HHsearch alignment for GI: 254780487 and conserved domain: COG2403

Probab=97.88  E-value=3.4e-05  Score=51.98  Aligned_cols=96  Identities=15%  Similarity=0.147  Sum_probs=57.8

Q ss_pred             EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCC-------CCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHH
Q ss_conf             29998358987479999999999840486120138873-------80689999985578731144300145103478899
Q gi|254780487|r    4 RLVIVGTDTSVGKTIFASALVHALNAYYWKPIQSGMYE-------ETDSKTIHRIGRIPKSHIIPEKWKLRTPASPHLAA   76 (217)
Q Consensus         4 ~i~I~GT~t~vGKT~vs~~L~~~l~~~~~KPv~~G~~~-------~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (217)
T Consensus       128 viaV~atrtg~GKsaVS~~v~r~l~ergyrv~vVrhPmiy~~~~ieitve~~~k~edld~h-----------a~t~eere  196 (449)
T COG2403         128 VIAVTATRTGVGKSAVSRYVARLLRERGYRVCVVRHPMIYRGDRIEITVERLAKLEDLDRH-----------AATDEERE  196 (449)
T ss_pred             EEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEEECCEEECCCCCHHHHHHHHCHHHCCCC-----------CCCHHHHH
T ss_conf             5999972366556788899999998669823799557023377310018977377652642-----------25566688


Q ss_pred             HHH-----------HCCCHHHHHHHHHHCCEEEEECCCCCCCCCC
Q ss_conf             985-----------0235078864223288799922765556676
Q gi|254780487|r   77 EID-----------GVIIDPATINPPDINDSIIIEGIGGLLVPLT  110 (217)
Q Consensus        77 ~~~-----------~~~i~~~~~~~~~~~D~viIEGagg~~~~~~  110 (217)
T Consensus       197 eye~~I~tg~~vlAGvdy~~vlke~~~~aD~IlwdGgnndfPfvk  241 (449)
T COG2403         197 EYESYIPTGGGVLAGVDYGTVLKEGEKEADFILWDGGNNDFPFVK  241 (449)
T ss_pred             HHHHCCCCCCCEEEEEEHHHHHHHHHHHCCEEEEECCCCCCCCCC
T ss_conf             787436435534652048999987764155899948887788525