HHsearch alignment for GI: 254780487 and conserved domain: COG1797
>COG1797 CobB Cobyrinic acid a,c-diamide synthase [Coenzyme metabolism].
Probab=100.00 E-value=5e-31 Score=213.79 Aligned_cols=196 Identities=20% Similarity=0.235 Sum_probs=153.9
Q ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHCCCC--CCEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 329998358987479999999999840486--120138873806899999855787311443001451034788999850
Q gi|254780487|r 3 LRLVIVGTDTSVGKTIFASALVHALNAYYW--KPIQSGMYEETDSKTIHRIGRIPKSHIIPEKWKLRTPASPHLAAEIDG 80 (217)
Q Consensus 3 ~~i~I~GT~t~vGKT~vs~~L~~~l~~~~~--KPv~~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (217)
T Consensus 1 ~~vvIAg~~SG~GKTTvT~glm~aL~~rg~~VqpfKvG-PDYIDP~~H~~atG~~srNL--D~~mm~~------------ 65 (451)
T COG1797 1 PAVVIAGTSSGSGKTTVTLGLMRALRRRGLKVQPFKVG-PDYIDPGYHTAATGRPSRNL--DSWMMGE------------ 65 (451)
T ss_pred CCEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC-CCCCCCHHHHHHHCCCCCCC--CHHHCCH------------
T ss_conf 93599548888858999999999998668721665568-78638135667638856777--6544699------------
Q ss_pred CCCHHHHHHHHHHCCEEEEECCCCCCCCCC---CCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHC-CCEEEE
Q ss_conf 235078864223288799922765556676---7530899999747944897057765045799999999847-990799
Q gi|254780487|r 81 VIIDPATINPPDINDSIIIEGIGGLLVPLT---TEYLFIDLIERWQFPIILCARTSLGTINHSLLSLETLRNR-NINIIG 156 (217)
Q Consensus 81 ~~i~~~~~~~~~~~D~viIEGagg~~~~~~---~~~~~~dla~~l~~~vILV~~~~~g~i~~~~l~~~~~~~~-g~~i~G 156 (217)
T Consensus 66 ~~v~~~f~~~~~~adi~vIEGVMGLfDG~~~~~~~gSTA~lAk~l~~PVvLVid~~~~s~S~AAiv~G~~~fdp~v~iaG 145 (451)
T COG1797 66 EGVRALFARAAADADIAVIEGVMGLFDGRGSATDTGSTADLAKLLGAPVVLVVDASGLSRSVAAIVKGFKHFDPDVNIAG 145 (451)
T ss_pred HHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCEEE
T ss_conf 89999999862789879996123023688777677779999998599989999575225789999988986199882578
Q ss_pred EEECCCCCCCHHH----HHHHHCCCCEEEEECCCCCCCHH--------------------HHHHHHHHHHHHHHHHHHHH
Q ss_conf 9976977800599----99986199899994788888887--------------------99999997133999999999
Q gi|254780487|r 157 IAFIGDSMPKVEE----TIVKIGRIPHLGRLPKIDPIDPD--------------------VLHQKFQEHFTQSLLQKYFY 212 (217)
Q Consensus 157 iIlN~~~~~~~~~----~le~~~~ipvLG~iP~~~~~~~~--------------------~l~~~~~~~~~~~~l~~~~~ 212 (217)
T Consensus 146 VIlNrVgserH~~llr~Ale~~~gv~vlG~lpr~~~l~lp~RHLGLV~a~E~~~~~~~~~~~a~~v~~~vDld~l~~ia~ 225 (451)
T COG1797 146 VILNRVGSERHYELLRDALEEYTGVPVLGYLPRDDDLELPSRHLGLVPASERLELEAKLEALAEVVEKHVDLDALLEIAS 225 (451)
T ss_pred EEEECCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_conf 99724777889999998755327985798742785567854132653430344489999999999986078988999874
Q ss_pred H
Q ss_conf 8
Q gi|254780487|r 213 E 213 (217)
Q Consensus 213 ~ 213 (217)
T Consensus 226 ~ 226 (451)
T COG1797 226 S 226 (451)
T ss_pred C
T ss_conf 3