HHsearch alignment for GI: 254780487 and conserved domain: PRK13235
>PRK13235 nifH nitrogenase reductase; Reviewed.
Probab=98.91 E-value=4.4e-08 Score=70.09 Aligned_cols=180 Identities=13% Similarity=0.065 Sum_probs=101.8
Q ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHC-------------CCCCCCCCCCCCC-
Q ss_conf 98329998358987479999999999840486120138873806899999855-------------7873114430014-
Q gi|254780487|r 1 MKLRLVIVGTDTSVGKTIFASALVHALNAYYWKPIQSGMYEETDSKTIHRIGR-------------IPKSHIIPEKWKL- 66 (217)
Q Consensus 1 M~~~i~I~GT~t~vGKT~vs~~L~~~l~~~~~KPv~~G~~~~~D~~~~~~~~~-------------~~~~~~~~~~~~~- 66 (217)
T Consensus 1 m~-~iaiyGKG-GVGKSTtt~NLaAALA~~GkkVl~IgcDPk~dsT~~L~gg~~~~tvld~l~~~~~~~~ledvi~~g~~ 78 (274)
T PRK13235 1 MR-KVAIYGKG-GIGKSTTTQNTVAGLAEMGKKVMVVGCDPKADSTRLLLGGLQQKTVLDTLREEGEDVELEDIIKEGYG 78 (274)
T ss_pred CC-EEEEECCC-CCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHCCCCCCCHHHHHHHCCCCCCHHHHEEECCC
T ss_conf 96-79997998-55476789999999997899799989898453667873899899789999862877677894431789
Q ss_pred ----CCCHHHHHHHHHHHCCCHHHHHHH--------HHHCCEEEEECCCCCCCCCCCC---CCHHHHHHHHCCCEEEEEC
Q ss_conf ----510347889998502350788642--------2328879992276555667675---3089999974794489705
Q gi|254780487|r 67 ----RTPASPHLAAEIDGVIIDPATINP--------PDINDSIIIEGIGGLLVPLTTE---YLFIDLIERWQFPIILCAR 131 (217)
Q Consensus 67 ----~~~~~~~~~~~~~~~~i~~~~~~~--------~~~~D~viIEGagg~~~~~~~~---~~~~dla~~l~~~vILV~~ 131 (217)
T Consensus 79 gi~cveaggp~pg~gcagrgii~~~~~L~~l~~~~~~~~~DyVl~DvLGdvvcggFa~pir~~~A~-------eV~IVts 151 (274)
T PRK13235 79 NTRCTESGGPEPGVGCAGRGIITSVNLLEQLGAYDDEWNLDYVFYDVLGDVVCGGFAMPIRDGKAE-------EIYIVCS 151 (274)
T ss_pred CEEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCC-------EEEEEEC
T ss_conf 818986899875667576315258999988177543357768998137853124511551006587-------8999916
Q ss_pred CCCCHH---HHHHHHHHHHHH-CCCEEEEEEECCCCCCCHH---HHHHHHCCCCEEEEECCCCCC
Q ss_conf 776504---579999999984-7990799997697780059---999986199899994788888
Q gi|254780487|r 132 TSLGTI---NHSLLSLETLRN-RNINIIGIAFIGDSMPKVE---ETIVKIGRIPHLGRLPKIDPI 189 (217)
Q Consensus 132 ~~~g~i---~~~~l~~~~~~~-~g~~i~GiIlN~~~~~~~~---~~le~~~~ipvLG~iP~~~~~ 189 (217)
T Consensus 152 ~E~~AL~aannI~k~i~~~~~~~~~~l~Gii~N~r~~~~~~~~v~~fa~~~g~~vi~~IPr~~~V 216 (274)
T PRK13235 152 GEMMAMYAANNICKGILKYADAGGVRLGGLICNSRKVDNEREMIEELARKLGTQMIHFVPRDNMV 216 (274)
T ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCHHH
T ss_conf 83689999999999999997437954889997367787578999999997499369975894588