HHsearch alignment for GI: 254780487 and conserved domain: cd02036

>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=98.91  E-value=1.9e-08  Score=72.30  Aligned_cols=146  Identities=21%  Similarity=0.230  Sum_probs=92.0

Q ss_pred             EEEECCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHH--HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf             9998358987479999999999840486120138873806899--99985578731144300145103478899985023
Q gi|254780487|r    5 LVIVGTDTSVGKTIFASALVHALNAYYWKPIQSGMYEETDSKT--IHRIGRIPKSHIIPEKWKLRTPASPHLAAEIDGVI   82 (217)
Q Consensus         5 i~I~GT~t~vGKT~vs~~L~~~l~~~~~KPv~~G~~~~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (217)
T Consensus         2 Iav~s~KGGVGKTT~a~NLA~aLa~~g~~vllv----D~D~~~~~l~~~~~~~~----------~~~~~-----------   56 (179)
T cd02036           2 IVVTSGKGGVGKTTTTANLGTALAQLGYKVVLI----DADLGLRNLDLILGLEN----------RVVYT-----------   56 (179)
T ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEE----ECCCCCCCCHHHCCCCC----------CCCCH-----------
T ss_conf             899739998709999999999999779918999----58999998366617655----------66531-----------


Q ss_pred             CHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCC
Q ss_conf             50788642232887999227655566767530899999747944897057765045799999999847990799997697
Q gi|254780487|r   83 IDPATINPPDINDSIIIEGIGGLLVPLTTEYLFIDLIERWQFPIILCARTSLGTINHSLLSLETLRNRNINIIGIAFIGD  162 (217)
Q Consensus        83 i~~~~~~~~~~~D~viIEGagg~~~~~~~~~~~~dla~~l~~~vILV~~~~~g~i~~~~l~~~~~~~~g~~i~GiIlN~~  162 (217)
T Consensus        57 ---~~~vl--~gD~viiD~ppg~~~------~~~~~l~~ad-~vlvv~~p~~~sl~~~~~~~~~~~~~~~~~~~vv~Nr~  124 (179)
T cd02036          57 ---LHDVL--AGDYILIDSPAGIER------GFITAIAPAD-EALLVTTPEISSLRDADRVKGLLEALGIKVVGVIVNRV  124 (179)
T ss_pred             ---HHCCC--CCCEEEEECCCCCCH------HHHHHHHHCC-CCEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf             ---31126--699999979999888------9999998468-12563788588999999999999825996469998454


Q ss_pred             CCC-----CHHHHHHHHCCCCEEEEECCCC
Q ss_conf             780-----0599999861998999947888
Q gi|254780487|r  163 SMP-----KVEETIVKIGRIPHLGRLPKID  187 (217)
Q Consensus       163 ~~~-----~~~~~le~~~~ipvLG~iP~~~  187 (217)
T Consensus       125 ~~~~~~~~~~~~~~~~~l~~~vlg~IP~d~  154 (179)
T cd02036         125 RPDMVEGGDMVEDIEEILGVPLLGVIPEDP  154 (179)
T ss_pred             CCCCCCHHHHHHHHHHHCCCCEEEECCCCH
T ss_conf             676663677999999855996798877988