HHsearch alignment for GI: 254780488 and conserved domain: PRK04311
>PRK04311 selenocysteine synthase; Provisional.
Probab=98.19 E-value=0.00084 Score=45.83 Aligned_cols=322 Identities=16% Similarity=0.173 Sum_probs=158.0
Q ss_pred HCCCCCC--HHHHHHHHHHHHHHCCH----HCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHCCC
Q ss_conf 3678789--99999999999852201----02456897899999999972037864111026542025677776430013
Q gi|254780488|r 52 ITHGHRH--PIIMNAIRSASENYDQI----IFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFN 125 (423)
Q Consensus 52 ~~lGh~~--~~i~~a~~~q~~~~~~~----~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~SGsEA~e~Alklar~~~~ 125 (423)
T Consensus 93 TNLGRapL~~~a~~~v~~~~~~YsnLE~dL~~G~RG~R-~~~v~~ll~~lt--gaE~a~vVNNNAaAv~L~l~~l----- 164 (465)
T PRK04311 93 TNLGRALLSEAAIEAVTEAARGYSNLEYDLATGKRGSR-DRALAALLCELT--GAEDALVVNNNAAAVLLALNAL----- 164 (465)
T ss_pred CCCCCCCCCHHHHHHHHHHHCCCCHHHHECCCCCCCCC-HHHHHHHHHHHH--CCCEEEEECCCHHHHHHHHHHH-----
T ss_conf 66777778899999999996287215522013889870-899999999854--9873799828489999999986-----
Q ss_pred CCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHCCCCCEEEEEC-CCCC
Q ss_conf 344332113432025665321123432233333322234454210001222222211110122127751134311-6554
Q gi|254780488|r 126 NNNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLV-EPLI 204 (423)
Q Consensus 126 ~~~~~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~iaavi~-EP~i 204 (423)
T Consensus 165 --a~gkEviVSRGe--------lvEIGG--sFRiPdim~~sGa~L~EVGtTN--rT~l~DY~~AI~~~-Ta~llkvH~-- 227 (465)
T PRK04311 165 --AAGKEVIVSRGE--------LVEIGG--AFRIPDVMRQAGAKLVEVGTTN--RTHLRDYEDAINEN-TALLLKVHT-- 227 (465)
T ss_pred --HCCCEEEEECCC--------EEEECC--CCCCHHHHHHCCCEEEECCCCC--CCCHHHHHHHCCCC-CEEEEEEEC--
T ss_conf --279859996453--------565267--6562789986598887437678--88879999864956-548999956--
Q ss_pred CCCCCCC--CCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCC------------CCCCEEECC--CCCCC
Q ss_conf 3211222--2333211001101112342000122124444555431122334------------444202013--44332
Q gi|254780488|r 205 LGAGGMQ--TYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHAD------------ITPDILCLS--KGITG 268 (423)
Q Consensus 205 ~~~gG~~--~~~~~~l~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~g------------i~PDi~~~g--K~l~g 268 (423)
T Consensus 228 -SN~~i~GFt~~v~-~~eL~~l~~~~~ip~~~Dl-----G-SG~l~~~~~~gl~~Ep~v~~~l~~GaDLVtFSGDKLL-G 298 (465)
T PRK04311 228 -SNYRIVGFTKEVS-EAELAALGKEHGLPVVVDL-----G-SGSLVDLSQYGLPDEPTVQELLAAGVDLVTFSGDKLL-G 298 (465)
T ss_pred -CCCCCCCCCCCCC-HHHHHHHHHHCCCCEEEEC-----C-CCCCCCCCCCCCCCCCCHHHHHHCCCCEEEEECCCCC-C
T ss_conf -8765467468899-9999999987599279988-----8-7521365312699999889999729988998554014-7
Q ss_pred CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCC-CCCC-------------CCCHHHHH
Q ss_conf 223444332240132100012222222233333222210011000000000112-3322-------------21002678
Q gi|254780488|r 269 GALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEP-VIER-------------IKNLERMH 334 (423)
Q Consensus 269 G~~pisav~~~~~i~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~-l~~~-------------~~~~g~~l 334 (423)
T Consensus 299 G-PQAGIIvGkk~lI~~lkkn----PL~--RAlRvDKltLaaLeaTL~~Yl~~~~~~~~IP~l~mLt~~~~~L~~rA~~l 371 (465)
T PRK04311 299 G-PQAGIIVGKKELIERLKKH----PLK--RALRVDKLTLAALEATLRLYLNPERLAEKIPTLRLLTRSPEELRARAERL 371 (465)
T ss_pred C-CCCCEEECHHHHHHHHHHC----CCH--HHHCCCHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHCCCHHHHHHHHHHH
T ss_conf 9-8543374009999999868----761--42325999999999999999592100011768998759999999999999
Q ss_pred HHHHHHHHHCCC--EE-E--ECCCCCE-------EEEEECCCCCCCCCHHHHHHHHHHHHC--CEEEEECCCEEEECCCC
Q ss_conf 989999751897--77-7--7455339-------999970687666410689999999978--85999519989956898
Q gi|254780488|r 335 ADRLSLLKSNKK--FV-N--IRQMGTI-------VALDFNVQNKGYFFDKNAKLKNFFREK--KILIRPLGHIMYLMPPY 400 (423)
Q Consensus 335 ~~~l~~L~~~~~--v~-~--vrG~Gl~-------~~iel~~~~~~~~~~~~~~l~~~l~~~--Gil~~~~gn~i~l~Ppl 400 (423)
T Consensus 372 ~~~l~~~~~~~~v~i~~~~s~vGGGslP~~~lpS~~v~i~~~~-----~s~~~L~~~LR~~~~PII~RI~~d~~~LDlR- 445 (465)
T PRK04311 372 AAALKAALGEFAVSVVPSFSQVGGGSLPVDRLPSAALTLTPKG-----RSLEALAARLRLLPPPVIGRIEDGRLLLDLR- 445 (465)
T ss_pred HHHHHHHCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEECCC-----CCHHHHHHHHHCCCCCEEEEEECCEEEEEEC-
T ss_conf 9998742578428999776645788787887886799985799-----9999999998369998899998897999916-
Q ss_pred CCCHHHHHHHHHHHHHHHHH
Q ss_conf 78799999999999999987
Q gi|254780488|r 401 CITATDLDHIYNTINEAVDF 420 (423)
Q Consensus 401 ~it~~eId~~l~~l~~aL~~ 420 (423)
T Consensus 446 Ti~~~d~~~i~~~l~~il~~ 465 (465)
T PRK04311 446 TLEEEDEEALAAALLELLNK 465 (465)
T ss_pred CCCHHHHHHHHHHHHHHHHC
T ss_conf 38978999999999999619