HHsearch alignment for GI: 254780487 and conserved domain: cd02026
>cd02026 PRK Phosphoribulokinase (PRK) is an enzyme involved in the Benson-Calvin cycle in chloroplasts or photosynthetic prokaryotes. This enzyme catalyzes the phosphorylation of D-ribulose 5-phosphate to form D-ribulose 1, 5-biphosphate, using ATP and NADPH produced by the primary reactions of photosynthesis.
Probab=95.62 E-value=0.087 Score=30.62 Aligned_cols=115 Identities=18% Similarity=0.180 Sum_probs=53.4
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCC-HHHHHHHHHHHCCC
Q ss_conf 99983589874799999999998404861201388738068999998557873114430014510-34788999850235
Q gi|254780487|r 5 LVIVGTDTSVGKTIFASALVHALNAYYWKPIQSGMYEETDSKTIHRIGRIPKSHIIPEKWKLRTP-ASPHLAAEIDGVII 83 (217)
Q Consensus 5 i~I~GT~t~vGKT~vs~~L~~~l~~~~~KPv~~G~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i 83 (217)
T Consensus 2 IgVaG~-SGSGKTTv~~~i~~ifg~~~v~vI~~D~Yhr~dr~~r-~~~~~--t~~~--P~And~dll~~~l~~Lk~Gk~i 75 (273)
T cd02026 2 IGVAGD-SGCGKSTFLRRLTSLFGSDLVTVICLDDYHSLDRKGR-KETGI--TALD--PRANNFDLMYEQLKALKEGQAI 75 (273)
T ss_pred EEEECC-CCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHH-HHHCC--CCCC--CCHHHHHHHHHHHHHHHCCCCC
T ss_conf 899788-8786999999999985848769996577788998999-87187--7689--7523499999999999859953
Q ss_pred HHH---H-------HHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCC
Q ss_conf 078---8-------6422328879992276555667675308999997479448970577
Q gi|254780487|r 84 DPA---T-------INPPDINDSIIIEGIGGLLVPLTTEYLFIDLIERWQFPIILCARTS 133 (217)
Q Consensus 84 ~~~---~-------~~~~~~~D~viIEGagg~~~~~~~~~~~~dla~~l~~~vILV~~~~ 133 (217)
T Consensus 76 ~~PvYdh~tg~~~~~e~i~p~diII~EGLh~l~~~--------~lrdl~DLkIfVD~d~d 127 (273)
T cd02026 76 EKPIYNHVTGLIDPPELIKPTKIVVIEGLHPLYDE--------RVRELLDFSVYLDISDE 127 (273)
T ss_pred CCCCCCCCCCCCCCCEEECCCCEEEEECEECCCCH--------HHHHHHCEEEEECCCHH
T ss_conf 43222145896577565068747999220002668--------89866074688568764