HHsearch alignment for GI: 254780487 and conserved domain: TIGR01005
>TIGR01005 eps_transp_fam exopolysaccharide transport protein family; InterPro: IPR005700 The bacterial exopolysaccharide transport protein is part of a large genetic locus which is associated with exopolysaccharide (EPS) biosynthesis. Detailed molecular characterization and gene fusion analysis revealed at least seven gene products are involved in the overall regulation, which among other things, include exopolysaccharide biosynthesis, property of conferring virulence and exopolysaccharide export.; GO: 0015542 sugar efflux transmembrane transporter activity, 0006859 extracellular carbohydrate transport.
Probab=94.78 E-value=0.32 Score=27.07 Aligned_cols=154 Identities=14% Similarity=0.103 Sum_probs=85.2
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHHCCC----------CCCEEC---------CCCC--CCHHHHHHHHHCCCCC-CCCC
Q ss_conf 2999835898747999999999984048----------612013---------8873--8068999998557873-1144
Q gi|254780487|r 4 RLVIVGTDTSVGKTIFASALVHALNAYY----------WKPIQS---------GMYE--ETDSKTIHRIGRIPKS-HIIP 61 (217)
Q Consensus 4 ~i~I~GT~t~vGKT~vs~~L~~~l~~~~----------~KPv~~---------G~~~--~~D~~~~~~~~~~~~~-~~~~ 61 (217)
T Consensus 563 vv~~~~p~p~~Gks~i~an~aaliA~ggkR~llidad~rk~~l~q~~~~~~~~GL~d~LaG~rs~~~~~~~~~~~~l~~l 642 (778)
T TIGR01005 563 VVALASPLPDVGKSIIEANLAALIAAGGKRVLLIDADIRKAALSQILVKAEKSGLLDLLAGERSLELDVKAEVAAKLDIL 642 (778)
T ss_pred EEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHH
T ss_conf 58856888866568899999999832687178732677605556442147888537556424656630340236771123
Q ss_pred C-C--CCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEE-EEECCCCCHH
Q ss_conf 3-0--0145103478899985023507886422328879992276555667675308999997479448-9705776504
Q gi|254780487|r 62 E-K--WKLRTPASPHLAAEIDGVIIDPATINPPDINDSIIIEGIGGLLVPLTTEYLFIDLIERWQFPII-LCARTSLGTI 137 (217)
Q Consensus 62 ~-~--~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~D~viIEGagg~~~~~~~~~~~~dla~~l~~~vI-LV~~~~~g~i 137 (217)
T Consensus 643 ~~GGas~~~h~~~eLLasp----a~~~l~~~ar~~~D~vvvd~~~~------~pV~d~~a~a~la~~~lslvt~~~r~~~ 712 (778)
T TIGR01005 643 DAGGASLLRHNSSELLASP----AMVELVENARSAYDLVVVDVAAV------APVADAKALAALADLVLSLVTEYDRSVV 712 (778)
T ss_pred HCCCCCCCCCCCCHHHCCH----HHHHHHHHHHHHCCEEEECCCHH------HHHHHHHHHHHCCCEEEHHEEEECCEEH
T ss_conf 3476124788841532166----88999998865188577455312------4899999974224200200111144104
Q ss_pred HHHHHHHHHHHHCCCEEEEEEECCCCCCCH
Q ss_conf 579999999984799079999769778005
Q gi|254780487|r 138 NHSLLSLETLRNRNINIIGIAFIGDSMPKV 167 (217)
Q Consensus 138 ~~~~l~~~~~~~~g~~i~GiIlN~~~~~~~ 167 (217)
T Consensus 713 ~~~r~~~~~~~~~n~~v~gV~ln~ldpn~~ 742 (778)
T TIGR01005 713 ELVRELLKSLSRLNSEVLGVVLNKLDPNEL 742 (778)
T ss_pred HHHHHHHHHHHHCCCEEEEEEECCCCCCCH
T ss_conf 442887754453186045665045575201