RPSBLAST alignment for GI: 254780486 and conserved domain: TIGR00858
>gnl|CDD|129937 TIGR00858, bioF, 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model. Length = 360
Score = 300 bits (771), Expect = 3e-82
Identities = 129/332 (38%), Positives = 190/332 (57%), Gaps = 10/332 (3%)
Query: 33 DFTSHDYLALSSSTLLREKILSSLDSKIPIGSGGSRLLCGNYNQHLELEEEAADFFGFEK 92
+F+S+DYL L+S + + + GS SRL+ GN H ELEEE A++ G E
Sbjct: 20 NFSSNDYLGLASHPEVIQAAQQGA-EQYGAGSTASRLVSGNSPLHEELEEELAEWKGTEA 78
Query: 93 MLYFGSGYAANMAILSTLPQATDLIVYDKLVHASIREGINSGKAQAIAIPHNNINSFAEN 152
L F SGY AN+ ++S L DLI+ D L HAS+ +G A+ HN++
Sbjct: 79 ALLFSSGYLANVGVISALVGKGDLILSDALNHASLIDGCRLSGARVRRYRHNDVEHLERL 138
Query: 153 INKWRKSGGKGFPWIVVESIYSMDGDKAPLDDLVKIANDYDGFIVVDEAHATGVCGPLGK 212
+ K R K IV + ++SMDGD APL LV +A Y +++VD+AH TGV G G+
Sbjct: 139 LEKNRGERRK---LIVTDGVFSMDGDIAPLPQLVALAERYGAWLMVDDAHGTGVLGEDGR 195
Query: 213 G-LTHI-IEERNNVIVMHSCSKALGSSGALVGSNKIIYDYLINYAKPFIYTTSPSPILAV 270
G L H ++ I + + SKALGS GA V ++ + DYLIN A+ I++T+ P +A
Sbjct: 196 GTLEHFGLKPEPVDIQVGTLSKALGSYGAYVAGSQALIDYLINRARTLIFSTALPPAVAA 255
Query: 271 VACEALKLIKRKPALHKSLLQLINITDKIANKKIGFS---SQSHIQSIVIGDNKSCLNIA 327
A AL+LI+ +P + LL LI + +GF+ S + I ++IGDN S L +A
Sbjct: 256 AALAALELIQEEPWRREKLLALIARLRAGL-EALGFTLMPSCTPIVPVIIGDNASALALA 314
Query: 328 KNLQKKGFDIRAIRPPTVPINTARLRISITLN 359
+ LQ++G + AIRPPTVP T+RLR++++
Sbjct: 315 EELQQQGIFVGAIRPPTVPAGTSRLRLTLSAA 346