HHsearch alignment for GI: 254780488 and conserved domain: COG0001
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism].
Probab=100.00 E-value=0 Score=566.00 Aligned_cols=388 Identities=26% Similarity=0.385 Sum_probs=322.6
Q ss_pred CCHHHCCCCCC-CCEEEEEEEEEEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHH
Q ss_conf 34122767877-86468862132899689876464102377536787899999999999985220102456897899999
Q gi|254780488|r 11 WHPFVQHFCNP-TFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAEQLA 89 (423)
Q Consensus 11 ~~~~~~~~~~~-~p~~i~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~q~~~~~~~~~~~~~~~~~~~la 89 (423)
T Consensus 23 nspvra~~~v~~~P~fi~~g~Ga~l~DvDGn~YIDy~~~~Gp~ilGH~~p~V~~Av~~~l~~G---~~fg~Pte~Ei~~A 99 (432)
T COG0001 23 NSPVRAFKSVGGYPIFIERGKGAYLTDVDGNEYIDYVLGWGPLILGHAHPAVVEAVQEQLERG---LSFGAPTELEVELA 99 (432)
T ss_pred CCCCCCCCCCCCCCEEEEECCCCEEEECCCCEEEEHHCCCCCCCCCCCCHHHHHHHHHHHHHC---CCCCCCCHHHHHHH
T ss_conf 862013678899984677455786994799875401305765000889879999999999726---77789977899999
Q ss_pred HHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCC--CCCCCCCCCCC----
Q ss_conf 999972037864111026542025677776430013344332113432025665321123432--23333332223----
Q gi|254780488|r 90 RLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVS--MRGAFNNSYEP---- 163 (423)
Q Consensus 90 ~~l~~~~p~~~~~v~f~~SGsEA~e~Alklar~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~s--~~~~~~~~~~p---- 163 (423)
T Consensus 100 ell~~~~p-~~e~vrfvnSGTEAtmsAiRlARa~-----TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~ 173 (432)
T COG0001 100 ELLIERVP-SIEKVRFVNSGTEATMSAIRLARAY-----TGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPA 173 (432)
T ss_pred HHHHHHCC-CCCEEEEECCHHHHHHHHHHHHHHH-----HCCCEEEEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCH
T ss_conf 99998658-6508998606408999999999876-----47975999728888871187842676755578999999973
Q ss_pred -CCCCCCCEECCCCCCCCCCCCHHHHHCC--CCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCCC
Q ss_conf -4454210001222222211110122127--7511343116554321122223332110011011123420001221244
Q gi|254780488|r 164 -LLFDVETIPFPHHNEEQKTLDDLEKHCS--TQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTG 240 (423)
Q Consensus 164 -~~~~~~~i~~~~~~~~~~~l~~l~~~~~--~~~iaavi~EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~DEV~tG 240 (423)
T Consensus 174 ~~a~~ti~~~y-------ND~~al~~~~~~~g~~IAaVIvEP-v~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTG 245 (432)
T COG0001 174 DVAKHTLVLPY-------NDLEALEEAFEEYGDDIAAVIVEP-VAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITG 245 (432)
T ss_pred HHHCCEEEECC-------CCHHHHHHHHHHCCCCEEEEEECC-CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEECCHHH
T ss_conf 45344788457-------999999999987689679999542-4678898989878999999999971948998622120
Q ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCC
Q ss_conf 44555431122334444202013443322234443322401321000122222222333332222100110000000001
Q gi|254780488|r 241 WGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEK 320 (423)
Q Consensus 241 ~GRtG~~~a~~~~gi~PDi~~~gK~l~gG~~pisav~~~~~i~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~ 320 (423)
T Consensus 246 F-R~~~gGaq~~~gi~PDlttlGKiIGGG-lP~ga~gGr~eiM~~~~p~---g~vyqaGT~sgnplamaAG~atl~~l~~ 320 (432)
T COG0001 246 F-RVALGGAQGYYGVEPDLTTLGKIIGGG-LPIGAFGGRAEIMEQLAPL---GPVYQAGTLSGNPLAMAAGLATLEELMT 320 (432)
T ss_pred C-CCCCCCCCCCCCCCCCHHHHHHHHCCC-CCEEEECCHHHHHHHHCCC---CCCCCCCCCCCCHHHHHHHHHHHHHHHH
T ss_conf 4-547764201008696333222440477-5201125699999632778---8764567778868999999999999873
Q ss_pred C-CCCCCCCCHHHHHHHHHHHHHHCCCE-EEECCCCCEEEEEECCCCCCCCCH-------HHHHHHHHHHHCCEEEEECC
Q ss_conf 1-23322210026789899997518977-777455339999970687666410-------68999999997885999519
Q gi|254780488|r 321 E-PVIERIKNLERMHADRLSLLKSNKKF-VNIRQMGTIVALDFNVQNKGYFFD-------KNAKLKNFFREKKILIRPLG 391 (423)
Q Consensus 321 ~-~l~~~~~~~g~~l~~~l~~L~~~~~v-~~vrG~Gl~~~iel~~~~~~~~~~-------~~~~l~~~l~~~Gil~~~~g 391 (423)
T Consensus 321 ~~~~y~~l~~~~~~L~~gl~~~~~~~g~~~~v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~l~ps~ 400 (432)
T COG0001 321 EEGVYERLDALGERLAEGLRAAAERHGIPLTVNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVYLAPSQ 400 (432)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEEEEEECCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCCCCCC
T ss_conf 65189999999999999999999983998588620425899955899888999986356999999999996882347755
Q ss_pred -CEEEECCCCCCCHHHHHHHHHHHHHHHHHHC
Q ss_conf -9899568987879999999999999998755
Q gi|254780488|r 392 -HIMYLMPPYCITATDLDHIYNTINEAVDFLE 422 (423)
Q Consensus 392 -n~i~l~Ppl~it~~eId~~l~~l~~aL~~le 422 (423)
T Consensus 401 ~ea~flS~a--hte~di~~~~~a~~~~~~~~~ 430 (432)
T COG0001 401 FEAGFLSTA--HTEEDIDRTLEAADEAFKELA 430 (432)
T ss_pred CCCEEEECC--CCHHHHHHHHHHHHHHHHHHH
T ss_conf 554552004--689999999999999999863