 374
>TIGR02478 6PF1K_euk 6-phosphofructokinase; InterPro: IPR009161 Members of this family are eukaryotic (with one exception) ATP-dependent 6-phosphofructokinases (2.7.1.11 from EC) in which two tandem copies of the phosphofructokinase are found . Members are found, often including several isozymes, in animals and fungi and in the bacterium Propionibacterium acnes KPA171202 (a human skin commensal). Phosphofructokinase (PFK) catalyses the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate, which then enters the Embden-Meyerhof pathway. PFK is a key regulatory enzyme in glycolysis. For additional information please see , , .; GO: 0003872 6-phosphofructokinase activity, 0006096 glycolysis, 0005737 cytoplasm.
Probab=73.16 E-value=5.4 Score=20.11 Aligned_cols=78 Identities=19% Similarity=0.307 Sum_probs=47.3
Q ss_pred CCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCC-HHHHHHHHHHHHHCCCCCCCEEEECCCCCC
Q ss_conf 1660245655666316897100454202677526664087640305688-147899764310002478607971462157
Q gi|254780486|r 97 GSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHNN-INSFAENINKWRKSGGKGFPWIVVESIYSM 175 (381)
Q Consensus 97 ~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD-~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm 175 (381)
..||+|= +.+++.--|.||+-|.- + .-+| -|+|-..|++.|+...+..++||.||. +
T Consensus 196 HCGyLAL---~AaiAtgADyvFiPE~P-------------P----~~~~W~d~lc~~l~~~R~~GkR~~iViVAEGA--~ 253 (777)
T TIGR02478 196 HCGYLAL---MAAIATGADYVFIPERP-------------P----EEGDWEDQLCAKLKRNRKAGKRKNIVIVAEGA--I 253 (777)
T ss_pred CHHHHHH---HHHHHHHHCEEECCCCC-------------C----CCCCCHHHHHHHHHHHHHCCCCCEEEEEEECE--E
T ss_conf 4258999---99988622002247868-------------9----88876889989988877368964079984210--5
Q ss_pred CCCHHH-----HHHHHHHHHHCCEEE
Q ss_conf 661346-----899999863136089
Q gi|254780486|r 176 DGDKAP-----LDDLVKIANDYDGFI 196 (381)
Q Consensus 176 ~G~~ap-----L~~i~~l~~~y~~~L 196 (381)
|-+.-| +|++++=.=.++..+
T Consensus 254 D~~~~pItse~VK~vl~~~L~lDtRi 279 (777)
T TIGR02478 254 DRELNPITSEDVKDVLVERLGLDTRI 279 (777)
T ss_pred CCCCCCCCHHHHHHHHHHHCCCCEEE
T ss_conf 46777968898988864401840247
No 375
>PRK13845 putative glycerol-3-phosphate acyltransferase PlsX; Provisional
Probab=71.88 E-value=5.5 Score=20.04 Aligned_cols=30 Identities=27% Similarity=0.494 Sum_probs=18.6
Q ss_pred CCCCEEEECCCCCCCCCHHH---HHHHHHHHHHCCE
Q ss_conf 78607971462157661346---8999998631360
Q gi|254780486|r 162 KGFPWIVVESIYSMDGDKAP---LDDLVKIANDYDG 194 (381)
Q Consensus 162 ~~~~~vv~egv~Sm~G~~ap---L~~i~~l~~~y~~ 194 (381)
..|.||.+|| |.||.+| ++.-.+-.++++.
T Consensus 92 ~~r~wiAvD~---MGGD~aP~~i~~G~l~a~~~~~~ 124 (437)
T PRK13845 92 SDRIWVAVDG---MGGDYAPGPILEGCLQAISRLPL 124 (437)
T ss_pred CCEEEEEEEC---CCCCCCCHHHHHHHHHHHHHCCC
T ss_conf 6606999605---78877867788999999986793
No 376
>TIGR02483 PFK_mixed phosphofructokinase; InterPro: IPR012829 Members of this family that are characterised, save one, are phosphofructokinases dependent on pyrophosphate (2.7.1.90 from EC) rather than ATP (2.7.1.11 from EC). The exception is one of three phosphofructokinases from Streptomyces coelicolor. Family members are both bacterial and archaeal.; GO: 0005524 ATP binding, 0008443 phosphofructokinase activity, 0006002 fructose 6-phosphate metabolic process, 0006096 glycolysis.
Probab=70.12 E-value=7.1 Score=19.37 Aligned_cols=100 Identities=20% Similarity=0.291 Sum_probs=59.6
Q ss_pred CCCCCC-CCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEE-CCCCHHHH-HHHHHH
Q ss_conf 034465-667798899999999998637868872244368858999999998401288851674-16602456-556663
Q gi|254780486|r 34 FTSHDY-LALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEKMLYF-GSGYAANM-AILSTL 110 (381)
Q Consensus 34 f~s~dY-LGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~-~sG~~An~-~~i~~l 110 (381)
+...|| +||. .+ ++.+.||++| ..+ |-.- .+.+|++ -+|-+|-+ ++.+.|
T Consensus 144 l~~TD~TFGFD--TA-v~iATEAlDR-Lht----------TAeS-------------H~RVmVvEVMGRhAGWIAL~sG~ 196 (339)
T TIGR02483 144 LEATDYTFGFD--TA-VEIATEALDR-LHT----------TAES-------------HHRVMVVEVMGRHAGWIALHSGI 196 (339)
T ss_pred CCCCCCEECCC--CH-HHHHHHHHHH-HHH----------HHHH-------------HCCEEEEEECCCCHHHHHHHHHH
T ss_conf 53244022210--07-8999998752-400----------5873-------------19489999848545799988435
Q ss_pred CCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHH
Q ss_conf 1689710045420267752666408764030568814789976431000247860797146215766134
Q gi|254780486|r 111 PQATDLIVYDKLVHASIREGINSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKA 180 (381)
Q Consensus 111 ~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~a 180 (381)
++--|+|++-| ++| |++++-+++++......+-.++||.||++.-+|+..
T Consensus 197 aGGAd~ILIPE-----------------~P~---d~~~v~~~v~~r~~~G~~f~ivVVAEGa~p~~G~~~ 246 (339)
T TIGR02483 197 AGGADVILIPE-----------------IPF---DIDSVCEKVRERFARGKRFAIVVVAEGAKPKGGEMV 246 (339)
T ss_pred HCCCCEEEECC-----------------CCC---CHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEE
T ss_conf 20876789786-----------------048---889999999999872667525899726326787141
No 377
>PRK05409 hypothetical protein; Provisional
Probab=67.37 E-value=10 Score=18.43 Aligned_cols=145 Identities=16% Similarity=0.244 Sum_probs=70.8
Q ss_pred CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC-CCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHH
Q ss_conf 76898034465667798899999999998637868872244-36885899999999840128885167416602456556
Q gi|254780486|r 29 QDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRL-LCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAIL 107 (381)
Q Consensus 29 ~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~-~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i 107 (381)
-+.+-..+-||++-..-|. ...+++.++|++...|..+ +.|..++-.+.-++|+++...-...
T Consensus 29 id~~Ev~~EN~~~~gg~~~---~~L~~i~e~~Pv~~HGv~LSlGs~~~ld~~~L~~l~~l~~~~~~~------------- 92 (283)
T PRK05409 29 IDFFEVHPENYMGAGGKPL---AQLRAIRERYPLSLHGVSLSLGGAAPLDKDHLKRLKALADRYQPA------------- 92 (283)
T ss_pred CCEEEECCCCCCCCCCCHH---HHHHHHHHHCCEEEECCEEECCCCCCCCHHHHHHHHHHHHHHCCC-------------
T ss_conf 8879977422037799779---999999960985530121214788989999999999999985863-------------
Q ss_pred HHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCC--C-CC-CCCHHHHH
Q ss_conf 66316897100454202677526664087640305688147899764310002478607971462--1-57-66134689
Q gi|254780486|r 108 STLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESI--Y-SM-DGDKAPLD 183 (381)
Q Consensus 108 ~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv--~-Sm-~G~~apL~ 183 (381)
.++|.++= |-.+|..+..---.+|-.-.++.+.+.+++....-++ -+++|-+ | +. +.++....
T Consensus 93 ---------~~SeHL~~-s~~~g~~l~dLLPlP~T~eal~~v~~ri~~vQd~L~r---~lllEN~s~Y~~~~~~~m~E~e 159 (283)
T PRK05409 93 ---------LVSEHLAW-SSHGGHHLYDLLPLPYTEEALDHVAERIDQVQDILGR---PLLLENPSSYLAFPDSEMSEWE 159 (283)
T ss_pred ---------CEECCEEE-ECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC---CEEEECHHHHCCCCCCCCCHHH
T ss_conf ---------11041356-5069823043577677899999999999999998599---8587166875478878879999
Q ss_pred HHHHHHHHCCEEEEECCCC
Q ss_conf 9999863136089861311
Q gi|254780486|r 184 DLVKIANDYDGFIVVDEAH 202 (381)
Q Consensus 184 ~i~~l~~~y~~~LivDEah 202 (381)
=+.+|+++.||-|++|-..
T Consensus 160 Fl~~l~~~tgcgLLLDvnN 178 (283)
T PRK05409 160 FLNEVAERTGCGLLLDVNN 178 (283)
T ss_pred HHHHHHHHCCCEEEEEECC
T ss_conf 9999998639719997334
No 378
>COG0468 RecA RecA/RadA recombinase [DNA replication, recombination, and repair]
Probab=66.81 E-value=10 Score=18.36 Aligned_cols=112 Identities=19% Similarity=0.255 Sum_probs=61.2
Q ss_pred HHHHCCCCCEEEECCC--CHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHC---CCCCEEECCCCHHHHHHHHHHHHH
Q ss_conf 8401288851674166--02456556663168971004542026775266640---876403056881478997643100
Q gi|254780486|r 84 AADFFGFEKMLYFGSG--YAANMAILSTLPQATDLIVYDKLVHASIREGINSG---KAQAIAIPHNNINSFAENINKWRK 158 (381)
Q Consensus 84 lA~~~g~e~al~~~sG--~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls---~a~~~~f~HnD~~~Le~~l~~~~~ 158 (381)
+.+++|-| +|| ..|.+.+..+....+..+++|.+.--+....-.+. ..+...++-.+.++-.+.+....+
T Consensus 62 ItEiyG~~-----gsGKT~lal~~~~~aq~~g~~a~fIDtE~~l~p~r~~~l~~~~~d~l~v~~~~~~e~q~~i~~~~~~ 136 (279)
T COG0468 62 ITEIYGPE-----SSGKTTLALQLVANAQKPGGKAAFIDTEHALDPERAKQLGVDLLDNLLVSQPDTGEQQLEIAEKLAR 136 (279)
T ss_pred EEEEECCC-----CCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHH
T ss_conf 89984688-----7654668999988865379808999589998999999988754215368668977999999999987
Q ss_pred CCCCCCCEEEECCCCCC-------CCCHHH--------HHHHHHHHHHCCEEEEECC
Q ss_conf 02478607971462157-------661346--------8999998631360898613
Q gi|254780486|r 159 SGGKGFPWIVVESIYSM-------DGDKAP--------LDDLVKIANDYDGFIVVDE 200 (381)
Q Consensus 159 ~~~~~~~~vv~egv~Sm-------~G~~ap--------L~~i~~l~~~y~~~LivDE 200 (381)
...+...+||+|+|-++ |+.+.. |..+..++++||+.+++.-
T Consensus 137 ~~~~~i~LvVVDSvaa~~r~~~~~d~~~~~~~r~ls~~l~~L~~~a~~~~~~vi~~N 193 (279)
T COG0468 137 SGAEKIDLLVVDSVAALVRAEEIEDGHLGLRARLLSKALRKLTRLANKYNTAVIFTN 193 (279)
T ss_pred HCCCCCCEEEEECCCCCCHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 546887889982574346365548534899999999999999999997495899978
No 379
>TIGR00694 thiM hydroxyethylthiazole kinase; InterPro: IPR000417 Thiamine pyrophosphate (TPP), a required cofactor for many enzymes in the cell, is synthesised de novo in Salmonella typhimurium . Five kinase activities have been implicated in TPP synthesis, which involves joining a 4-methyl-5-(beta-hydroxyethyl)thiazole (THZ) moiety and a 4-amino-5- hydroxymethyl-2-methylpyrimidine (HMP) moiety , . THZ kinase (2.7.1.50 from EC) activity is involved in the salvage synthesis of TH-P from the thiazole: 2-methyl-4-amino-5-hydroxymethylpyrimidine diphosphate + 4-4-methyl-5-(2-phosphonooxyethyl)-thiazole = pyrophosphate + thiamin monophosphate Hydroxyethylthiazole kinase expression is regulated at the mRNA level by intracellular thiamin pyrophosphate .; GO: 0004417 hydroxyethylthiazole kinase activity, 0009228 thiamin biosynthetic process.
Probab=66.72 E-value=3 Score=21.69 Aligned_cols=119 Identities=19% Similarity=0.264 Sum_probs=70.3
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHH---HHHHHH---CCCCCCCCHHHHCC-HH-HHHH---HHH
Q ss_conf 7224436885899999999840128885167416602456---556663---16897100454202-67-7526---664
Q gi|254780486|r 65 GGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANM---AILSTL---PQATDLIVYDKLVH-AS-IREG---INS 133 (381)
Q Consensus 65 ~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~---~~i~~l---~~~~d~ii~D~~~H-aS-i~~g---~~l 133 (381)
++|+.++ +-++|+++|-.-++||+.|-|+..+- +.+.+. -..+-.|+.|.=-- |+ .+.- --|
T Consensus 31 GASP~Ms-------~~~eE~~e~akIa~ALviNIGTL~~~~~~a~~~A~~~ane~~~Pv~LDPVG~GAT~~R~~~~~elL 103 (282)
T TIGR00694 31 GASPIMS-------EAEEEVSELAKIADALVINIGTLDEKAIEAMIAAVKSANELGKPVVLDPVGVGATKLRTETALELL 103 (282)
T ss_pred CCCCHHH-------HHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHHHH
T ss_conf 2360122-------134479999752034376542148289999999999765438956887752574568899999998
Q ss_pred CCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC-CCHHHHHHHHHHHHHCCEEEEECC
Q ss_conf 0876403056881478997643100024786079714621576-613468999998631360898613
Q gi|254780486|r 134 GKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMD-GDKAPLDDLVKIANDYDGFIVVDE 200 (381)
Q Consensus 134 s~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~-G~~apL~~i~~l~~~y~~~LivDE 200 (381)
+.+++-..|-|- ..+-.++.... . .+=||=|.+ |.....+...++++||+++.++==
T Consensus 104 ~~g~~a~IkGN~-gEI~~L~G~~~---~------~~rGVDs~~~~~~~~~~~~~~~A~~~~~vvv~TG 161 (282)
T TIGR00694 104 SEGKVAAIKGNA-GEILSLAGEED---G------KMRGVDSGSQGAADAIAAAQEVARKYGTVVVVTG 161 (282)
T ss_pred HHCCCCEEECCH-HHHHHHHHHHC---C------CCCCEECCCCCCHHHHHHHHHHHHHCCCEEEEEC
T ss_conf 517820674577-99998846652---8------4011026642213589999998887094789998
No 380
>COG1105 FruK Fructose-1-phosphate kinase and related fructose-6-phosphate kinase (PfkB) [Carbohydrate transport and metabolism]
Probab=66.14 E-value=11 Score=18.28 Aligned_cols=52 Identities=12% Similarity=0.227 Sum_probs=33.2
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH------HHHHHHHHHHCCEEEEECCCC
Q ss_conf 88147899764310002478607971462157661346------899999863136089861311
Q gi|254780486|r 144 NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP------LDDLVKIANDYDGFIVVDEAH 202 (381)
Q Consensus 144 nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap------L~~i~~l~~~y~~~LivDEah 202 (381)
-+-++++..+++....-.+.- +|++ .|+++| ..++.++|+++|..+++|-..
T Consensus 111 is~~~~~~~l~~~~~~l~~~d-~Vvl------sGSlP~g~~~d~y~~li~~~~~~g~~vilD~Sg 168 (310)
T COG1105 111 ISEAELEQFLEQLKALLESDD-IVVL------SGSLPPGVPPDAYAELIRILRQQGAKVILDTSG 168 (310)
T ss_pred CCHHHHHHHHHHHHHHCCCCC-EEEE------ECCCCCCCCHHHHHHHHHHHHHCCCEEEEECCH
T ss_conf 899999999999997566488-9999------088999999799999999998659839997985
No 381
>PRK02615 thiamine-phosphate pyrophosphorylase; Provisional
Probab=64.30 E-value=5 Score=20.33 Aligned_cols=19 Identities=16% Similarity=0.543 Sum_probs=17.3
Q ss_pred HHHHHHHHHCCEEEEECCC
Q ss_conf 9999986313608986131
Q gi|254780486|r 183 DDLVKIANDYDGFIVVDEA 201 (381)
Q Consensus 183 ~~i~~l~~~y~~~LivDEa 201 (381)
+++.+||++||+.+||+|-
T Consensus 189 ~~l~~Lc~~y~a~fIINDr 207 (345)
T PRK02615 189 KQLKELCKRYGALFIVNDR 207 (345)
T ss_pred HHHHHHHHHHCCEEEEECC
T ss_conf 9999999995994898196
No 382
>CHL00099 ilvB acetohydroxyacid synthase large subunit
Probab=62.12 E-value=13 Score=17.81 Aligned_cols=80 Identities=19% Similarity=0.334 Sum_probs=43.8
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCEEEEC-CCCCCCCCHHHHHHHHHHHHHCCEEE--------EECCCC--CCCCCCCCC
Q ss_conf 6881478997643100024786079714-62157661346899999863136089--------861311--222347776
Q gi|254780486|r 143 HNNINSFAENINKWRKSGGKGFPWIVVE-SIYSMDGDKAPLDDLVKIANDYDGFI--------VVDEAH--ATGVCGPLG 211 (381)
Q Consensus 143 HnD~~~Le~~l~~~~~~~~~~~~~vv~e-gv~Sm~G~~apL~~i~~l~~~y~~~L--------ivDEah--~~Gv~G~~G 211 (381)
+.|.+.+++.++....+ .+++|++. |+.. .+ --+++.+|+++.++-+ ++||-| .+|++|..|
T Consensus 198 ~~~~~~i~~a~~~L~~A---krPvIi~G~g~~~-~~---a~~~l~~lae~lg~Pv~tt~~gkg~~~e~hpl~~G~~G~~g 270 (588)
T CHL00099 198 SPKSKQIEQAANLIKQS---SQPLLYVGGGAII-SG---AHDEIKELAELFKIPVTTTLMGKGIFDESHPLCLGMLGMHG 270 (588)
T ss_pred CCCHHHHHHHHHHHHHC---CCCEEEECCCCCH-HH---HHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 98999999999999716---9978997886332-13---99999999997599879723568777666842258777878
Q ss_pred CEEEEE-HHCCCCCCCCCC
Q ss_conf 401100-001346521001
Q gi|254780486|r 212 KGLTHI-IEERNNVIVMHS 229 (381)
Q Consensus 212 ~G~~~~-~~~~~~~iv~~T 229 (381)
.-.... ....|-+|.+||
T Consensus 271 ~~~a~~~l~~aDlvl~lG~ 289 (588)
T CHL00099 271 TAYANFAVSECDLLIALGA 289 (588)
T ss_pred CHHHHHHHHCCCHHEECCC
T ss_conf 9999877642411100488
No 383
>pfam10087 DUF2325 Uncharacterized protein conserved in bacteria (DUF2325). Members of this family of hypothetical bacterial proteins have no known function.
Probab=62.01 E-value=13 Score=17.80 Aligned_cols=85 Identities=11% Similarity=0.199 Sum_probs=49.3
Q ss_pred CCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCC--HHHHCCHHHHHH---HHHCCCCCEEECCC
Q ss_conf 3688589999999984012888516741660245655666316897100--454202677526---66408764030568
Q gi|254780486|r 70 LCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIV--YDKLVHASIREG---INSGKAQAIAIPHN 144 (381)
Q Consensus 70 ~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii--~D~~~HaSi~~g---~~ls~a~~~~f~Hn 144 (381)
+.|..+......+.+-+ .|.+ .+.+.+|..-+..-|+.+.++-|+|| .|-.+|.+++.- ++-.+.+++..+-.
T Consensus 5 IGG~~~~~~~~~~~~~~-~G~~-~~~h~~g~~~~~~~l~~~i~~aDlVI~~td~vsH~~~~~vK~~akk~~~p~v~~~s~ 82 (96)
T pfam10087 5 VGGRDDRLGHYRKLLEK-YGGE-FIVHDGGREKKKKKIPALLKKADLVIVFTDCVSHDAMWRVKEEAKKRGIPVVFSRSR 82 (96)
T ss_pred ECCCHHHHHHHHHHHHH-CCCE-EEEECCCCCCHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEECCC
T ss_conf 95855678999999998-3998-999658987335567750589888999717668799999999999849978997687
Q ss_pred CHHHHHHHHHHH
Q ss_conf 814789976431
Q gi|254780486|r 145 NINSFAENINKW 156 (381)
Q Consensus 145 D~~~Le~~l~~~ 156 (381)
.+.+|++.|.+.
T Consensus 83 s~~~l~~~l~~~ 94 (96)
T pfam10087 83 SLSALERALARL 94 (96)
T ss_pred CHHHHHHHHHHH
T ss_conf 499999999996
No 384
>pfam04015 DUF362 Domain of unknown function (DUF362). Sometimes present in iron-sulphur proteins.
Probab=61.37 E-value=12 Score=18.06 Aligned_cols=35 Identities=3% Similarity=-0.043 Sum_probs=24.2
Q ss_pred CCCCEEE---E--CCCCCCCCCCCCHHHHHHHHHHHHHHCC
Q ss_conf 2897689---8--0344656677988999999999986378
Q gi|254780486|r 26 LRRQDIW---D--FTSHDYLALSSSTLLREKILSSLDSKIP 61 (381)
Q Consensus 26 ~~~~~~l---~--f~s~dYLGl~~~p~v~~a~~~a~~~~~g 61 (381)
..|++++ | +.+.-.-+-.+||++++++.+-+. ..|
T Consensus 33 kpG~kVLIKPNll~~~~pe~~vtThP~vV~Avv~~~~-e~G 72 (262)
T pfam04015 33 PPGDRVLLKPNFLKANSPERPCITHPEVVSAVVDVLK-EQG 72 (262)
T ss_pred CCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHH-HCC
T ss_conf 9999899858868888987677588899999999999-779
No 385
>PRK05428 HPr kinase/phosphorylase; Provisional
Probab=61.23 E-value=13 Score=17.71 Aligned_cols=45 Identities=16% Similarity=0.111 Sum_probs=20.0
Q ss_pred CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEE
Q ss_conf 814789976431000247860797146215766134689999986313608986
Q gi|254780486|r 145 NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVV 198 (381)
Q Consensus 145 D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~Liv 198 (381)
+.+..++.+++.-... ...+|++.+. .|-+++.++|++|++.|+.
T Consensus 67 ~~e~~~~~~~~l~~~~--~P~iIvt~~~-------~~~~~l~~~a~~~~ipll~ 111 (308)
T PRK05428 67 SEEERKERLKKLFSFE--PPCIIVTRGL-------EPPEELLEAAKEAGIPLLR 111 (308)
T ss_pred CHHHHHHHHHHHHCCC--CCEEEEECCC-------CCCHHHHHHHHHHCCCEEE
T ss_conf 9999999999985769--9789997999-------9999999999984995898
No 386
>TIGR02881 spore_V_K stage V sporulation protein K; InterPro: IPR014232 Proteins in this entry include the stage V sporulation protein K (SpoVK), a close homologue of the Rubisco expression protein CbbX (IPR000470 from INTERPRO), and are members of an ATPase family associated with various cellular activities. These proteins are strictly limited to bacterial endospore-forming species, but are not found universally among members of this group; they are missing from the Clostridium species..
Probab=61.08 E-value=2.2 Score=22.53 Aligned_cols=27 Identities=22% Similarity=0.411 Sum_probs=19.6
Q ss_pred CCHHHHHHHHHHH-HHCCEEEEECCCCCCC
Q ss_conf 6134689999986-3136089861311222
Q gi|254780486|r 177 GDKAPLDDLVKIA-NDYDGFIVVDEAHATG 205 (381)
Q Consensus 177 G~~apL~~i~~l~-~~y~~~LivDEah~~G 205 (381)
|-.| .+.+++- +.-|.+|+||||+|+-
T Consensus 91 GHTA--qkTRe~~kkA~GGvLFiDEAYSLa 118 (261)
T TIGR02881 91 GHTA--QKTREVIKKALGGVLFIDEAYSLA 118 (261)
T ss_pred CCHH--HHHHHHHHHHCCCCHHHHHHHHHH
T ss_conf 3004--899999998638800557777761
No 387
>cd01173 pyridoxal_pyridoxamine_kinase Pyridoxal kinase plays a key role in the synthesis of the active coenzyme pyridoxal-5'-phosphate (PLP), by catalyzing the phosphorylation of the precursor vitamin B6 in the presence of Zn2+ and ATP. Mammals are unable to synthesize PLP de novo and require its precursors in the form of vitamin B6 (pyridoxal, pyridoxine, and pyridoxamine) from their diet. Pyridoxal kinase encoding genes are also found in many other species including yeast and bacteria.
Probab=59.23 E-value=14 Score=17.50 Aligned_cols=102 Identities=14% Similarity=0.121 Sum_probs=49.1
Q ss_pred ECCCCHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCC---CCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCC
Q ss_conf 4166024565566631689710045420267752666408---7640305688147899764310002478607971462
Q gi|254780486|r 96 FGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGK---AQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESI 172 (381)
Q Consensus 96 ~~sG~~An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~---a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv 172 (381)
..+|+..|.++++.|..-|--+.. +- -+.+|. .....-.+-+.+.++..++.+..... ++-.|+|
T Consensus 9 v~~G~vg~~aai~~l~~~G~~v~~-------lp-Tv~lSnhtg~~~~~g~~~~~~~l~~~l~~~~~~~~----~~~~daI 76 (254)
T cd01173 9 VVHGYVGNSAAVFPLQRLGWDVDA-------LP-TVQFSNHTGYGTWTGFVLSAEELEDLLEGLEALGL----LLEYDAV 76 (254)
T ss_pred CCCCCCHHHHHHHHHHHCCCEEEE-------EE-EEECCCCCCCCCCCCEECCHHHHHHHHHHHHHCCC----CCCCCEE
T ss_conf 677851279999999987985578-------75-58723379999855044889999999999997498----6669999
Q ss_pred CC-CCCCHHHHHHHHHHHHHC-----CEEEEECCCCCCCCCCCCCCEE
Q ss_conf 15-766134689999986313-----6089861311222347776401
Q gi|254780486|r 173 YS-MDGDKAPLDDLVKIANDY-----DGFIVVDEAHATGVCGPLGKGL 214 (381)
Q Consensus 173 ~S-m~G~~apL~~i~~l~~~y-----~~~LivDEah~~Gv~G~~G~G~ 214 (381)
++ |-|+..-++.+.+..+++ +..+++|= |+|++|+++
T Consensus 77 ~tGyl~s~~~i~~v~~~i~~~k~~~~~~~~v~DP-----VmgD~g~~y 119 (254)
T cd01173 77 LTGYLGSAEQVEAVAEIVKRLKEKNPNLLYVCDP-----VMGDNGKLY 119 (254)
T ss_pred EECCCCCHHHHHHHHHHHHHHHHCCCCCCEEECC-----EEECCCCCC
T ss_conf 9911699999999999999986248987389651-----585299884
No 388
>TIGR01959 nuoF_fam NADH-quinone oxidoreductase, F subunit; InterPro: IPR011537 This entry describes the F chain of complexes that resemble NADH-quinone oxidoreductases. The electron acceptor is a quinone, ubiquinone, in mitochondria and most bacteria, including Escherichia coli, where the recommended gene symbol is nuoF. This family does not have any members in chloroplast or cyanobacteria, where the quinone may be plastoquinone and NADH may be replaced by NADPH, nor in Methanosarcina, where NADH is replaced by F420H2. ; GO: 0010181 FMN binding, 0016651 oxidoreductase activity acting on NADH or NADPH, 0051287 NAD binding, 0051539 4 iron 4 sulfur cluster binding, 0006118 electron transport.
Probab=58.77 E-value=2.5 Score=22.22 Aligned_cols=42 Identities=29% Similarity=0.530 Sum_probs=25.1
Q ss_pred ECCCCCCCCCCCC--CCEEEEEHHCCCCCCCCCCCCCCCCCEEEEEECCC-CCCCCCC
Q ss_conf 6131122234777--64011000013465210013465653026752451-0010000
Q gi|254780486|r 198 VDEAHATGVCGPL--GKGLTHIIEERNNVIVMHSCSKALGSSGALVGSNK-IIYDYLI 252 (381)
Q Consensus 198 vDEah~~Gv~G~~--G~G~~~~~~~~~~~iv~~TlsKa~g~~GG~i~~~~-~ii~~l~ 252 (381)
||||++.|.+|++ |.|+ |-+|.+.+ | .|+||+|-. .++|-|.
T Consensus 141 i~EA~~~G~LGkNIlGsGF-------Df~l~~H~-----G-AGAYICGEETALleSLE 185 (420)
T TIGR01959 141 IAEAYAAGLLGKNILGSGF-------DFELFVHR-----G-AGAYICGEETALLESLE 185 (420)
T ss_pred HHHHHHCCCCCCCCCCCCC-------CEEEEEEC-----C-CCCEECHHHHHHHHHCC
T ss_conf 9999975982003378862-------05763433-----8-88505047897453105
No 389
>TIGR02482 PFKA_ATP 6-phosphofructokinase; InterPro: IPR012828 6-phosphofructokinase (2.7.1.11 from EC) catalyses the addition of phosphate from ATP to fructose 6-phosphate to give fructose 1,6-bisphosphate. This represents a key control step in glycolysis. This entry contains bacterial ATP-dependent 6-phosphofructokinases, which lack a beta-hairpin loop present in IPR012829 from INTERPRO family members. IPR012829 from INTERPRO contains members that are ATP-dependent as well as members that are pyrophosphate-dependent. IPR011183 from INTERPRO represents the pyrophosphate-dependent phosphofructokinase, diphosphate--fructose-6-phosphate 1-phosphotransferase (2.7.1.90 from EC).; GO: 0003872 6-phosphofructokinase activity, 0005524 ATP binding, 0006002 fructose 6-phosphate metabolic process, 0006096 glycolysis.
Probab=58.22 E-value=11 Score=18.19 Aligned_cols=39 Identities=31% Similarity=0.336 Sum_probs=21.7
Q ss_pred HCCCCCEEE--CCCCHHHHHHHHHHHHHCCCCCCCEEEECC
Q ss_conf 408764030--568814789976431000247860797146
Q gi|254780486|r 133 SGKAQAIAI--PHNNINSFAENINKWRKSGGKGFPWIVVES 171 (381)
Q Consensus 133 ls~a~~~~f--~HnD~~~Le~~l~~~~~~~~~~~~~vv~eg 171 (381)
.++|..... .++|++.|.+.+++...+..+..++|++|+
T Consensus 182 AtGAE~i~~pE~~~~~~~l~~~~k~~~~~~k~~SiI~~ae~ 222 (302)
T TIGR02482 182 ATGAEIIIIPEFDLDIEELIERIKEQREAGKKNSIIIVAEG 222 (302)
T ss_pred HHHHHEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEE
T ss_conf 64010211588888989999999999860899618999951
No 390
>cd07373 2A5CPDO_A The alpha subunit of the Class III extradiol dioxygenase, 2-amino-5-chlorophenol 1,6-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 2-amino-5-chlorophenol. 2-amino-5-chlorophenol 1,6-dioxygenase (2A5CPDO) catalyzes the oxidization and subsequent ring-opening of 2-amino-5-chlorophenol, which is an intermediate during p-chloronitrobenzene degradation. This enzyme is a member of the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. The active enzyme is probably a heterotetramer, composed of two alpha and two beta subunits. The alpha and beta subunits share significant sequence similarity and may have evolved by gene duplication. This model describes the alpha subunit, which does not contain a potential metal binding site and may not possess catalytic activity.
Probab=58.15 E-value=15 Score=17.38 Aligned_cols=31 Identities=10% Similarity=0.036 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCHHHHHH
Q ss_conf 89999999984012888516741660245655
Q gi|254780486|r 75 NQHLELEEEAADFFGFEKMLYFGSGYAANMAI 106 (381)
Q Consensus 75 ~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~ 106 (381)
..|+++-++|++.- .+--+++++-|.++.+-
T Consensus 29 ~ay~~~~~~i~~~~-pD~ivV~stHW~~~~g~ 59 (271)
T cd07373 29 AATRQAGKALAASR-PDVVLVYSTQWFAVLDQ 59 (271)
T ss_pred HHHHHHHHHHHHCC-CCEEEEECCCCCCCCCE
T ss_conf 99999999998539-99899987876123256
No 391
>pfam02110 HK Hydroxyethylthiazole kinase family.
Probab=57.65 E-value=15 Score=17.33 Aligned_cols=119 Identities=19% Similarity=0.250 Sum_probs=60.8
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHH--HHH----HHHCCCCCCCCHHHHCCH-H-HHHH--HHH-
Q ss_conf 7224436885899999999840128885167416602456--556----663168971004542026-7-7526--664-
Q gi|254780486|r 65 GGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANM--AIL----STLPQATDLIVYDKLVHA-S-IREG--INS- 133 (381)
Q Consensus 65 ~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~--~~i----~~l~~~~d~ii~D~~~Ha-S-i~~g--~~l- 133 (381)
++|+.++ +-.++..+|....+|++.|-|+.... -.+ ..-.+.+-.|+.|.-.-. | .+.. .++
T Consensus 31 GasPiMa-------~~~~E~~e~~~~a~al~iNiGTl~~~~~~~m~~A~~~A~~~~~PvVLDPVg~Gas~~R~~~~~~lL 103 (246)
T pfam02110 31 GASPIMS-------EAEEEVAELAKIAGALVINIGTLDNYRIEAMKAAVKSANELGRPVVLDPVGVGATKFRTETILELL 103 (246)
T ss_pred CCCHHHC-------CCHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHH
T ss_conf 9970205-------997899999986280699778899899999999999999729988964644674088999999999
Q ss_pred CCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCC
Q ss_conf 08764030568814789976431000247860797146215766134689999986313608986131
Q gi|254780486|r 134 GKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEA 201 (381)
Q Consensus 134 s~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEa 201 (381)
...+.-..|-| ...+..+.... --.-||-|.++....++...+++++|++.+++--.
T Consensus 104 ~~~~~tvIrGN-~sEI~aL~g~~----------~~~kGVDs~~~~~~~~~~a~~lA~~~~~vvvvTG~ 160 (246)
T pfam02110 104 NSGGVAAIRGN-AGEILALAGEE----------GLMRGVDSGEGATAAIRAAQRVARKYGTVVVVTGE 160 (246)
T ss_pred HHCCCCEEECC-HHHHHHHHCCC----------CCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECC
T ss_conf 72899899546-99999985776----------88879268984678999999999981989998689
No 392
>PRK13508 tagatose-6-phosphate kinase; Provisional
Probab=56.89 E-value=16 Score=17.25 Aligned_cols=48 Identities=15% Similarity=0.209 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH------HHHHHHHHHHCCEEEEECCC
Q ss_conf 47899764310002478607971462157661346------89999986313608986131
Q gi|254780486|r 147 NSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP------LDDLVKIANDYDGFIVVDEA 201 (381)
Q Consensus 147 ~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap------L~~i~~l~~~y~~~LivDEa 201 (381)
+++++.+++......+.. +|++- |.++| ..++.+++++.|+.+++|=+
T Consensus 111 ~~~~~ll~~~~~~~~~~d-~vvis------GSlP~g~~~~~y~~li~~~~~~g~~vilD~s 164 (309)
T PRK13508 111 QEADGFLHHFKQLLEKVE-VVAIS------GSLPAGLPQDYYAQLIELANNKGKKVVLDCS 164 (309)
T ss_pred HHHHHHHHHHHHHHCCCC-EEEEE------CCCCCCCCHHHHHHHHHHHHHCCCEEEEECC
T ss_conf 999999999998705599-99996------8889999859999999999855998999897
No 393
>PRK10689 transcription-repair coupling factor; Provisional
Probab=56.85 E-value=16 Score=17.25 Aligned_cols=18 Identities=0% Similarity=-0.047 Sum_probs=10.2
Q ss_pred CCCCCCHHHHHHHHHHHH
Q ss_conf 287899999999999999
Q gi|254780486|r 356 ITLNVDEPTIVKLFDILP 373 (381)
Q Consensus 356 v~a~~t~edi~~~~~~l~ 373 (381)
++...|..+..+.++.++
T Consensus 683 LsRf~s~ke~~~i~~~l~ 700 (1148)
T PRK10689 683 LSRFRSAKEQTQILAEAA 700 (1148)
T ss_pred ECCCCCHHHHHHHHHHHH
T ss_conf 038888999999999986
No 394
>cd04913 ACT_AKii-LysC-BS-like_1 ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168 and related proteins. This CD includes the N-terminal of the two ACT domains of the lysine-sensitive aspartokinase isoenzyme AKII of Bacillus subtilis (BS) strain 168, and the lysine plus threonine-sensitive aspartokinase of Corynebacterium glutamicum, and related sequences. In B. subtilis 168, the regulation of the diaminopimelate (Dap)-lysine biosynthetic pathway involves dual control by Dap and lysine, effected through separate Dap- and lysine-sensitive aspartokinase isoenzymes. The B. subtilis 168 AKII is induced by methionine and repressed and inhibited by lysine. Although Corynebacterium glutamicum is known to contain a single aspartokinase, both the succinylase and dehydrogenase variant pathways of DAP-lysine synthesis operate simultaneously in this organism. In corynebacteria and other various Gram-positive bacteria, the DAP-lysine pathway is fee
Probab=56.66 E-value=16 Score=17.23 Aligned_cols=57 Identities=12% Similarity=0.169 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf 7999999999997791898622888888870399962878999999999999999988738
Q gi|254780486|r 320 NKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGN 380 (381)
Q Consensus 320 ~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~ 380 (381)
|..+..+...|-++||.|-.|.--..-.+..-|=|++ .++|++++.+++++..+|++
T Consensus 13 PG~aa~iF~~La~~~InVDmIvQ~~~~~~~~disFTv----~~~dl~~a~~vl~~~~~~l~ 69 (75)
T cd04913 13 PGVAAKIFGALAEANINVDMIVQNVSRDGTTDISFTV----PKSDLKKALAVLEKLKKELG 69 (75)
T ss_pred CCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEEEE----CHHHHHHHHHHHHHHHHHCC
T ss_conf 9669999999998598479998616789945899990----49999999999999998649
No 395
>PRK06546 pyruvate dehydrogenase; Provisional
Probab=56.20 E-value=16 Score=17.18 Aligned_cols=77 Identities=12% Similarity=0.234 Sum_probs=40.4
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCEEEE-CCCCCCCCCHHHHHHHHHHHHHCCEEE--------EECCCC--CCCCCCCCCC
Q ss_conf 88147899764310002478607971-462157661346899999863136089--------861311--2223477764
Q gi|254780486|r 144 NNINSFAENINKWRKSGGKGFPWIVV-ESIYSMDGDKAPLDDLVKIANDYDGFI--------VVDEAH--ATGVCGPLGK 212 (381)
Q Consensus 144 nD~~~Le~~l~~~~~~~~~~~~~vv~-egv~Sm~G~~apL~~i~~l~~~y~~~L--------ivDEah--~~Gv~G~~G~ 212 (381)
-|.+++++..+..... .+++|++ -|+ .+. -+++.+|+++.++-+ +++|-| .+|+.|..|.
T Consensus 186 p~~~~i~~a~~~L~~A---krPvii~G~G~---~~a---~~el~~lae~l~~PV~tt~~gkg~i~~dhpl~~G~~G~~g~ 256 (578)
T PRK06546 186 PDPEEVRALADAINDA---KKVTLFCGAGV---AGA---HAEVLELAEKIKAPIGHALRGKDWIQYDNPFDVGMSGLLGY 256 (578)
T ss_pred CCHHHHHHHHHHHHHC---CCCEEEECCCC---CCH---HHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999999998507---79889937774---127---99999999987988898623346677888300565767686
Q ss_pred EEE-EEHHCCCCCCCCCC
Q ss_conf 011-00001346521001
Q gi|254780486|r 213 GLT-HIIEERNNVIVMHS 229 (381)
Q Consensus 213 G~~-~~~~~~~~~iv~~T 229 (381)
... +.....|-+|++||
T Consensus 257 ~~a~~~l~~aDlvl~iGt 274 (578)
T PRK06546 257 GAAAEAMNDADLLILLGT 274 (578)
T ss_pred HHHHHHHCCCCEEEEECC
T ss_conf 899986515787999816
No 396
>cd07370 HPCD The Class III extradiol dioxygenase, homoprotocatechuate 2,3-dioxygenase, catalyzes the key ring cleavage step in the metabolism of homoprotocatechuate. 3,4-dihydroxyphenylacetate (homoprotocatechuate) 2,3-dioxygenase (HPCD) catalyzes the key ring cleavage step in the metabolism of homoprotocatechuate (hpca), a central intermediate in the bacterial degradation of aromatic compounds. The enzyme incorporates both atoms of molecular oxygen into hpca, resulting in aromatic ring-opening to yield alpha-hydroxy-delta-carboxymethyl cis-muconic semialdehyde. HPCD is a member of the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon.
Probab=55.71 E-value=16 Score=17.13 Aligned_cols=28 Identities=14% Similarity=0.273 Sum_probs=15.0
Q ss_pred HHHHHHHHHHHHHCCCCCEEEE-CCCCHHHH
Q ss_conf 8999999998401288851674-16602456
Q gi|254780486|r 75 NQHLELEEEAADFFGFEKMLYF-GSGYAANM 104 (381)
Q Consensus 75 ~~~~~lE~~lA~~~g~e~al~~-~sG~~An~ 104 (381)
+-|+++-+++++. + ++++++ ++=|..+.
T Consensus 32 ~g~~e~~rr~~~~-~-pDtvVV~spHw~~~~ 60 (280)
T cd07370 32 DGLKEIGRRAREL-G-VDTIVVFDTHWLVNA 60 (280)
T ss_pred HHHHHHHHHHHHC-C-CCEEEEECCCCCCCC
T ss_conf 9999999999873-9-998999858865225
No 397
>PRK09355 hydroxyethylthiazole kinase; Validated
Probab=55.63 E-value=16 Score=17.12 Aligned_cols=152 Identities=18% Similarity=0.204 Sum_probs=74.7
Q ss_pred HHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHC
Q ss_conf 99999999975983999289768980344656677988999999999986378688722443688589999999984012
Q gi|254780486|r 9 YEERLQKIKSKGRHRQLLRRQDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFF 88 (381)
Q Consensus 9 ~~~~l~~~~~~g~~~~~~~~~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~~G~~~~~~~lE~~lA~~~ 88 (381)
+.+.|+++|++.....-+ .|+.+ .+-....+. ..++|+.++ +-.++..+|.
T Consensus 2 ~~~~l~~ir~~~PLVh~I-----TN~Vt------------~n~~AN~lL-----A~GasPiMa-------~~~~E~~e~~ 52 (262)
T PRK09355 2 IAEALEKVREKNPLVHNI-----TNYVV------------MNFTANGLL-----ALGASPAMA-------HAPEEAEEMA 52 (262)
T ss_pred HHHHHHHHHHHCCEEEEE-----CCHHH------------HHHHHHHHH-----HCCCCCHHC-------CCHHHHHHHH
T ss_conf 699999998609927970-----04203------------745799999-----839970314-------9867899999
Q ss_pred CCCCEEEECCCCHHH--HHHH----HHHCCCCCCCCHHHHCC-HHH-HHH--HHH-CCCCCEEECCCCHHHHHHHHHHHH
Q ss_conf 888516741660245--6556----66316897100454202-677-526--664-087640305688147899764310
Q gi|254780486|r 89 GFEKMLYFGSGYAAN--MAIL----STLPQATDLIVYDKLVH-ASI-REG--INS-GKAQAIAIPHNNINSFAENINKWR 157 (381)
Q Consensus 89 g~e~al~~~sG~~An--~~~i----~~l~~~~d~ii~D~~~H-aSi-~~g--~~l-s~a~~~~f~HnD~~~Le~~l~~~~ 157 (381)
...+|++.|-|+..- .-.+ ..-.+.+-.|+.|.--- +|- +.. -++ ...+.-..|-| ...+..+....
T Consensus 53 ~~a~al~iNiGTl~~~~~~~m~~a~~~A~~~~~PvVLDPVGvGas~~R~~~~~~LL~~~~~tvIrGN-~sEI~aL~g~~- 130 (262)
T PRK09355 53 KIASALVINIGTLTEERIEAMLAAGKIANEAGKPVVLDPVGVGATSYRTEFALELLEEVKPAVIRGN-ASEIAALAGEA- 130 (262)
T ss_pred HHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCEEECC-HHHHHHHHCCC-
T ss_conf 7537248866889989999999999999973998897474468637899999999973898799546-99999985887-
Q ss_pred HCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECC
Q ss_conf 0024786079714621576613468999998631360898613
Q gi|254780486|r 158 KSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDE 200 (381)
Q Consensus 158 ~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDE 200 (381)
--.-||-|.+++-...+...+++++|++.+++--
T Consensus 131 ---------~~~kGVDs~~~~~~~~~~a~~lA~~~~~vvvvTG 164 (262)
T PRK09355 131 ---------GETKGVDSTDGSADAVEIAKALAKKYGTVVVVTG 164 (262)
T ss_pred ---------CCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEEC
T ss_conf ---------8883937898525699999999998398899966
No 398
>PRK08611 pyruvate oxidase; Provisional
Probab=55.51 E-value=16 Score=17.11 Aligned_cols=77 Identities=18% Similarity=0.282 Sum_probs=37.3
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCEEEEC-CCCCCCCCHHHHHHHHHHHHHCCEEEE--------ECCCC--CCCCCCCCCC
Q ss_conf 881478997643100024786079714-621576613468999998631360898--------61311--2223477764
Q gi|254780486|r 144 NNINSFAENINKWRKSGGKGFPWIVVE-SIYSMDGDKAPLDDLVKIANDYDGFIV--------VDEAH--ATGVCGPLGK 212 (381)
Q Consensus 144 nD~~~Le~~l~~~~~~~~~~~~~vv~e-gv~Sm~G~~apL~~i~~l~~~y~~~Li--------vDEah--~~Gv~G~~G~ 212 (381)
-|.+++++.++...++ .+++|++- |+ -.--+++.+|+++.++-++ +||-| .+|.+|..|.
T Consensus 188 p~~~~i~~a~~~L~~A---krPvIi~G~G~------~~a~~~l~~Lae~l~~PV~tt~~gkg~~pedhpl~~G~~G~~g~ 258 (576)
T PRK08611 188 PKKKDIKKAAKLINKA---KKPVILAGVGA------KHAKDELLEFAEKAKIPIIHTLPAKGIIPDDHPYSLGNLGKIGT 258 (576)
T ss_pred CCHHHHHHHHHHHHHC---CCCEEECCHHH------HHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 9999999999999856---69877637568------89999999999997989895145578668767300365434575
Q ss_pred EEE-EEHHCCCCCCCCCC
Q ss_conf 011-00001346521001
Q gi|254780486|r 213 GLT-HIIEERNNVIVMHS 229 (381)
Q Consensus 213 G~~-~~~~~~~~~iv~~T 229 (381)
-.. +.+...|-+|.+||
T Consensus 259 ~~a~~~l~~aDlvl~lGt 276 (576)
T PRK08611 259 KPAYEAMQEADLLIMVGT 276 (576)
T ss_pred HHHHHHHHCCCEEEEECC
T ss_conf 899998623787999799
No 399
>TIGR02403 trehalose_treC alpha,alpha-phosphotrehalase; InterPro: IPR012769 Trehalose is a glucose disaccharide that serves in many biological systems as a compatible solute for protection against hyperosmotic and thermal stress. This family describes trehalose-6-phosphate hydrolase, product of the treC (or treA) gene, which is often found together with a trehalose uptake transporter and a trehalose operon repressor.; GO: 0008788 alphaalpha-phosphotrehalase activity, 0005993 trehalose catabolic process, 0005737 cytoplasm.
Probab=54.97 E-value=14 Score=17.44 Aligned_cols=64 Identities=20% Similarity=0.231 Sum_probs=41.7
Q ss_pred CCHHHHHHHHHHHHHHC---CC---------------------CC-C-CCCCCCCCCHHHHHHHHHHHHHCC-CCCEEEE
Q ss_conf 98899999999998637---86---------------------88-7-224436885899999999840128-8851674
Q gi|254780486|r 44 SSTLLREKILSSLDSKI---PI---------------------GS-G-GSRLLCGNYNQHLELEEEAADFFG-FEKMLYF 96 (381)
Q Consensus 44 ~~p~v~~a~~~a~~~~~---g~---------------------~~-~-~sr~~~G~~~~~~~lE~~lA~~~g-~e~al~~ 96 (381)
.+|+|++++.+-+ +-| |+ .+ + |=|+.+=...+|+-|-+-=.+.|+ ..+-+++
T Consensus 170 ~Np~VR~~~~~v~-~FW~dKGV~GFRlDVINLIsK~~~f~dd~~~~~DGR~fYTDGP~VH~YL~Em~~~vF~~~~~~~TV 248 (555)
T TIGR02403 170 ENPEVREELKDVV-NFWRDKGVDGFRLDVINLISKDQFFEDDEIGEGDGRRFYTDGPRVHEYLQEMNQEVFGQDNDIVTV 248 (555)
T ss_pred CCHHHHHHHHHHH-HHHHHCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEE
T ss_conf 7888999999999-999866987135427740347632566677888682221586048899999987605657873686
Q ss_pred ---CCCCHHHHHHHH
Q ss_conf ---166024565566
Q gi|254780486|r 97 ---GSGYAANMAILS 108 (381)
Q Consensus 97 ---~sG~~An~~~i~ 108 (381)
||.+..|...-+
T Consensus 249 GEmSSTt~~~c~~Y~ 263 (555)
T TIGR02403 249 GEMSSTTIENCIRYS 263 (555)
T ss_pred CCCCHHHHHHHHHHC
T ss_conf 144076799998605
No 400
>TIGR00580 mfd transcription-repair coupling factor; InterPro: IPR004576 All proteins in this family for which functions are known are DNA-dependent ATPases that function in the process of transcription-coupled DNA repair in which the repair of the transcribed strand of actively transcribed genes is repaired at a higher rate than the repair of non-transcribed regions of the genome and than the non-transcribed strand of the same gene. A lesion in the template strand blocks the RNA polymerase complex (RNAP). The RNAP-DNA-RNA complex is specifically recognised by TcrF, which releases RNAP and the truncated transcript. The TcrF may replace RNAP at the lesion site and then recruit the UvrA/B/C repair system.; GO: 0003684 damaged DNA binding, 0005524 ATP binding, 0006281 DNA repair.
Probab=54.91 E-value=14 Score=17.44 Aligned_cols=100 Identities=17% Similarity=0.286 Sum_probs=54.7
Q ss_pred EEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH--HHHHHH--HHHHCCE-----------------EEE
Q ss_conf 0305688147899764310002478607971462157661346--899999--8631360-----------------898
Q gi|254780486|r 139 IAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP--LDDLVK--IANDYDG-----------------FIV 197 (381)
Q Consensus 139 ~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap--L~~i~~--l~~~y~~-----------------~Li 197 (381)
+.|=||+++++++.=.+.+.--|..++.|. -|-+.+ |.++.. ..++|++ .+|
T Consensus 724 vFyv~Nrie~i~~~~~~l~~LVP~arIaia-------HGqM~e~eLE~~m~~F~~~~~~vLvcTTIIE~GIDIPnANTiI 796 (997)
T TIGR00580 724 VFYVHNRIESIEKLKTQLRELVPEARIAIA-------HGQMTENELEEVMLEFYKGEFDVLVCTTIIESGIDIPNANTII 796 (997)
T ss_pred EEEEECCCCCHHHHHHHHHHCCCCEEEEEE-------ECCCCHHHHHHHHHHHHCCCCCEEEEHHHHHCCCCHHHHHHHH
T ss_conf 899808813578999999850843267888-------3356845689999986268433013221465056410012686
Q ss_pred ECCCCCCCC------CCCCCCE----EEEEHHCCCCCC------CCCCCCC--CCCCEEEEEECCCCC
Q ss_conf 613112223------4777640----110000134652------1001346--565302675245100
Q gi|254780486|r 198 VDEAHATGV------CGPLGKG----LTHIIEERNNVI------VMHSCSK--ALGSSGALVGSNKII 247 (381)
Q Consensus 198 vDEah~~Gv------~G~~G~G----~~~~~~~~~~~i------v~~TlsK--a~g~~GG~i~~~~~i 247 (381)
||.|.-||. -||=||| +|.++-..+.-+ ....+.+ -+| +||-.+.+++
T Consensus 797 i~~AD~FGLaQLYQLRGRVGRs~~~AYAYlL~~~~~~Lt~~A~~RL~ai~~f~eLG--aGf~iA~hDl 862 (997)
T TIGR00580 797 IDRADKFGLAQLYQLRGRVGRSKKKAYAYLLYPHQKALTEDALKRLEAIQEFSELG--AGFKIALHDL 862 (997)
T ss_pred HHHHCCCCHHHHHHCCCEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHCCCC--CHHHHHHHCC
T ss_conf 87521147034745363120587126898334774001458999999997301135--2167886311
No 401
>PRK10933 trehalose-6-phosphate hydrolase; Provisional
Probab=54.67 E-value=17 Score=17.03 Aligned_cols=24 Identities=17% Similarity=0.216 Sum_probs=15.0
Q ss_pred CCHHHHHHHHHHHHHHC-CCCCCCCC
Q ss_conf 98899999999998637-86887224
Q gi|254780486|r 44 SSTLLREKILSSLDSKI-PIGSGGSR 68 (381)
Q Consensus 44 ~~p~v~~a~~~a~~~~~-g~~~~~sr 68 (381)
.+|+|+++..+.+. .| -.|.-|=|
T Consensus 174 ~Np~Vr~~l~~i~~-fWld~GVDGfR 198 (551)
T PRK10933 174 ENPAVRAELKKVCE-FWADRGVDGLR 198 (551)
T ss_pred CCHHHHHHHHHHHH-HHHHCCCCEEE
T ss_conf 99899999999999-99864988899
No 402
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein; InterPro: IPR012693 ABC transporters belong to the ATP-Binding Cassette (ABC) superfamily, which uses the hydrolysis of ATP to energize diverse biological systems. ABC transporters are minimally constituted of two conserved regions: a highly conserved ATP binding cassette (ABC) and a less conserved transmembrane domain (TMD). These regions can be found on the same protein or on two different ones. Most ABC transporters function as a dimer and therefore are constituted of four domains, two ABC modules and two TMDs. ABC transporters are involved in the export or import of a wide variety of substrates ranging from small ions to macromolecules. The major function of ABC import systems is to provide essential nutrients to bacteria. They are found only in prokaryotes and their four constitutive domains are usually encoded by independent polypeptides (two ABC proteins and two TMD proteins). Prokaryotic importers require additional extracytoplasmic binding proteins (one or more per systems) for function. In contrast, export systems are involved in the extrusion of noxious substances, the export of extracellular toxins and the targeting of membrane components. They are found in all living organisms and in general the TMD is fused to the ABC module in a variety of combinations. Some eukaryotic exporters encode the four domains on the same polypeptide chain . The ABC module (approximately two hundred amino acid residues) is known to bind and hydrolyze ATP, thereby coupling transport to ATP hydrolysis in a large number of biological processes. The cassette is duplicated in several subfamilies. Its primary sequence is highly conserved, displaying a typical phosphate-binding loop: Walker A, and a magnesium binding site: Walker B. Besides these two regions, three other conserved motifs are present in the ABC cassette: the switch region which contains a histidine loop, postulated to polarize the attaching water molecule for hydrolysis, the signature conserved motif (LSGGQ) specific to the ABC transporter, and the Q-motif (between Walker A and the signature), which interacts with the gamma phosphate through a water bond. The Walker A, Walker B, Q-loop and switch region form the nucleotide binding site , , . The 3D structure of a monomeric ABC module adopts a stubby L-shape with two distinct arms. ArmI (mainly beta-strand) contains Walker A and Walker B. The important residues for ATP hydrolysis and/or binding are located in the P-loop. The ATP-binding pocket is located at the extremity of armI. The perpendicular armII contains mostly the alpha helical subdomain with the signature motif. It only seems to be required for structural integrity of the ABC module. ArmII is in direct contact with the TMD. The hinge between armI and armII contains both the histidine loop and the Q-loop, making contact with the gamma phosphate of the ATP molecule. ATP hydrolysis leads to a conformational change that could facilitate ADP release. In the dimer the two ABC cassettes contact each other through hydrophobic interactions at the antiparallel beta-sheet of armI by a two-fold axis , , , , , . Proteins known to belong to this family are classified in several functional subfamilies depending on the substrate used (for further information see http://www.tcdb.org/tcdb/index.php?tc=3.A.1). Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.; GO: 0005524 ATP binding, 0015416 phosphonate transmembrane-transporting ATPase activity, 0015716 phosphonate transport, 0016020 membrane.
Probab=54.45 E-value=17 Score=17.00 Aligned_cols=19 Identities=21% Similarity=0.468 Sum_probs=7.8
Q ss_pred CHHHHHHHHHHHH----HCCEEE
Q ss_conf 9799999999999----779189
Q gi|254780486|r 319 DNKSCLNIAKNLQ----KKGFDI 337 (381)
Q Consensus 319 d~~~a~~~~~~L~----~~Gi~v 337 (381)
||..+..+.+.|+ |.||-|
T Consensus 187 DP~~s~~VMd~lk~In~e~GIT~ 209 (253)
T TIGR02315 187 DPKTSKQVMDYLKRINKEDGITV 209 (253)
T ss_pred CHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 75678999999999887769779
No 403
>TIGR02017 hutG_amidohyd N-formylglutamate amidohydrolase; InterPro: IPR010247 In some species, histidine is converted to via urocanate and then formimino-L-glutamate to glutamate in four steps, where the fourth step is conversion of N-formimino-L-glutamate to L-glutamate and formamide. In others, that pathway from formimino-L-glutamate may differ, with the next enzyme being formiminoglutamate hydrolase (HutF) yielding N-formyl-L-glutamate. This entry represents the enzyme N-formylglutamate deformylase, also called N-formylglutamate amidohydrolase, which then produces glutamate..
Probab=54.16 E-value=17 Score=16.98 Aligned_cols=22 Identities=14% Similarity=0.256 Sum_probs=17.7
Q ss_pred HHHHHHHHHCCEEEEECCCCCCC
Q ss_conf 99999863136089861311222
Q gi|254780486|r 183 DDLVKIANDYDGFIVVDEAHATG 205 (381)
Q Consensus 183 ~~i~~l~~~y~~~LivDEah~~G 205 (381)
.||..|...|+..++.| |||+=
T Consensus 129 ~Ei~RLra~hg~~vLyD-aHSIR 150 (269)
T TIGR02017 129 AEIERLRAQHGYAVLYD-AHSIR 150 (269)
T ss_pred HHHHHHHHHCCCEEEEC-CCCCC
T ss_conf 99999884358079871-64200
No 404
>KOG2848 consensus
Probab=53.71 E-value=16 Score=17.14 Aligned_cols=58 Identities=14% Similarity=0.138 Sum_probs=29.7
Q ss_pred CCCCCCEEEEEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEE---CCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 89989728999589799999999999779189862288888887039996---2878999999999999999988
Q gi|254780486|r 306 FSSQSHIQSIVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRIS---ITLNVDEPTIVKLFDILPQIIS 377 (381)
Q Consensus 306 ~~~~s~I~~v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~---v~a~~t~edi~~~~~~l~~v~~ 377 (381)
...+-||+||.+-+-..-..-..+-+..| ..++|+- +|...|++||+.+.+..+....
T Consensus 192 vqaqVPIVPvv~ssy~~f~~~~~k~f~sG--------------~v~V~vL~pI~TeglT~ddv~~L~~~~R~~M~ 252 (276)
T KOG2848 192 VQAQVPIVPVVFSSYGDFYSTKEKVFNSG--------------NVIVRVLPPIPTEGLTKDDVDVLSDECRSAML 252 (276)
T ss_pred HHCCCCEEEEEEECCCCCCCCCCCEEECC--------------EEEEEECCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 13389879899805652516843224156--------------08999828978667781007899999999999
No 405
>cd01121 Sms Sms (bacterial radA) DNA repair protein. This protein is not related to archael radA any more than is to other RecA-like NTPases. Sms has a role in recombination and recombinational repair and is responsible for the stabilization or processing of branched DNA molecules.
Probab=53.33 E-value=18 Score=16.89 Aligned_cols=116 Identities=16% Similarity=0.242 Sum_probs=62.1
Q ss_pred CCCCCCCCCCCCCC-----HHHHHHHHHHHHHCCCCCEEEECCCCHH-HHHHHHHHCCCCCCCCHHHHCCHHHHHHHH--
Q ss_conf 86887224436885-----8999999998401288851674166024-565566631689710045420267752666--
Q gi|254780486|r 61 PIGSGGSRLLCGNY-----NQHLELEEEAADFFGFEKMLYFGSGYAA-NMAILSTLPQATDLIVYDKLVHASIREGIN-- 132 (381)
Q Consensus 61 g~~~~~sr~~~G~~-----~~~~~lE~~lA~~~g~e~al~~~sG~~A-n~~~i~~l~~~~d~ii~D~~~HaSi~~g~~-- 132 (381)
|+-+++.-+++|.+ .+..++-..+|+ ...-.+|-||=.. .|-.+ .+-|
T Consensus 78 GiVpGSvvLlgGePGIGKSTLLLQia~~la~---~~~~vLYvSGEES~~QIk~---------------------RA~RLg 133 (372)
T cd01121 78 GLVPGSVILIGGDPGIGKSTLLLQVAARLAK---RGGKVLYVSGEESPEQIKL---------------------RADRLG 133 (372)
T ss_pred CCCCCEEEEEECCCCCCHHHHHHHHHHHHHH---CCCCEEEEECHHHHHHHHH---------------------HHHHHC
T ss_conf 7306717998259988688999999999986---3993899824567899998---------------------999858
Q ss_pred HCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC--------CCCHHHHH----HHHHHHHHCCEEEEECC
Q ss_conf 4087640305688147899764310002478607971462157--------66134689----99998631360898613
Q gi|254780486|r 133 SGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSM--------DGDKAPLD----DLVKIANDYDGFIVVDE 200 (381)
Q Consensus 133 ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm--------~G~~apL~----~i~~l~~~y~~~LivDE 200 (381)
....+...+..+|+++..+.+.+.+ | .++|+|+|.-| -|.+.-++ ++.++||+++..+++=
T Consensus 134 ~~~~~l~l~set~le~Il~~i~~~k---P---~~lIIDSIQT~~~~~~~s~pGsvsQVReca~~L~~~AK~~~i~~~lV- 206 (372)
T cd01121 134 ISTENLYLLAETNLEDILASIEELK---P---DLVIIDSIQTVYSSELTSAPGSVSQVRECTAELMRFAKERNIPIFIV- 206 (372)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHC---C---CEEEEECHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE-
T ss_conf 7887727884356999999999719---9---88999562202037767799878999999999999998619739999-
Q ss_pred CCCCCCCCCCC
Q ss_conf 11222347776
Q gi|254780486|r 201 AHATGVCGPLG 211 (381)
Q Consensus 201 ah~~Gv~G~~G 211 (381)
|-+-+.|
T Consensus 207 ----GHVTK~G 213 (372)
T cd01121 207 ----GHVTKEG 213 (372)
T ss_pred ----EEECCCC
T ss_conf ----8762688
No 406
>KOG1123 consensus
Probab=53.13 E-value=6.8 Score=19.47 Aligned_cols=110 Identities=15% Similarity=0.229 Sum_probs=49.7
Q ss_pred HHHHHHHHCCCC----CEEEECCCCHHHHHHHHHHC--CCCCCCCHHHHCCHHH--HHHH--HHCC---CCCEEECCCCH
Q ss_conf 999984012888----51674166024565566631--6897100454202677--5266--6408---76403056881
Q gi|254780486|r 80 LEEEAADFFGFE----KMLYFGSGYAANMAILSTLP--QATDLIVYDKLVHASI--REGI--NSGK---AQAIAIPHNNI 146 (381)
Q Consensus 80 lE~~lA~~~g~e----~al~~~sG~~An~~~i~~l~--~~~d~ii~D~~~HaSi--~~g~--~ls~---a~~~~f~HnD~ 146 (381)
-|+.|.++||-- ..++.|.|..-.+--+.+.+ ++.++|++-..+ |+ |..- ..|. .++-+|-
T Consensus 307 QEksL~KMFGNgRARSGiIVLPCGAGKtLVGvTAa~tikK~clvLcts~V--SVeQWkqQfk~wsti~d~~i~rFT---- 380 (776)
T KOG1123 307 QEKSLSKMFGNGRARSGIIVLPCGAGKTLVGVTAACTIKKSCLVLCTSAV--SVEQWKQQFKQWSTIQDDQICRFT---- 380 (776)
T ss_pred HHHHHHHHHCCCCCCCCEEEEECCCCCCEEEEEEEEEECCCEEEEECCCC--CHHHHHHHHHHHHCCCCCCEEEEE----
T ss_conf 78789997378854476189856998742545555455142799955756--699999998745016855457720----
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHH----HHHHHHH-HHHHCCEEEEECCCCCC
Q ss_conf 4789976431000247860797146215766134----6899999-86313608986131122
Q gi|254780486|r 147 NSFAENINKWRKSGGKGFPWIVVESIYSMDGDKA----PLDDLVK-IANDYDGFIVVDEAHAT 204 (381)
Q Consensus 147 ~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~a----pL~~i~~-l~~~y~~~LivDEah~~ 204 (381)
..+....+.+..+|| +-|||-+... .-.++.+ |..+-=.+|++||+|-+
T Consensus 381 -------sd~Ke~~~~~~gvvv--sTYsMva~t~kRS~eaek~m~~l~~~EWGllllDEVHvv 434 (776)
T KOG1123 381 -------SDAKERFPSGAGVVV--TTYSMVAYTGKRSHEAEKIMDFLRGREWGLLLLDEVHVV 434 (776)
T ss_pred -------CCCCCCCCCCCCEEE--EEEEHHHHCCCCCHHHHHHHHHHHCCEEEEEEEEHHCCC
T ss_conf -------244545789885799--873131105664277999999984371016884211112
No 407
>TIGR00603 rad25 DNA repair helicase rad25; InterPro: IPR001161 Xeroderma pigmentosum (XP) is a human autosomal recessive disease, characterised by a high incidence of sunlight-induced skin cancer. People's skin cells with this condition are hypersensitive to ultraviolet light, due to defects in the incision step of DNA excision repair. There are a minimum of seven genetic complementation groups involved in this pathway: XP-A to XP-G. XP-G is one of the most rare and phenotypically heterogeneous of XP, showing anything from slight to extreme dysfunction in DNA excision repair , . XP-G can be corrected by a 133 Kd nuclear protein, XPGC . XPGC is an acidic protein that confers normal UV resistance in expressing cells . It is a magnesium-dependent, single-strand DNA endonuclease that makes structure-specific endonucleolytic incisions in a DNA substrate containing a duplex region and single-stranded arms , . XPGC cleaves one strand of the duplex at the border with the single-stranded region . XPG belongs to a family of proteins that includes RAD2 from Saccharomyces cerevisiae (Baker's yeast) and rad13 from Schizosaccharomyces pombe (Fission yeast), which are single-stranded DNA endonucleases , ; mouse and human FEN-1, a structure-specific endonuclease; RAD2 from fission yeast and RAD27 from budding yeast; fission yeast exo1, a 5'-3' double-stranded DNA exonuclease that may act in a pathway that corrects mismatched base pairs; yeast DHS1, and yeast DIN7. Sequence alignment of this family of proteins reveals that similarities are largely confined to two regions. The first is located at the N-terminal extremity (N-region) and corresponds to the first 95 to 105 amino acids. The second region is internal (I-region) and found towards the C-terminus; it spans about 140 residues and contains a highly conserved core of 27 amino acids that includes a conserved pentapeptide (E-A-[DE]-A-[QS]). It is possible that the conserved acidic residues are involved in the catalytic mechanism of DNA excision repair in XPG. The amino acids linking the N- and I-regions are not conserved. This entry represents XP group B (XP-B) give rise to both XP and Cockayne syndrome . The DNA/RNA helicase domain IPR001650 from INTERPRO is also present in this group of proteins.; GO: 0003677 DNA binding, 0004003 ATP-dependent DNA helicase activity, 0005524 ATP binding, 0006289 nucleotide-excision repair, 0005634 nucleus.
Probab=52.88 E-value=18 Score=16.85 Aligned_cols=103 Identities=20% Similarity=0.315 Sum_probs=58.9
Q ss_pred HHHHHH-HHCC----CCCEEEECCCCHHHHHHHHHHC--CCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCHHHHHHH
Q ss_conf 999984-0128----8851674166024565566631--68971004542026775266640876403056881478997
Q gi|254780486|r 80 LEEEAA-DFFG----FEKMLYFGSGYAANMAILSTLP--QATDLIVYDKLVHASIREGINSGKAQAIAIPHNNINSFAEN 152 (381)
Q Consensus 80 lE~~lA-~~~g----~e~al~~~sG~~An~~~i~~l~--~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD~~~Le~~ 152 (381)
=|+.|. ++|| .--.++.|+|..=-+.-|+|-| +|..+|++-.-+ |+ +.+...
T Consensus 274 QEKSLrsKMFGNGRARSGiIVLPCGAGKsLVGvTAACTvkKs~lVLctS~V--SV-------------------~QW~~Q 332 (756)
T TIGR00603 274 QEKSLRSKMFGNGRARSGIIVLPCGAGKSLVGVTAACTVKKSVLVLCTSAV--SV-------------------EQWKQQ 332 (756)
T ss_pred HHHHCCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHEEEEEEEEEEECCCH--HH-------------------HHHHHH
T ss_conf 111044456678611055177677888311225442023100789726710--08-------------------899988
Q ss_pred HHHHHHCC--------------CCCCCEEEECCCCCCCCCHH-----HHHHHHHHHHHCCEEEEECCCCCC
Q ss_conf 64310002--------------47860797146215766134-----689999986313608986131122
Q gi|254780486|r 153 INKWRKSG--------------GKGFPWIVVESIYSMDGDKA-----PLDDLVKIANDYDGFIVVDEAHAT 204 (381)
Q Consensus 153 l~~~~~~~--------------~~~~~~vv~egv~Sm~G~~a-----pL~~i~~l~~~y~~~LivDEah~~ 204 (381)
.+.+-... +.+..-|++ +-|||=|--. -.+-+..|..+==+++++||+|-+
T Consensus 333 Fk~WSti~d~~IcrFTSD~Ke~~~~~~gv~v-sTYsMva~t~kRS~es~k~m~~l~~rEWGl~~LDEVHvv 402 (756)
T TIGR00603 333 FKLWSTIDDSQICRFTSDAKEKFHGEAGVVV-STYSMVAHTGKRSYESEKVMEWLTNREWGLILLDEVHVV 402 (756)
T ss_pred HHHCCCCCCCCCCCCCCCCCCCCCCCCCEEE-ECCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCC
T ss_conf 7522688735511025213576266533588-733000247543188999999970687317986110103
No 408
>cd00363 PFK Phosphofructokinase, a key regulatory enzyme in glycolysis, catalyzes the phosphorylation of fructose-6-phosphate to fructose-1,6-biphosphate. The members belong to PFK family that includes ATP- and pyrophosphate (PPi)- dependent phosphofructokinases. Some members evolved by gene duplication and thus have a large C-terminal/N-terminal extension comprising a second PFK domain. Generally, ATP-PFKs are allosteric homotetramers, and PPi-PFKs are dimeric and nonallosteric except for plant PPi-PFKs which are allosteric heterotetramers.
Probab=52.52 E-value=18 Score=16.81 Aligned_cols=14 Identities=14% Similarity=0.064 Sum_probs=7.5
Q ss_pred CEEEECCCCHHHHH
Q ss_conf 51674166024565
Q gi|254780486|r 92 KMLYFGSGYAANMA 105 (381)
Q Consensus 92 ~al~~~sG~~An~~ 105 (381)
++|++-.|-.+..+
T Consensus 94 d~Li~IGGdgS~~~ 107 (338)
T cd00363 94 DALVVIGGDGSYTG 107 (338)
T ss_pred CEEEEECCCHHHHH
T ss_conf 98999789269999
No 409
>TIGR00057 TIGR00057 Sua5/YciO/YrdC/YwlC family protein; InterPro: IPR004388 This entry includes the Sua5, YciO, YrdC and YwlC proteins. The yrdC family of genes codes for proteins that occur both independently and as a domain in proteins that have been implicated in regulation. An example for the latter case is the sua5 gene from yeast. Sua5 was identified as a suppressor of a translation initiation defect in cytochrome c and is required for normal growth in yeast . However, the function of the Sua5 protein remains unknown; Sua5 could act either at the transcriptional or the post-transcriptional levels to compensate for an aberrant translation start codon in the cyc gene. The crystal structure of the YrdC protein from Escherichia coli was determined at a resolution of 2.0 A. It structure suggests that YrdC may be a nucleic acid binding protein. An investigation of YrdC's binding affinities for single- and double-stranded RNA and DNA fragments as well as tRNAs demonstrates that YrdC binds preferentially to double-stranded RNA . .
Probab=51.68 E-value=18 Score=16.79 Aligned_cols=56 Identities=13% Similarity=0.208 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHCCCCCCCEEE-ECCCCCCCCCHHH---HHHHHHHHHH---CCEEEEECCCCCCCCC
Q ss_conf 789976431000247860797-1462157661346---8999998631---3608986131122234
Q gi|254780486|r 148 SFAENINKWRKSGGKGFPWIV-VESIYSMDGDKAP---LDDLVKIAND---YDGFIVVDEAHATGVC 207 (381)
Q Consensus 148 ~Le~~l~~~~~~~~~~~~~vv-~egv~Sm~G~~ap---L~~i~~l~~~---y~~~LivDEah~~Gv~ 207 (381)
.+++..+.. .++.++|+ ||+||.+.-+.-+ +++|.+++++ +.+.++|++.+-+.-|
T Consensus 12 ~i~~A~~~l----~~G~ivv~PTDTvYGiGa~a~ne~AV~r~~~iK~R~~~kPl~v~v~d~~~i~~~ 74 (215)
T TIGR00057 12 VIEQAVKIL----RKGGIVVYPTDTVYGIGADATNEDAVKRLYEIKGRPSNKPLIVLVSDLSEIEKL 74 (215)
T ss_pred HHHHHHHHH----HCCCEEEECCCCHHHHCCCCCCHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHH
T ss_conf 999999999----749479871854554046754768899999861689869779997373564443
No 410
>PRK03512 thiamine-phosphate pyrophosphorylase; Provisional
Probab=51.48 E-value=12 Score=17.87 Aligned_cols=20 Identities=5% Similarity=0.325 Sum_probs=17.4
Q ss_pred HHHHHHHHHHCCEEEEECCC
Q ss_conf 89999986313608986131
Q gi|254780486|r 182 LDDLVKIANDYDGFIVVDEA 201 (381)
Q Consensus 182 L~~i~~l~~~y~~~LivDEa 201 (381)
.+++.+||++|++.|+|++-
T Consensus 52 a~~~~~l~~~~~v~lIIND~ 71 (211)
T PRK03512 52 VVAAIALGRRYNARLFINDY 71 (211)
T ss_pred HHHHHHHHHHHCCEEEEECC
T ss_conf 99999999980985999786
No 411
>pfam00274 Glycolytic Fructose-bisphosphate aldolase class-I.
Probab=50.91 E-value=16 Score=17.10 Aligned_cols=61 Identities=16% Similarity=0.171 Sum_probs=38.7
Q ss_pred CHHHHHHHHHHHHHCCCCC---CCEE-EECCCCCCCCCHH---HHHHHHHHHHHCCEE------EEECCCCCCC
Q ss_conf 8147899764310002478---6079-7146215766134---689999986313608------9861311222
Q gi|254780486|r 145 NINSFAENINKWRKSGGKG---FPWI-VVESIYSMDGDKA---PLDDLVKIANDYDGF------IVVDEAHATG 205 (381)
Q Consensus 145 D~~~Le~~l~~~~~~~~~~---~~~v-v~egv~Sm~G~~a---pL~~i~~l~~~y~~~------LivDEah~~G 205 (381)
-+|+|.+.+.++.....+= |.++ +.++.-|...-.+ -|.++..+|.+.|.+ +++|-.|++-
T Consensus 112 GLDgL~eR~~~Y~~~GArFAKWRaVi~I~~~~PS~~~I~~Na~~LArYA~icQ~~glVPIVEPEVlmdG~H~ie 185 (348)
T pfam00274 112 GLDGLAERCAEYYKQGARFAKWRAVLKISPNTPSELAIEENANVLARYAAICQQNGLVPIVEPEILLDGDHDLE 185 (348)
T ss_pred CCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCHH
T ss_conf 64568999999997698522011255527999859999999999999999998659622003313104765689
No 412
>PRK09248 putative hydrolase; Validated
Probab=50.34 E-value=15 Score=17.38 Aligned_cols=21 Identities=14% Similarity=0.311 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHCCEEEEECCC
Q ss_conf 689999986313608986131
Q gi|254780486|r 181 PLDDLVKIANDYDGFIVVDEA 201 (381)
Q Consensus 181 pL~~i~~l~~~y~~~LivDEa 201 (381)
++.++.+.|+++|..|=+..+
T Consensus 141 D~e~v~~aa~e~g~~lEIN~s 161 (246)
T PRK09248 141 DIEAVVKAAAEHNVALEINNS 161 (246)
T ss_pred CHHHHHHHHHHHCCEEEEECC
T ss_conf 899999999984969999588
No 413
>TIGR00708 cobA cob(I)alamin adenosyltransferase; InterPro: IPR003724 ATP:cob(I)alamin (or ATP:corrinoid) adenosyltransferases (2.5.1.17 from EC), catalyse the conversion of cobalamin (vitamin B12) into its coenzyme form, adenosylcobalamin (coenzyme B12) . Adenosylcobalamin (AdoCbl) is required for the ativity of certain enzymes. AdoCbl contains an adenosyl moiety liganded to the cobalt ion of cobalamin via a covalent Co-C bond, and its synthesis is unique to certain prokaryotes. ATP:cob(I)alamin adenosyltransferases are classed into three groups: CobA-type , EutT-type and PduO-type . Each of the three enzyme types appears to be specialised for particular AdoCbl-dependent enzymes or for the de novo synthesis AdoCbl. PduO and EutT are distantly related, sharing short conserved motifs, while CobA is evolutionarily unrelated and is an example of convergent evolution. This entry represnts the ATP:cob(I)alamin adenosyltransferases CobA (Salmonella typhimurium), CobO (Pseudomonas denitrificans), and ButR (Escherichia coli). There is a high degree of sequence identity between these proteins . CobA is responsible for attaching the adenosyl moiety from ATP to the cobalt ion of the corrin ring, necessary for the convertion of cobalamin to adenosylcobalamin , . ; GO: 0005524 ATP binding, 0008817 cob(I)yrinic acid ac-diamide adenosyltransferase activity, 0009236 cobalamin biosynthetic process.
Probab=50.27 E-value=20 Score=16.59 Aligned_cols=54 Identities=24% Similarity=0.393 Sum_probs=33.1
Q ss_pred CCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHH
Q ss_conf 6897100454202677526664087640305688147899764310002478607971462157661346899999863
Q gi|254780486|r 112 QATDLIVYDKLVHASIREGINSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIAN 190 (381)
Q Consensus 112 ~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~ 190 (381)
+..|+|+.||.+- -..|-..|++..-+.|++- |...-+|+| |=-|| ++|.+++|
T Consensus 113 ~~~dlvLLDE~~~-------------~l~~GyL~veeV~~~L~~k----p~~~~vvlT-------GR~aP-~~L~~~AD 166 (191)
T TIGR00708 113 SEYDLVLLDELTV-------------ALKFGYLDVEEVVEVLQEK----PKSQHVVLT-------GRGAP-QELVELAD 166 (191)
T ss_pred CCCCEEEHHHHHH-------------HHHCCCCCHHHHHHHHHCC----CCCCEEEEE-------CCCCC-HHHHHHCC
T ss_conf 8877640342345-------------5534897889999998558----456778886-------68786-88997515
No 414
>PRK13398 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=50.26 E-value=20 Score=16.59 Aligned_cols=61 Identities=20% Similarity=0.168 Sum_probs=37.6
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCC---HHHHHHHHHHHHHCCEEEEECCCCCCC
Q ss_conf 88147899764310002478607971462157661---346899999863136089861311222
Q gi|254780486|r 144 NNINSFAENINKWRKSGGKGFPWIVVESIYSMDGD---KAPLDDLVKIANDYDGFIVVDEAHATG 205 (381)
Q Consensus 144 nD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~---~apL~~i~~l~~~y~~~LivDEah~~G 205 (381)
.+++++...+++.... +...++++--|+.++.|. +.|+..+..+++.++.-+++|-.|+.|
T Consensus 145 ~s~~~~~~a~eki~~~-Gn~~v~l~ERG~~t~~gy~~~v~D~~~i~~mk~~~~lPVi~D~SHs~G 208 (266)
T PRK13398 145 ATIEEWLYAAEYIMSE-GNENVVLCERGIRTFETYTRNTLDLAAVAVIKELSHLPIIVDPSHATG 208 (266)
T ss_pred CCHHHHHHHHHHHHHC-CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCEEECCCCCCC
T ss_conf 8889999999999847-998389984252457774435213677999985779998988853356
No 415
>pfam00365 PFK Phosphofructokinase.
Probab=49.98 E-value=20 Score=16.56 Aligned_cols=23 Identities=13% Similarity=0.208 Sum_probs=10.5
Q ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHCCE
Q ss_conf 079714621576613468999998631360
Q gi|254780486|r 165 PWIVVESIYSMDGDKAPLDDLVKIANDYDG 194 (381)
Q Consensus 165 ~~vv~egv~Sm~G~~apL~~i~~l~~~y~~ 194 (381)
.+|++=| ||+ +.....|+++++.
T Consensus 95 ~li~IGG----d~S---~~~a~~L~~~~~i 117 (279)
T pfam00365 95 ALVVIGG----DGS---YTGADLLTSEHGF 117 (279)
T ss_pred EEEEECC----CHH---HHHHHHHHHHCCC
T ss_conf 7999669----568---9999999997299
No 416
>PRK06466 acetolactate synthase 3 catalytic subunit; Validated
Probab=49.76 E-value=20 Score=16.54 Aligned_cols=78 Identities=10% Similarity=0.120 Sum_probs=40.7
Q ss_pred CHHHHHHHHHHHHHCCCCCCCEEEEC-CCCCCCCCHHHHHHHHHHHHHCCEEE--------EECCCC--CCCCCCCCCCE
Q ss_conf 81478997643100024786079714-62157661346899999863136089--------861311--22234777640
Q gi|254780486|r 145 NINSFAENINKWRKSGGKGFPWIVVE-SIYSMDGDKAPLDDLVKIANDYDGFI--------VVDEAH--ATGVCGPLGKG 213 (381)
Q Consensus 145 D~~~Le~~l~~~~~~~~~~~~~vv~e-gv~Sm~G~~apL~~i~~l~~~y~~~L--------ivDEah--~~Gv~G~~G~G 213 (381)
+.+++++.++...++ .+++|++- |+.. +. --+++.+|+++.++-+ +++|.| .+|++|..|.-
T Consensus 192 ~~~~i~~a~~~L~~A---krPvIl~G~g~~~--~~--a~~~l~~lae~l~~Pv~tt~~gkg~~p~~hp~~~G~~G~~g~~ 264 (574)
T PRK06466 192 HSGQIRKAVEMLLAA---KRPVIYSGGGVIL--GN--ASALLTELAHLLNLPVTNTLMGLGGFPGTDRQFLGMLGMHGTY 264 (574)
T ss_pred CHHHHHHHHHHHHHC---CCCEEEECCCCCC--CC--HHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 989999999999717---9988997886251--20--8999999999868881023214676667886436877777889
Q ss_pred EEEE-HHCCCCCCCCCC
Q ss_conf 1100-001346521001
Q gi|254780486|r 214 LTHI-IEERNNVIVMHS 229 (381)
Q Consensus 214 ~~~~-~~~~~~~iv~~T 229 (381)
.... +...|-+|++||
T Consensus 265 ~a~~~l~~aDlvl~lG~ 281 (574)
T PRK06466 265 EANMAMHHADVILAVGA 281 (574)
T ss_pred HHHHHHHCCCEEEECCC
T ss_conf 99999860796543476
No 417
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated
Probab=49.69 E-value=20 Score=16.53 Aligned_cols=80 Identities=13% Similarity=0.127 Sum_probs=36.0
Q ss_pred CHHHHHHHHHHHHHCCCCCCCEEEEC-CCCCCCCCHHHHHHHHHHHHHCCEEE--------EECCCCC--CCCCCCCCCE
Q ss_conf 81478997643100024786079714-62157661346899999863136089--------8613112--2234777640
Q gi|254780486|r 145 NINSFAENINKWRKSGGKGFPWIVVE-SIYSMDGDKAPLDDLVKIANDYDGFI--------VVDEAHA--TGVCGPLGKG 213 (381)
Q Consensus 145 D~~~Le~~l~~~~~~~~~~~~~vv~e-gv~Sm~G~~apL~~i~~l~~~y~~~L--------ivDEah~--~Gv~G~~G~G 213 (381)
|.+.+++.++....+ .+++|++- |+.. .|.-+ -+++.+|+++.++-+ +++|.|- +|.+|..|..
T Consensus 197 d~~~i~~a~~~L~~A---krPvii~G~Gv~~-sg~~a-~~~l~~lae~l~~PV~tt~~gkg~~p~~hp~~~G~~G~~g~~ 271 (594)
T PRK09107 197 DAEAIREAVALLANA---KRPVIYSGGGVIN-SGPEA-SRLLRELVELTGFPITSTLMGLGAYPASGKNWLGMLGMHGTY 271 (594)
T ss_pred CHHHHHHHHHHHHHC---CCCEEEECCCHHH-HHHHH-HHHHHHHHHHHCCCCEEHHCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 999999999999717---8987980640122-06899-999999999778781402102666577776667775777888
Q ss_pred EEE-EHHCCCCCCCCCC
Q ss_conf 110-0001346521001
Q gi|254780486|r 214 LTH-IIEERNNVIVMHS 229 (381)
Q Consensus 214 ~~~-~~~~~~~~iv~~T 229 (381)
... .+...|-+|++||
T Consensus 272 ~a~~~l~~aDlvl~lG~ 288 (594)
T PRK09107 272 EANMAMHDCDVMLCIGA 288 (594)
T ss_pred HHHHHHHCCCEEEEECC
T ss_conf 99976625886999677
No 418
>KOG0742 consensus
Probab=49.50 E-value=12 Score=17.96 Aligned_cols=30 Identities=37% Similarity=0.441 Sum_probs=20.9
Q ss_pred CCCHHHHH--------HHHHHHHH--CCEEEEECCCCCCC
Q ss_conf 66134689--------99998631--36089861311222
Q gi|254780486|r 176 DGDKAPLD--------DLVKIAND--YDGFIVVDEAHATG 205 (381)
Q Consensus 176 ~G~~apL~--------~i~~l~~~--y~~~LivDEah~~G 205 (381)
.||++||- +|.+-+++ -|.+|++|||-+|-
T Consensus 417 GGDVAPlG~qaVTkiH~lFDWakkS~rGLllFIDEADAFL 456 (630)
T KOG0742 417 GGDVAPLGAQAVTKIHKLFDWAKKSRRGLLLFIDEADAFL 456 (630)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEHHHHHHH
T ss_conf 7875552178899999987887515664499861167899
No 419
>CHL00174 accD acetyl-CoA carboxylase beta subunit; Reviewed
Probab=49.10 E-value=21 Score=16.48 Aligned_cols=10 Identities=40% Similarity=0.385 Sum_probs=5.3
Q ss_pred HHHHHHCCEE
Q ss_conf 9999977918
Q gi|254780486|r 327 AKNLQKKGFD 336 (381)
Q Consensus 327 ~~~L~~~Gi~ 336 (381)
++.|+++|+.
T Consensus 274 aEfllehG~i 283 (305)
T CHL00174 274 AEYLFHKGLF 283 (305)
T ss_pred HHHHHHCCCC
T ss_conf 6999977997
No 420
>TIGR00928 purB adenylosuccinate lyase; InterPro: IPR004769 A number of enzymes, belonging to the lyase class, for which fumarate is a substrate have been shown , to share a short conserved sequence around a methionine which is probably involved in the catalytic activity of this type of enzymes. Adenylosuccinate lyase is involved in purine ribonucleotide biosynthesis.; GO: 0004018 adenylosuccinate lyase activity, 0009152 purine ribonucleotide biosynthetic process.
Probab=47.59 E-value=14 Score=17.55 Aligned_cols=23 Identities=26% Similarity=0.413 Sum_probs=9.9
Q ss_pred CCCCCCHHHHHHHHHHHHHCCCC
Q ss_conf 43688589999999984012888
Q gi|254780486|r 69 LLCGNYNQHLELEEEAADFFGFE 91 (381)
Q Consensus 69 ~~~G~~~~~~~lE~~lA~~~g~e 91 (381)
.+.|+.+-|.++|+.+++++|.+
T Consensus 214 ~~~G~~~~~~~~E~~V~~~LGL~ 236 (469)
T TIGR00928 214 LGDGDRDWLEEVEERVTELLGLK 236 (469)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCC
T ss_conf 57885799999999999870872
No 421
>PRK04031 DNA primase; Provisional
Probab=47.03 E-value=15 Score=17.27 Aligned_cols=70 Identities=20% Similarity=0.227 Sum_probs=39.8
Q ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEE--EEHHCCCCCCCCCCCCCCCCCEEEE--E
Q ss_conf 79714621576613468999998631360898613112223477764011--0000134652100134656530267--5
Q gi|254780486|r 166 WIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLT--HIIEERNNVIVMHSCSKALGSSGAL--V 241 (381)
Q Consensus 166 ~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~--~~~~~~~~~iv~~TlsKa~g~~GG~--i 241 (381)
.|.+|| .-.| +.+.+||++-.+.+++| |++|..+. +...+-+.+++. ++-.|=- -
T Consensus 191 ~ia~~G------~~ip-~~i~~L~~~k~vtaF~D--------GDrGG~liLKELlqVadIDYVA------rAP~GKEVEe 249 (420)
T PRK04031 191 VIAVEG------TSVP-ETIIELSKKKTVTAFLD--------GDRGGELILKELLQVADIDYVA------RAPPGKEVEE 249 (420)
T ss_pred EEEECC------CCCC-HHHHHHHCCCEEEEEEC--------CCCCHHHHHHHHHHHCCEEEEE------ECCCCCCHHH
T ss_conf 786268------8888-89999863865899953--------8854378999998546735999------7989963532
Q ss_pred ECCCCCCCCCCCCCC
Q ss_conf 245100100001211
Q gi|254780486|r 242 GSNKIIYDYLINYAK 256 (381)
Q Consensus 242 ~~~~~ii~~l~~~~~ 256 (381)
+..++++..||++-+
T Consensus 250 LT~KEI~KALR~KVP 264 (420)
T PRK04031 250 LTKKEIAKALRNKVP 264 (420)
T ss_pred CCHHHHHHHHHCCCC
T ss_conf 688799999872488
No 422
>pfam06733 DEAD_2 DEAD_2. This represents a conserved region within a number of RAD3-like DNA-binding helicases that are seemingly ubiquitous - members include proteins of eukaryotic, bacterial and archaeal origin. RAD3 is involved in nucleotide excision repair, and forms part of the transcription factor TFIIH in yeast.
Probab=46.99 E-value=9.4 Score=18.62 Aligned_cols=13 Identities=31% Similarity=0.606 Sum_probs=10.9
Q ss_pred CCEEEEECCCCCC
Q ss_conf 3608986131122
Q gi|254780486|r 192 YDGFIVVDEAHAT 204 (381)
Q Consensus 192 y~~~LivDEah~~ 204 (381)
-|.++|+||||-+
T Consensus 139 ~~~IvI~DEAHNl 151 (168)
T pfam06733 139 KNSIVIFDEAHNI 151 (168)
T ss_pred CCEEEEEECCCCH
T ss_conf 8849999881375
No 423
>PRK11664 ATP-dependent RNA helicase HrpB; Provisional
Probab=46.83 E-value=12 Score=17.90 Aligned_cols=13 Identities=23% Similarity=0.261 Sum_probs=5.8
Q ss_pred CCCCHHHHHHHHH
Q ss_conf 7899999999999
Q gi|254780486|r 358 LNVDEPTIVKLFD 370 (381)
Q Consensus 358 a~~t~edi~~~~~ 370 (381)
+..+.++++....
T Consensus 555 a~i~~~~l~~~~~ 567 (812)
T PRK11664 555 LPLDIDELVQRCP 567 (812)
T ss_pred CCCCHHHHHHHHH
T ss_conf 6889999998867
No 424
>PRK11145 pflA pyruvate formate lyase-activating enzyme 1; Provisional
Probab=46.68 E-value=23 Score=16.24 Aligned_cols=15 Identities=27% Similarity=0.335 Sum_probs=7.6
Q ss_pred CCHHHHHHHHHHHHH
Q ss_conf 999999999999999
Q gi|254780486|r 360 VDEPTIVKLFDILPQ 374 (381)
Q Consensus 360 ~t~edi~~~~~~l~~ 374 (381)
.++|+++++.+.+++
T Consensus 225 ~~~e~l~~~~~i~~~ 239 (246)
T PRK11145 225 PSKETMERIKGILEQ 239 (246)
T ss_pred CCHHHHHHHHHHHHH
T ss_conf 799999999999998
No 425
>PRK13544 consensus
Probab=46.60 E-value=23 Score=16.24 Aligned_cols=28 Identities=18% Similarity=0.173 Sum_probs=16.6
Q ss_pred HHHHHCCEEEEECCC-------CCCCCCCCCCCEE
Q ss_conf 986313608986131-------1222347776401
Q gi|254780486|r 187 KIANDYDGFIVVDEA-------HATGVCGPLGKGL 214 (381)
Q Consensus 187 ~l~~~y~~~LivDEa-------h~~Gv~G~~G~G~ 214 (381)
.|...||-..++++. --+|++|++|.|=
T Consensus 6 nls~~yg~k~il~~vs~~i~~Gei~~l~G~NGsGK 40 (208)
T PRK13544 6 DLSCIRNNKVLFSNLSFTAKQNSLTLVIGNNGSGK 40 (208)
T ss_pred EEEEEECCEEEEECCEEEECCCCEEEEECCCCCCH
T ss_conf 38999999999944158982994999999999989
No 426
>TIGR02714 amido_AtzD_TrzD ring-opening amidohydrolases; InterPro: IPR014086 Members of this family are ring-opening amidohydrolases, including cyanuric acid amidohydrolase (3.5.2.15 from EC) (AtzD and TrzD) and barbiturase. Note that barbiturase does not act as defined for 3.5.2.1 from EC (barbiturate + water = malonate + urea) but rather catalyses the ring opening of barbiturase acid to ureidomalonic acid ..
Probab=46.04 E-value=14 Score=17.44 Aligned_cols=30 Identities=33% Similarity=0.410 Sum_probs=19.7
Q ss_pred CCCCC-CCCCCCCCCCCCEEEEEECCCCCCCCCC
Q ss_conf 13465-2100134656530267524510010000
Q gi|254780486|r 220 ERNNV-IVMHSCSKALGSSGALVGSNKIIYDYLI 252 (381)
Q Consensus 220 ~~~~~-iv~~TlsKa~g~~GG~i~~~~~ii~~l~ 252 (381)
+..+. |++| .|++.| |-|+.+...+.|.|-
T Consensus 236 L~~n~iiv~G-nsr~~g--g~lvIgH~vMkDaiD 266 (368)
T TIGR02714 236 LDRNEIIVVG-NSRAVG--GELVIGHSVMKDAID 266 (368)
T ss_pred ECCCEEEEEE-CCCCCC--CCEEEEEECCCCCCC
T ss_conf 1275389982-652123--554785211277124
No 427
>cd07362 HPCD_like Class III extradiol dioxygenases with similarity to homoprotocatechuate 2,3-dioxygenase, which catalyzes the key ring cleavage step in the metabolism of homoprotocatechuate. This subfamily of class III extradiol dioxygenases consists of two types of proteins with known enzymatic activities; 3,4-dihydroxyphenylacetate (homoprotocatechuate) 2,3-dioxygenase (HPCD) and 2-amino-5-chlorophenol 1,6-dioxygenase. HPCD catalyzes the key ring cleavage step in the metabolism of homoprotocatechuate (hpca), a central intermediate in the bacterial degradation of aromatic compounds. The enzyme incorporates both atoms of molecular oxygen into hpca, resulting in aromatic ring-opening to yield the product alpha-hydroxy-delta-carboxymethyl cis-muconic semialdehyde. 2-amino-5-chlorophenol 1,6-dioxygenase catalyzes the oxidization and subsequent ring-opening of 2-amino-5-chlorophenol, which is an intermediate during p-chloronitrobenzene degradation. The enzyme is probably a heterotetrame
Probab=45.96 E-value=23 Score=16.17 Aligned_cols=29 Identities=7% Similarity=0.174 Sum_probs=15.4
Q ss_pred CHHHHHHHHHHHHHCCCCCEEEECCCCHHH
Q ss_conf 589999999984012888516741660245
Q gi|254780486|r 74 YNQHLELEEEAADFFGFEKMLYFGSGYAAN 103 (381)
Q Consensus 74 ~~~~~~lE~~lA~~~g~e~al~~~sG~~An 103 (381)
.+-++++-+++++ .+.+-.+++++=|..+
T Consensus 29 i~a~~~i~~~i~~-~~pDtvVV~spHw~~~ 57 (272)
T cd07362 29 IKGMKEIRKRIEE-LKPDVILVISCHWMSS 57 (272)
T ss_pred HHHHHHHHHHHHH-CCCCEEEEECCCCCCC
T ss_conf 9999999999987-3989999986996750
No 428
>COG0178 UvrA Excinuclease ATPase subunit [DNA replication, recombination, and repair]
Probab=45.88 E-value=23 Score=16.17 Aligned_cols=90 Identities=22% Similarity=0.436 Sum_probs=48.8
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHCC--EEEEEECCCCCCCCC
Q ss_conf 988789886271022478999999998764179789989728999589799999999999779--189862288888887
Q gi|254780486|r 272 ACEALKLIKRKPALHKSLLQLINITDKIANKKIGFSSQSHIQSIVIGDNKSCLNIAKNLQKKG--FDIRAIRPPTVPINT 349 (381)
Q Consensus 272 a~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~~g~~~~s~I~~v~~gd~~~a~~~~~~L~~~G--i~v~~i~~PtVp~~~ 349 (381)
+-.|++..+..|...++|+.+. ..++|+-...+=.+-.=|-+.+=.+++.+|.+++ =-+...--||+
T Consensus 786 veEA~~FF~~~p~I~rkLqtL~-------dVGLgYi~LGQpatTLSGGEaQRvKLA~EL~k~~tg~TlYiLDEPTT---- 854 (935)
T COG0178 786 VEEALEFFEAIPKIARKLQTLV-------DVGLGYIKLGQPATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTT---- 854 (935)
T ss_pred HHHHHHHHHCCHHHHHHHHHHH-------HCCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCC----
T ss_conf 9999998760658999999999-------80755475487666666269999999999863468974899678987----
Q ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 03999628789999999999999999887387
Q gi|254780486|r 350 ARLRISITLNVDEPTIVKLFDILPQIISEGNS 381 (381)
Q Consensus 350 ~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~s 381 (381)
....+||.+++++|.+.++.+||
T Consensus 855 ---------GLH~~Di~kLl~VL~rLvd~GnT 877 (935)
T COG0178 855 ---------GLHFDDIKKLLEVLHRLVDKGNT 877 (935)
T ss_pred ---------CCCHHHHHHHHHHHHHHHHCCCE
T ss_conf ---------88999999999999999848987
No 429
>PRK06512 thiamine-phosphate pyrophosphorylase; Provisional
Probab=45.43 E-value=15 Score=17.27 Aligned_cols=20 Identities=5% Similarity=0.157 Sum_probs=17.0
Q ss_pred HHHHHHHHHHCCEEEEECCC
Q ss_conf 89999986313608986131
Q gi|254780486|r 182 LDDLVKIANDYDGFIVVDEA 201 (381)
Q Consensus 182 L~~i~~l~~~y~~~LivDEa 201 (381)
-++|+++|++||+.+||+|-
T Consensus 60 a~~L~~lc~~~gv~lIIND~ 79 (221)
T PRK06512 60 AEKYVPVIQEAGAAALIAGD 79 (221)
T ss_pred HHHHHHHHHHCCCCEEECCC
T ss_conf 99999999982991998897
No 430
>TIGR00631 uvrb excinuclease ABC, B subunit; InterPro: IPR004807 All proteins in this family for which functions are known are DNA helicases that function in the nucleotide excision repair and are endonucleases that make the 3' incision next to DNA damage. They are part of a pathway requiring UvrA, UvrB, UvrC, and UvrD homologs.; GO: 0009381 excinuclease ABC activity, 0006289 nucleotide-excision repair, 0005737 cytoplasm, 0009380 excinuclease repair complex.
Probab=45.25 E-value=9.8 Score=18.48 Aligned_cols=16 Identities=13% Similarity=0.229 Sum_probs=7.5
Q ss_pred CHHHHHHHHHHHHHHH
Q ss_conf 9999999999999998
Q gi|254780486|r 361 DEPTIVKLFDILPQII 376 (381)
Q Consensus 361 t~edi~~~~~~l~~v~ 376 (381)
++-|||.|++=|++..
T Consensus 429 ~~gQvdDL~~EI~~R~ 444 (667)
T TIGR00631 429 TDGQVDDLLSEIRQRV 444 (667)
T ss_pred CCCHHHHHHHHHHHHH
T ss_conf 8515888899999999
No 431
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated
Probab=44.96 E-value=24 Score=16.08 Aligned_cols=78 Identities=10% Similarity=0.134 Sum_probs=39.2
Q ss_pred CHHHHHHHHHHHHHCCCCCCCEEEEC-CCCCCCCCHHHHHHHHHHHHHCCEEE--------EECCCC--CCCCCCCCCCE
Q ss_conf 81478997643100024786079714-62157661346899999863136089--------861311--22234777640
Q gi|254780486|r 145 NINSFAENINKWRKSGGKGFPWIVVE-SIYSMDGDKAPLDDLVKIANDYDGFI--------VVDEAH--ATGVCGPLGKG 213 (381)
Q Consensus 145 D~~~Le~~l~~~~~~~~~~~~~vv~e-gv~Sm~G~~apL~~i~~l~~~y~~~L--------ivDEah--~~Gv~G~~G~G 213 (381)
+.+++++.++...++ .+++|++- |+-. -.-.+++.+|+++.|+-+ ++||-| .+|.+|-.|.-
T Consensus 192 ~~~~i~~a~~~L~~A---krPvIi~G~g~~~----~~a~~~l~~lae~l~~PV~tt~~gkg~~~~~hp~~~G~~G~~g~~ 264 (574)
T PRK07979 192 HKGQIKRALQTLVAA---KKPVVYVGGGAIN----AACHQQLKELVEKLNLPVVSSLMGLGAFPATHRQSLGMLGMHGTY 264 (574)
T ss_pred CHHHHHHHHHHHHHC---CCCEEEECCCCCC----HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 899999999999727---9988998277343----548999999998719877874045678998774226777777868
Q ss_pred EE-EEHHCCCCCCCCCC
Q ss_conf 11-00001346521001
Q gi|254780486|r 214 LT-HIIEERNNVIVMHS 229 (381)
Q Consensus 214 ~~-~~~~~~~~~iv~~T 229 (381)
.. +.....|-+|.+|+
T Consensus 265 ~~~~~l~~aDlvl~lG~ 281 (574)
T PRK07979 265 EANMTMHNADVIFAVGV 281 (574)
T ss_pred HHHHHHHCCCEEEEEEE
T ss_conf 99999843886999985
No 432
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=44.35 E-value=24 Score=16.02 Aligned_cols=78 Identities=19% Similarity=0.333 Sum_probs=40.2
Q ss_pred CHHHHHHHHHHHHHCCCCCCCEEEEC-CCCCCCCCHHHHHHHHHHHHHCCEEE--------EECCCCC--CCCCCCCCCE
Q ss_conf 81478997643100024786079714-62157661346899999863136089--------8613112--2234777640
Q gi|254780486|r 145 NINSFAENINKWRKSGGKGFPWIVVE-SIYSMDGDKAPLDDLVKIANDYDGFI--------VVDEAHA--TGVCGPLGKG 213 (381)
Q Consensus 145 D~~~Le~~l~~~~~~~~~~~~~vv~e-gv~Sm~G~~apL~~i~~l~~~y~~~L--------ivDEah~--~Gv~G~~G~G 213 (381)
+.+.+++..+....+ .+++|++- |+.. .| -.+++.+|+++.|+-+ +++|.|- +|.+|..|.-
T Consensus 186 ~~~~i~~a~~lL~~A---~rPvIi~G~g~~~-~~---a~~~l~~lae~l~~Pv~tt~~~kg~~~~~hpl~~G~~G~~g~~ 258 (589)
T PRK07525 186 GEQSLAEAAELLSEA---KFPVILSGAGVVL-SG---AIEECKALAERLDAPVCCGYLHNDAFPGSHPLWVGPLGYNGSK 258 (589)
T ss_pred CHHHHHHHHHHHHCC---CCCEEEECCCCCH-HH---HHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCCCCCCHH
T ss_conf 999999999999728---9978998987142-11---8999999999849786753025787567776556766654469
Q ss_pred EE-EEHHCCCCCCCCCC
Q ss_conf 11-00001346521001
Q gi|254780486|r 214 LT-HIIEERNNVIVMHS 229 (381)
Q Consensus 214 ~~-~~~~~~~~~iv~~T 229 (381)
.. +.+...|-+|.+||
T Consensus 259 ~a~~~l~~aDlvl~lG~ 275 (589)
T PRK07525 259 AAMELIAQADVVLALGT 275 (589)
T ss_pred HHHHHHHCCCCEEEEEC
T ss_conf 99999842583577403
No 433
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=44.28 E-value=9.4 Score=18.61 Aligned_cols=31 Identities=10% Similarity=0.038 Sum_probs=15.4
Q ss_pred EEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC
Q ss_conf 8980344656677988999999999986378688722443
Q gi|254780486|r 31 IWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLL 70 (381)
Q Consensus 31 ~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~~ 70 (381)
++.-|||- ...|++..-+ ..++++...||+=
T Consensus 10 lIVpSSnt----TmE~ef~~m~-----~~ervs~H~sRmp 40 (238)
T COG3473 10 LIVPSSNT----TMEPEFWRML-----PSERVSVHTSRMP 40 (238)
T ss_pred EEEECCCC----CCCHHHHHHH-----HHCCCEEEECCCC
T ss_conf 79816997----4445788741-----2316213332421
No 434
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=43.85 E-value=25 Score=15.97 Aligned_cols=49 Identities=31% Similarity=0.592 Sum_probs=33.3
Q ss_pred CCHHHHHHHHHHHHHC--C--EEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 8979999999999977--9--18986228888888703999628789999999999999999887387
Q gi|254780486|r 318 GDNKSCLNIAKNLQKK--G--FDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEGNS 381 (381)
Q Consensus 318 gd~~~a~~~~~~L~~~--G--i~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~~s 381 (381)
|-+.+=.+++.+|-++ | +|+ +-=| |.....+||++++++|.+.++.+||
T Consensus 833 GGEaQRlKLa~~L~~~~~~~tlyi--lDEP-------------TtGLH~~Di~~Ll~~l~~Lv~~G~t 885 (944)
T PRK00349 833 GGEAQRVKLAKELSKRSTGKTLYI--LDEP-------------TTGLHFEDIRKLLEVLHRLVDKGNT 885 (944)
T ss_pred HHHHHHHHHHHHHCCCCCCCEEEE--ECCC-------------CCCCCHHHHHHHHHHHHHHHHCCCE
T ss_conf 589999999999747788987999--7588-------------7678989999999999999968997
No 435
>PRK06456 acetolactate synthase catalytic subunit; Reviewed
Probab=43.83 E-value=25 Score=15.97 Aligned_cols=78 Identities=15% Similarity=0.222 Sum_probs=39.6
Q ss_pred CHHHHHHHHHHHHHCCCCCCCEEEE-CCCCCCCCCHHHHHHHHHHHHHCCEEEE--------ECCCC--CCCCCCCCCCE
Q ss_conf 8147899764310002478607971-4621576613468999998631360898--------61311--22234777640
Q gi|254780486|r 145 NINSFAENINKWRKSGGKGFPWIVV-ESIYSMDGDKAPLDDLVKIANDYDGFIV--------VDEAH--ATGVCGPLGKG 213 (381)
Q Consensus 145 D~~~Le~~l~~~~~~~~~~~~~vv~-egv~Sm~G~~apL~~i~~l~~~y~~~Li--------vDEah--~~Gv~G~~G~G 213 (381)
|.+.+++..+...++ .+++|++ -|+..- |- .+++.+|+++.++-++ ++|-| .+|++|..|+.
T Consensus 193 d~~~i~~a~~lL~~A---krPvIl~G~G~~~~-~a---~~~l~~lae~l~~Pv~tT~~gkg~~p~~hp~~~G~~G~~g~~ 265 (572)
T PRK06456 193 DRQKIKKAAEILINA---ERPIILVGTGVVWS-NA---TPEVLELAELLHIPIVSTFPGKSAIPHDHPLYFGAMGYYGRA 265 (572)
T ss_pred CHHHHHHHHHHHHHC---CCCEEEEECCCCCC-CC---HHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCCCH
T ss_conf 999999999999818---99889995582414-36---499999999839981220145555345786556877876878
Q ss_pred EEEEHH-CCCCCCCCCC
Q ss_conf 110000-1346521001
Q gi|254780486|r 214 LTHIIE-ERNNVIVMHS 229 (381)
Q Consensus 214 ~~~~~~-~~~~~iv~~T 229 (381)
.....- ..|-+|++||
T Consensus 266 ~~~~~~~~aDlvl~vG~ 282 (572)
T PRK06456 266 EASMAALESDAMLVVGA 282 (572)
T ss_pred HHHHHHHCCCEEEEECC
T ss_conf 99998751485999806
No 436
>KOG0662 consensus
Probab=43.30 E-value=12 Score=17.95 Aligned_cols=18 Identities=11% Similarity=0.143 Sum_probs=7.4
Q ss_pred CCCCCCCEEEEEECCCCCCC
Q ss_conf 34656530267524510010
Q gi|254780486|r 230 CSKALGSSGALVGSNKIIYD 249 (381)
Q Consensus 230 lsKa~g~~GG~i~~~~~ii~ 249 (381)
++.|||.. .-+-+.+++.
T Consensus 147 larafgip--vrcysaevvt 164 (292)
T KOG0662 147 LARAFGIP--VRCYSAEVVT 164 (292)
T ss_pred HHHHCCCC--EEEEECEEEE
T ss_conf 35541874--4763010024
No 437
>cd02511 Beta4Glucosyltransferase UDP-glucose LOS-beta-1,4 glucosyltransferase is required for biosynthesis of lipooligosaccharide. UDP-glucose: lipooligosaccharide (LOS) beta-1-4-glucosyltransferase catalyzes the addition of the first residue, glucose, of the lacto-N-neotetrase structure to HepI of the LOS inner core. LOS is the major constituent of the outer leaflet of the outer membrane of gram-positive bacteria. It consists of a short oligosaccharide chain of variable composition (alpha chain) attached to a branched inner core which is lined in turn to lipid A. Beta 1,4 glucosyltransferase is required to attach the alpha chain to the inner core.
Probab=42.95 E-value=26 Score=15.89 Aligned_cols=22 Identities=14% Similarity=0.149 Sum_probs=11.2
Q ss_pred HHHHHHHHHCCC-CCEEEECCCC
Q ss_conf 999998401288-8516741660
Q gi|254780486|r 79 ELEEEAADFFGF-EKMLYFGSGY 100 (381)
Q Consensus 79 ~lE~~lA~~~g~-e~al~~~sG~ 100 (381)
.|++.|...... ++.+++-||-
T Consensus 14 ~l~~~l~sl~~~~deiivvDs~S 36 (229)
T cd02511 14 NIERCLESVKWAVDEIIVVDSGS 36 (229)
T ss_pred HHHHHHHHHHCCCCEEEEEECCC
T ss_conf 89999998764398899995979
No 438
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=42.74 E-value=18 Score=16.80 Aligned_cols=21 Identities=10% Similarity=0.317 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHCCEEEEECCC
Q ss_conf 689999986313608986131
Q gi|254780486|r 181 PLDDLVKIANDYDGFIVVDEA 201 (381)
Q Consensus 181 pL~~i~~l~~~y~~~LivDEa 201 (381)
-.+++++||++|++.++|++=
T Consensus 53 ~a~~~~~lc~~~~v~liINd~ 73 (211)
T COG0352 53 LAEKLRALCQKYGVPLIINDR 73 (211)
T ss_pred HHHHHHHHHHHHCCEEEECCC
T ss_conf 999999999981980996683
No 439
>TIGR03133 malonate_beta malonate decarboxylase, beta subunit. Members of this protein family are the beta subunit of malonate decarboxylase. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. In the malonate decarboxylase complex, the beta subunit appears to act as a malonyl-CoA decarboxylase.
Probab=42.66 E-value=22 Score=16.29 Aligned_cols=41 Identities=12% Similarity=0.143 Sum_probs=16.0
Q ss_pred HCCCCC-CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCC
Q ss_conf 013465-2100134656530267524510010000121100001357
Q gi|254780486|r 219 EERNNV-IVMHSCSKALGSSGALVGSNKIIYDYLINYAKPFIYTTSP 264 (381)
Q Consensus 219 ~~~~~~-iv~~TlsKa~g~~GG~i~~~~~ii~~l~~~~~~~ifst~l 264 (381)
+.-|.+ +++|+-+ +||. ++|+.+-.+ ++...-.+.+|-+++
T Consensus 135 g~IPqIsvV~G~~~-c~GG-~a~~~~l~D---~iIm~~~~~ifl~GP 176 (274)
T TIGR03133 135 AAVPVIGVIGGRVG-CFGG-MGIAAGLCS---YLIMTEEGRLGLSGP 176 (274)
T ss_pred CCCCEEEEEECCCC-CCCC-EEECCCCCC---EEEEECCCEEECCCC
T ss_conf 99987999955455-6677-077002373---899978957953380
No 440
>TIGR01967 DEAH_box_HrpA ATP-dependent helicase HrpA; InterPro: IPR010222 This entry represents HrpA, one of two related but uncharacterised DEAH-box ATP-dependent helicases in many Proteobacteria and a few high-GC Gram-positive bacteria. HrpA is about 1300 amino acids long, while its paralog HrpB, also uncharacterised, is about 800 amino acids long. Related characterised eukaryotic proteins are RNA helicases associated with pre-mRNA processing.; GO: 0005524 ATP binding, 0008026 ATP-dependent helicase activity.
Probab=42.35 E-value=15 Score=17.28 Aligned_cols=152 Identities=15% Similarity=0.272 Sum_probs=69.4
Q ss_pred CCCCCEEEECCCCCCCCCHHHHHHHHH--HHHHCCEEEEECCCC--CCCCCCCCCCEEE-EEHHCCCCC-CCCCC-----
Q ss_conf 478607971462157661346899999--863136089861311--2223477764011-000013465-21001-----
Q gi|254780486|r 161 GKGFPWIVVESIYSMDGDKAPLDDLVK--IANDYDGFIVVDEAH--ATGVCGPLGKGLT-HIIEERNNV-IVMHS----- 229 (381)
Q Consensus 161 ~~~~~~vv~egv~Sm~G~~apL~~i~~--l~~~y~~~LivDEah--~~Gv~G~~G~G~~-~~~~~~~~~-iv~~T----- 229 (381)
+...+-++||||- |.|+.. .-.+|+. +|||||| |+=+ +.=-|+. ..+.-+||+ ||++|
T Consensus 157 ~~t~VKLmTDGiL--------LAE~Q~DRfL~~YDT-IIIDEAHERSLNI--DFLLGYLK~lL~rRPDLKiIITSATID~ 225 (1320)
T TIGR01967 157 SNTLVKLMTDGIL--------LAETQQDRFLERYDT-IIIDEAHERSLNI--DFLLGYLKQLLPRRPDLKIIITSATIDP 225 (1320)
T ss_pred CCCEEEEHHHHHH--------HHHHHHHHHHHHCCC-EEECCHHHHHHHH--HHHHHHHHHHCCCCCCCCEEEECCCCCH
T ss_conf 8543630322358--------998520022210673-3651123112338--8999888763266886525740023574
Q ss_pred --CCCCCCCEEEEEECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC-C
Q ss_conf --3465653026752451001000012110000135775025789887898862710224789999999987641797-8
Q gi|254780486|r 230 --CSKALGSSGALVGSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLINITDKIANKKIG-F 306 (381)
Q Consensus 230 --lsKa~g~~GG~i~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~~~~~~~~~~~~g-~ 306 (381)
||+-|...-| -+.-||+ ..||||=-.+=-.|.....--..-.+. . -...+..+....+++...... -
T Consensus 226 ERFs~HFn~AeG---kPaPIIE---VSGRTyPVe~RYRPL~~~~~~~Gnqi~-~---d~d~~~ai~~AvdEL~~e~~~eG 295 (1320)
T TIGR01967 226 ERFSRHFNNAEG---KPAPIIE---VSGRTYPVEVRYRPLVEEQEDDGNQIV-I---DLDQLEAILAAVDELVAEGPDEG 295 (1320)
T ss_pred HHHHHHHCCCCC---CCCCEEE---ECCCCCCCCEEECCCCCCCCCCCCEEE-E---CCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 468786227888---9887555---278546651111687644488777041-0---11278899999999974275557
Q ss_pred CCCCCEEEEEECCHHHHHHHHHHHHHCC
Q ss_conf 9989728999589799999999999779
Q gi|254780486|r 307 SSQSHIQSIVIGDNKSCLNIAKNLQKKG 334 (381)
Q Consensus 307 ~~~s~I~~v~~gd~~~a~~~~~~L~~~G 334 (381)
.+++-|..++-| +..-.+.++.|.++.
T Consensus 296 kGPGDiLIFlpG-EREIRDaAE~L~k~~ 322 (1320)
T TIGR01967 296 KGPGDILIFLPG-EREIRDAAEILRKRN 322 (1320)
T ss_pred CCCCCEEEECCC-CCCHHHHHHHHHCCC
T ss_conf 899726763788-863689999984468
No 441
>cd00740 MeTr MeTr subgroup of pterin binding enzymes. This family includes cobalamin-dependent methyltransferases such as methyltetrahydrofolate, corrinoid iron-sulfur protein methyltransferase (MeTr) and methionine synthase (MetH). Cobalamin-dependent methyltransferases catalyze the transfer of a methyl group via a methyl- cob(III)amide intermediate. These include MeTr, a functional heterodimer, and the folate binding domain of MetH.
Probab=41.46 E-value=27 Score=15.74 Aligned_cols=51 Identities=20% Similarity=0.300 Sum_probs=32.7
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEE---ECC
Q ss_conf 56881478997643100024786079714621576613468999998631360898---613
Q gi|254780486|r 142 PHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIV---VDE 200 (381)
Q Consensus 142 ~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~Li---vDE 200 (381)
.--|++.+|.-|+.+. +++ ++.||- +...--.+.++..|+++||+.++ +||
T Consensus 76 DS~~~~~iEaaLk~~~-----Gr~--iINSis-~e~g~er~~~i~pLakkyga~vI~L~~de 129 (252)
T cd00740 76 DSTNWEVIEAGLKCCQ-----GKC--VVNSIN-LEDGEERFLKVARLAKEHGAAVVVLAFDE 129 (252)
T ss_pred ECCCHHHHHHHHHHCC-----CCE--EEECCC-CCCCHHHHHHHHHHHHHCCCEEEEEEECC
T ss_conf 1798999999999769-----986--774163-44548899999999987099899995289
No 442
>cd00948 FBP_aldolase_I_a Fructose-1,6-bisphosphate aldolase. The enzyme catalyzes the cleavage of fructose 1,6-bisphosphate to glyceraldehyde 3-phosphate and dihydroxyacetone phosphate (DHAP). This family includes proteins found in vertebrates, plants, and bacterial plant pathogens. Mutations in the aldolase genes in humans cause hemolytic anemia and hereditary fructose intolerance. The enzyme is a member of the class I aldolase family, which utilizes covalent catalysis through a Schiff base formed between a lysine residue of the enzyme and ketose substrates.
Probab=41.05 E-value=21 Score=16.43 Aligned_cols=60 Identities=20% Similarity=0.268 Sum_probs=36.8
Q ss_pred CHHHHHHHHHHHHHCCCCCCCE----EEECCCCCCCCCHH---HHHHHHHHHHHCCEE------EEECCCCCC
Q ss_conf 8147899764310002478607----97146215766134---689999986313608------986131122
Q gi|254780486|r 145 NINSFAENINKWRKSGGKGFPW----IVVESIYSMDGDKA---PLDDLVKIANDYDGF------IVVDEAHAT 204 (381)
Q Consensus 145 D~~~Le~~l~~~~~~~~~~~~~----vv~egv~Sm~G~~a---pL~~i~~l~~~y~~~------LivDEah~~ 204 (381)
-+|.|.+.+.++.+...+=.+| -+.|+.-|..--.+ -|.++..+|.+.|.+ +++|-.|++
T Consensus 114 GLDgL~eR~~~Y~~~GArFAKWRaVi~I~~~~PS~~~I~~Na~~LArYA~icQ~~glVPIVEPEVLmdG~H~i 186 (330)
T cd00948 114 GLDGLAERCAKYYKQGARFAKWRAVLKIGNGTPSELAIKENAHGLARYAAICQENGLVPIVEPEVLMDGDHDI 186 (330)
T ss_pred CCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCH
T ss_conf 7453999999999869982340267876999986999999899999999999985981321501001676347
No 443
>TIGR01858 tag_bisphos_ald class II aldolase, tagatose bisphosphate family; InterPro: IPR011288 This entry describes tagatose-1,6-bisphosphate aldolases, and perhaps other closely related class II aldolases. This tetrameric, Zn2+-dependent enzyme is related to the class II fructose bisphosphate aldolase; fructose 1,6-bisphosphate and tagatose 1,6 bisphosphate differ only in chirality at C4 , .; GO: 0008270 zinc ion binding, 0016832 aldehyde-lyase activity, 0019512 lactose catabolic process via tagatose-6-phosphate.
Probab=40.81 E-value=28 Score=15.68 Aligned_cols=56 Identities=20% Similarity=0.440 Sum_probs=38.8
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCEEEECC-CCCCCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCC
Q ss_conf 568814789976431000247860797146-2157661346899999863136089861311222347776
Q gi|254780486|r 142 PHNNINSFAENINKWRKSGGKGFPWIVVES-IYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLG 211 (381)
Q Consensus 142 ~HnD~~~Le~~l~~~~~~~~~~~~~vv~eg-v~Sm~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G 211 (381)
.|.+++|.++++..--++ +++|| -||..-.+.-.+++++-|.+|++.+ ||= +|+-|
T Consensus 81 Hhe~~ddI~~kv~aGvkS-------~MIDaSHl~F~~Nv~lvk~VVdFcHr~D~sV---EAE----LG~Lg 137 (282)
T TIGR01858 81 HHESFDDIKQKVAAGVKS-------VMIDASHLPFEQNVKLVKEVVDFCHRYDASV---EAE----LGRLG 137 (282)
T ss_pred CCCCHHHHHHHHHCCCCE-------EEECCCCCCHHHHHHHHHHHHHHHCCCCCEE---EEE----ECCCC
T ss_conf 468876889997537723-------5565777888887788666664421678657---666----08465
No 444
>PRK00339 minC septum formation inhibitor; Reviewed
Probab=40.72 E-value=28 Score=15.67 Aligned_cols=16 Identities=19% Similarity=0.110 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHCCEEE
Q ss_conf 6899999863136089
Q gi|254780486|r 181 PLDDLVKIANDYDGFI 196 (381)
Q Consensus 181 pL~~i~~l~~~y~~~L 196 (381)
++++|.+++++||...
T Consensus 70 dl~~L~~~l~~~gl~~ 85 (249)
T PRK00339 70 DLPGLMRICRRHGLRT 85 (249)
T ss_pred CHHHHHHHHHHCCCEE
T ss_conf 7999999999889989
No 445
>TIGR00250 TIGR00250 conserved hypothetical protein TIGR00250; InterPro: IPR005227 Holliday junction resolvases (HJRs) are key enzymes of DNA recombination. The principal HJRs are now known or confidently predicted for all bacteria and archaea whose genomes have been completely sequenced, with many species encoding multiple potential HJRs. Structural and evolutionary relationships of HJRs and related nucleases suggests that the HJR function has evolved independently from at least four distinct structural folds, namely RNase H, endonuclease, endonuclease VIIcolicin E and RusA (IPR008822 from INTERPRO): The endonuclease fold, whose structural prototypes are the phage exonuclease, the very short patch repair nuclease (Vsr) and type II restriction enzymes, is shown to encompass by far a greater diversity of nucleases than previously suspected. This fold unifies archaeal HJRs (IPR002732 from INTERPRO), repair nucleases such as RecB (IPR004586 from INTERPRO) and Vsr (IPR004603 from INTERPRO), restriction enzymes and a variety of predicted nucleases whose specific activities remain to be determined. The RNase H fold characterises the RuvC family (IPR002176 from INTERPRO), which is nearly ubiquitous in bacteria, and in addition the YqgF family (IPR005227 from INTERPRO). The proteins of this family, typified by Escherichia coli YqgF, are likely to function as an alternative to RuvC in most bacteria, but could be the principal HJRs in low-GC Gram-positive bacteria and Aquifex. Endonuclease VII of phage T4 (IPR004211 from INTERPRO) is shown to serve as a structural template for many nucleases, including McrA and other type II restriction enzymes. Together with colicin E7, endonuclease VII defines a distinct metal-dependent nuclease fold. Horizontal gene transfer, lineage-specific gene loss and gene family expansion, and non-orthologous gene displacement seem to have been major forces in the evolution of HJRs and related nucleases. A remarkable case of displacement is seen in the Lyme disease spirochete Borrelia burgdorferi, which does not possess any of the typical HJRs, but instead encodes, in its chromosome and each of the linear plasmids, members of the exonuclease family predicted to function as HJRs. The diversity of HJRs and related nucleases in bacteria and archaea contrasts with their near absence in eukaryotes. The few detected eukaryotic representatives of the endonuclease fold and the RNase H fold have probably been acquired from bacteria via horizontal gene transfer. The identity of the principal HJR(s) involved in recombination in eukaryotes remains uncertain; this function could be performed by topoisomerase IB or by a novel, so far undetected, class of enzymes. Likely HJRs and related nucleases were identified in the genomes of numerous bacterial and eukaryotic DNA viruses. Gene flow between viral and cellular genomes has probably played a major role in the evolution of this class of enzymes. This family represents the YqgF family of putative Holliday junction resolvases. With the exception of the spirochetes, the YqgF family is represented in all bacterial lineages, including the mycoplasmas with their highly degenerate genomes. The RuvC resolvases are conspicuously absent in the low-GC Gram-positive bacterial lineage, with the exception of Ureaplasma urealyticum (Q9PQY7 from SWISSPROT, ). Furthermore, loss of function ruvC mutants of E. coli show a residual HJR activity that cannot be ascribed to the prophage-encoded RusA resolvase . This suggests that the YqgF family proteins could be alternative HJRs whose function partially overlaps with that of RuvC . ; GO: 0000150 recombinase activity, 0003677 DNA binding, 0004518 nuclease activity, 0006281 DNA repair, 0006310 DNA recombination, 0006974 response to DNA damage stimulus.
Probab=40.50 E-value=28 Score=15.65 Aligned_cols=51 Identities=24% Similarity=0.498 Sum_probs=31.5
Q ss_pred CCH--HHHHHHHHHHHHCCCCCCCEEEECCC-CCCCCCHHHHHHHH-----HHHHHCCEEE-EECCC
Q ss_conf 881--47899764310002478607971462-15766134689999-----9863136089-86131
Q gi|254780486|r 144 NNI--NSFAENINKWRKSGGKGFPWIVVESI-YSMDGDKAPLDDLV-----KIANDYDGFI-VVDEA 201 (381)
Q Consensus 144 nD~--~~Le~~l~~~~~~~~~~~~~vv~egv-~Sm~G~~apL~~i~-----~l~~~y~~~L-ivDEa 201 (381)
.|+ ..++++++++... .||+ |+ +.|+|++.|+.+-. .|..+|++-+ +.||=
T Consensus 36 ~d~Gl~~i~~l~ke~~~d------~~vv-GlP~nM~Gt~g~~~~~~~kFA~r~~~~~~v~v~l~DER 95 (133)
T TIGR00250 36 PDWGLSRIEELLKEWKVD------KIVV-GLPLNMDGTVGPLTKRAQKFAKRLEGRFGVPVELMDER 95 (133)
T ss_pred CCCCHHHHHHHHHHCCCC------EEEE-CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECCC
T ss_conf 862179999987315889------7886-17878788725026888999988655406643786176
No 446
>COG2256 MGS1 ATPase related to the helicase subunit of the Holliday junction resolvase [DNA replication, recombination, and repair]
Probab=39.92 E-value=20 Score=16.52 Aligned_cols=73 Identities=10% Similarity=0.097 Sum_probs=41.5
Q ss_pred HHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCC---CCEEEECC-----CCCCCCCHHH----HHHHHHHHHHCCEEE
Q ss_conf 26664087640305688147899764310002478---60797146-----2157661346----899999863136089
Q gi|254780486|r 129 EGINSGKAQAIAIPHNNINSFAENINKWRKSGGKG---FPWIVVES-----IYSMDGDKAP----LDDLVKIANDYDGFI 196 (381)
Q Consensus 129 ~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~---~~~vv~eg-----v~Sm~G~~ap----L~~i~~l~~~y~~~L 196 (381)
..+-+|+++++.|+-.+-+++++.|++.-....++ ..+++.|. +-+.+||.=- |+-...+.++.. .+
T Consensus 148 n~ALlSR~~vf~lk~L~~~di~~~l~ra~~~~~rgl~~~~~~i~~~a~~~l~~~s~GD~R~aLN~LE~~~~~~~~~~-~~ 226 (436)
T COG2256 148 NPALLSRARVFELKPLSSEDIKKLLKRALLDEERGLGGQIIVLDEEALDYLVRLSNGDARRALNLLELAALSAEPDE-VL 226 (436)
T ss_pred CHHHHHHHHEEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCC-CC
T ss_conf 38886110415651699899999999998654137776556688899999998628619999889999998627775-24
Q ss_pred EECCCC
Q ss_conf 861311
Q gi|254780486|r 197 VVDEAH 202 (381)
Q Consensus 197 ivDEah 202 (381)
+.|...
T Consensus 227 ~~~~l~ 232 (436)
T COG2256 227 ILELLE 232 (436)
T ss_pred CHHHHH
T ss_conf 799999
No 447
>TIGR00604 rad3 DNA repair helicase (rad3); InterPro: IPR013020 All proteins in this family for which functions are known are DNA-DNA helicases that function in the initiation of transcription and nucleotide excision repair as part of the TFIIH complex. .
Probab=39.78 E-value=15 Score=17.39 Aligned_cols=17 Identities=41% Similarity=0.896 Sum_probs=8.8
Q ss_pred HHHHHC-CEEEEECCCCC
Q ss_conf 986313-60898613112
Q gi|254780486|r 187 KIANDY-DGFIVVDEAHA 203 (381)
Q Consensus 187 ~l~~~y-~~~LivDEah~ 203 (381)
+|.+.| +.++|+||||=
T Consensus 272 ~L~~dysdsIVifDEAHN 289 (813)
T TIGR00604 272 ELKKDYSDSIVIFDEAHN 289 (813)
T ss_pred HHHHCCCCCEEEEECCCC
T ss_conf 310012662589612258
No 448
>cd01123 Rad51_DMC1_radA Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a similiar recombination reaction as RecA, using ATP-dependent DNA binding activity and a DNA-dependent ATPase. However, this reaction is less efficient and requires accessory proteins such as RAD55/57 .
Probab=39.74 E-value=29 Score=15.58 Aligned_cols=62 Identities=15% Similarity=0.298 Sum_probs=35.9
Q ss_pred CCEEECCCCHHHHHHHHHHHHHCC--CCCCCEEEECCC---CCCC--C--CHHH--------HHHHHHHHHHCCEEEEE
Q ss_conf 640305688147899764310002--478607971462---1576--6--1346--------89999986313608986
Q gi|254780486|r 137 QAIAIPHNNINSFAENINKWRKSG--GKGFPWIVVESI---YSMD--G--DKAP--------LDDLVKIANDYDGFIVV 198 (381)
Q Consensus 137 ~~~~f~HnD~~~Le~~l~~~~~~~--~~~~~~vv~egv---~Sm~--G--~~ap--------L~~i~~l~~~y~~~Liv 198 (381)
++..++-+|.+++...+....... .....+||+|+| |..+ | ..+. +..|..++++|++.+++
T Consensus 87 ~i~~~~~~~~~~l~~~l~~l~~~l~~~~~v~LvVIDSia~l~r~e~~~~~~~~~r~~~l~~~~~~L~~lA~~~~~aVvv 165 (235)
T cd01123 87 NIYVARAYNSDHQLQLLEELEAILIESSRIKLVIVDSVTALFRAEFDGRGELAERQQHLAKLLRTLKRLADEFNVAVVI 165 (235)
T ss_pred CEEEECCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEE
T ss_conf 5479637999999999999999873037723999961045556664488644789999999999999999980979999
No 449
>PRK09505 malS periplasmic alpha-amylase precursor; Reviewed
Probab=39.72 E-value=29 Score=15.57 Aligned_cols=64 Identities=23% Similarity=0.343 Sum_probs=45.7
Q ss_pred CCEEECCCCHHHHHHHHHHHHHCCCCCCCEE--EECCC--------------C--------------CCCCCHHHHHHHH
Q ss_conf 6403056881478997643100024786079--71462--------------1--------------5766134689999
Q gi|254780486|r 137 QAIAIPHNNINSFAENINKWRKSGGKGFPWI--VVESI--------------Y--------------SMDGDKAPLDDLV 186 (381)
Q Consensus 137 ~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~v--v~egv--------------~--------------Sm~G~~apL~~i~ 186 (381)
.+-+|.-.|+..|.++|+ +...-+-..+|| ++|-| | ..-|+..++++|+
T Consensus 220 ~~~~~hGGDl~Glt~kLD-Yi~~LGv~aiWitP~~eqi~g~v~~~~~g~~~~YsYHGYw~~Df~kIDP~fGT~eDfk~LV 298 (683)
T PRK09505 220 EIGTFHGGDLRGLTEKLD-YLQQLGVNALWISSPLEQIHGWVGGGTKGDFPHYAYHGYYTLDWTKLDANMGTEADLRTLV 298 (683)
T ss_pred CCCCCCCCCHHHHHHHHH-HHHHCCCCEEEECCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHH
T ss_conf 667445856787998778-8987399759948405314554577767887777766654246433486679999999999
Q ss_pred HHHHHCCEEEEECCC
Q ss_conf 986313608986131
Q gi|254780486|r 187 KIANDYDGFIVVDEA 201 (381)
Q Consensus 187 ~l~~~y~~~LivDEa 201 (381)
+-|++.|..+|+|=+
T Consensus 299 deAH~RGIKVIlDvV 313 (683)
T PRK09505 299 DEAHQRGIRILFDVV 313 (683)
T ss_pred HHHHHCCCEEEEEEC
T ss_conf 999987998999860
No 450
>pfam06877 DUF1260 Protein of unknown function (DUF1260). This family consists of several hypothetical bacterial proteins of around 120 residues in length. The function of this family is unknown.
Probab=39.62 E-value=29 Score=15.56 Aligned_cols=87 Identities=13% Similarity=0.109 Sum_probs=58.9
Q ss_pred HHHHHHHHHCCCCCCCCCCEEE-EEECCHHHHHHHHHHHHHCCEEEEEECCCCCCCCCC--EEEEECCCCCCHHHHHHHH
Q ss_conf 9999987641797899897289-995897999999999997791898622888888870--3999628789999999999
Q gi|254780486|r 293 INITDKIANKKIGFSSQSHIQS-IVIGDNKSCLNIAKNLQKKGFDIRAIRPPTVPINTA--RLRISITLNVDEPTIVKLF 369 (381)
Q Consensus 293 ~~~~~~~~~~~~g~~~~s~I~~-v~~gd~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~--rlRi~v~a~~t~edi~~~~ 369 (381)
.+.+.++...+..++..-+|-. +.+.+...+..++..+.+.|+-|....+.- ..+.. .++++..-..+.+.|+...
T Consensus 6 ~~vl~~L~e~G~dl~~~~~Ieh~~~f~~~~~~e~~a~~~~~~gy~v~~~~~~~-ed~~~~~~~~~~~~~~~~~~~I~~~~ 84 (103)
T pfam06877 6 GEVLAALLEDGDDLSAPYEIEHHFYFEDEDDLEKAAEEAFKLGYEVEDAEELE-EDGDGVWCLDVSREMTLDYEDIDAQE 84 (103)
T ss_pred HHHHHHHHHCCCCCCCCEEEEEEEEECCHHHHHHHHHHHHHCCCEEEECCCCC-CCCCCEEEEEEEEECCCCHHHHHHHH
T ss_conf 99999999759986788777799980999999999999997698366644146-68984189999995568989999999
Q ss_pred HHHHHHHHHHC
Q ss_conf 99999988738
Q gi|254780486|r 370 DILPQIISEGN 380 (381)
Q Consensus 370 ~~l~~v~~E~~ 380 (381)
..|.++..+.+
T Consensus 85 ~~l~~lA~~~~ 95 (103)
T pfam06877 85 EELEALAEKFG 95 (103)
T ss_pred HHHHHHHHHHC
T ss_conf 99999999939
No 451
>KOG0922 consensus
Probab=39.07 E-value=17 Score=16.98 Aligned_cols=25 Identities=16% Similarity=0.228 Sum_probs=13.3
Q ss_pred CCCHHHHHHHHHHCCCCCCCCHHHH
Q ss_conf 6602456556663168971004542
Q gi|254780486|r 98 SGYAANMAILSTLPQATDLIVYDKL 122 (381)
Q Consensus 98 sG~~An~~~i~~l~~~~d~ii~D~~ 122 (381)
-|..-+.....-+..+.++|+.|+-
T Consensus 148 DG~LLRE~l~Dp~LskYsvIIlDEA 172 (674)
T KOG0922 148 DGMLLREILKDPLLSKYSVIILDEA 172 (674)
T ss_pred CHHHHHHHHCCCCCCCCCEEEEECH
T ss_conf 3599998850876454448998322
No 452
>smart00642 Aamy Alpha-amylase domain.
Probab=38.73 E-value=30 Score=15.48 Aligned_cols=26 Identities=19% Similarity=0.220 Sum_probs=23.4
Q ss_pred CCCHHHHHHHHHHHHHCCEEEEECCC
Q ss_conf 66134689999986313608986131
Q gi|254780486|r 176 DGDKAPLDDLVKIANDYDGFIVVDEA 201 (381)
Q Consensus 176 ~G~~apL~~i~~l~~~y~~~LivDEa 201 (381)
-|+..+++++++-|++.|..+++|-+
T Consensus 66 ~Gt~~d~~~lv~~~h~~gi~vilD~V 91 (166)
T smart00642 66 FGTMEDFKELVDAAHARGIKVILDVV 91 (166)
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEC
T ss_conf 69999999999999988998999889
No 453
>TIGR01366 serC_3 phosphoserine aminotransferase, putative; InterPro: IPR006272 These sequences represent a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria. ; GO: 0009058 biosynthetic process.
Probab=38.34 E-value=30 Score=15.44 Aligned_cols=61 Identities=18% Similarity=0.307 Sum_probs=48.8
Q ss_pred EEEECCHHHHHHHHHHHHHCCEEE-EEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999589799999999999779189-86228888888703999628789999999999999999887
Q gi|254780486|r 314 SIVIGDNKSCLNIAKNLQKKGFDI-RAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 314 ~v~~gd~~~a~~~~~~L~~~Gi~v-~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E 378 (381)
.|-+.|.-.+..+++-|+..||.= -|.+ ..|+..||+.+......+|++.+.++++-|++.
T Consensus 300 tidf~d~~da~~~ak~lranGi~dtePyr----klGrnqlr~~mfPa~~~~dv~~lt~~~d~~~~~ 361 (362)
T TIGR01366 300 TIDFSDDIDAAVVAKILRANGIVDTEPYR----KLGRNQLRVAMFPAIDPADVEALTECVDFVVEK 361 (362)
T ss_pred EEECCCCCCHHHHHHHHHHCCCCCCCCHH----HHCCCCEEEEECCCCCHHHHHHHHHHHHHHHCC
T ss_conf 64024440078999998745721365012----414100124430565867899999888888616
No 454
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=38.33 E-value=30 Score=15.44 Aligned_cols=30 Identities=20% Similarity=0.227 Sum_probs=17.5
Q ss_pred CCCHHHHHHHHHHHHHHCCCHHHHHHHHHH
Q ss_conf 750257898878988627102247899999
Q gi|254780486|r 265 SPILAVVACEALKLIKRKPALHKSLLQLIN 294 (381)
Q Consensus 265 ~P~~~aaa~aal~~l~~~~~~~~~l~~~~~ 294 (381)
+|....+...++.-+-+++++++++.++..
T Consensus 319 ~p~d~~~la~~i~~ll~d~~~~~~~~~~~~ 348 (365)
T cd03809 319 DPLDPEALAAAIERLLEDPALREELRERGL 348 (365)
T ss_pred CCCCHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_conf 999999999999999879999999999999
No 455
>COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases [Defense mechanisms]
Probab=38.07 E-value=25 Score=15.94 Aligned_cols=59 Identities=20% Similarity=0.354 Sum_probs=29.2
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHH-HHHHHHCCEEEEECCCCCCCCCCCCC
Q ss_conf 56881478997643100024786079714621576613468999-99863136089861311222347776
Q gi|254780486|r 142 PHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDL-VKIANDYDGFIVVDEAHATGVCGPLG 211 (381)
Q Consensus 142 ~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i-~~l~~~y~~~LivDEah~~Gv~G~~G 211 (381)
+-.+.+.|.+.|+.. ..+ +|+| .|--.. . .+++. .....+-++++|+||||.. -+|..+
T Consensus 335 ~~~s~~~Lk~~l~~~-----~~~-ii~T-TIQKf~-~--~~~~~~~~~~~~~~ivvI~DEaHRS-Q~G~~~ 394 (962)
T COG0610 335 KAESTSELKELLEDG-----KGK-IIVT-TIQKFN-K--AVKEDELELLKRKNVVVIIDEAHRS-QYGELA 394 (962)
T ss_pred CCCCHHHHHHHHHCC-----CCC-EEEE-EECCCC-H--HHHCCCCCCCCCCCEEEEEECCCCC-CCHHHH
T ss_conf 445799999998658-----984-8999-710264-3--3333320004787679998640103-560789
No 456
>TIGR02493 PFLA pyruvate formate-lyase 1-activating enzyme; InterPro: IPR012838 Members of this family are iron-sulphur proteins with a radical-SAM domain. A single glycine residue in 2.3.1.54 from EC, formate C-acetyltransferase (formate-pyruvate lyase), is oxidized to the corresponding radical by transfer of a proton from its CH2 to AdoMet with concomitant cleavage of the latter. The reaction requires Fe2+. The first stage is reduction of the AdoMet to give methionine and the 5'-deoxyadenosin-5-yl radical, which then abstracts a hydrogen radical from the glycine residue .; GO: 0043365 [formate-C-acetyltransferase]-activating enzyme activity.
Probab=37.96 E-value=31 Score=15.40 Aligned_cols=123 Identities=14% Similarity=0.132 Sum_probs=65.9
Q ss_pred EEEEECCCCCCC-------CCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHH----------HHHHHHH
Q ss_conf 267524510010-------00012110000135775025789887898862710224789999----------9999876
Q gi|254780486|r 238 GALVGSNKIIYD-------YLINYAKPFIYTTSPSPILAVVACEALKLIKRKPALHKSLLQLI----------NITDKIA 300 (381)
Q Consensus 238 GG~i~~~~~ii~-------~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~~~~~~l~~~~----------~~~~~~~ 300 (381)
||......++++ |+...+++.++|++=|-.+......-+...+++..++..|...- +..+++.
T Consensus 43 ~G~~~t~~el~~e~~~yk~f~~~sGGGvT~SGGEPllQ~~F~~~~f~~cK~~~GiHTclDT~GGCftf~~~~~~~~~~lL 122 (243)
T TIGR02493 43 GGTEVTVEELIKEVKSYKDFFKASGGGVTVSGGEPLLQPEFVLELFKACKKELGIHTCLDTSGGCFTFLGGFTEAADELL 122 (243)
T ss_pred CCCEECHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCHHHHHCCHHHHHHHHH
T ss_conf 78120789999999989988720799589868950201699999999999856983887448834334121248999751
Q ss_pred H----CCCCC---CCCCCEEEEEEC-CHHHHHHHHHHHHHCC--EEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHH
Q ss_conf 4----17978---998972899958-9799999999999779--189862288888887039996287899999999999
Q gi|254780486|r 301 N----KKIGF---SSQSHIQSIVIG-DNKSCLNIAKNLQKKG--FDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFD 370 (381)
Q Consensus 301 ~----~~~g~---~~~s~I~~v~~g-d~~~a~~~~~~L~~~G--i~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~ 370 (381)
. --+.+ +..-+ ..+.=. +.+++.++++.|.++| ++++.| +.|+.+=++|||+.+.+
T Consensus 123 e~TDLvLLDiK~~~~~~y-~~LTg~~~~~ptl~Fa~~L~~~~kP~WiRYV-------------lVPGyTD~~eDi~~l~~ 188 (243)
T TIGR02493 123 EVTDLVLLDIKHIDPEKY-KKLTGVKSLEPTLEFAKYLAKRNKPIWIRYV-------------LVPGYTDSEEDIEALAE 188 (243)
T ss_pred HCCCEEEEECCCCCHHHC-CCCCCCCCCHHHHHHHHHHHHCCCCEEEEEE-------------ECCCCCCCHHHHHHHHH
T ss_conf 005878862343681240-0014567752458999999965898899998-------------65887799899999999
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254780486|r 371 ILPQ 374 (381)
Q Consensus 371 ~l~~ 374 (381)
.+++
T Consensus 189 fv~~ 192 (243)
T TIGR02493 189 FVKT 192 (243)
T ss_pred HHHH
T ss_conf 9974
No 457
>PRK06965 acetolactate synthase 3 catalytic subunit; Validated
Probab=37.94 E-value=31 Score=15.40 Aligned_cols=79 Identities=10% Similarity=0.133 Sum_probs=39.6
Q ss_pred CCHHHHHHHHHHHHHCCCCCCCEEEEC-CCCCCCCCHHHHHHHHHHHHHCCEEE--------EECCCCC--CCCCCCCCC
Q ss_conf 881478997643100024786079714-62157661346899999863136089--------8613112--223477764
Q gi|254780486|r 144 NNINSFAENINKWRKSGGKGFPWIVVE-SIYSMDGDKAPLDDLVKIANDYDGFI--------VVDEAHA--TGVCGPLGK 212 (381)
Q Consensus 144 nD~~~Le~~l~~~~~~~~~~~~~vv~e-gv~Sm~G~~apL~~i~~l~~~y~~~L--------ivDEah~--~Gv~G~~G~ 212 (381)
.+.+.+++.++....+ .+++|++. |+-. .+ -.+++.+|+++.|+-+ ++||.|- +|++|..|.
T Consensus 206 ~~~~~i~~a~~lL~~A---krPvIl~G~g~~~-~~---a~~~l~~lae~l~iPV~tt~~gkg~~~e~hpl~~G~~G~~g~ 278 (587)
T PRK06965 206 GHSGQIRKAVSLLLSA---KRPYIYTGGGVIL-AN---ASRELRQLADLLGYPVTNTLMGLGAYPASDKKFLGMLGMHGT 278 (587)
T ss_pred CCHHHHHHHHHHHHHC---CCCEEEECCCCCH-HH---HHHHHHHHHHHHCCCEEHHHCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 8999999999999856---8988970788204-34---899999999997888062204577778877433676767687
Q ss_pred EEE-EEHHCCCCCCCCCC
Q ss_conf 011-00001346521001
Q gi|254780486|r 213 GLT-HIIEERNNVIVMHS 229 (381)
Q Consensus 213 G~~-~~~~~~~~~iv~~T 229 (381)
-.. +.+...|-+|.+|+
T Consensus 279 ~~a~~~l~~aDliL~lG~ 296 (587)
T PRK06965 279 YEANMAMQHCDVLIAIGA 296 (587)
T ss_pred HHHHHHHHCCCEEEECCC
T ss_conf 999999851887875464
No 458
>PRK00725 glgC glucose-1-phosphate adenylyltransferase; Provisional
Probab=37.39 E-value=31 Score=15.35 Aligned_cols=102 Identities=21% Similarity=0.237 Sum_probs=51.0
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCEEE-ECCCCCCCCCHHHHHHHHHHHHHCC--EEEEE-----CCCCCCCCC--CCCCC
Q ss_conf 68814789976431000247860797-1462157661346899999863136--08986-----131122234--77764
Q gi|254780486|r 143 HNNINSFAENINKWRKSGGKGFPWIV-VESIYSMDGDKAPLDDLVKIANDYD--GFIVV-----DEAHATGVC--GPLGK 212 (381)
Q Consensus 143 HnD~~~Le~~l~~~~~~~~~~~~~vv-~egv~Sm~G~~apL~~i~~l~~~y~--~~Liv-----DEah~~Gv~--G~~G~ 212 (381)
..+.+++.+.+.-.++...+ .++|+ .|=||.|| +.++.+--++.+ +.+.. +|+..+|++ -++|+
T Consensus 115 ~Gtadav~~n~~~l~~~~~e-yvvI~~gD~I~~~D-----~~~~l~~H~~~gAdiTi~~~~v~~~~~~~fGv~~~D~~gr 188 (431)
T PRK00725 115 RGTADAVYQNLDIIRRYKAE-YVVILAGDHIYKMD-----YSRMLIDHVEKGADCTVGCLEVPREEASAFGVMAVDENDK 188 (431)
T ss_pred CCCHHHHHHHHHHHHHCCCC-EEEEECCCEEECCC-----HHHHHHHHHHCCCCEEEEEEECCHHHCCCCCEEEECCCCC
T ss_conf 68589999999999756998-79994598898179-----9999999987799879999984878855477499999998
Q ss_pred EEEEEHHCCCCC--CCCCCCCCCCCCEEEEEECCCCCCCCCC
Q ss_conf 011000013465--2100134656530267524510010000
Q gi|254780486|r 213 GLTHIIEERNNV--IVMHSCSKALGSSGALVGSNKIIYDYLI 252 (381)
Q Consensus 213 G~~~~~~~~~~~--iv~~TlsKa~g~~GG~i~~~~~ii~~l~ 252 (381)
...+...|.. -+.+.-.+.+.++|=||.-.+.+++.|+
T Consensus 189 --V~~f~EKP~~p~~~~g~~~~~l~smGiYvf~~~~L~~~L~ 228 (431)
T PRK00725 189 --IIAFVEKPADPPAMPGDPDKSLASMGIYVFDADYLYELLE 228 (431)
T ss_pred --EEEEEECCCCCCCCCCCCCCCEECCEEEEECHHHHHHHHH
T ss_conf --9999933788434689755330001589985999999998
No 459
>PRK13342 recombination factor protein RarA; Reviewed
Probab=37.32 E-value=31 Score=15.34 Aligned_cols=78 Identities=12% Similarity=0.081 Sum_probs=43.1
Q ss_pred CCCCCCCHHHH--CCHHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCC-CCCCCEEEECCC-----CCCCCCHHHHH
Q ss_conf 68971004542--02677526664087640305688147899764310002-478607971462-----15766134689
Q gi|254780486|r 112 QATDLIVYDKL--VHASIREGINSGKAQAIAIPHNNINSFAENINKWRKSG-GKGFPWIVVESI-----YSMDGDKAPLD 183 (381)
Q Consensus 112 ~~~d~ii~D~~--~HaSi~~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~-~~~~~~vv~egv-----~Sm~G~~apL~ 183 (381)
..+.++++-+- |..--+..+-+|+++++.|+..+.++++..|++..... .....+.+.|.. ..-+||.=.+=
T Consensus 117 E~g~iiLIgATTENP~f~in~aLlSRc~vf~l~~L~~~di~~iL~ral~~e~~~~~~i~i~~~al~~i~~~s~GDaR~aL 196 (417)
T PRK13342 117 EDGTITLIGATTENPSFEVNPALLSRAQVFELKPLSEEDLEQLLKRALEDERGLGRKLELDDEALDALARLADGDARRAL 196 (417)
T ss_pred HCCCEEEEEECCCCCHHHCCHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCHHHHH
T ss_conf 12656999741579225348989856570020589999999999999987743378877699999999981498599999
Q ss_pred HHHHHH
Q ss_conf 999986
Q gi|254780486|r 184 DLVKIA 189 (381)
Q Consensus 184 ~i~~l~ 189 (381)
-+.|++
T Consensus 197 N~LE~a 202 (417)
T PRK13342 197 NLLELA 202 (417)
T ss_pred HHHHHH
T ss_conf 999999
No 460
>smart00488 DEXDc2 DEAD-like helicases superfamily.
Probab=37.30 E-value=16 Score=17.20 Aligned_cols=22 Identities=0% Similarity=0.126 Sum_probs=14.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 8789999999999999999887
Q gi|254780486|r 357 TLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 357 ~a~~t~edi~~~~~~l~~v~~E 378 (381)
+...|..+++++...|++...+
T Consensus 257 S~~ls~~~l~~a~~~l~~y~~r 278 (289)
T smart00488 257 SSELSRRSLERAHKNIKKYFER 278 (289)
T ss_pred CCEECHHHHHHHHHHHHHHHHH
T ss_conf 8652899999999999999999
No 461
>smart00489 DEXDc3 DEAD-like helicases superfamily.
Probab=37.30 E-value=16 Score=17.20 Aligned_cols=22 Identities=0% Similarity=0.126 Sum_probs=14.5
Q ss_pred CCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 8789999999999999999887
Q gi|254780486|r 357 TLNVDEPTIVKLFDILPQIISE 378 (381)
Q Consensus 357 ~a~~t~edi~~~~~~l~~v~~E 378 (381)
+...|..+++++...|++...+
T Consensus 257 S~~ls~~~l~~a~~~l~~y~~r 278 (289)
T smart00489 257 SSELSRRSLERAHKNIKKYFER 278 (289)
T ss_pred CCEECHHHHHHHHHHHHHHHHH
T ss_conf 8652899999999999999999
No 462
>TIGR00789 flhB_rel FlhB domain protein; InterPro: IPR004683 This group describes a short protein (80-93 residues) homologous to the C-terminus of the flagellar biosynthetic protein FlhB. It is found so far only in species that also have FlhB. In a phylogenetic tree based on alignment of both this family and the homologous region of FlhB and its homologs, the members of this family form a monophyletic set..
Probab=37.04 E-value=23 Score=16.20 Aligned_cols=31 Identities=26% Similarity=0.423 Sum_probs=25.4
Q ss_pred CEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCC
Q ss_conf 0797146215766134689999986313608986131
Q gi|254780486|r 165 PWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEA 201 (381)
Q Consensus 165 ~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEa 201 (381)
+-|+.-|+ |.+| ++|.+++|+||.-|.=||-
T Consensus 18 P~V~AsG~----GevA--~~II~~AK~~gipi~ed~~ 48 (84)
T TIGR00789 18 PKVVASGV----GEVA--EKIIELAKKHGIPIKEDED 48 (84)
T ss_pred CEEEECCC----CHHH--HHHHHHHHHCCCCCCCCHH
T ss_conf 85774167----6578--8999999763899765828
No 463
>PRK00030 minC septum formation inhibitor; Provisional
Probab=36.43 E-value=32 Score=15.25 Aligned_cols=57 Identities=12% Similarity=0.229 Sum_probs=29.1
Q ss_pred CEEECCCCHHHHHHHHHHHHHCCCC---CCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEE
Q ss_conf 4030568814789976431000247---86079714621576613468999998631360898
Q gi|254780486|r 138 AIAIPHNNINSFAENINKWRKSGGK---GFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIV 197 (381)
Q Consensus 138 ~~~f~HnD~~~Le~~l~~~~~~~~~---~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~Li 197 (381)
+...+..|++.+++.|.+-....+. ..+ ||+| +-..+.. .++++|.+++++|+...+
T Consensus 19 ~l~L~t~dl~~i~~~L~~Ki~qaP~FF~~~P-VVID-ls~l~~~-iDl~~L~~lL~~~gl~pV 78 (292)
T PRK00030 19 RVVLHDADTTRLRAALDKRMADAGSFFENEP-VVID-ATRVDAP-VDWPALLQALADHNLPPI 78 (292)
T ss_pred EEEEECCCHHHHHHHHHHHHHCCCHHHCCCC-EEEE-CHHCCCC-CCHHHHHHHHHHCCCEEE
T ss_conf 9997059999999999998862950214896-8998-7022664-699999999998698899
No 464
>PRK04516 minC septum formation inhibitor; Reviewed
Probab=36.21 E-value=33 Score=15.23 Aligned_cols=13 Identities=23% Similarity=0.166 Sum_probs=4.7
Q ss_pred HHHHHHHHHHCCE
Q ss_conf 8999998631360
Q gi|254780486|r 182 LDDLVKIANDYDG 194 (381)
Q Consensus 182 L~~i~~l~~~y~~ 194 (381)
++.|.+++++||.
T Consensus 64 l~~L~~lL~~~gl 76 (235)
T PRK04516 64 LAALVSLFSRHGM 76 (235)
T ss_pred HHHHHHHHHHCCC
T ss_conf 9999999998899
No 465
>PHA00666 putative protease
Probab=36.18 E-value=26 Score=15.80 Aligned_cols=10 Identities=10% Similarity=0.278 Sum_probs=3.4
Q ss_pred HHHHHHHCCE
Q ss_conf 9999997791
Q gi|254780486|r 326 IAKNLQKKGF 335 (381)
Q Consensus 326 ~~~~L~~~Gi 335 (381)
+.+.|-|-++
T Consensus 204 iGkamsED~~ 213 (233)
T PHA00666 204 AGKAMSEDRL 213 (233)
T ss_pred HHHHHCCCCE
T ss_conf 9987522664
No 466
>pfam02603 Hpr_kinase_N HPr Serine kinase N terminus. This family represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phospho-relay system in control of carbon catabolic repression in bacteria. This kinase in unusual in that it recognizes the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains.
Probab=35.87 E-value=33 Score=15.20 Aligned_cols=50 Identities=16% Similarity=0.131 Sum_probs=30.6
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEECCC
Q ss_conf 68814789976431000247860797146215766134689999986313608986131
Q gi|254780486|r 143 HNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEA 201 (381)
Q Consensus 143 HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivDEa 201 (381)
..+.+..++.+++.-... ...+|++.| ..|-+++.++|++|++.|+.=.-
T Consensus 64 ~l~~e~r~~~l~~l~~~~--~P~iIvt~~-------~~~p~~l~~~a~~~~vPll~t~~ 113 (127)
T pfam02603 64 QLTEEERKERLEKLFSYD--TPCLIVTRG-------LEPPEELLEAAKKYGIPLLRSKL 113 (127)
T ss_pred HCCHHHHHHHHHHHHCCC--CCEEEEECC-------CCCCHHHHHHHHHHCCCEEECCC
T ss_conf 699999999999985759--988999799-------99999999999997995798288
No 467
>pfam01301 Glyco_hydro_35 Glycosyl hydrolases family 35.
Probab=35.85 E-value=33 Score=15.20 Aligned_cols=49 Identities=20% Similarity=0.331 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCCCCCC-CHHHHHHHHHHHHHCCEE
Q ss_conf 4789976431000247860797146215766-134689999986313608
Q gi|254780486|r 147 NSFAENINKWRKSGGKGFPWIVVESIYSMDG-DKAPLDDLVKIANDYDGF 195 (381)
Q Consensus 147 ~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G-~~apL~~i~~l~~~y~~~ 195 (381)
+.+-..++.+....+-..++|-+|-=|...| |..-+..+.++.+++++-
T Consensus 124 ~~l~~~~~~l~~~~GGPII~vQiENEYg~~~~d~~Y~~~l~~~~~~~g~~ 173 (317)
T pfam01301 124 TALVPKMKPLQATNGGPIILVQIENEYGSYGVDKAYLQALRKLYREWGAD 173 (317)
T ss_pred HHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf 99999988986407995899972100377744599999999999985575
No 468
>PRK07535 methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase; Validated
Probab=35.85 E-value=33 Score=15.19 Aligned_cols=48 Identities=19% Similarity=0.451 Sum_probs=31.5
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEE---ECC
Q ss_conf 6881478997643100024786079714621576613468999998631360898---613
Q gi|254780486|r 143 HNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIV---VDE 200 (381)
Q Consensus 143 HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~Li---vDE 200 (381)
--|++.+|.-|+.+. ++++| .|| .+.-..+.++..|+++||+.++ +||
T Consensus 76 S~~~~aiEaaLk~~~-----Gr~iI--NSi---s~e~er~~~i~pLakkyga~vI~L~~de 126 (268)
T PRK07535 76 SPNPEAIEAGLKVAK-----GRPLI--NSV---SAEEERLEAVLPLVKKYNAPVVALTMDD 126 (268)
T ss_pred CCCHHHHHHHHHHCC-----CCCEE--EEE---CCCHHHHHHHHHHHHHHCCEEEEEECCC
T ss_conf 898999999999779-----99726--600---3880569999999998499799994289
No 469
>PRK07414 cob(I)yrinic acid a,c-diamide adenosyltransferase; Validated
Probab=35.83 E-value=33 Score=15.19 Aligned_cols=14 Identities=36% Similarity=0.461 Sum_probs=7.7
Q ss_pred CCCCCCCHHHHCCH
Q ss_conf 68971004542026
Q gi|254780486|r 112 QATDLIVYDKLVHA 125 (381)
Q Consensus 112 ~~~d~ii~D~~~Ha 125 (381)
++.|+||.|+.+.|
T Consensus 114 g~~DlvVLDEi~~A 127 (178)
T PRK07414 114 GKYELVVLDELSLA 127 (178)
T ss_pred CCCCEEEECHHHHH
T ss_conf 89888997036899
No 470
>PTZ00293 thymidine kinase; Provisional
Probab=35.80 E-value=33 Score=15.19 Aligned_cols=12 Identities=25% Similarity=0.232 Sum_probs=5.8
Q ss_pred HHHHHCCEEEEE
Q ss_conf 999977918986
Q gi|254780486|r 328 KNLQKKGFDIRA 339 (381)
Q Consensus 328 ~~L~~~Gi~v~~ 339 (381)
.+-+++|+-+--
T Consensus 247 ~~~~~~~~~~~~ 258 (284)
T PTZ00293 247 SAGMKSGRDLDE 258 (284)
T ss_pred HHCCCCCCCHHH
T ss_conf 010357766342
No 471
>TIGR02402 trehalose_TreZ malto-oligosyltrehalose trehalohydrolase; InterPro: IPR012768 Members of this family are the trehalose biosynthetic enzyme malto-oligosyltrehalose trehalohydrolase, formally known as 4-alpha-D-{(1->4)-alpha-D-glucano}trehalose trehalohydrolase (3.2.1.141 from EC). It is the TreZ protein of the TreYZ pathway for trehalose biosynthesis, and alternative to the OtsAB system.; GO: 0004553 hydrolase activity hydrolyzing O-glycosyl compounds, 0005992 trehalose biosynthetic process.
Probab=35.67 E-value=33 Score=15.18 Aligned_cols=49 Identities=12% Similarity=0.192 Sum_probs=24.8
Q ss_pred HHHHHHHHHHCCC-EEEE-----CCCCE------EEECCC-CCCCCCCCCHHHHHHHHHHHHHHCCC
Q ss_conf 9999999997598-3999-----28976------898034-46566779889999999999863786
Q gi|254780486|r 9 YEERLQKIKSKGR-HRQL-----LRRQD------IWDFTS-HDYLALSSSTLLREKILSSLDSKIPI 62 (381)
Q Consensus 9 ~~~~l~~~~~~g~-~~~~-----~~~~~------~l~f~s-~dYLGl~~~p~v~~a~~~a~~~~~g~ 62 (381)
..+||+.|+.=|= .+++ ++|+. ++-|+- +.| --|+=-+++++++- ..|+
T Consensus 123 ai~rLpyL~~LGiTaiELMPva~FpG~RgWGYDGVl~yAp~~~Y----G~Pd~Lk~lvDaAH-~~GL 184 (564)
T TIGR02402 123 AIERLPYLADLGITAIELMPVAQFPGTRGWGYDGVLPYAPHEAY----GGPDDLKALVDAAH-GLGL 184 (564)
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCC----CCCHHHHHHHHHHH-HCCC
T ss_conf 98741687750788888734467732666823554445621778----78189999999998-5688
No 472
>PRK12485 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional
Probab=35.63 E-value=25 Score=15.95 Aligned_cols=34 Identities=26% Similarity=0.225 Sum_probs=24.9
Q ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHCCEEEE-ECC
Q ss_conf 79714621576613468999998631360898-613
Q gi|254780486|r 166 WIVVESIYSMDGDKAPLDDLVKIANDYDGFIV-VDE 200 (381)
Q Consensus 166 ~vv~egv~Sm~G~~apL~~i~~l~~~y~~~Li-vDE 200 (381)
-|+.|=+ .=||+++.++++.+.|++|+..++ ++|
T Consensus 160 ~vicEi~-~~DGtMaR~~~L~~FA~kH~Lki~tI~D 194 (369)
T PRK12485 160 SVIVEVM-NDDGTMARRPDLEVFAAKHGIKIGTIAD 194 (369)
T ss_pred EEEEEEE-CCCCCCCCHHHHHHHHHHCCCCEEEHHH
T ss_conf 7999986-5888570258999999973784889999
No 473
>COG1134 TagH ABC-type polysaccharide/polyol phosphate transport system, ATPase component [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=35.55 E-value=34 Score=15.16 Aligned_cols=19 Identities=32% Similarity=0.300 Sum_probs=11.9
Q ss_pred EEEEECCCCCCCCCCCCCCEE
Q ss_conf 089861311222347776401
Q gi|254780486|r 194 GFIVVDEAHATGVCGPLGKGL 214 (381)
Q Consensus 194 ~~LivDEah~~Gv~G~~G~G~ 214 (381)
+.+.--| .+|++|++|.|=
T Consensus 48 f~i~~Ge--~vGiiG~NGaGK 66 (249)
T COG1134 48 FEIYKGE--RVGIIGHNGAGK 66 (249)
T ss_pred EEEECCC--EEEEECCCCCCH
T ss_conf 8860798--998987899858
No 474
>COG1197 Mfd Transcription-repair coupling factor (superfamily II helicase) [DNA replication, recombination, and repair / Transcription]
Probab=35.46 E-value=34 Score=15.16 Aligned_cols=69 Identities=19% Similarity=0.368 Sum_probs=40.0
Q ss_pred CEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH--HHHHHH--HHHHCCE-----------------EE
Q ss_conf 40305688147899764310002478607971462157661346--899999--8631360-----------------89
Q gi|254780486|r 138 AIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP--LDDLVK--IANDYDG-----------------FI 196 (381)
Q Consensus 138 ~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap--L~~i~~--l~~~y~~-----------------~L 196 (381)
.+.|=||+++++++.-.+.+.--|..++.|. -|-+.+ |+++.. ...+|++ .+
T Consensus 805 QvfYv~NrV~~Ie~~~~~L~~LVPEarI~va-------HGQM~e~eLE~vM~~F~~g~~dVLv~TTIIEtGIDIPnANTi 877 (1139)
T COG1197 805 QVFYVHNRVESIEKKAERLRELVPEARIAVA-------HGQMRERELEEVMLDFYNGEYDVLVCTTIIETGIDIPNANTI 877 (1139)
T ss_pred EEEEEECCCCCHHHHHHHHHHHCCCEEEEEE-------ECCCCHHHHHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCEE
T ss_conf 7999943331299999999985984688885-------258888999999999972888889882343047677787558
Q ss_pred EECCCCCCCC------CCCCCCE
Q ss_conf 8613112223------4777640
Q gi|254780486|r 197 VVDEAHATGV------CGPLGKG 213 (381)
Q Consensus 197 ivDEah~~Gv------~G~~G~G 213 (381)
||+.|+-+|. .|+-||+
T Consensus 878 IIe~AD~fGLsQLyQLRGRVGRS 900 (1139)
T COG1197 878 IIERADKFGLAQLYQLRGRVGRS 900 (1139)
T ss_pred EEECCCCCCHHHHHHHCCCCCCC
T ss_conf 89654334578888751654776
No 475
>CHL00181 cbbX CbbX; Provisional
Probab=34.97 E-value=32 Score=15.32 Aligned_cols=27 Identities=26% Similarity=0.394 Sum_probs=17.2
Q ss_pred CCHHHHHHHHHHH-HHCCEEEEECCCCCCC
Q ss_conf 6134689999986-3136089861311222
Q gi|254780486|r 177 GDKAPLDDLVKIA-NDYDGFIVVDEAHATG 205 (381)
Q Consensus 177 G~~apL~~i~~l~-~~y~~~LivDEah~~G 205 (381)
|..++ +..++. +.-|.+|++||||++.
T Consensus 108 G~Ta~--kt~~~i~~a~GGVLfIDEAY~L~ 135 (287)
T CHL00181 108 GHTAP--KTKEVLKKAMGGVLFIDEAYYLY 135 (287)
T ss_pred CCCHH--HHHHHHHHCCCCEEEEECHHHHC
T ss_conf 52169--99999996459879982446535
No 476
>cd06068 H2MP_like-1 Putative [NiFe] hydrogenase-specific C-terminal protease. Sequence comparison shows similarity to hydrogenase specific C-terminal endopeptidases, also called Hydrogen Maturation Proteases (H2MP). Maturation of [FeNi] hydrogenases includes formation of the nickel metallocenter, proteolytic processing and assembly with other subunits. Hydrogenase maturation endopeptidases are responsible for the proteolytic processing, liberating a short C-terminal peptide by cleaving after a His or an Arg residue, e.g., HycI (E. coli) is involved in processing of HypE (the large subunit of hydrogenases 3). This cleavage is nickel dependent.
Probab=34.68 E-value=35 Score=15.08 Aligned_cols=95 Identities=20% Similarity=0.184 Sum_probs=45.3
Q ss_pred CCCCHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCEEEEEHHCCCCC---CCC----------CCCCCCCCCEEEEE
Q ss_conf 76613468999998631360898613112223477764011000013465---210----------01346565302675
Q gi|254780486|r 175 MDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGKGLTHIIEERNNV---IVM----------HSCSKALGSSGALV 241 (381)
Q Consensus 175 m~G~~apL~~i~~l~~~y~~~LivDEah~~Gv~G~~G~G~~~~~~~~~~~---iv~----------~TlsKa~g~~GG~i 241 (381)
+||....+.=+.++.+.|+.+++||-++. | ++= |....+...+-. -.+ -++.+.+| +.
T Consensus 35 ~d~Gt~g~~l~~~l~~~~d~vIlVDAv~~-g--~~P--Gti~~~~~~~~~~~~~~~s~H~~~~~~~L~~~~~l~---~~- 105 (144)
T cd06068 35 ADFGIRGIHLAYELLDGYDTLILVDAVPR-G--GEP--GTLYVIELEDVDAAPELLDAHGMNPDAVLALLRALG---GT- 105 (144)
T ss_pred EECCCCHHHHHHHHHHHCCEEEEEEEEEC-C--CCC--CEEEEEECCCCCCCCCCEECCCCCHHHHHHHHHHHC---CC-
T ss_conf 97898669999999851786999988605-8--999--879997332256522114157799999999999846---99-
Q ss_pred ECCCCCCCCCCCCCCCEECCCCCCCCHHHHHHHHHHHHHH
Q ss_conf 2451001000012110000135775025789887898862
Q gi|254780486|r 242 GSNKIIYDYLINYAKPFIYTTSPSPILAVVACEALKLIKR 281 (381)
Q Consensus 242 ~~~~~ii~~l~~~~~~~ifst~l~P~~~aaa~aal~~l~~ 281 (381)
.+++. .+---...+-++.+|||.+.+|.-++++++++
T Consensus 106 --p~~v~-vvgiep~~~~~g~~LS~~V~~av~~~v~~i~~ 142 (144)
T cd06068 106 --PPRVV-VVGCEPADVDEGIGLSEPVAAAVPEAVRLVRD 142 (144)
T ss_pred --CCEEE-EEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf --98499-99977722568999799999999999999997
No 477
>cd04736 MDH_FMN Mandelate dehydrogenase (MDH)-like FMN-binding domain. MDH is part of a widespread family of homologous FMN-dependent a-hydroxy acid oxidizing enzymes that oxidizes (S)-mandelate to phenylglyoxalate. MDH is an enzyme in the mandelate pathway that occurs in several strains of Pseudomonas which converts (R)-mandelate to benzoate. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate dehydrogenase (MDH), and long chain hydroxyacid oxidase (LCHAO).
Probab=34.60 E-value=30 Score=15.51 Aligned_cols=26 Identities=19% Similarity=0.285 Sum_probs=10.8
Q ss_pred CCCEECCCCCCCCHHHHHHHHHHHHHHC
Q ss_conf 1100001357750257898878988627
Q gi|254780486|r 255 AKPFIYTTSPSPILAVVACEALKLIKRK 282 (381)
Q Consensus 255 ~~~~ifst~l~P~~~aaa~aal~~l~~~ 282 (381)
+|||+|. +.-.-...+..++++++++
T Consensus 318 GRp~lyg--Laa~G~~GV~~~l~iL~~E 343 (361)
T cd04736 318 GRATLYG--LAARGEAGVSEVLRLLKEE 343 (361)
T ss_pred CHHHHHH--HHHCCHHHHHHHHHHHHHH
T ss_conf 7899998--7711099999999999999
No 478
>pfam05114 DUF692 Protein of unknown function (DUF692). This family consists of several uncharacterized bacterial proteins.
Probab=34.47 E-value=35 Score=15.06 Aligned_cols=142 Identities=18% Similarity=0.273 Sum_probs=67.8
Q ss_pred CEEEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC-CCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHH
Q ss_conf 76898034465667798899999999998637868872244-36885899999999840128885167416602456556
Q gi|254780486|r 29 QDIWDFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRL-LCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAIL 107 (381)
Q Consensus 29 ~~~l~f~s~dYLGl~~~p~v~~a~~~a~~~~~g~~~~~sr~-~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i 107 (381)
-+++-..+-||++-...+ .+..+++..+|++...|.-+ +.|..++-.+--++|+++...=...
T Consensus 26 vdf~Ev~~EN~~~~gG~~---~~~L~~i~e~yPv~~HGv~LSlGs~~~ld~~~L~~l~~l~~~~~~~------------- 89 (275)
T pfam05114 26 IDFVEVAPENWMGMGGRL---LAQLDRLRERLPVALHGLSLSLGGAAPLDAELLRALKELAERHDPP------------- 89 (275)
T ss_pred CCEEEECCCCCCCCCCCH---HHHHHHHHHHCCEECCCCCEECCCCCCCCHHHHHHHHHHHHHHCCC-------------
T ss_conf 987997743124778846---9999999972997603564025899987999999999999975877-------------
Q ss_pred HHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCC--CHHHHHHHHHHHHHCCCCCCCEEEECCC--C-CC-CCCHHH
Q ss_conf 6631689710045420267752666408764030568--8147899764310002478607971462--1-57-661346
Q gi|254780486|r 108 STLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHN--NINSFAENINKWRKSGGKGFPWIVVESI--Y-SM-DGDKAP 181 (381)
Q Consensus 108 ~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~Hn--D~~~Le~~l~~~~~~~~~~~~~vv~egv--~-Sm-~G~~ap 181 (381)
.++|.++= |-.+| .+. ...+.+.+ .++.+.+.+++....-++ -+++|-+ | ++ ++++.-
T Consensus 90 ---------~~SeHL~w-s~~~g-~l~--dLLPlP~T~eal~~v~~ri~~vQd~L~r---plllEN~S~Y~~~~~~~m~E 153 (275)
T pfam05114 90 ---------LVSEHLSY-CRDGG-HLY--DLLPLPFTEEAVDHVAERIRVAQDALER---PLAVENISYYLHLPDEEMNE 153 (275)
T ss_pred ---------EECCCEEE-EECCC-CCC--CCCCCCCCHHHHHHHHHHHHHHHHHHCC---CEEEECHHHHCCCCCCCCCH
T ss_conf ---------36163257-61698-435--5676567899999999999999998588---67983678853788788799
Q ss_pred HHHHHHHHHHCCEEEEECCCC
Q ss_conf 899999863136089861311
Q gi|254780486|r 182 LDDLVKIANDYDGFIVVDEAH 202 (381)
Q Consensus 182 L~~i~~l~~~y~~~LivDEah 202 (381)
..=+.+|+++.||.|++|=-.
T Consensus 154 ~eFl~~l~~rtgC~LLLDvnN 174 (275)
T pfam05114 154 VEFLNAVADEADCGLLLDVNN 174 (275)
T ss_pred HHHHHHHHHHCCCCEEEEECC
T ss_conf 999999998549718997232
No 479
>KOG1299 consensus
Probab=34.25 E-value=24 Score=16.10 Aligned_cols=23 Identities=22% Similarity=0.166 Sum_probs=11.2
Q ss_pred CCHHHHHHHHHHHHHCCCCCEEE
Q ss_conf 85899999999840128885167
Q gi|254780486|r 73 NYNQHLELEEEAADFFGFEKMLY 95 (381)
Q Consensus 73 ~~~~~~~lE~~lA~~~g~e~al~ 95 (381)
..+.-.++-++++...++|.+++
T Consensus 181 ~S~~~~~lAe~vs~~i~~E~~lF 203 (549)
T KOG1299 181 SSRACKRLAEEVSYRITKESTLF 203 (549)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHC
T ss_conf 78899999999999986000100
No 480
>COG2433 Uncharacterized conserved protein [Function unknown]
Probab=34.19 E-value=20 Score=16.57 Aligned_cols=23 Identities=26% Similarity=0.515 Sum_probs=12.7
Q ss_pred CHHHHHHHH-HHHHHCCEEEEECC
Q ss_conf 134689999-98631360898613
Q gi|254780486|r 178 DKAPLDDLV-KIANDYDGFIVVDE 200 (381)
Q Consensus 178 ~~apL~~i~-~l~~~y~~~LivDE 200 (381)
|++|.|+.+ .|+..+|+.|++-+
T Consensus 296 DVtp~P~~V~KiAasf~A~ly~P~ 319 (652)
T COG2433 296 DVTPAPETVKKIAASFNAVLYTPD 319 (652)
T ss_pred CCCCCCHHHHHHHHHCCCCCCCCC
T ss_conf 688980789999997398423785
No 481
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=33.84 E-value=36 Score=14.99 Aligned_cols=23 Identities=26% Similarity=0.462 Sum_probs=11.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 89999999999999999887387
Q gi|254780486|r 359 NVDEPTIVKLFDILPQIISEGNS 381 (381)
Q Consensus 359 ~~t~edi~~~~~~l~~v~~E~~s 381 (381)
....+||+++++.|.+.++.+||
T Consensus 1732 GLH~~Di~~Ll~~l~~Lvd~G~T 1754 (1809)
T PRK00635 1732 SLDNQKKSQLLEQLRTLVSLGHS 1754 (1809)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCE
T ss_conf 88999999999999999868997
No 482
>pfam07429 Fuc4NAc_transf 4-alpha-L-fucosyltransferase (Fuc4NAc transferase). This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (EC 2.4.1.-) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc.
Probab=32.83 E-value=34 Score=15.16 Aligned_cols=11 Identities=18% Similarity=0.582 Sum_probs=6.7
Q ss_pred HHHHHHHHHHH
Q ss_conf 78999999999
Q gi|254780486|r 6 MSFYEERLQKI 16 (381)
Q Consensus 6 ~~~~~~~l~~~ 16 (381)
|.||++.|-..
T Consensus 20 L~FFnd~L~~~ 30 (361)
T pfam07429 20 LRFFNDELAPE 30 (361)
T ss_pred HHHHHHHHHHH
T ss_conf 99988776000
No 483
>cd07371 2A5CPDO_AB The alpha and beta subunits of the Class III extradiol dioxygenase, 2-amino-5-chlorophenol 1,6-dioxygenase, which catalyzes the oxidization and subsequent ring-opening of 2-amino-5-chlorophenol. This subfamily contains both alpha and beta subunits of 2-amino-5-chlorophenol 1,6-dioxygenase (2A5CPDO), which catalyzes the oxidization and subsequent ring-opening of 2-amino-5-chlorophenol, an intermediate during p-chloronitrobenzene degradation. 2A5CPDO is a member of the class III extradiol dioxygenase family, a group of enzymes which use a non-heme Fe(II) to cleave aromatic rings between a hydroxylated carbon and an adjacent non-hydroxylated carbon. The active enzyme is probably a heterotetramer, composed of two alpha and two beta subunits. Alpha and beta subunits share significant sequence similarity and may have evolved by gene duplication.
Probab=32.55 E-value=37 Score=14.86 Aligned_cols=29 Identities=7% Similarity=-0.104 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHHCCCCCEEEEC-CCCHHHHH
Q ss_conf 89999999984012888516741-66024565
Q gi|254780486|r 75 NQHLELEEEAADFFGFEKMLYFG-SGYAANMA 105 (381)
Q Consensus 75 ~~~~~lE~~lA~~~g~e~al~~~-sG~~An~~ 105 (381)
+.++++-++|++. .+++++.- .=|..+..
T Consensus 26 ~a~~~~~~~i~~~--~PDtIVV~SpHw~~~~d 55 (268)
T cd07371 26 WAYERAGASLAAS--RPDVVLVYSTQWIAVLD 55 (268)
T ss_pred HHHHHHHHHHHHC--CCCEEEEECCCCCCCCC
T ss_conf 9999999999865--99989998798654157
No 484
>TIGR02735 purC_vibrio phosphoribosylaminoimidazole-succinocarboxamide synthase; InterPro: IPR014106 Members of this protein family appear to represent a novel form of phosphoribosylaminoimidazole-succinocarboxamide synthase (SAICAR synthetase), significantly different in sequence from (IPR001636 from INTERPRO), which is found in a broad range of bacteria and eukaryotes. Members of this family are found within the gammaproteobacteria in the genera Vibrio, Shewanella, and Colwellia, and also (reported as a fragment) in the primitive eukaryote Guillardia theta (Cryptomonas phi)..
Probab=32.36 E-value=23 Score=16.14 Aligned_cols=90 Identities=17% Similarity=0.152 Sum_probs=51.6
Q ss_pred HHHHHHHCCCCC------CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCH--HHHCC
Q ss_conf 999986378688------7224436885899999999840128885167416602456556663168971004--54202
Q gi|254780486|r 53 LSSLDSKIPIGS------GGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAANMAILSTLPQATDLIVY--DKLVH 124 (381)
Q Consensus 53 ~~a~~~~~g~~~------~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An~~~i~~l~~~~d~ii~--D~~~H 124 (381)
+||+-|+|=||+ .|-|-|||.. |=+-|++=-..+..|++||.=. -+--|+.++.-.|+=|. |-+.|
T Consensus 126 IEAI~RQYITGS~WRaYaKGER~FCG~~-----lP~~L~~~~~LpElLiTPS~KG-iL~G~~Gv~~~DDVNItR~dIE~~ 199 (365)
T TIGR02735 126 IEAICRQYITGSLWRAYAKGEREFCGID-----LPEGLEKDQRLPELLITPSTKG-ILEGIPGVPAIDDVNITRKDIERN 199 (365)
T ss_pred EEEEHHHHHHHHHHHHHCCCCCCCCCCC-----CCHHHHHHCCCCCEEECCCCCC-CCCCCCCCCCCCCCCCCHHHHHHH
T ss_conf 3000001232334542115664346775-----5212343056882676687621-015788864424444667889989
Q ss_pred HHHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHH
Q ss_conf 6775266640876403056881478997643100
Q gi|254780486|r 125 ASIREGINSGKAQAIAIPHNNINSFAENINKWRK 158 (381)
Q Consensus 125 aSi~~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~ 158 (381)
.+ +.-.=.-.|++|-|++|++--+
T Consensus 200 ~~----------~~~F~~p~DIdHYE~LL~~GF~ 223 (365)
T TIGR02735 200 YS----------AFNFEQPEDIDHYERLLREGFA 223 (365)
T ss_pred HH----------HHCCCCCCHHHHHHHHHHHHHH
T ss_conf 99----------7078986312689999862589
No 485
>TIGR02717 AcCoA-syn-alpha acetyl coenzyme A synthetase (ADP forming), alpha domain; InterPro: IPR014089 This group of ADP-dependent acetyl-CoA synthetases (ACS) act in the direction of acetate and ATP production in the organisms in which they have been characterised , , . In most species this protein is bifunctional, existing as fused alpha-beta domains. In Pyrococcus and related species, however, the domains exist as separate polypeptides. This entry represents the alpha (N-terminal) domain. In Pyrococcus and related species there appears to have been the development of a paralogous family such that four other proteins are close relatives. One of these (along with its beta-domain partner) was characterised as ACS-II showing specificity for phenylacetyl-CoA . This entry excludes non-ACS-I paralogs. .
Probab=32.15 E-value=31 Score=15.42 Aligned_cols=37 Identities=19% Similarity=0.222 Sum_probs=19.9
Q ss_pred CCCCCCCCCCCCCEECCCCCCCCHHHH-------HHHHHHHHHHCC
Q ss_conf 100100001211000013577502578-------988789886271
Q gi|254780486|r 245 KIIYDYLINYAKPFIYTTSPSPILAVV-------ACEALKLIKRKP 283 (381)
Q Consensus 245 ~~ii~~l~~~~~~~ifst~l~P~~~aa-------a~aal~~l~~~~ 283 (381)
.+.++.||+.-|++ ++.-+|.-+.+ -..+|+++.+++
T Consensus 331 ~~t~~~L~~~LP~~--as~~NPVD~~GsDA~~~~Y~~~l~~v~eD~ 374 (457)
T TIGR02717 331 EKTKEKLRNILPPE--ASIKNPVDVLGSDATAERYAKALKIVAEDE 374 (457)
T ss_pred HHHHHHHHHHCCCC--CCCCCCCEEEECCCCHHHHHHHHHHHHCCC
T ss_conf 89999999747611--477875125522789899999999983488
No 486
>TIGR02874 spore_ytfJ sporulation protein YtfJ; InterPro: IPR014229 Proteins in this entry, exemplified by YtfJ of Bacillus subtilis, are encoded by bacterial genomes if, and only if, the species is capable of endospore formation. YtfJ was confirmed in spores of B. subtilis; it appears to be expressed in the forespore under control of SigF ..
Probab=32.07 E-value=38 Score=14.81 Aligned_cols=44 Identities=16% Similarity=0.393 Sum_probs=21.2
Q ss_pred CCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf 79189862288888887039996287899999999999999998873
Q gi|254780486|r 333 KGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDILPQIISEG 379 (381)
Q Consensus 333 ~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l~~v~~E~ 379 (381)
.||-+.||.|=.|. ..-+|+- +.+++.--+|+++|..-++++++
T Consensus 81 aGVS~~PvAFLvig--~~~iRLL-~vd~~~H~~ek~iD~~Pql~e~~ 124 (132)
T TIGR02874 81 AGVSVKPVAFLVIG--SDQIRLL-PVDQNTHLYEKLIDLVPQLLEKI 124 (132)
T ss_pred CCEEECCEEEEEEC--CCCEEEE-EECCCCCHHHHHHHHHHHHHHHH
T ss_conf 87351315899877--8836875-30676550466651147899999
No 487
>TIGR03528 2_3_DAP_am_ly diaminopropionate ammonia-lyase. Members of this protein family are the homodimeric, pyridoxal phosphate enzyme diaminopropionate ammonia-lyase, which adds water to remove two amino groups, leaving pyruvate.
Probab=31.91 E-value=38 Score=14.80 Aligned_cols=73 Identities=15% Similarity=0.131 Sum_probs=40.9
Q ss_pred HHHHCCH-HHHHHHHHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEE
Q ss_conf 4542026-775266640876403056881478997643100024786079714621576613468999998631360898
Q gi|254780486|r 119 YDKLVHA-SIREGINSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIV 197 (381)
Q Consensus 119 ~D~~~Ha-Si~~g~~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~Li 197 (381)
.-.-||+ ++--++++-+.+.+.|-|.+... .+.+..+.-. -.+|++++-| |- -+..-.++++++|..|+
T Consensus 119 ATdGNHG~~VA~aA~~lG~ka~I~mp~~~~~--~k~~air~~G---AeVv~~~~~Y----Dd-av~~A~~~A~e~g~~lV 188 (396)
T TIGR03528 119 ATDGNHGRGVAWAANQLGQKSVVYMPKGSAQ--IRLENIRAEG---AECTITDLNY----DD-AVRLAWKMAQENGWVMV 188 (396)
T ss_pred CCCCHHHHHHHHHHHHCCCCEEEEECCCCCH--HHHHHHHHCC---CEEEEECCCH----HH-HHHHHHHHHHHCCCEEE
T ss_conf 0787189999999998599889991799999--9999999759---9899978977----99-99999999986598797
Q ss_pred ECCC
Q ss_conf 6131
Q gi|254780486|r 198 VDEA 201 (381)
Q Consensus 198 vDEa 201 (381)
-|-+
T Consensus 189 ~Dts 192 (396)
T TIGR03528 189 QDTA 192 (396)
T ss_pred ECCC
T ss_conf 0577
No 488
>pfam00837 T4_deiodinase Iodothyronine deiodinase. Iodothyronine deiodinase converts thyroxine (T4) to 3,5,3'-triiodothyronine (T3).
Probab=31.77 E-value=39 Score=14.78 Aligned_cols=41 Identities=24% Similarity=0.340 Sum_probs=22.9
Q ss_pred CCCEEEECCCCCCCCCHHHHHHHHHHHHHC----CE-EEEECCCCC
Q ss_conf 860797146215766134689999986313----60-898613112
Q gi|254780486|r 163 GFPWIVVESIYSMDGDKAPLDDLVKIANDY----DG-FIVVDEAHA 203 (381)
Q Consensus 163 ~~~~vv~egv~Sm~G~~apL~~i~~l~~~y----~~-~LivDEah~ 203 (381)
.+++|+.=|-++----+..|++..+|.++| ++ +++++|||.
T Consensus 102 ~RPLVlnFGScTCPpFm~~l~~F~rlv~~f~dvADFl~VYIeEAHp 147 (237)
T pfam00837 102 NRPLVLNFGSCTUPPFMARLDAFQRLVEDFCSTADFLIIYIEEAHP 147 (237)
T ss_pred CCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCC
T ss_conf 9875886267678558888999999999976033446665311367
No 489
>PRK09311 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional
Probab=31.64 E-value=30 Score=15.42 Aligned_cols=30 Identities=27% Similarity=0.370 Sum_probs=23.1
Q ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHCCEEE
Q ss_conf 7971462157661346899999863136089
Q gi|254780486|r 166 WIVVESIYSMDGDKAPLDDLVKIANDYDGFI 196 (381)
Q Consensus 166 ~vv~egv~Sm~G~~apL~~i~~l~~~y~~~L 196 (381)
-|+.|=+ .=||+++.++++.+.|++|+..+
T Consensus 161 ~VIcEIm-ndDGtMAR~~dL~~FA~kH~Lki 190 (400)
T PRK09311 161 GVICEIV-NDDGTMARLPELIEFADEHGLKI 190 (400)
T ss_pred EEEEEEE-CCCCCCCCHHHHHHHHHHCCCCE
T ss_conf 8999986-69985465799999998747777
No 490
>PRK09529 bifunctional acetyl-CoA decarbonylase/synthase complex subunit alpha/beta; Reviewed
Probab=31.47 E-value=39 Score=14.75 Aligned_cols=21 Identities=24% Similarity=0.170 Sum_probs=11.2
Q ss_pred HHHHHHHHHHH-CCEEEEECCC
Q ss_conf 68999998631-3608986131
Q gi|254780486|r 181 PLDDLVKIAND-YDGFIVVDEA 201 (381)
Q Consensus 181 pL~~i~~l~~~-y~~~LivDEa 201 (381)
|..++++-+-+ .|..+-|.|.
T Consensus 282 ~~d~iv~~alE~RgiKi~vt~i 303 (713)
T PRK09529 282 DYDKIVSKALEVRGIKVTVTEI 303 (713)
T ss_pred CHHHHHHHHHHHCCCEEEEEEC
T ss_conf 8899999888863846899966
No 491
>PRK11823 DNA repair protein RadA; Provisional
Probab=31.10 E-value=40 Score=14.71 Aligned_cols=107 Identities=17% Similarity=0.256 Sum_probs=58.0
Q ss_pred CCCCCCCCCCCCCC-----HHHHHHHHHHHHHCCCCCEEEECCCCHH-HHHHHHHHCCCCCCCCHHHHCCHHHHHHHHH-
Q ss_conf 86887224436885-----8999999998401288851674166024-5655666316897100454202677526664-
Q gi|254780486|r 61 PIGSGGSRLLCGNY-----NQHLELEEEAADFFGFEKMLYFGSGYAA-NMAILSTLPQATDLIVYDKLVHASIREGINS- 133 (381)
Q Consensus 61 g~~~~~sr~~~G~~-----~~~~~lE~~lA~~~g~e~al~~~sG~~A-n~~~i~~l~~~~d~ii~D~~~HaSi~~g~~l- 133 (381)
|+-+++.-+++|.+ .+..++-..+|+ + .-.+|-||=.. .|-.+. +-|+
T Consensus 86 GlV~GS~iLlgGePGIGKSTLlLQ~a~~la~--~--~~vLYvSGEES~~Qik~R---------------------A~RLg 140 (454)
T PRK11823 86 GLVPGSVVLIGGDPGIGKSTLLLQVAAALAA--G--GKVLYVSGEESLQQIKLR---------------------AERLG 140 (454)
T ss_pred CCCCCEEEEECCCCCCCHHHHHHHHHHHHHC--C--CCEEEECCCHHHHHHHHH---------------------HHHHC
T ss_conf 7206648995079988899999999999855--9--957998150157899999---------------------99758
Q ss_pred -CCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC--------CCCHHHHH----HHHHHHHHCCEEEEE
Q ss_conf -087640305688147899764310002478607971462157--------66134689----999986313608986
Q gi|254780486|r 134 -GKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSM--------DGDKAPLD----DLVKIANDYDGFIVV 198 (381)
Q Consensus 134 -s~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm--------~G~~apL~----~i~~l~~~y~~~Liv 198 (381)
...+...+..+|+++....+++.+ + .++++|+|.-| -|++.-++ ++.++||+.|..+++
T Consensus 141 ~~~~~l~l~~et~l~~Il~~i~~~~---P---~~lIIDSIQT~~~~~~~s~pGsvsQVre~a~~L~~~AK~~~i~~~l 212 (454)
T PRK11823 141 LPSDNLYLLAETNLEDILATIEEEK---P---DLVVIDSIQTMYSPELESAPGSVSQVRECAAELTRLAKQSGIAVFL 212 (454)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHC---C---CEEEEECHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE
T ss_conf 8888737885368999999998609---9---8899943111541566778997899999999999999744982899
No 492
>cd01917 ACS_2 Acetyl-CoA synthase (ACS), also known as acetyl-CoA decarbonylase, is found in acetogenic and methanogenic organisms and is responsible for the synthesis and breakdown of acetyl-CoA. ACS forms a heterotetramer with carbon monoxide dehydrogenase (CODH) consisting of two ACS and two CODH subunits. CODH reduces carbon dioxide to carbon monoxide and ACS then synthesizes acetyl-CoA from carbon monoxide, CoA, and a methyl group donated by another protein (CoFeSP). ACS has three structural domains, an N-terminal rossman fold domain with a helical region at its N-terminus which interacts with CODH, and two alpha + beta fold domains. A Ni-Fe-S center referred to as the A-cluster is located in the C-terminal domain. A large cavity exists between the three domains which may bind CoA.
Probab=30.53 E-value=41 Score=14.65 Aligned_cols=31 Identities=13% Similarity=0.139 Sum_probs=17.2
Q ss_pred CCCCCHHHHHHHHHHHH---HCCCCCEEEEC-CCC
Q ss_conf 36885899999999840---12888516741-660
Q gi|254780486|r 70 LCGNYNQHLELEEEAAD---FFGFEKMLYFG-SGY 100 (381)
Q Consensus 70 ~~G~~~~~~~lE~~lA~---~~g~e~al~~~-sG~ 100 (381)
+.|+...+...|..+.+ =+|.+..+=|| ++|
T Consensus 3 ~~G~~~~~~~aE~~l~~Ai~~~G~d~~V~fP~TaY 37 (287)
T cd01917 3 YVGAITATSYAEILLNKAILEYGPDHPVGYPDTAY 37 (287)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
T ss_conf 13409999999999999999858998456998632
No 493
>cd01170 THZ_kinase 4-methyl-5-beta-hydroxyethylthiazole (Thz) kinase catalyzes the phosphorylation of the hydroxylgroup of Thz. A reaction that allows cells to recycle Thz into the thiamine biosynthesis pathway, as an alternative to its synthesis from cysteine, tyrosine and 1-deoxy-D-xylulose-5-phosphate.
Probab=30.32 E-value=41 Score=14.63 Aligned_cols=119 Identities=18% Similarity=0.213 Sum_probs=57.7
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCHHH--HHHH----HHHCCCCCCCCHHHHCC-HH-HHHH--HH-H
Q ss_conf 722443688589999999984012888516741660245--6556----66316897100454202-67-7526--66-4
Q gi|254780486|r 65 GGSRLLCGNYNQHLELEEEAADFFGFEKMLYFGSGYAAN--MAIL----STLPQATDLIVYDKLVH-AS-IREG--IN-S 133 (381)
Q Consensus 65 ~~sr~~~G~~~~~~~lE~~lA~~~g~e~al~~~sG~~An--~~~i----~~l~~~~d~ii~D~~~H-aS-i~~g--~~-l 133 (381)
++|+.++ +-.++..+|...-++++.|-|+..- +-.+ ..-.+.+-.|+.|.--- +| .+.. -+ +
T Consensus 31 GasPiMa-------~~~~E~~e~~~~a~aL~iNiGTl~~~~~~~m~~a~~~A~~~~~PvVLDPVgvGas~~R~~~~~~lL 103 (242)
T cd01170 31 GASPIMS-------DAPEEVEELAKIAGALVINIGTLTSEQIEAMLKAGKAANQLGKPVVLDPVGVGATSFRTEVAKELL 103 (242)
T ss_pred CCCHHHC-------CCHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHHHHHHHHHH
T ss_conf 9962325-------986889999985174488668899899999999999999739988974744686378999999999
Q ss_pred CCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH-HHHHHHHHHHCCEEEEECCC
Q ss_conf 087640305688147899764310002478607971462157661346-89999986313608986131
Q gi|254780486|r 134 GKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP-LDDLVKIANDYDGFIVVDEA 201 (381)
Q Consensus 134 s~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap-L~~i~~l~~~y~~~LivDEa 201 (381)
...+.-..|-| ...+..+.... --.-||-|.+++..+ ++...+++++|++.+++--.
T Consensus 104 ~~~~~tvIrGN-~sEI~aL~g~~----------~~~kGVDs~~~~~~~~~~~a~~lA~~~~~vVvvTG~ 161 (242)
T cd01170 104 AEGQPTVIRGN-ASEIAALAGLT----------GLGKGVDSSSSDEEDALELAKALARKYGAVVVVTGE 161 (242)
T ss_pred HHCCCCEEECC-HHHHHHHHCCC----------CCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEEEECC
T ss_conf 73898799537-99999995777----------898694489855578999999999982979999878
No 494
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=29.97 E-value=41 Score=14.59 Aligned_cols=114 Identities=20% Similarity=0.316 Sum_probs=63.6
Q ss_pred HHHHHHC--CCCCCCCCCCCCCC-----HHHHHHHHHHHHHCCCCCEEEECCCCHH-HHHHHHHHCCCCCCCCHHHHCCH
Q ss_conf 9998637--86887224436885-----8999999998401288851674166024-56556663168971004542026
Q gi|254780486|r 54 SSLDSKI--PIGSGGSRLLCGNY-----NQHLELEEEAADFFGFEKMLYFGSGYAA-NMAILSTLPQATDLIVYDKLVHA 125 (381)
Q Consensus 54 ~a~~~~~--g~~~~~sr~~~G~~-----~~~~~lE~~lA~~~g~e~al~~~sG~~A-n~~~i~~l~~~~d~ii~D~~~Ha 125 (381)
..++|-. |+-+++.-++.|.. .+..++-..+|+-. .+| |-||=.. .+-.+
T Consensus 80 ~EldRVLGGG~V~Gs~iLIgGdPGIGKSTLLLQva~~lA~~~---~vL-YVsGEES~~Qikl------------------ 137 (456)
T COG1066 80 EELDRVLGGGLVPGSVILIGGDPGIGKSTLLLQVAARLAKRG---KVL-YVSGEESLQQIKL------------------ 137 (456)
T ss_pred HHHHHHHCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHCC---CEE-EEECCCCHHHHHH------------------
T ss_conf 888765367723661799736898779899999999987059---579-9967767899999------------------
Q ss_pred HHHHHHHHC--CCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCC---CCCC-----CCHHHHH----HHHHHHHH
Q ss_conf 775266640--87640305688147899764310002478607971462---1576-----6134689----99998631
Q gi|254780486|r 126 SIREGINSG--KAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESI---YSMD-----GDKAPLD----DLVKIAND 191 (381)
Q Consensus 126 Si~~g~~ls--~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv---~Sm~-----G~~apL~----~i~~l~~~ 191 (381)
.+-||. ......++..|+++..+.+.+.+. .++|+|+| ||-+ |+++-.+ ++.+++|+
T Consensus 138 ---RA~RL~~~~~~l~l~aEt~~e~I~~~l~~~~p------~lvVIDSIQT~~s~~~~SapGsVsQVRe~t~~L~~~AK~ 208 (456)
T COG1066 138 ---RADRLGLPTNNLYLLAETNLEDIIAELEQEKP------DLVVIDSIQTLYSEEITSAPGSVSQVREVAAELMRLAKT 208 (456)
T ss_pred ---HHHHHCCCCCCEEEEHHCCHHHHHHHHHHCCC------CEEEEECCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHH
T ss_conf ---99982899645577411289999999985499------789996541230263357998589999999999999987
Q ss_pred CCEEEEE
Q ss_conf 3608986
Q gi|254780486|r 192 YDGFIVV 198 (381)
Q Consensus 192 y~~~Liv 198 (381)
+|..+++
T Consensus 209 ~~i~~fi 215 (456)
T COG1066 209 KNIAIFI 215 (456)
T ss_pred CCCEEEE
T ss_conf 5973999
No 495
>PRK09314 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional
Probab=29.94 E-value=40 Score=14.70 Aligned_cols=34 Identities=26% Similarity=0.329 Sum_probs=24.8
Q ss_pred EEEECCCCCCCCCHHHHHHHHHHHHHCCEEEE-ECC
Q ss_conf 79714621576613468999998631360898-613
Q gi|254780486|r 166 WIVVESIYSMDGDKAPLDDLVKIANDYDGFIV-VDE 200 (381)
Q Consensus 166 ~vv~egv~Sm~G~~apL~~i~~l~~~y~~~Li-vDE 200 (381)
-|+.|=+ .-||+++.++++.+.+++|+..++ ++|
T Consensus 159 ~vi~Ei~-~~dG~mar~~~l~~fa~~h~LkiiTIaD 193 (339)
T PRK09314 159 AVICEIV-KEDGTMARRDDLEIFAKKHNLKMIYVSD 193 (339)
T ss_pred EEEEEEE-CCCCCCCCHHHHHHHHHHCCCEEEEHHH
T ss_conf 9999996-5889683489999999984983999999
No 496
>PRK11630 hypothetical protein; Provisional
Probab=29.75 E-value=42 Score=14.57 Aligned_cols=35 Identities=9% Similarity=0.139 Sum_probs=17.5
Q ss_pred EEECCCCCCCCCHHH---HHHHHHHHHH---CCEEEEECCC
Q ss_conf 971462157661346---8999998631---3608986131
Q gi|254780486|r 167 IVVESIYSMDGDKAP---LDDLVKIAND---YDGFIVVDEA 201 (381)
Q Consensus 167 vv~egv~Sm~G~~ap---L~~i~~l~~~---y~~~LivDEa 201 (381)
+=||+||..-.+.-+ +++|.+++++ ..+.+++.+.
T Consensus 32 ~PTdTvYGlg~d~~n~~Av~ki~~iK~R~~~kpl~ll~~~~ 72 (206)
T PRK11630 32 YPTDSGYALGCKIEDKNAMERICRIRQLPDGHNFTLMCRDL 72 (206)
T ss_pred EECCCHHHHEECCCCHHHHHHHHHHHCCCCCCCCCEECCCH
T ss_conf 96775465225589989999999865899789862134899
No 497
>PRK09270 frcK putative fructose transport system kinase; Reviewed
Probab=29.36 E-value=42 Score=14.53 Aligned_cols=122 Identities=13% Similarity=0.056 Sum_probs=0.0
Q ss_pred CCCCHHHHHHHHHHHHHCCCCCEEEEC-CCCH---HHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHCCCCCEEECCCCH
Q ss_conf 688589999999984012888516741-6602---456556663168971004542026775266640876403056881
Q gi|254780486|r 71 CGNYNQHLELEEEAADFFGFEKMLYFG-SGYA---ANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHNNI 146 (381)
Q Consensus 71 ~G~~~~~~~lE~~lA~~~g~e~al~~~-sG~~---An~~~i~~l~~~~d~ii~D~~~HaSi~~g~~ls~a~~~~f~HnD~ 146 (381)
+|-+++-+.|-+.|.+......+.++| =||+ +.+.....+..+|-.--+|...=.+...-++ .+-..+.++-=|
T Consensus 45 SGKSTlA~~l~~~L~~~~~~~~~~~vpmDGFH~~~~~L~~~~~~~rkGaP~TFD~~~l~~~L~~Lk-~~~~~v~~P~yD- 122 (230)
T PRK09270 45 AGKSTLAETLWEALSQQGPELPAIQVPMDGFHLDNAVLDARGLRARKGAPETFDVAGLAELLRRLR-EGDCEVYWPVFD- 122 (230)
T ss_pred CCHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHH-CCCCCEEECCCC-
T ss_conf 899999999999986237998579973653345725554354743379910216988999999985-689717521343-
Q ss_pred HHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHCCEEEEEC
Q ss_conf 47899764310002478607971462157661346899999863136089861
Q gi|254780486|r 147 NSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVD 199 (381)
Q Consensus 147 ~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~~i~~l~~~y~~~LivD 199 (381)
-.+..-........+... +|++||.| -..+-+.-.+|++-++..++||
T Consensus 123 ~~~~d~~~~~~~i~~~~~-IVIvEGny----LLld~~~W~~l~~~~D~~ifvd 170 (230)
T PRK09270 123 RQLEDPVADAIVVGPTAR-LVIVEGNY----LLLDDEPWRRLAGFFDFSIFLD 170 (230)
T ss_pred CCCCCCCCCCEEECCCCC-EEEEECEE----EECCCCCHHHHHHHHCEEEEEE
T ss_conf 224577889536669986-89993447----6137832899998637679984
No 498
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=29.10 E-value=43 Score=14.50 Aligned_cols=26 Identities=27% Similarity=0.423 Sum_probs=0.0
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHCC
Q ss_conf 28789999999999999999887387
Q gi|254780486|r 356 ITLNVDEPTIVKLFDILPQIISEGNS 381 (381)
Q Consensus 356 v~a~~t~edi~~~~~~l~~v~~E~~s 381 (381)
||+..|+.|+++++.++++..+|+.|
T Consensus 167 PTaVLTP~E~~~lf~~l~~l~~~G~t 192 (501)
T COG3845 167 PTAVLTPQEADELFEILRRLAAEGKT 192 (501)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHCCCE
T ss_conf 75358989999999999999977997
No 499
>PRK07282 acetolactate synthase catalytic subunit; Reviewed
Probab=29.07 E-value=43 Score=14.50 Aligned_cols=77 Identities=22% Similarity=0.267 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHH--HHHHHHHHHHCCEEEE--------ECCCC--CCCCCCCCCC
Q ss_conf 8147899764310002478607971462157661346--8999998631360898--------61311--2223477764
Q gi|254780486|r 145 NINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAP--LDDLVKIANDYDGFIV--------VDEAH--ATGVCGPLGK 212 (381)
Q Consensus 145 D~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~ap--L~~i~~l~~~y~~~Li--------vDEah--~~Gv~G~~G~ 212 (381)
+-.++++.++...+. .+++|++-+ |-... .+++.+|+++.++-++ ++|-| .+|+.|-.|.
T Consensus 196 ~~~~i~~a~~~L~~A---krPvii~G~-----g~~~~~a~~~l~~lae~l~iPv~tt~~gkg~~~~~hpl~lG~~G~~~~ 267 (566)
T PRK07282 196 NDMQIKKILKQLSKA---KKPVILAGG-----GINYAEAAKELVEFAERYQIPVVTSLLGQGTIATSHPLFLGMGGMHGS 267 (566)
T ss_pred CHHHHHHHHHHHHCC---CCCEEEECC-----CCCHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCC
T ss_conf 999999999998647---995899888-----837245999999999986998995046688776667620255667788
Q ss_pred EEEEEHHCCCCC-CCCCC
Q ss_conf 011000013465-21001
Q gi|254780486|r 213 GLTHIIEERNNV-IVMHS 229 (381)
Q Consensus 213 G~~~~~~~~~~~-iv~~T 229 (381)
-..+..-...++ |.+||
T Consensus 268 ~~~~~~l~~aDlil~lG~ 285 (566)
T PRK07282 268 YAANIAMTEADFMINIGS 285 (566)
T ss_pred HHHHHHHCCCCEEEEECC
T ss_conf 899875415876999777
No 500
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=28.84 E-value=43 Score=14.47 Aligned_cols=62 Identities=19% Similarity=0.256 Sum_probs=0.0
Q ss_pred CCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCC---CCHHHHHHHHHHHHHCCEEEEECCCCCCC
Q ss_conf 6881478997643100024786079714621576---61346899999863136089861311222
Q gi|254780486|r 143 HNNINSFAENINKWRKSGGKGFPWIVVESIYSMD---GDKAPLDDLVKIANDYDGFIVVDEAHATG 205 (381)
Q Consensus 143 HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~---G~~apL~~i~~l~~~y~~~LivDEah~~G 205 (381)
+.+++++...+++.... +...++++=-|++..+ -.+.++..+..+.++.+.-+++|-.|+.|
T Consensus 132 ~~s~~~~~~a~eki~~~-Gn~~i~l~ERG~~gy~~~~rn~~d~~~ip~~~~~~~~PVi~D~SHs~G 196 (250)
T PRK13397 132 MATIEEYLGALSYLQDT-GKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTG 196 (250)
T ss_pred CCCHHHHHHHHHHHHHC-CCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_conf 79999999999999965-998289982898755563125700777799996159998992875478
Done!