HHsearch alignment for GI: 254780487 and conserved domain: TIGR01968
>TIGR01968 minD_bact septum site-determining protein MinD; InterPro: IPR010223 This entry describes the bacterial and chloroplast form of MinD, a multifunctional cell division protein that guides correct placement of the septum. In Escherichia coli, the cell division site is determined by the cooperative activity of min operon products MinC, MinD, and MinE . MinD is a membrane-associated ATPase and is a septum site-determining factor through the activation and regulation of MinC and MinE. MinD is also known to undergo a rapid pole-to-pole oscillation movement in vivo as observed by fluorescent microscopy. In plants, chloroplast division requires the dimerisation of stromal MinD . The homologous archaeal MinD proteins, with many archaeal genomes having two or more forms, are described by a separate model.; GO: 0016887 ATPase activity, 0000918 selection of site for barrier septum formation.
Probab=98.72 E-value=1.2e-07 Score=67.42 Aligned_cols=179 Identities=18% Similarity=0.149 Sum_probs=106.9
Q ss_pred CCEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCEEC----CCCCCCHHH---------HHHHHHCCCCCC--CCCCCCCC
Q ss_conf 832999835898747999999999984048612013----887380689---------999985578731--14430014
Q gi|254780487|r 2 KLRLVIVGTDTSVGKTIFASALVHALNAYYWKPIQS----GMYEETDSK---------TIHRIGRIPKSH--IIPEKWKL 66 (217)
Q Consensus 2 ~~~i~I~GT~t~vGKT~vs~~L~~~l~~~~~KPv~~----G~~~~~D~~---------~~~~~~~~~~~~--~~~~~~~~ 66 (217)
T Consensus 1 ~~viViTSGKGGVGKTTtTANlG~aLA~lG~kVvliD~DiG-LRNLD~~lGLEnRivYt~vDVveG~C~l~qALikDKr~ 79 (272)
T TIGR01968 1 ARVIVITSGKGGVGKTTTTANLGTALARLGKKVVLIDADIG-LRNLDLLLGLENRIVYTLVDVVEGECRLQQALIKDKRL 79 (272)
T ss_pred CEEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEECCCC-CHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCCCCCC
T ss_conf 95899981788977358989999999961982899954757-03457774231035453554324842110010012675
Q ss_pred CCCHHHHHHHHH-HHC-----CCHHHHHHHHHH--CCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHH
Q ss_conf 510347889998-502-----350788642232--887999227655566767530899999747944897057765045
Q gi|254780487|r 67 RTPASPHLAAEI-DGV-----IIDPATINPPDI--NDSIIIEGIGGLLVPLTTEYLFIDLIERWQFPIILCARTSLGTIN 138 (217)
Q Consensus 67 ~~~~~~~~~~~~-~~~-----~i~~~~~~~~~~--~D~viIEGagg~~~~~~~~~~~~dla~~l~~~vILV~~~~~g~i~ 138 (217)
T Consensus 80 ~-NL~LLpAsQ~rdK~~~~~E~~~~lv~~Lk~~~~FDYviIDcPAGIE~GF~nAv~~Ad-------~AiVVttPEvsavR 151 (272)
T TIGR01968 80 E-NLYLLPASQTRDKDAVTPEQMKKLVNELKEEEHFDYVIIDCPAGIESGFRNAVAPAD-------EAIVVTTPEVSAVR 151 (272)
T ss_pred H-HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHCC-------EEEEEECCCCCCHH
T ss_conf 2-356636530236134697789999999854379307997378774356899875268-------35898778745100
Q ss_pred HHHHHHHHHHHCC-CEE------EEEEECCCCCCCHH-------HHHHHHCCCCEEEEECCCCCC
Q ss_conf 7999999998479-907------99997697780059-------999986199899994788888
Q gi|254780487|r 139 HSLLSLETLRNRN-INI------IGIAFIGDSMPKVE-------ETIVKIGRIPHLGRLPKIDPI 189 (217)
Q Consensus 139 ~~~l~~~~~~~~g-~~i------~GiIlN~~~~~~~~-------~~le~~~~ipvLG~iP~~~~~ 189 (217)
T Consensus 152 DADRvIGlLea~~~i~~~GEE~~~~LivNR~rP~mV~~G~Mlsi~Dv~~~L~i~LiGviPeD~~i 216 (272)
T TIGR01968 152 DADRVIGLLEAKGNIEEKGEEVKIKLIVNRLRPEMVKKGDMLSIDDVLEILSIPLIGVIPEDEEI 216 (272)
T ss_pred HHHHHHHHHCCCCCCCCCCCEEEEEEEEECCCHHHHHCCCCCCHHHHHHHCCCCCEEEECCCCCE
T ss_conf 25567524212455445776464347785156477416898278999986088616863299865