HHsearch alignment for GI: 254780487 and conserved domain: KOG0781
>KOG0781 consensus.
Probab=91.49 E-value=1.1 Score=23.83 Aligned_cols=168 Identities=19% Similarity=0.175 Sum_probs=80.2
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHCCCCC-------CEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 99983589874799999999998404861-------20138873806899999855787311443001451034788999
Q gi|254780487|r 5 LVIVGTDTSVGKTIFASALVHALNAYYWK-------PIQSGMYEETDSKTIHRIGRIPKSHIIPEKWKLRTPASPHLAAE 77 (217)
Q Consensus 5 i~I~GT~t~vGKT~vs~~L~~~l~~~~~K-------Pv~~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (217)
T Consensus 381 i~fvGVN-GVGKSTNLAKIayWLlqNkfrVlIAACDTFRsGAvE-QLrtHv~rl~~l~~~~v--~lf--ekGYgk-d~a~ 453 (587)
T KOG0781 381 ISFVGVN-GVGKSTNLAKIAYWLLQNKFRVLIAACDTFRSGAVE-QLRTHVERLSALHGTMV--ELF--EKGYGK-DAAG 453 (587)
T ss_pred EEEEEEC-CCCCCCHHHHHHHHHHHCCCEEEEEECCCHHHHHHH-HHHHHHHHHHHHCCCHH--HHH--HHHCCC-CHHH
T ss_conf 9998214-766513299999999857836999862431244789-99999999987455204--888--610477-8289
Q ss_pred HHHCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEE-EECCCCC--HHHHHHHHHHHHHHCC--C
Q ss_conf 850235078864223288799922765556676753089999974794489-7057765--0457999999998479--9
Q gi|254780487|r 78 IDGVIIDPATINPPDINDSIIIEGIGGLLVPLTTEYLFIDLIERWQFPIIL-CARTSLG--TINHSLLSLETLRNRN--I 152 (217)
Q Consensus 78 ~~~~~i~~~~~~~~~~~D~viIEGagg~~~~~~~~~~~~dla~~l~~~vIL-V~~~~~g--~i~~~~l~~~~~~~~g--~ 152 (217)
T Consensus 454 vak~AI---~~a~~~gfDvvLiDTAGRmhn~~~LM~~L~kl~~~n~pD~i~~VgEALVG~dsvdq~~~Fn~al~d~~~~r 530 (587)
T KOG0781 454 VAKEAI---QEARNQGFDVVLIDTAGRMHNNAPLMTSLAKLIKVNKPDLILFVGEALVGNDSVDQLKKFNRALADHSTPR 530 (587)
T ss_pred HHHHHH---HHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCCCCEEEEEHHHHHCCHHHHHHHHHHHHHHCCCCCC
T ss_conf 999999---99986698789983544334780678999999744798659985055527558999999999874489744
Q ss_pred EEEEEEECCCC--CCCHHHHH--HHHCCCCEEEE
Q ss_conf 07999976977--80059999--98619989999
Q gi|254780487|r 153 NIIGIAFIGDS--MPKVEETI--VKIGRIPHLGR 182 (217)
Q Consensus 153 ~i~GiIlN~~~--~~~~~~~l--e~~~~ipvLG~ 182 (217)
T Consensus 531 ~iDgilltK~DTvdd~vG~~v~Mvy~t~~PIlFv 564 (587)
T KOG0781 531 LIDGILLTKFDTVDDKVGAAVSMVYITGKPILFV 564 (587)
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHEECCCCEEEE
T ss_conf 2343788712506568887876420038976998