HHsearch alignment for GI: 254780488 and conserved domain: COG1167
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism].
Probab=99.22 E-value=1.8e-09 Score=84.03 Aligned_cols=343 Identities=18% Similarity=0.196 Sum_probs=205.9
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHCCH-----HCCCCCCHHHHHHHHHHH-HH-CCCCCCCEEECCCC
Q ss_conf 898764641023775367878999999999999852201-----024568978999999999-72-03786411102654
Q gi|254780488|r 37 ENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQI-----IFSEYTHEPAEQLARLLI-KI-APLGLQYVFFSDSG 109 (423)
Q Consensus 37 ~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~q~~~~~~~-----~~~~~~~~~~~~la~~l~-~~-~p~~~~~v~f~~SG 109 (423)
T Consensus 86 ~~~~~~i~f~~g~p~~~-~fp~~~~~~~~~~~~~~~~~~~~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~ 164 (459)
T COG1167 86 EDDPSVIDFAGGLPDPS-LFPLEALRRALARVLRNYGASLALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGA 164 (459)
T ss_pred CCCCCCCCCCCCCCCCH-HCCHHHHHHHHHHHHHHCCHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHEEECCCH
T ss_conf 57875547688998810-18889999999999850561233226876888999999999999974998883038980649
Q ss_pred CCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHH
Q ss_conf 20256777764300133443321134320256653211234322333333222344542100012222222111101221
Q gi|254780488|r 110 STSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKH 189 (423)
Q Consensus 110 sEA~e~Alklar~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~i~~~~~~~~~~~l~~l~~~ 189 (423)
T Consensus 165 q~al~l~~~~l~-------~pGd~v~vE~PtY~~~~-------------~~~~~~g~~~~~vp~d---~~G~~~e~le~~ 221 (459)
T COG1167 165 QQALDLLLRLLL-------DPGDTVLVEDPTYPGAL-------------QALEALGARVIPVPVD---EDGIDPEALEEA 221 (459)
T ss_pred HHHHHHHHHHHC-------CCCCEEEECCCCHHHHH-------------HHHHHCCCCEEEECCC---CCCCCHHHHHHH
T ss_conf 999999999847-------99999998999828999-------------9999869947860678---889897999999
Q ss_pred CCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCC----CCCCCCCCCCCCEEECCCC
Q ss_conf 277511343116554321122223332110011011123420001221244445554----3112233444420201344
Q gi|254780488|r 190 CSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGK----IFACNHADITPDILCLSKG 265 (423)
Q Consensus 190 ~~~~~iaavi~EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~DEV~tG~GRtG~----~~a~~~~gi~PDi~~~gK~ 265 (423)
T Consensus 222 ~~~~~~k~~y~~P~~qNPtG~tms~~r-R~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~~l~~ld~~~rViy~gSFSK~ 300 (459)
T COG1167 222 LAQWKPKAVYVTPTFQNPTGVTMSLER-RKALLALAEKYDVLIIEDDYYGELRYDGPPPPPLKALDAPGRVIYLGSFSKT 300 (459)
T ss_pred HHCCCCCEEEECCCCCCCCCCCCCHHH-HHHHHHHHHHCCCEEEEECCCHHHCCCCCCCCCHHHHCCCCCEEEECCCHHH
T ss_conf 850697289978896388987459999-9999999997598799867743321588998345762899978999132665
Q ss_pred CCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCHHHHHHHH----HHHH
Q ss_conf 332223444332240132100012222222233333222210011000000000112332221002678989----9997
Q gi|254780488|r 266 ITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADR----LSLL 341 (423)
Q Consensus 266 l~gG~~pisav~~~~~i~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~----l~~L 341 (423)
T Consensus 301 l~Pg-lRlG~vv~p~~~~~~~~~~k------~~~~~~~s~~~Q~~la~---~l~~G~~~~hl~~lR~~y~~rr~~l~~~L 370 (459)
T COG1167 301 LAPG-LRLGYVVAPPELIEKLLRLK------QAADLGPSSLSQAALAA---FLLSGHYDRHLRRLRREYARRRDALLEAL 370 (459)
T ss_pred HCCC-CCEEEEECCHHHHHHHHHHH------HHHCCCCCHHHHHHHHH---HHHCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 1467-55499972999999999998------76256998999999999---99728599999999999999999999999
Q ss_pred HHCCC--EE-EECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEC----------CCEEEECCCCCCCHHHHH
Q ss_conf 51897--77-774553399999706876664106899999999788599951----------998995689878799999
Q gi|254780488|r 342 KSNKK--FV-NIRQMGTIVALDFNVQNKGYFFDKNAKLKNFFREKKILIRPL----------GHIMYLMPPYCITATDLD 408 (423)
Q Consensus 342 ~~~~~--v~-~vrG~Gl~~~iel~~~~~~~~~~~~~~l~~~l~~~Gil~~~~----------gn~i~l~Ppl~it~~eId 408 (423)
T Consensus 371 ~~~~~~~~~~~~p~gG~flwl~l~~~~------~~~~l~~~a~~~gv~i~~~g~~f~~~~~~~~~~Rl~~s~-~~~e~i~ 443 (459)
T COG1167 371 AEYLPELATWTRPEGGLFLWLELPEGI------DARELLAAALEKGVVVTPLGSAFSADGDPRNGLRLSFSS-PSEEEIE 443 (459)
T ss_pred HHHCCCCEEEECCCCEEEEEEECCCCC------CHHHHHHHHHHCCCEEECCCCCCCCCCCCCCEEEEECCC-CCHHHHH
T ss_conf 974787637726995589999869988------889999999986997945886635789889828998898-9999999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999875
Q gi|254780488|r 409 HIYNTINEAVDFL 421 (423)
Q Consensus 409 ~~l~~l~~aL~~l 421 (423)
T Consensus 444 ~gi~~l~~~~~~~ 456 (459)
T COG1167 444 EGIKRLAALLREA 456 (459)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999976