HHsearch alignment for GI: 254780488 and conserved domain: COG0403
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism].
Probab=97.24 E-value=0.022 Score=36.26 Aligned_cols=325 Identities=19% Similarity=0.175 Sum_probs=154.2
Q ss_pred ECHHHHHHHCCCCCCHHHHH-HHHHHHHHHCCHHC-CCCCCH-------HHHHHHHHHHHHCCCCCCCEEECCCCCCHHH
Q ss_conf 41023775367878999999-99999985220102-456897-------8999999999720378641110265420256
Q gi|254780488|r 44 DAISSWWVITHGHRHPIIMN-AIRSASENYDQIIF-SEYTHE-------PAEQLARLLIKIAPLGLQYVFFSDSGSTSIE 114 (423)
Q Consensus 44 D~~~g~~~~~lGh~~~~i~~-a~~~q~~~~~~~~~-~~~~~~-------~~~~la~~l~~~~p~~~~~v~f~~SGsEA~e 114 (423)
T Consensus 75 ~~~sfiG~GyY~~~~P~vI~rni---le~pewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAaAE 151 (450)
T COG0403 75 VFTSFIGAGYYDTYTPPVILRNI---LENPEWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAAAE 151 (450)
T ss_pred HHHHHCCCCCCCCCCCHHHHHHH---HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH
T ss_conf 14542568646871827888876---438542236788863666579999998999999985887445002316769999
Q ss_pred HHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHCCCCC
Q ss_conf 77776430013344332113432025665321123432233333322234454210001222222211110122127751
Q gi|254780488|r 115 VALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQK 194 (423)
Q Consensus 115 ~Alklar~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~ 194 (423)
T Consensus 152 Am~-ma~r~~k---~k~~~~~V~-~~vhpqt~~Vl--------~Tra~~~g~~i~~~~~-------~d~~~l~~~-~~~~ 210 (450)
T COG0403 152 AML-MAKRVTK---KKRNKFLVP-KDVHPQTLDVL--------RTRAEGLGIEIEVVDA-------DDLDDLESA-DDGD 210 (450)
T ss_pred HHH-HHHHHHC---CCCCEEEEC-CCCCHHHHHHH--------HHHCCCCCEEEEEECC-------CHHHHHHHC-CCCC
T ss_conf 999-9987414---767349966-88687799999--------8611257639999564-------225566532-4677
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEEC--CCCCCCCCC-CCCCCCCCCCCCCCCCEE-----ECCCCC
Q ss_conf 134311655432112222333211001101112342000--122124444-555431122334444202-----013443
Q gi|254780488|r 195 IAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLI--ADEVMTGWG-RTGKIFACNHADITPDIL-----CLSKGI 266 (423)
Q Consensus 195 iaavi~EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI--~DEV~tG~G-RtG~~~a~~~~gi~PDi~-----~~gK~l 266 (423)
T Consensus 211 ~~gv~vQy-P-~~~G~~~--~d-~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe~G--------ADIvvG~~QrfGvPm 277 (450)
T COG0403 211 VFGVLVQY-P-NTFGIVE--ED-LRALIEAAHSAGALVIVAADPLALGLLKPPGEFG--------ADIVVGSAQRFGVPM 277 (450)
T ss_pred EEEEEEEC-C-CCCCCCC--HH-HHHHHHHHHHCCCEEEEEECHHHHHCCCCCCCCC--------CCEEEECCCCCCCCC
T ss_conf 37999976-8-8877341--40-9999999863597799982636764557841037--------866973376047776
Q ss_pred CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCHH-HCCCCCCCCC-------------------
Q ss_conf 32223444332240132100012222222233333222210011000000-0001123322-------------------
Q gi|254780488|r 267 TGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQ-IWEKEPVIER------------------- 326 (423)
Q Consensus 267 ~gG~~pisav~~~~~i~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~-~i~~~~l~~~------------------- 326 (423)
T Consensus 278 gfGG-Phag~fA~~~~~~R~mPGRlVG---~S~D~~G~~-A~rLaLQTREQHIRReKATSNICTnQaLlA~~As~y~~~h 352 (450)
T COG0403 278 GFGG-PHAGYFAVKDEFKRQMPGRLVG---VSVDAAGKR-AFRLALQTREQHIRREKATSNICTNQALLALAASMYAVYH 352 (450)
T ss_pred CCCC-CCEEEEEEHHHHHHCCCCCEEE---EEECCCCCC-HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf 7887-5632223758674259984330---464589980-3201287788887640010155489999999999999986
Q ss_pred -----------CCCHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECC-CEE
Q ss_conf -----------21002678989999751897777745533999997068766641068999999997885999519-989
Q gi|254780488|r 327 -----------IKNLERMHADRLSLLKSNKKFVNIRQMGTIVALDFNVQNKGYFFDKNAKLKNFFREKKILIRPLG-HIM 394 (423)
Q Consensus 327 -----------~~~~g~~l~~~l~~L~~~~~v~~vrG~Gl~~~iel~~~~~~~~~~~~~~l~~~l~~~Gil~~~~g-n~i 394 (423)
T Consensus 353 Gp~GLk~iA~r~~~~a~~la~~L~~~~---~g~~~~~~~fFdt~~v~~~~-----~~~~~l~~~~~~~G~~L~~~~~~~~ 424 (450)
T COG0403 353 GPQGLKEIAERIHRLAAYLAAGLKEIG---AGVELVFDHFFDTFTVRVPE-----EVAEALLAAAIAGGINLRRVDADTV 424 (450)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCC---CCEEECCCCCEEEEEEECCH-----HHHHHHHHHHHHCCCCEEEECCCCE
T ss_conf 968899999999999999999876458---86475142422048886463-----6799999999854974145448815
Q ss_pred EECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 956898787999999999999999
Q gi|254780488|r 395 YLMPPYCITATDLDHIYNTINEAV 418 (423)
Q Consensus 395 ~l~Ppl~it~~eId~~l~~l~~aL 418 (423)
T Consensus 425 ~ia~tEt~t~~~i~~l~~~~~~~~ 448 (450)
T COG0403 425 LIALTETTTKEDIDALVAAFGGVN 448 (450)
T ss_pred EEEEECCCCHHHHHHHHHHHHHHC
T ss_conf 999512567899999999975331