HHsearch alignment for GI: 254780487 and conserved domain: PRK13886
>PRK13886 conjugal transfer protein TraL; Provisional.
Probab=96.59 E-value=0.059 Score=31.65 Aligned_cols=147 Identities=14% Similarity=0.094 Sum_probs=77.4
Q ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 98329998358987479999999999840486120138873806899999855787311443001451034788999850
Q gi|254780487|r 1 MKLRLVIVGTDTSVGKTIFASALVHALNAYYWKPIQSGMYEETDSKTIHRIGRIPKSHIIPEKWKLRTPASPHLAAEIDG 80 (217)
Q Consensus 1 M~~~i~I~GT~t~vGKT~vs~~L~~~l~~~~~KPv~~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (217)
T Consensus 1 Ma~IH~vlqgKGGVGKS~va~~LaQY~~~~~~~~~~i----DTDpvN~tf~~ykal~v~~i~I~e~~-~i~~r------- 68 (241)
T PRK13886 1 MAKIHMVLQGKGGVGKSMIAATIAQYKAGKGQKPLCI----DTDPVNATFEGYKALNVRRLNIMDGD-EINTR------- 68 (241)
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEE----ECCCCCCCHHHCCCCCCEEEEEECCC-CCCHH-------
T ss_conf 9759998558886309999999999998359998556----08999705342143675577752388-65666-------
Q ss_pred CCCHHHHHH-HHHHCCEEEEECCCCCCCCCC---CCCCHHHHHHHHCCCEEEEECC-CCCHHHHHHHHHHHHH-HCCCEE
Q ss_conf 235078864-223288799922765556676---7530899999747944897057-7650457999999998-479907
Q gi|254780487|r 81 VIIDPATIN-PPDINDSIIIEGIGGLLVPLT---TEYLFIDLIERWQFPIILCART-SLGTINHSLLSLETLR-NRNINI 154 (217)
Q Consensus 81 ~~i~~~~~~-~~~~~D~viIEGagg~~~~~~---~~~~~~dla~~l~~~vILV~~~-~~g~i~~~~l~~~~~~-~~g~~i 154 (217)
T Consensus 69 -~FD~l~E~i~~~~~~~VID~GAst-fvPL~~Yl~eN~v~~ll~e~G~~v~iH~vi~GGqa~~DT~~gl~~l~~~~~~~~ 146 (241)
T PRK13886 69 -NFDALVEMIASTEGDVIIDNGASS-FVPLSHYLISNQVPALLQDMGHELVVHTVVTGGQALLDTVSGFAQLASQFPAEC 146 (241)
T ss_pred -HHHHHHHHHHCCCCCEEEECCHHH-HHHHHHHHHHCCHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf -668999998568998899885176-778999998788699999779739999984598427789999999998658778
Q ss_pred -EEEEECC
Q ss_conf -9999769
Q gi|254780487|r 155 -IGIAFIG 161 (217)
Q Consensus 155 -~GiIlN~ 161 (217)
T Consensus 147 ~~VVWlN~ 154 (241)
T PRK13886 147 LFVVWLNP 154 (241)
T ss_pred CEEEEECC
T ss_conf 78999748