HHsearch alignment for GI: 254780488 and conserved domain: COG1921
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism].
Probab=92.49 E-value=0.85 Score=25.55 Aligned_cols=242 Identities=17% Similarity=0.185 Sum_probs=111.0
Q ss_pred EECHHHHHHHCCCCC--CHHHHHHHHHHHHHHCCH---HCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHH
Q ss_conf 641023775367878--999999999999852201---024568978999999999720378641110265420256777
Q gi|254780488|r 43 IDAISSWWVITHGHR--HPIIMNAIRSASENYDQI---IFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVAL 117 (423)
Q Consensus 43 lD~~~g~~~~~lGh~--~~~i~~a~~~q~~~~~~~---~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~SGsEA~e~Al 117 (423)
T Consensus 23 iN~~G~v~~t~lG~s~~~~e~iea~~~~~~~~v~Le~~l~~g~~~~R~~~~~~~~~~~~--~aea~~ivnnn~aAVll~~ 100 (395)
T COG1921 23 INAIGTVLMTNLGRSLYSPEAIEAMKEAMRAPVELETDLKTGKRGARLTELAELLCGLT--GAEAAAIVNNNAAAVLLTL 100 (395)
T ss_pred HHHHHHHEECCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHCCC--CHHHEEEECCCHHHHHHHH
T ss_conf 52432210012787667989999999985054303564012313577799999983664--4033256788289999987
Q ss_pred HHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC------CCCCCEECCCCCCCCCCCCHHHHHCC
Q ss_conf 764300133443321134320256653211234322333333222344------54210001222222211110122127
Q gi|254780488|r 118 KMALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLL------FDVETIPFPHHNEEQKTLDDLEKHCS 191 (423)
Q Consensus 118 klar~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~------~~~~~i~~~~~~~~~~~l~~l~~~~~ 191 (423)
T Consensus 101 ~a-------l~~~~EvVis~g~----------------lV~-gg~~~v~d~~~~aG~~l~EvG~tn~--t~~~d~~~AIn 154 (395)
T COG1921 101 NA-------LAEGKEVVVSRGE----------------LVE-GGAFRVPDIIRLAGAKLVEVGTTNR--THLKDYELAIN 154 (395)
T ss_pred HH-------HCCCCEEEEECCC----------------CCC-CCCCCHHHHHHHCCCEEEEECCCCC--CCHHHHHHHHC
T ss_conf 63-------2057717997131----------------156-8899866799971977998156576--77888998854
Q ss_pred CCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCC-CCCCCCCEEECC--CCCCC
Q ss_conf 751134311655432112222333211001101112342000122124444555431122-334444202013--44332
Q gi|254780488|r 192 TQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACN-HADITPDILCLS--KGITG 268 (423)
Q Consensus 192 ~~~iaavi~EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~~-~~gi~PDi~~~g--K~l~g 268 (423)
T Consensus 155 e~t--a~llk-V~s~~~~--f~~~l~~~~l~~ia~~~~lpvivD~-aSg~-~v~~e~~l~~~la~GaDLV~~SgdKll-g 226 (395)
T COG1921 155 ENT--ALLLK-VHSSNYG--FTGMLSEEELVEIAHEKGLPVIVDL-ASGA-LVDKEPDLREALALGADLVSFSGDKLL-G 226 (395)
T ss_pred CCC--EEEEE-EEECCCC--CCCCCCHHHHHHHHHHCCCCEEEEC-CCCC-CCCCCCCHHHHHHCCCCEEEEECCHHC-C
T ss_conf 587--05899-9503666--1464559999999987699779966-7763-003554456888607978997540112-7
Q ss_pred CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCC-CCCCC
Q ss_conf 223444332240132100012222222233333222210011000000000112-33222
Q gi|254780488|r 269 GALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEP-VIERI 327 (423)
Q Consensus 269 G~~pisav~~~~~i~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~-l~~~~ 327 (423)
T Consensus 227 G-PqaGii~GkKelI~~lq~~----~l--~Ralrv~K~tla~l~~aLe~y~~~~~~~~~~ 279 (395)
T COG1921 227 G-PQAGIIVGKKELIEKLQSH----PL--KRALRVDKETLAALEAALELYLQPEILGERL 279 (395)
T ss_pred C-CCCCEEECHHHHHHHHHHH----HH--HHHHHCCCHHHHHHHHHHHHHCCCHHHHHHH
T ss_conf 9-8543374249999999762----13--3433158276899999999870801344355