HHsearch alignment for GI: 254780488 and conserved domain: COG0520
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones].
Probab=99.33 E-value=1.4e-10 Score=91.57 Aligned_cols=332 Identities=16% Similarity=0.208 Sum_probs=185.3
Q ss_pred CEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHC-CC-----CCCHHHHHHHHHHHHHCCCC-CCCEEECCCCCCH
Q ss_conf 76464102377536787899999999999985220102-45-----68978999999999720378-6411102654202
Q gi|254780488|r 40 DKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIF-SE-----YTHEPAEQLARLLIKIAPLG-LQYVFFSDSGSTS 112 (423)
Q Consensus 40 ~~~lD~~~g~~~~~lGh~~~~i~~a~~~q~~~~~~~~~-~~-----~~~~~~~~la~~l~~~~p~~-~~~v~f~~SGsEA 112 (423)
T Consensus 23 ~vylD~aa~------~~~p~~V~~a~~~~~~~~~an~~r~~~~~~~~~t~~~e~aRe~va~~~~a~~~~eIvft~~tT~a 96 (405)
T COG0520 23 LVYLDNAAT------SQKPQAVLDAVAEYYRRYNANVHRGAHTLAEEATDLYEAAREAVARFLNADSSDEIVFTRGTTEA 96 (405)
T ss_pred CEECCCCCC------CCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCHHHH
T ss_conf 476367656------66788999999999997402457554412799999999999999998199987729995983799
Q ss_pred HHHHHHH-HHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHCC
Q ss_conf 5677776-430013344332113432025665321123432233333322234454210001222222211110122127
Q gi|254780488|r 113 IEVALKM-ALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCS 191 (423)
Q Consensus 113 ~e~Alkl-ar~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~i~~~~~~~~~~~l~~l~~~~~ 191 (423)
T Consensus 97 ln~va~~l~~~-----~~~gdeIv~s~~EH~sn~~pw~~~~-----~~~----Ga~v~~i~~~--~~g~~~~d~~~~~i~ 160 (405)
T COG0520 97 LNLVARGLGRS-----LKPGDEIVVSDLEHHSNIVPWQELA-----KRT----GAKVRVIPLD--DDGLLDLDALEKLIT 160 (405)
T ss_pred HHHHHHHHHHH-----HCCCCEEEEECCCCCCCHHHHHHHH-----HHC----CCEEEEEECC--CCCCCCHHHHHHHCC
T ss_conf 99999970241-----0689989980465520089999999-----875----9689998418--999728899986469
Q ss_pred CC-CEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC---CCCEEECC--CC
Q ss_conf 75-11343116554321122223332110011011123420001221244445554311223344---44202013--44
Q gi|254780488|r 192 TQ-KIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADI---TPDILCLS--KG 265 (423)
Q Consensus 192 ~~-~iaavi~EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~gi---~PDi~~~g--K~ 265 (423)
T Consensus 161 ~~Tklva--is-~vSn~tG~~~p----v~~I~~la~~~ga~v~VDaaq~-~~-------h~~idv~~l~~Df~afsgHKw 225 (405)
T COG0520 161 PKTKLVA--LS-HVSNVTGTVNP----VKEIAELAHEHGALVLVDAAQA-AG-------HLPIDVQELGCDFLAFSGHKW 225 (405)
T ss_pred CCCEEEE--EE-CCCCCCCCCCC----HHHHHHHHHHCCCEEEEECCCC-CC-------CCCCCHHHCCCCEEEECCCCC
T ss_conf 9944999--96-64167554040----9999999998499899977133-47-------566885561898999767432
Q ss_pred CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCC------CCCCCCC----------CCCCHHHHHCCHHHCCCCC---CCCC
Q ss_conf 3322234443322401321000122222222------3333322----------2210011000000000112---3322
Q gi|254780488|r 266 ITGGALPLAATLCSEEIFDSHLSSDKKKTFF------HSSSYTA----------NPIACAAALANLQIWEKEP---VIER 326 (423)
Q Consensus 266 l~gG~~pisav~~~~~i~~~~~~~~~~~~~~------h~~T~~g----------npl~~aaa~a~L~~i~~~~---l~~~ 326 (423)
T Consensus 226 l~g-P~GiGvLy~r~~~l~~l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~~ 304 (405)
T COG0520 226 LLG-PTGIGVLYVRKELLEELEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEAH 304 (405)
T ss_pred CCC-CCCEEEEEECHHHHHHCCCCCCCCCCEEECCCCCCCEECCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 579-9852999986655843789777887244014455530156415315578437889869999999998579999999
Q ss_pred CCCHHHHHHHHHHHHHHCCCEE--EE--CCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECCCE---------
Q ss_conf 2100267898999975189777--77--4553399999706876664106899999999788599951998---------
Q gi|254780488|r 327 IKNLERMHADRLSLLKSNKKFV--NI--RQMGTIVALDFNVQNKGYFFDKNAKLKNFFREKKILIRPLGHI--------- 393 (423)
Q Consensus 327 ~~~~g~~l~~~l~~L~~~~~v~--~v--rG~Gl~~~iel~~~~~~~~~~~~~~l~~~l~~~Gil~~~~gn~--------- 393 (423)
T Consensus 305 e~~L~~~~~~~L~~~---~~v~i~g~~~~~r~~~vsF~v~~~-------~~~dv~~~L~~~gI~vr~g~~ca~p~~~~~~ 374 (405)
T COG0520 305 ERELTEYLLEGLSEL---PGVEIYGPPDADRGGIVSFNVKGI-------HPHDVATLLDEKGIAVRAGHHCAQPLHRLLG 374 (405)
T ss_pred HHHHHHHHHHHHHCC---CCEEEECCCCCCCCCEEEEEECCC-------CHHHHHHHHHHCCEEEEECCCCCHHHHHHCC
T ss_conf 999999999998548---984996466346774699997895-------9899999998678699825644326787537
Q ss_pred ----EEECCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf ----99568987879999999999999998
Q gi|254780488|r 394 ----MYLMPPYCITATDLDHIYNTINEAVD 419 (423)
Q Consensus 394 ----i~l~Ppl~it~~eId~~l~~l~~aL~ 419 (423)
T Consensus 375 ~~~~iR~S~~~YNt~edid~l~~aL~~~~~ 404 (405)
T COG0520 375 VDATIRASLHLYNTEEDVDRLLEALKKALA 404 (405)
T ss_pred CCCCEEEEEECCCCHHHHHHHHHHHHHHHC
T ss_conf 777579997425999999999999998741