HHsearch alignment for GI: 254780487 and conserved domain: PRK01077
>PRK01077 cobyrinic acid a,c-diamide synthase; Validated.
Probab=100.00 E-value=2.3e-31 Score=215.89 Aligned_cols=196 Identities=19% Similarity=0.233 Sum_probs=144.2
Q ss_pred CC-CEEEEECCCCCCCHHHHHHHHHHHHHCCCCC--CEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf 98-3299983589874799999999998404861--20138873806899999855787311443001451034788999
Q gi|254780487|r 1 MK-LRLVIVGTDTSVGKTIFASALVHALNAYYWK--PIQSGMYEETDSKTIHRIGRIPKSHIIPEKWKLRTPASPHLAAE 77 (217)
Q Consensus 1 M~-~~i~I~GT~t~vGKT~vs~~L~~~l~~~~~K--Pv~~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (217)
T Consensus 1 m~~p~lmI~gt~S~~GKT~vt~gL~r~l~~rG~~VapFK~G-PDyIdp~~~~~a~g~~~~--nLD~~l~~~--------- 68 (451)
T PRK01077 1 MRMPALVIAAPASGSGKTTVTLGLMRALRRRGLRVQPFKVG-PDYIDPAFHAAATGRPSR--NLDSWMMGE--------- 68 (451)
T ss_pred CCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCC-CCCCCHHHHHHHHCCCCC--CCCHHHCCH---------
T ss_conf 99887999868999978999999999999687945753578-576298999999789753--588344899---------
Q ss_pred HHHCCCHHHHHHHHHHCCEEEEECCCCCCCCCCC---CCCHHHHHHHHCCCEEEEECCCC--CHHHHHHHHHHHHHHCCC
Q ss_conf 8502350788642232887999227655566767---53089999974794489705776--504579999999984799
Q gi|254780487|r 78 IDGVIIDPATINPPDINDSIIIEGIGGLLVPLTT---EYLFIDLIERWQFPIILCARTSL--GTINHSLLSLETLRNRNI 152 (217)
Q Consensus 78 ~~~~~i~~~~~~~~~~~D~viIEGagg~~~~~~~---~~~~~dla~~l~~~vILV~~~~~--g~i~~~~l~~~~~~~~g~ 152 (217)
T Consensus 69 ---~~v~~~~~~~~~~~D~~viEG~mGlyDG~~~~~~~gS~aeiA~~l~~PViLViD~~~~~~s~aa~v~G~~~~~-~~~ 144 (451)
T PRK01077 69 ---DLVRALFARAAGGADIAVIEGVMGLFDGAGGDPDKGSTADIARLLGAPVVLVVDASGMAQSAAALVLGFARFD-PDL 144 (451)
T ss_pred ---HHHHHHHHHHCCCCCEEEEEECHHCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHHHC-CCC
T ss_conf ---9999999975466888998501011345456777777899998709988999846620899999999999759-778
Q ss_pred EEEEEEECCCCCCCHHHH----HHHHCCCCEEEEECCCCCCCHHH--------------------HHHHHHHHHHHHHHH
Q ss_conf 079999769778005999----99861998999947888888879--------------------999999713399999
Q gi|254780487|r 153 NIIGIAFIGDSMPKVEET----IVKIGRIPHLGRLPKIDPIDPDV--------------------LHQKFQEHFTQSLLQ 208 (217)
Q Consensus 153 ~i~GiIlN~~~~~~~~~~----le~~~~ipvLG~iP~~~~~~~~~--------------------l~~~~~~~~~~~~l~ 208 (217)
T Consensus 145 ~I~GvIlNk~~g~~h~~ll~~~ie~-~gvpvlG~lP~~~~l~lpeRHLGLv~~~E~~~~~~~~~~~~~~~~~~id~~~l~ 223 (451)
T PRK01077 145 NIAGVILNRVGSERHYQLLREALEE-LGLPVLGALPRDAALALPERHLGLVQASEIADLEARLDALADLVEAHVDLDALL 223 (451)
T ss_pred CEEEEEEECCCCHHHHHHHHHHHHH-CCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHH
T ss_conf 7748996247876689999999986-399579861576334564212577670456668999999999998617999999
Q ss_pred HHHHH
Q ss_conf 99998
Q gi|254780487|r 209 KYFYE 213 (217)
Q Consensus 209 ~~~~~ 213 (217)
T Consensus 224 ~i~~~ 228 (451)
T PRK01077 224 ALARA 228 (451)
T ss_pred HHHHC
T ss_conf 98504