HHsearch alignment for GI: 254780487 and conserved domain: TIGR00750
>TIGR00750 lao LAO/AO transport system ATPase; InterPro: IPR005129 Bacterial periplasmic transport systems require the function of a specific substrate-binding protein, located in the periplasm, and several cytoplasmic membrane transport components. In Escherichia coli K-12, the arginine-ornithine transport system requires an arginine-ornithine-binding protein and the lysine-arginine-ornithine (LAO) transport system includes a LAO-binding protein. Both periplasmic proteins can be phosphorylated by a single kinase, ArgK resulting in reduced levels of transport activity of the periplasmic transport systems that include each of the binding proteins. The ArgK protein acts as an ATPase enzyme and as a kinase..
Probab=97.51 E-value=0.00057 Score=44.31 Aligned_cols=119 Identities=16% Similarity=0.170 Sum_probs=68.0
Q ss_pred CEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEE----------CCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCHHH
Q ss_conf 3299983589874799999999998404861201----------388738068999998557873114430014510347
Q gi|254780487|r 3 LRLVIVGTDTSVGKTIFASALVHALNAYYWKPIQ----------SGMYEETDSKTIHRIGRIPKSHIIPEKWKLRTPASP 72 (217)
Q Consensus 3 ~~i~I~GT~t~vGKT~vs~~L~~~l~~~~~KPv~----------~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (217)
T Consensus 39 ~~vG~TG~-PGaGKSTl~~~l~~~lrRrG~~-VaViAvDP~SPfTGGsiLGDr~Rm~~~asrkqlW~dPg~FIRs~ptrG 116 (333)
T TIGR00750 39 HVVGITGV-PGAGKSTLVEKLIMELRRRGLK-VAVIAVDPSSPFTGGSILGDRLRMQRLASRKQLWTDPGVFIRSMPTRG 116 (333)
T ss_pred EEEEEECC-CCCCHHHHHHHHHHHHHHCCCE-EEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCC
T ss_conf 78766468-8885777999998999765976-899988797597551454568877544222233228985676776667
Q ss_pred HHHHHHHHCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEC
Q ss_conf 88999850235078864223288799922765556676753089999974794489705
Q gi|254780487|r 73 HLAAEIDGVIIDPATINPPDINDSIIIEGIGGLLVPLTTEYLFIDLIERWQFPIILCAR 131 (217)
Q Consensus 73 ~~~~~~~~~~i~~~~~~~~~~~D~viIEGagg~~~~~~~~~~~~dla~~l~~~vILV~~ 131 (217)
T Consensus 117 ~l-GGls~at~~~~~lldA~G~DVI~vETVGV-------GQSEVdi~~~aDT~v~v~~p 167 (333)
T TIGR00750 117 SL-GGLSKATRELVKLLDAAGYDVILVETVGV-------GQSEVDIINMADTFVVVTIP 167 (333)
T ss_pred CH-HHHHHHHHHHHHHHHHCCCCEEEEEEECC-------CHHHHHHHHHHCEEEEEECC
T ss_conf 52-57879999999999863898799984157-------52487887341505898548