HHsearch alignment for GI: 254780487 and conserved domain: PRK09361

Probab=93.66  E-value=0.54  Score=25.63  Aligned_cols=120  Identities=15%  Similarity=0.125  Sum_probs=57.6

Q ss_pred             EEEEECCCCCCCHHHHHHHHHHHHHCCCCCCE-ECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf             29998358987479999999999840486120-13887380689999985578731144300145103478899985023
Q gi|254780487|r    4 RLVIVGTDTSVGKTIFASALVHALNAYYWKPI-QSGMYEETDSKTIHRIGRIPKSHIIPEKWKLRTPASPHLAAEIDGVI   82 (217)
Q Consensus         4 ~i~I~GT~t~vGKT~vs~~L~~~l~~~~~KPv-~~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (217)
T Consensus        25 itei~G~-pG~GKTtl~lq~a~~~~~~g~~vlYidt--E~~~~er~~qi~~~~~~~~~~~i~~~~-~~~~---~~~-~~~   96 (224)
T PRK09361         25 ITQIYGP-PGSGKTNICIQLAVEAARQGKKVIYIDT--EGLSPERFKQIAGEDFEELLSNIIIFE-PSSF---EEQ-REA   96 (224)
T ss_pred             EEEEECC-CCCCHHHHHHHHHHHHHHCCCCEEEECC--CCCCHHHHHHHHCCCHHHHHHCCEEEC-CCCH---HHH-HHH
T ss_conf             9999899-9985999999999999974990999678--767889999985657345420614724-7988---999-999


Q ss_pred             CHHHHHHHHHHCCEEEEECCCCCCCCCCCC----C----------CHHHHHHHHCCCEEEEEC
Q ss_conf             507886422328879992276555667675----3----------089999974794489705
Q gi|254780487|r   83 IDPATINPPDINDSIIIEGIGGLLVPLTTE----Y----------LFIDLIERWQFPIILCAR  131 (217)
Q Consensus        83 i~~~~~~~~~~~D~viIEGagg~~~~~~~~----~----------~~~dla~~l~~~vILV~~  131 (217)
T Consensus        97 i~~~~~~~~~~~~lvVIDSi~~~~~~e~~~~~~~~~~~~l~~~~~~L~~~a~~~~~~vvl~nq  159 (224)
T PRK09361         97 IQKAEKIAKENVGLIVLDSATSLYRLELDDNDNSKLNRELGKQISHLLSLARKHNIAVVITNQ  159 (224)
T ss_pred             HHHHHHHHHCCCCEEEEECCHHHEEHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEE
T ss_conf             999998750587389996230100000145765899999999999999999971986999966