HHsearch alignment for GI: 254780488 and conserved domain: PRK00854
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed.
Probab=100.00 E-value=0 Score=727.75 Aligned_cols=379 Identities=23% Similarity=0.408 Sum_probs=343.3
Q ss_pred CCCCCCCEEEEEEEEEEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHC
Q ss_conf 67877864688621328996898764641023775367878999999999999852201024568978999999999720
Q gi|254780488|r 17 HFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAEQLARLLIKIA 96 (423)
Q Consensus 17 ~~~~~~p~~i~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~ 96 (423)
T Consensus 21 ~~y~p~Pivi~ra~G~~l~D~dG~~ylD~~~g~~~~~lGh~~p~v~~Ai~~q~~~l~~~-~~~~~~~~~~~l~~~l~~~~ 99 (404)
T PRK00854 21 HNYKPLDVVLTRGEGVWVWDTDGRRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRLTLT-SRAFRNDQLAPLYEELAALT 99 (404)
T ss_pred CCCCCCCEEEEEEECCEEEECCCCEEEECCCCHHHHHHCCCCHHHHHHHHHHHHHCCCC-CCCCCCHHHHHHHHHHHHCC
T ss_conf 88898984799857599997999999882629997754279799999999998567865-55426579999999997403
Q ss_pred CCCCCCEEECCCCCCHHHHHHHHHHHCC-CCC--CCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC
Q ss_conf 3786411102654202567777643001-334--4332113432025665321123432233333322234454210001
Q gi|254780488|r 97 PLGLQYVFFSDSGSTSIEVALKMALGFF-NNN--NMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPF 173 (423)
Q Consensus 97 p~~~~~v~f~~SGsEA~e~Alklar~~~-~~~--~~~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~i~~ 173 (423)
T Consensus 100 --~~~~v~f~~SGsEAve~AiklAr~~~~~~~g~~tgr~~ii~~~~~yHG~t~~~~s~s~~~~~~~~~~~~~~~~~~~p~ 177 (404)
T PRK00854 100 --GSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGGFGPFAPGFRVVPF 177 (404)
T ss_pred --CCCEEEECCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECC
T ss_conf --768488558779999999999999876503787898559996456678601354346774335688899998155056
Q ss_pred CCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCC
Q ss_conf 22222221111012212775113431165543211222233321100110111234200012212444455543112233
Q gi|254780488|r 174 PHHNEEQKTLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHA 253 (423)
Q Consensus 174 ~~~~~~~~~l~~l~~~~~~~~iaavi~EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~ 253 (423)
T Consensus 178 ~d-------~~~l~~~~~-~~~aAviiEP-iqg~gG~~~~~~~yl~~lr~lc~~~gillI~DEV~TGfGRtG~~fa~e~~ 248 (404)
T PRK00854 178 GD-------AAALEAAIT-PNTVAFLIEP-IQGEAGVIIPPAGYFRRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHE 248 (404)
T ss_pred CC-------HHHHHHHHC-CCEEEEEEEC-CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHC
T ss_conf 66-------899998639-8748999917-75778961799899999999999707644575000178635574145542
Q ss_pred CCCCCEEECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCHHHH
Q ss_conf 44442020134433222344433224013210001222222223333322221001100000000011233222100267
Q gi|254780488|r 254 DITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERM 333 (423)
Q Consensus 254 gi~PDi~~~gK~l~gG~~pisav~~~~~i~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~g~~ 333 (423)
T Consensus 249 gv~PDii~~gKgl~gG~~Pl~av~~~~~i~~~~~~------~~h~~T~~gnpla~aaa~a~l~~i~~e~l~~~~~~~g~~ 322 (404)
T PRK00854 249 GIEADVTLIGKALSGGFYPVSAVLSNSEVLGVLRP------GQHGSTFGGNPLACAVARAALRVLVEEGMIENAAEQGAY 322 (404)
T ss_pred CCCCCEEEECCCCCCCCCCCCEEECCHHHHHHCCC------CCCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_conf 48979897564445887653202047999950679------887788898989999999999999865899999999999
Q ss_pred HHHHHHHHHHCCCEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEC-CCEEEECCCCCCCHHHHHHHHH
Q ss_conf 898999975189777774553399999706876664106899999999788599951-9989956898787999999999
Q gi|254780488|r 334 HADRLSLLKSNKKFVNIRQMGTIVALDFNVQNKGYFFDKNAKLKNFFREKKILIRPL-GHIMYLMPPYCITATDLDHIYN 412 (423)
Q Consensus 334 l~~~l~~L~~~~~v~~vrG~Gl~~~iel~~~~~~~~~~~~~~l~~~l~~~Gil~~~~-gn~i~l~Ppl~it~~eId~~l~ 412 (423)
T Consensus 323 l~~~L~~l~~-~~i~~VRG~Glm~gve~~~~~-----~~~~~~~~~~~~~Gll~~~~~~~~ir~~PPL~it~~eid~~l~ 396 (404)
T PRK00854 323 FLEGLRAIRG-NIVREVRGRGLMLAVELEPEA-----GGARQYCEALKARGLLAKDTHDHTIRLAPPLVITREQVDWAVS 396 (404)
T ss_pred HHHHHHHCCC-CCEEEEEECCEEEEEEEECCH-----HHHHHHHHHHHHCCEEECCCCCCEEEEECCCCCCHHHHHHHHH
T ss_conf 9999985048-972766444559999985566-----7799999999979959874899989997995789999999999
Q ss_pred HHHHHHH
Q ss_conf 9999998
Q gi|254780488|r 413 TINEAVD 419 (423)
Q Consensus 413 ~l~~aL~ 419 (423)
T Consensus 397 ~l~~~La 403 (404)
T PRK00854 397 QIAKVLA 403 (404)
T ss_pred HHHHHHC
T ss_conf 9999966