HHsearch alignment for GI: 254780487 and conserved domain: pfam08245
>pfam08245 Mur_ligase_M Mur ligase middle domain.
Probab=92.46 E-value=0.81 Score=24.52 Aligned_cols=29 Identities=31% Similarity=0.248 Sum_probs=23.0
Q ss_pred EECCCCCCCHHHHHHHHHHHHHCCCCCCEECC
Q ss_conf 98358987479999999999840486120138
Q gi|254780487|r 7 IVGTDTSVGKTIFASALVHALNAYYWKPIQSG 38 (217)
Q Consensus 7 I~GT~t~vGKT~vs~~L~~~l~~~~~KPv~~G 38 (217)
T Consensus 1 VTGT~---GKTTt~~ml~~iL~~~g~~~~~~g 29 (188)
T pfam08245 1 ITGTN---GKTTTTELIAALLSAAGGVVGTGG 29 (188)
T ss_pred CCCCC---CHHHHHHHHHHHHHHCCCCEEEEC
T ss_conf 93758---689999999999983899899838