HHsearch alignment for GI: 254780488 and conserved domain: COG0112
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism].
Probab=97.70 E-value=0.0059 Score=40.14 Aligned_cols=310 Identities=20% Similarity=0.265 Sum_probs=143.1
Q ss_pred CCHHHHHHHHHHHHH-HCCHH-------CCCCCCHHHHHHHHHHH-HHCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCC
Q ss_conf 899999999999985-22010-------24568978999999999-7203786411102654202567777643001334
Q gi|254780488|r 57 RHPIIMNAIRSASEN-YDQII-------FSEYTHEPAEQLARLLI-KIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNN 127 (423)
Q Consensus 57 ~~~~i~~a~~~q~~~-~~~~~-------~~~~~~~~~~~la~~l~-~~~p~~~~~v~f~~SGsEA~e~Alklar~~~~~~ 127 (423)
T Consensus 38 ~S~aV~~A~gS~ltnKYAEGyPgkRyYgGce~V-D~vE~laierak~LFga~~anVQ-PhSGs~AN~av~~Al------- 108 (413)
T COG0112 38 TSPAVMEAQGSDLTNKYAEGYPGKRYYGGCEYV-DEVEELAIERAKKLFGAEYANVQ-PHSGSQANQAVYLAL------- 108 (413)
T ss_pred CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEH-HHHHHHHHHHHHHHHCCCCCCCC-CCCCHHHHHHHHHHH-------
T ss_conf 789999997457753011589976356787217-99999999999998488750458-887568999999997-------
Q ss_pred CCCCCEEEEEECCCCCCCC-C-CCCCCCCCCCCCCCCCCCCCCCCEECCCCCC-CCCCCCHHHH---HCCCCCEEEEECC
Q ss_conf 4332113432025665321-1-2343223333332223445421000122222-2211110122---1277511343116
Q gi|254780488|r 128 NMPRNKIVVMEHGYHGDTI-G-SMSVSMRGAFNNSYEPLLFDVETIPFPHHNE-EQKTLDDLEK---HCSTQKIAAFLVE 201 (423)
Q Consensus 128 ~~~r~~ii~~~~~yHG~t~-~-a~s~s~~~~~~~~~~p~~~~~~~i~~~~~~~-~~~~l~~l~~---~~~~~~iaavi~E 201 (423)
T Consensus 109 l~pGD~imgm~l~~GGHltHg~~v~~sG----------~~--~~~v~Y~vd~et~~IDyD~~~k~a~e~kPK----lii- 171 (413)
T COG0112 109 LQPGDTIMGLDLSHGGHLTHGSPVNFSG----------KL--FNVVSYGVDPETGLIDYDEVEKLAKEVKPK----LII- 171 (413)
T ss_pred CCCCCEEEECCCCCCCCCCCCCCCCCCC----------CE--EEEEECCCCCCCCCCCHHHHHHHHHHHCCC----EEE-
T ss_conf 3898857505678787655799877664----------05--776762406334751799999999984997----899-
Q ss_pred CCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCC-CCCCCCCCCCCCCCCCCCCCCEEE--CCCCCCCCCCCCCCCCC
Q ss_conf 554321122223332110011011123420001221-244445554311223344442020--13443322234443322
Q gi|254780488|r 202 PLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEV-MTGWGRTGKIFACNHADITPDILC--LSKGITGGALPLAATLC 278 (423)
Q Consensus 202 P~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~DEV-~tG~GRtG~~~a~~~~gi~PDi~~--~gK~l~gG~~pisav~~ 278 (423)
T Consensus 172 ---~G~S-aY~r-~id~~~~reIad~VGA~L~~DmAHiaGL-VA~G~--~p~P~~~AdvVTtTTHKTlrG---PrGG~Il 240 (413)
T COG0112 172 ---AGGS-AYSR-PIDFKRFREIADEVGAYLMVDMAHVAGL-IAGGV--HPNPLPHADVVTTTTHKTLRG---PRGGIIL 240 (413)
T ss_pred ---ECCC-CCCC-CCCHHHHHHHHHHHCCEEEEHHHHHHHH-HHCCC--CCCCCCCCCEEECCCCCCCCC---CCCEEEE
T ss_conf ---7760-3554-4678999999987193677217788888-74566--799987552675775347789---9841798
Q ss_pred CH--HHHHHHCCCCCCCCCCCCCCCCCCCCC---HHHHHCCHHHCCCCC---CCCCCCCHHHHHHHHHHHHHHCCCEEEE
Q ss_conf 40--132100012222222233333222210---011000000000112---3322210026789899997518977777
Q gi|254780488|r 279 SE--EIFDSHLSSDKKKTFFHSSSYTANPIA---CAAALANLQIWEKEP---VIERIKNLERMHADRLSLLKSNKKFVNI 350 (423)
Q Consensus 279 ~~--~i~~~~~~~~~~~~~~h~~T~~gnpl~---~aaa~a~L~~i~~~~---l~~~~~~~g~~l~~~l~~L~~~~~v~~v 350 (423)
T Consensus 241 ~~~eel~kkin~a----VFP--g~qg-gpl~HviAakaVa~~Eal-~p~fk~Ya~qVv~NAkaLAe~l~~~--G~~vvs- 309 (413)
T COG0112 241 TNDEELAKKINSA----VFP--GLQG-GPLMHVIAAKAVAFKEAL-EPEFKEYAKQVVKNAKALAEALKER--GFKVVS- 309 (413)
T ss_pred ECCHHHHHHHHHH----CCC--CCCC-CHHHHHHHHHHHHHHHHC-CHHHHHHHHHHHHHHHHHHHHHHHC--CCEEEC-
T ss_conf 3629999876400----077--6678-827888999999999972-8138999999999999999999976--986715-
Q ss_pred CCCCC---EEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEE----CC-------CEEEECCCCC----CCHHHHHHHHH
Q ss_conf 45533---9999970687666410689999999978859995----19-------9899568987----87999999999
Q gi|254780488|r 351 RQMGT---IVALDFNVQNKGYFFDKNAKLKNFFREKKILIRP----LG-------HIMYLMPPYC----ITATDLDHIYN 412 (423)
Q Consensus 351 rG~Gl---~~~iel~~~~~~~~~~~~~~l~~~l~~~Gil~~~----~g-------n~i~l~Ppl~----it~~eId~~l~ 412 (423)
T Consensus 310 --GgTdnHl~lVDl~~~--~---~~Gk~ae~~L~~~~It~NKN~iP~D~~~p~~tSGIRiGtpa~TtrG~~e~e~~~Ia~ 382 (413)
T COG0112 310 --GGTDNHLVLVDLRSK--G---LTGKKAEAALERAGITVNKNAIPFDPESPFVTSGIRIGTPAVTTRGFGEAEMEEIAD 382 (413)
T ss_pred --CCCCCEEEEEECCCC--C---CCHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCEECCHHHHHCCCCHHHHHHHHH
T ss_conf --886444899972467--9---877899999997097652688999998887876634066888635798899999999
Q ss_pred HHHHHHHHH
Q ss_conf 999999875
Q gi|254780488|r 413 TINEAVDFL 421 (423)
Q Consensus 413 ~l~~aL~~l 421 (423)
T Consensus 383 ~I~~vl~~~ 391 (413)
T COG0112 383 LIADVLDGL 391 (413)
T ss_pred HHHHHHHCC
T ss_conf 999999550