HHsearch alignment for GI: 254780488 and conserved domain: KOG1401
>KOG1401 consensus.
Probab=100.00 E-value=0 Score=598.52 Aligned_cols=396 Identities=27% Similarity=0.402 Sum_probs=337.7
Q ss_pred CCCCCCCHHHCCC--CCCCCEEEEEEEEEEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCH
Q ss_conf 7885434122767--87786468862132899689876464102377536787899999999999985220102456897
Q gi|254780488|r 6 SNYPIWHPFVQHF--CNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHE 83 (423)
Q Consensus 6 ~~~~~~~~~~~~~--~~~~p~~i~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~q~~~~~~~~~~~~~~~ 83 (423)
T Consensus 20 ~~~~i~~~~~~~~~t~~~~pv~~~~gkg~kl~D~~g~EyiD~~ssw~~~~~Ghanpev~ral~~q~~k~~hs~~~~~t~e 99 (433)
T KOG1401 20 SMPGIVEEKTRIVSTYARYPVVIESGKGSKLFDPDGKEYIDFTSSWAVTILGHANPEVARALAEQAKKLGHSSNGYFTLE 99 (433)
T ss_pred CCCCCCCCCEEEEECCCCCCEEEECCEEEEEECCCCCEEEEECCCHHCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCHH
T ss_conf 26665556517861046685466445134642688664413001100135588998999999998755344047532088
Q ss_pred HHHHHHHHHHHHCC-CCCCCEEECCCCCCHHHHHHHHHHHCCCC-CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 89999999997203-78641110265420256777764300133-44332113432025665321123432233333322
Q gi|254780488|r 84 PAEQLARLLIKIAP-LGLQYVFFSDSGSTSIEVALKMALGFFNN-NNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSY 161 (423)
Q Consensus 84 ~~~~la~~l~~~~p-~~~~~v~f~~SGsEA~e~Alklar~~~~~-~~~~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~ 161 (423)
T Consensus 100 -av~l~~~l~~~~~~~~~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgals~~~~s~y~~~~ 178 (433)
T KOG1401 100 -AVELEEVLSAVLGKGSAERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGALSVTGNSKYGLPF 178 (433)
T ss_pred -HHHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHCCCCCCCCC
T ss_conf -8999999974235687417999569728999999999986353477664128998567577623666752346668888
Q ss_pred CCCCCCCCCEECCCCCCCCCCCCHHHHHC--CCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCC
Q ss_conf 23445421000122222221111012212--7751134311655432112222333211001101112342000122124
Q gi|254780488|r 162 EPLLFDVETIPFPHHNEEQKTLDDLEKHC--STQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMT 239 (423)
Q Consensus 162 ~p~~~~~~~i~~~~~~~~~~~l~~l~~~~--~~~~iaavi~EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~DEV~t 239 (423)
T Consensus 179 ~p~~p~v~~~~ynd-------~t~l~k~~e~~~~~IaAvIvEP-iqGaGG~~p~~peFl~~l~k~C~~~~vl~I~DEV~t 250 (433)
T KOG1401 179 DPIAPDVVTAEYND-------STALEKLFESHKGEIAAVIVEP-IQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQT 250 (433)
T ss_pred CCCCCCEEEECCCC-------HHHHHHHHHHCCCCEEEEEEEC-CCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHH
T ss_conf 77798535305588-------9999999984788568999713-457888656988999999999861596699603431
Q ss_pred CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCC
Q ss_conf 44455543112233444420201344332223444332240132100012222222233333222210011000000000
Q gi|254780488|r 240 GWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWE 319 (423)
Q Consensus 240 G~GRtG~~~a~~~~gi~PDi~~~gK~l~gG~~pisav~~~~~i~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~ 319 (423)
T Consensus 251 G~gR~g~~~a~e~~~~~PDI~t~aK~L~gG-lPigA~~v~~kV~~~i~~~~~---l~hg~Tf~gnpLacs~~~~~l~~l~ 326 (433)
T KOG1401 251 GLGRLGYGWAQEYFGVTPDITTVAKPLGGG-LPIGATGVRDKVAEMISPGDH---LYHGGTFSGNPLACSAGIKVLDELK 326 (433)
T ss_pred CCCCCCHHHHHHHHCCCCCEEEEHHHCCCC-CEEEEEEEHHHHHHHCCCCCC---CCCCCCCCCCHHHHHHHHHHHHHHC
T ss_conf 765355277888858697602310203688-515788655778865188886---5557665788055548899999871
Q ss_pred CCCCCCCCCCHHHHHHHHHHHH-HHCCC-EEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECC-----C
Q ss_conf 1123322210026789899997-51897-777745533999997068766641068999999997885999519-----9
Q gi|254780488|r 320 KEPVIERIKNLERMHADRLSLL-KSNKK-FVNIRQMGTIVALDFNVQNKGYFFDKNAKLKNFFREKKILIRPLG-----H 392 (423)
Q Consensus 320 ~~~l~~~~~~~g~~l~~~l~~L-~~~~~-v~~vrG~Gl~~~iel~~~~~~~~~~~~~~l~~~l~~~Gil~~~~g-----n 392 (423)
T Consensus 327 ~pe~~k~vs~~~k~L~~~l~e~~~~~~~~i~g~~grgl~ig~~~~~p~~~--------~~d~~~~~~ll~~~~~~~~~~~ 398 (433)
T KOG1401 327 DPETLKNVSKIGKELRKLLDEYLKKTPNSICGGVGRGLVIGFEFEGPVYK--------FADAAREQGLLILTLGKGLLEE 398 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEEEEEEEEECCHHH--------HHHHHHHHHHHHHHHHCCCCCC
T ss_conf 88999989888789999999986479874367752588998998305054--------3013445568888763246225
Q ss_pred EEEECC--CCCCC--HHHHHHHHHHHHHHHHHHC
Q ss_conf 899568--98787--9999999999999998755
Q gi|254780488|r 393 IMYLMP--PYCIT--ATDLDHIYNTINEAVDFLE 422 (423)
Q Consensus 393 ~i~l~P--pl~it--~~eId~~l~~l~~aL~~le 422 (423)
T Consensus 399 gv~i~P~~~l~~~~~~E~i~~~l~i~~k~l~~l~ 432 (433)
T KOG1401 399 GVRIAPIYLLTVEHTPEVIQRLLTILEKVLSALN 432 (433)
T ss_pred EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 1799555201056868999999999999998742