HHsearch alignment for GI: 254780486 and conserved domain: pfam02347
>pfam02347 GDC-P Glycine cleavage system P-protein. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is:- Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2
Probab=98.73 E-value=1.5e-06 Score=60.96 Aligned_cols=305 Identities=14% Similarity=0.198 Sum_probs=152.6
Q ss_pred CCCCCCCCHHHHHHHHH-HHHH--HCCCCCC--CCCCCCCCCHHHHHHHHHHHHHCCCC--CEEEECCCCHHHHHHHHHH
Q ss_conf 65667798899999999-9986--3786887--22443688589999999984012888--5167416602456556663
Q gi|254780486|r 38 DYLALSSSTLLREKILS-SLDS--KIPIGSG--GSRLLCGNYNQHLELEEEAADFFGFE--KMLYFGSGYAANMAILSTL 110 (381)
Q Consensus 38 dYLGl~~~p~v~~a~~~-a~~~--~~g~~~~--~sr~~~G~~~~~~~lE~~lA~~~g~e--~al~~~sG~~An~~~i~~l 110 (381)
T Consensus 68 sfiG~G~y~h~vP~vi~~~i~~r~efyTaYTPYQpEiSQG~LqalfefQtmi~eLTGmdvaNASlyD~aTA~aEA~~ma~ 147 (429)
T pfam02347 68 SFIGMGYYDTIIPAVILRNILENPEWYTQYTPYQPEISQGRLEALLNFQTMVCDLTGLDVANASLLDEGTAAAEAMALAA 147 (429)
T ss_pred CCCCCCCCCCCCCCHHHHHHCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf 31578777976581564654047664303699981544379999999999999985887568766667889999999987
Q ss_pred --CC-CCCCCCHHHHCCHHHHHHH----HHCCCCCEEECCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCHHHHH
Q ss_conf --16-8971004542026775266----6408764030568814789976431000247860797146215766134689
Q gi|254780486|r 111 --PQ-ATDLIVYDKLVHASIREGI----NSGKAQAIAIPHNNINSFAENINKWRKSGGKGFPWIVVESIYSMDGDKAPLD 183 (381)
Q Consensus 111 --~~-~~d~ii~D~~~HaSi~~g~----~ls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~~vv~egv~Sm~G~~apL~ 183 (381)
T Consensus 148 r~~k~~~~~vlv~~~~hP~~~~Vl~T~~~~~~i~i~~~~~~~~~---~-------~~~~~~a~v~~q~P-n~~G~ied~~ 216 (429)
T pfam02347 148 RISKGKKKKFVVDKDCHPQTLDVLRTRAKGFGIEIVEVDLTEEG---F-------SDEGDVFGVLVQYP-NTEGRIEDYK 216 (429)
T ss_pred HHHCCCCCEEEEECCCCHHHHHHHHHHHHCCCCEEEEECCCCCC---C-------CCCCCEEEEEEECC-CCCCCEECCH
T ss_conf 65157887799828878318999997542279579996720014---5-------55547689999379-9983172349
Q ss_pred HHHHHHHHCCEEEEEC-CCCCCCCCCCCCCEEEEEHHCCCCCCCCCC---CCC--CCCC-EEEEEECCCCCCCCC-----
Q ss_conf 9999863136089861-311222347776401100001346521001---346--5653-026752451001000-----
Q gi|254780486|r 184 DLVKIANDYDGFIVVD-EAHATGVCGPLGKGLTHIIEERNNVIVMHS---CSK--ALGS-SGALVGSNKIIYDYL----- 251 (381)
Q Consensus 184 ~i~~l~~~y~~~LivD-Eah~~Gv~G~~G~G~~~~~~~~~~~iv~~T---lsK--a~g~-~GG~i~~~~~ii~~l----- 251 (381)
T Consensus 217 ~i~~~~h~~gal~iv~~dplsL~ll~~--------Pg~~GaDI~vG~~Q~lGipm~fGGP~~gf~a~~~~~~R~~PGRiv 288 (429)
T pfam02347 217 ELIEIAHQHGSLVVVAADLLALTILKP--------PGEFGADIVVGSAQRFGVPMGYGGPHAGFFAVKEELKRKMPGRIV 288 (429)
T ss_pred HHHHHHHHCCCEEEEEECHHHHCCCCC--------CCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCC
T ss_conf 999998645966999807799607689--------765663379725765788878898820015448889974997644
Q ss_pred ------------------------CCCCCCEECCCCCCCCHHHHHHHHHHHHHHCC----CHHHHHHHHHHHHHHHHHCC
Q ss_conf ------------------------01211000013577502578988789886271----02247899999999876417
Q gi|254780486|r 252 ------------------------INYAKPFIYTTSPSPILAVVACEALKLIKRKP----ALHKSLLQLINITDKIANKK 303 (381)
Q Consensus 252 ------------------------~~~~~~~ifst~l~P~~~aaa~aal~~l~~~~----~~~~~l~~~~~~~~~~~~~~ 303 (381)
T Consensus 289 G~t~D~~G~~~~~ltLqtREQHIrReKAtSNICTnq---aL~-A~~a~~Y~~~~Gp~GL~~iA~~~~~~A~yl~~~L~~~ 364 (429)
T pfam02347 289 GVSKDANGKRALRLALQTREQHIRRDKATSNICTAQ---ALL-ANMAAMYAVYHGPKGLKEIARRIHSLTLYLAKGLKKL 364 (429)
T ss_pred CCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCHH---HHH-HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf 677588998733654124343033444203465008---999-9999999998697889999999999999999999866
Q ss_pred CCC--CCCCCEEEEEEC-CHHHHHHHHHHHHHCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 978--998972899958-979999999999977918986228888888703999628789999999999999
Q gi|254780486|r 304 IGF--SSQSHIQSIVIG-DNKSCLNIAKNLQKKGFDIRAIRPPTVPINTARLRISITLNVDEPTIVKLFDIL 372 (381)
Q Consensus 304 ~g~--~~~s~I~~v~~g-d~~~a~~~~~~L~~~Gi~v~~i~~PtVp~~~~rlRi~v~a~~t~edi~~~~~~l 372 (381)
T Consensus 365 ~g~~~~~~~Ffd~v~~~~~~~~~~~l~~~~i~~G~~l---~~~~--~~--~~li~vtE~~T~edId~Lv~~f 429 (429)
T pfam02347 365 AGHELDHDHFFDTLKITVEDRAAEELLKRAEKGGINL---RYVD--LG--TVGIALDETTTKEDVDALLKVF 429 (429)
T ss_pred CCEECCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCE---EECC--CC--EEEEEECCCCCHHHHHHHHHHC
T ss_conf 9976679996215999628278999999999779973---6538--99--4999964799999999999759