HHsearch alignment for GI: 254780487 and conserved domain: cd02036
>cd02036 MinD Bacterial cell division requires the formation of a septum at mid-cell. The site is determined by the min operon products MinC, MinD and MinE. MinC is a nonspecific inhibitor of the septum protein FtsZ. MinE is the supressor of MinC. MinD plays a pivotal role, selecting the mid-cell over other sites through the activation and regulation of MinC and MinE. MinD is a membrane-associated ATPase, related to nitrogenase iron protein. More distantly related proteins include flagellar biosynthesis proteins and ParA chromosome partitioning proteins. MinD is a monomer.
Probab=98.91 E-value=1.9e-08 Score=72.30 Aligned_cols=146 Identities=21% Similarity=0.230 Sum_probs=92.0
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHH--HHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
Q ss_conf 9998358987479999999999840486120138873806899--99985578731144300145103478899985023
Q gi|254780487|r 5 LVIVGTDTSVGKTIFASALVHALNAYYWKPIQSGMYEETDSKT--IHRIGRIPKSHIIPEKWKLRTPASPHLAAEIDGVI 82 (217)
Q Consensus 5 i~I~GT~t~vGKT~vs~~L~~~l~~~~~KPv~~G~~~~~D~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (217)
T Consensus 2 Iav~s~KGGVGKTT~a~NLA~aLa~~g~~vllv----D~D~~~~~l~~~~~~~~----------~~~~~----------- 56 (179)
T cd02036 2 IVVTSGKGGVGKTTTTANLGTALAQLGYKVVLI----DADLGLRNLDLILGLEN----------RVVYT----------- 56 (179)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEE----ECCCCCCCCHHHCCCCC----------CCCCH-----------
T ss_conf 899739998709999999999999779918999----58999998366617655----------66531-----------
Q ss_pred CHHHHHHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHCCCEEEEEEECCC
Q ss_conf 50788642232887999227655566767530899999747944897057765045799999999847990799997697
Q gi|254780487|r 83 IDPATINPPDINDSIIIEGIGGLLVPLTTEYLFIDLIERWQFPIILCARTSLGTINHSLLSLETLRNRNINIIGIAFIGD 162 (217)
Q Consensus 83 i~~~~~~~~~~~D~viIEGagg~~~~~~~~~~~~dla~~l~~~vILV~~~~~g~i~~~~l~~~~~~~~g~~i~GiIlN~~ 162 (217)
T Consensus 57 ---~~~vl--~gD~viiD~ppg~~~------~~~~~l~~ad-~vlvv~~p~~~sl~~~~~~~~~~~~~~~~~~~vv~Nr~ 124 (179)
T cd02036 57 ---LHDVL--AGDYILIDSPAGIER------GFITAIAPAD-EALLVTTPEISSLRDADRVKGLLEALGIKVVGVIVNRV 124 (179)
T ss_pred ---HHCCC--CCCEEEEECCCCCCH------HHHHHHHHCC-CCEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf ---31126--699999979999888------9999998468-12563788588999999999999825996469998454
Q ss_pred CCC-----CHHHHHHHHCCCCEEEEECCCC
Q ss_conf 780-----0599999861998999947888
Q gi|254780487|r 163 SMP-----KVEETIVKIGRIPHLGRLPKID 187 (217)
Q Consensus 163 ~~~-----~~~~~le~~~~ipvLG~iP~~~ 187 (217)
T Consensus 125 ~~~~~~~~~~~~~~~~~l~~~vlg~IP~d~ 154 (179)
T cd02036 125 RPDMVEGGDMVEDIEEILGVPLLGVIPEDP 154 (179)
T ss_pred CCCCCCHHHHHHHHHHHCCCCEEEECCCCH
T ss_conf 676663677999999855996798877988