HHsearch alignment for GI: 254780487 and conserved domain: PRK06835
>PRK06835 DNA replication protein DnaC; Validated.
Probab=94.42 E-value=0.39 Score=26.55 Aligned_cols=111 Identities=18% Similarity=0.199 Sum_probs=55.3
Q ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 32999835898747999999999984048612013887380689999985578731144300145103478899985023
Q gi|254780487|r 3 LRLVIVGTDTSVGKTIFASALVHALNAYYWKPIQSGMYEETDSKTIHRIGRIPKSHIIPEKWKLRTPASPHLAAEIDGVI 82 (217)
Q Consensus 3 ~~i~I~GT~t~vGKT~vs~~L~~~l~~~~~KPv~~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (217)
T Consensus 184 ~nLlf~G~-~G~GKTfLa~~IA~ell~~g~sViy~----ta-~~L~~~l~~~~----------~~~~------------~ 235 (330)
T PRK06835 184 ENLLFYGN-TGTGKTFLSNCIAKELLDRGKTVIYR----TS-DELIENLREIR----------FNND------------N 235 (330)
T ss_pred CCEEEECC-CCCCHHHHHHHHHHHHHHCCCEEEEE----EH-HHHHHHHHHHH----------CCCC------------C
T ss_conf 86698899-99988999999999999879949996----29-99999999975----------4576------------4
Q ss_pred CHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHH--H-HCCCEEEEECCCCCHHHHHH
Q ss_conf 50788642232887999227655566767530899999--7-47944897057765045799
Q gi|254780487|r 83 IDPATINPPDINDSIIIEGIGGLLVPLTTEYLFIDLIE--R-WQFPIILCARTSLGTINHSL 141 (217)
Q Consensus 83 i~~~~~~~~~~~D~viIEGagg~~~~~~~~~~~~dla~--~-l~~~vILV~~~~~g~i~~~~ 141 (217)
T Consensus 236 ~~~~~~~~l~~~DLLIIDDLG~E~~t~~~~~~Lf~iIN~R~~~~k~tIITTNl~~~eL~~~y 297 (330)
T PRK06835 236 DAPELEDLLINCDLLIIDDLGTESITEFSKTELFNLINKRLLMNKKMIISTNLSLEELLKTY 297 (330)
T ss_pred CHHHHHHHHHHCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHH
T ss_conf 48999999961898997210345588689999999999998679997998899989999987