HHsearch alignment for GI: 254780487 and conserved domain: pfam00485
>pfam00485 PRK Phosphoribulokinase / Uridine kinase family. In Arabidopsis the region carries two binding domains, a phosphoribosylpyrophosphate-binding domain and, at the very C-terminus, a uracil-binding domain.
Probab=96.32 E-value=0.024 Score=34.13 Aligned_cols=119 Identities=14% Similarity=0.027 Sum_probs=56.5
Q ss_pred EEEECCCCCCCHHHHHHHHHHHHHCCCCCCEECCCC--CCCHHHH-----HHHHHCCCCCCCCCCCCCCCCCH-HHHHHH
Q ss_conf 999835898747999999999984048612013887--3806899-----99985578731144300145103-478899
Q gi|254780487|r 5 LVIVGTDTSVGKTIFASALVHALNAYYWKPIQSGMY--EETDSKT-----IHRIGRIPKSHIIPEKWKLRTPA-SPHLAA 76 (217)
Q Consensus 5 i~I~GT~t~vGKT~vs~~L~~~l~~~~~KPv~~G~~--~~~D~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 76 (217)
T Consensus 2 IgIaG~-SgSGKTT~a~~L~~~l~~~~~~~~~~~~d~~~~~d~~~~~~~~~~~~~~~~~~~~~d~P~a~d~~ll~~~l~~ 80 (196)
T pfam00485 2 IGVAGS-SGAGKTTVARTFVSIFGREGVPAAGIEGDSFHRYDRFYMDLHMEDRKRAGNNHYSFFSPEANDFDLLYEQFKE 80 (196)
T ss_pred EEEECC-CCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf 899899-8571999999999996605877641243179860410244375767651457889789662359999999999
Q ss_pred HHHHCCCHH---HH--------HHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECC
Q ss_conf 985023507---88--------642232887999227655566767530899999747944897057
Q gi|254780487|r 77 EIDGVIIDP---AT--------INPPDINDSIIIEGIGGLLVPLTTEYLFIDLIERWQFPIILCART 132 (217)
Q Consensus 77 ~~~~~~i~~---~~--------~~~~~~~D~viIEGagg~~~~~~~~~~~~dla~~l~~~vILV~~~ 132 (217)
T Consensus 81 Lk~g~~i~~P~Ydf~~~~r~~~~~~i~p~~viIvEGi~~l~~~--------~ir~l~D~kIfid~~~ 139 (196)
T pfam00485 81 LKEGGSGDKPIYNHVTGEADPWPELIEGADILFIEGLHGLYDE--------RVAQLLDLKIYVDPDI 139 (196)
T ss_pred HHCCCCEEEEEEECCCCCCCCCCEECCCCCEEEEECHHHCCCH--------HHHHHHCEEEEEECCC
T ss_conf 7089945765675134533677366178856999433330327--------7887638479972680