HHsearch alignment for GI: 254780487 and conserved domain: TIGR02533
>TIGR02533 type_II_gspE general secretory pathway protein E; InterPro: IPR013369 GspE, the E protein of the type II secretion system, is also referred to as the main terminal branch of the general secretion pathway. ; GO: 0005524 ATP binding, 0008565 protein transporter activity, 0015628 protein secretion by the type II secretion system, 0015627 type II protein secretion system complex.
Probab=90.59 E-value=0.2 Score=28.35 Aligned_cols=21 Identities=38% Similarity=0.521 Sum_probs=15.7
Q ss_pred EEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 2999835898747999999999984
Q gi|254780487|r 4 RLVIVGTDTSVGKTIFASALVHALN 28 (217)
Q Consensus 4 ~i~I~GT~t~vGKT~vs~~L~~~l~ 28 (217)
T Consensus 247 IiLVTGP-TGSGKtTT---LYaaL~ 267 (495)
T TIGR02533 247 IILVTGP-TGSGKTTT---LYAALS 267 (495)
T ss_pred EEEECCC-CCCCHHHH---HHHHHH
T ss_conf 1884177-89852588---999998