HHsearch alignment for GI: 254780487 and conserved domain: pfam00485

>pfam00485 PRK Phosphoribulokinase / Uridine kinase family. In Arabidopsis the region carries two binding domains, a phosphoribosylpyrophosphate-binding domain and, at the very C-terminus, a uracil-binding domain.
Probab=96.32  E-value=0.024  Score=34.13  Aligned_cols=119  Identities=14%  Similarity=0.027  Sum_probs=56.5

Q ss_pred             EEEECCCCCCCHHHHHHHHHHHHHCCCCCCEECCCC--CCCHHHH-----HHHHHCCCCCCCCCCCCCCCCCH-HHHHHH
Q ss_conf             999835898747999999999984048612013887--3806899-----99985578731144300145103-478899
Q gi|254780487|r    5 LVIVGTDTSVGKTIFASALVHALNAYYWKPIQSGMY--EETDSKT-----IHRIGRIPKSHIIPEKWKLRTPA-SPHLAA   76 (217)
Q Consensus         5 i~I~GT~t~vGKT~vs~~L~~~l~~~~~KPv~~G~~--~~~D~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~   76 (217)
T Consensus         2 IgIaG~-SgSGKTT~a~~L~~~l~~~~~~~~~~~~d~~~~~d~~~~~~~~~~~~~~~~~~~~~d~P~a~d~~ll~~~l~~   80 (196)
T pfam00485         2 IGVAGS-SGAGKTTVARTFVSIFGREGVPAAGIEGDSFHRYDRFYMDLHMEDRKRAGNNHYSFFSPEANDFDLLYEQFKE   80 (196)
T ss_pred             EEEECC-CCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEECHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHH
T ss_conf             899899-8571999999999996605877641243179860410244375767651457889789662359999999999


Q ss_pred             HHHHCCCHH---HH--------HHHHHHCCEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEECC
Q ss_conf             985023507---88--------642232887999227655566767530899999747944897057
Q gi|254780487|r   77 EIDGVIIDP---AT--------INPPDINDSIIIEGIGGLLVPLTTEYLFIDLIERWQFPIILCART  132 (217)
Q Consensus        77 ~~~~~~i~~---~~--------~~~~~~~D~viIEGagg~~~~~~~~~~~~dla~~l~~~vILV~~~  132 (217)
T Consensus        81 Lk~g~~i~~P~Ydf~~~~r~~~~~~i~p~~viIvEGi~~l~~~--------~ir~l~D~kIfid~~~  139 (196)
T pfam00485        81 LKEGGSGDKPIYNHVTGEADPWPELIEGADILFIEGLHGLYDE--------RVAQLLDLKIYVDPDI  139 (196)
T ss_pred             HHCCCCEEEEEEECCCCCCCCCCEECCCCCEEEEECHHHCCCH--------HHHHHHCEEEEEECCC
T ss_conf             7089945765675134533677366178856999433330327--------7887638479972680