HHsearch alignment for GI: 254780487 and conserved domain: TIGR00073

>TIGR00073 hypB hydrogenase accessory protein HypB; InterPro: IPR004392 The hydrogenase accessory protein HypB is a GTP hydrolase for assembly of nickel metallocentre of hydrogenase. A similar protein, ureG, is an accessory protein for urease, which also uses nickel.; GO: 0016151 nickel ion binding, 0006461 protein complex assembly.
Probab=94.65  E-value=0.091  Score=30.49  Aligned_cols=108  Identities=21%  Similarity=0.290  Sum_probs=66.9

Q ss_pred             CCCCCHHHHHHHHHHHHHCCCCCCEECCC-CCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHH-HHH
Q ss_conf             89874799999999998404861201388-7380689999985578731144300145103478899985023507-886
Q gi|254780487|r   11 DTSVGKTIFASALVHALNAYYWKPIQSGM-YEETDSKTIHRIGRIPKSHIIPEKWKLRTPASPHLAAEIDGVIIDP-ATI   88 (217)
Q Consensus        11 ~t~vGKT~vs~~L~~~l~~~~~KPv~~G~-~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~~~   88 (217)
T Consensus        42 spGSGKT~LiEk~~~~~~~~~K~Avi~GD~~t~~DA~RlR~~G~--------~a~~~nTGk~CHLdA~mv~G~~~~L~~~  113 (225)
T TIGR00073        42 SPGSGKTTLIEKLIERLDDEVKIAVIEGDVQTKNDADRLRKYGV--------PAIQINTGKECHLDAHMVAGAIHALKDL  113 (225)
T ss_pred             CCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHCCC--------EEEEECCCCCCCCHHHHHHHHHHHHHCC
T ss_conf             88611589999999984578978999755322556999986498--------6886368864440166786587554216


Q ss_pred             HHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCC
Q ss_conf             422328879992276555667675308999997479448970577
Q gi|254780487|r   89 NPPDINDSIIIEGIGGLLVPLTTEYLFIDLIERWQFPIILCARTS  133 (217)
Q Consensus        89 ~~~~~~D~viIEGagg~~~~~~~~~~~~dla~~l~~~vILV~~~~  133 (217)
T Consensus       114 ~ld~~~DlL~IENVGNLvCP~~FdLGe~~-------rVvllSVTE  151 (225)
T TIGR00073       114 PLDDISDLLLIENVGNLVCPADFDLGEHM-------RVVLLSVTE  151 (225)
T ss_pred             CCCCCCCEEEEEECCCCEECCCCCCCCCC-------EEEEEEECC
T ss_conf             88871462688644761006731123563-------079998658