HHsearch alignment for GI: 254780488 and conserved domain: COG2008
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism].
Probab=99.45 E-value=4e-13 Score=108.77 Aligned_cols=316 Identities=17% Similarity=0.211 Sum_probs=166.2
Q ss_pred EECHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHHH-HHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHH
Q ss_conf 64102377536787899999999999985220102456897899-99999997203786411102654202567777643
Q gi|254780488|r 43 IDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAE-QLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMAL 121 (423)
Q Consensus 43 lD~~~g~~~~~lGh~~~~i~~a~~~q~~~~~~~~~~~~~~~~~~-~la~~l~~~~p~~~~~v~f~~SGsEA~e~Alklar 121 (423)
T Consensus 2 ~~f~SDn~~g----~~~~m~eam~~a~~----~~~~~YG~D~~~~~~e~~~ae~~g--~~a~~Fv~sGT~aN~lal~~~~ 71 (342)
T COG2008 2 IDFRSDNVAG----PTPEMREALAAANA----VGDDVYGEDPTTNALEQRIAELFG--KEAALFVPSGTQANQLALAAHC 71 (342)
T ss_pred CCCCCCCCCC----CCHHHHHHHHHCCC----CCCCCCCCCHHHHHHHHHHHHHHC--CCEEEEECCCCHHHHHHHHHHC
T ss_conf 7355576678----79999999985524----578777888899999999999857--7449992684388899999864
Q ss_pred HCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCC-CCCCCEECCCCCCCCCCCCHHHHHCCCCC-----E
Q ss_conf 00133443321134320256653211234322333333222344-54210001222222211110122127751-----1
Q gi|254780488|r 122 GFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLL-FDVETIPFPHHNEEQKTLDDLEKHCSTQK-----I 195 (423)
Q Consensus 122 ~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~-~~~~~i~~~~~~~~~~~l~~l~~~~~~~~-----i 195 (423)
T Consensus 72 ~------~~-~~vi~~~~a-Hi~~------------~E~Ga~~~~~~~~~~~~~~g~~Gklt~e~v~~~i~~~d~~~~~~ 131 (342)
T COG2008 72 Q------PG-ESVICHETA-HIYT------------DECGAPEFFGGGQKLPIVPGADGKLTPEDVEAAIRPDDIHHAPT 131 (342)
T ss_pred C------CC-CEEEEECCC-CCEE------------CCCCCHHHHCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCCCCC
T ss_conf 8------99-769985253-1202------------35675888738854304798778739999997636777655887
Q ss_pred EEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC-------CCCEE--ECCCCC
Q ss_conf 343116554321122223332110011011123420001221244445554311223344-------44202--013443
Q gi|254780488|r 196 AAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADI-------TPDIL--CLSKGI 266 (423)
Q Consensus 196 aavi~EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~gi-------~PDi~--~~gK~l 266 (423)
T Consensus 132 ~~~~~e~-~~te~Gt-Vy~l~el~~i~~~~k~~~l~LHmDG----A-R~~n--A~valg~~~~~~~~~~D~v~~~~tK-- 200 (342)
T COG2008 132 PLAVLEN-TATEGGT-VYPLDELEAISAVCKEHGLPLHMDG----A-RLAN--ALVALGVALKTIKSYVDSVSFCLTK-- 200 (342)
T ss_pred CEEEEEE-CCCCCCE-ECCHHHHHHHHHHHHHHCCCEEECH----H-HHHH--HHHHCCCCHHHHHHHCCEEEEECCC--
T ss_conf 5079861-3677866-6489999999999998099544040----8-8988--9987398889987428899991314--
Q ss_pred CCCCCCCCCCCC-CHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCC----CCCCCHHHHHHHHHHHH
Q ss_conf 322234443322-4013210001222222223333322221001100000000011233----22210026789899997
Q gi|254780488|r 267 TGGALPLAATLC-SEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVI----ERIKNLERMHADRLSLL 341 (423)
Q Consensus 267 ~gG~~pisav~~-~~~i~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~----~~~~~~g~~l~~~l~~L 341 (423)
T Consensus 201 -~g~~~~gAiv~gn~~~~~~a~~~rK~----~Ggl~~k~r~laA~~~~~l----~~~~~~~~~~Han~mA~~La~~~~~~ 271 (342)
T COG2008 201 -GGGAPVGAIVFGNRDFAKRARRWRKR----AGGLMRKARFLAAQGLYAL----EDDVWRLAADHANAMAARLAEGLEAK 271 (342)
T ss_pred -CCCCEEEEEEECCHHHHHHHHHHHHH----HCCCHHHHHHHHHHHHHHH----HCCHHHHHHHHHHHHHHHHHHHHHHC
T ss_conf -77521325897389999998999998----6562766548999999997----31588888788899999999765326
Q ss_pred HHCCCEE---EECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECCCEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 5189777---7745533999997068766641068999999997885999519989956898787999999999999999
Q gi|254780488|r 342 KSNKKFV---NIRQMGTIVALDFNVQNKGYFFDKNAKLKNFFREKKILIRPLGHIMYLMPPYCITATDLDHIYNTINEAV 418 (423)
Q Consensus 342 ~~~~~v~---~vrG~Gl~~~iel~~~~~~~~~~~~~~l~~~l~~~Gil~~~~gn~i~l~Ppl~it~~eId~~l~~l~~aL 418 (423)
T Consensus 272 ---~G~~~~~~~~tN~vf--~~l--~~---~~i~~l~~~~~~~~~~~~~~~~~~~vRfvts~a~~~edv~~~~~~~~~~~ 341 (342)
T COG2008 272 ---PGVKLAFPVETNMVF--VRL--PE---SAIEALRLAGALFYRGVLIGAHGEIVRFVTSWATSEEDVDELVAAIKALL 341 (342)
T ss_pred ---CCCEECCCCCCCEEE--EEC--CH---HHHHHHHHHCHHHEEEEECCCCCCEEEEEEECCCCHHHHHHHHHHHHHHH
T ss_conf ---894343677662799--977--76---78899975152120012215777558998502499999999999999964