HHsearch alignment for GI: 254780488 and conserved domain: PRK05839
>PRK05839 hypothetical protein; Provisional.
Probab=99.32 E-value=8.7e-11 Score=92.99 Aligned_cols=335 Identities=14% Similarity=0.115 Sum_probs=171.2
Q ss_pred EEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHCCC--CCCCEEECCCC
Q ss_conf 2899689876464102377536787899999999999985220102456897899999999972037--86411102654
Q gi|254780488|r 32 SYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAEQLARLLIKIAPL--GLQYVFFSDSG 109 (423)
Q Consensus 32 ~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~--~~~~v~f~~SG 109 (423)
T Consensus 16 ~~~~~~~~~dvi~L~iG~pd--f-~~P~~i~~A~~~~~~~~~~Y~~~~G~peLR~Aia~~~~~~~g~~v~~~~I~vt~Ga 92 (376)
T PRK05839 16 KEITPNKKGELLDLTIGEPQ--F-ETPKFIQDALKNNAHLLNKYPKSAGEEELREAQRGFFKRRFNIELKENELIPTFGT 92 (376)
T ss_pred HHCCCCCCCCEEECCCCCCC--C-CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCH
T ss_conf 74140489984879688999--9-98999999999864448977998782999999999999986899980249981788
Q ss_pred CCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHH
Q ss_conf 20256777764300133443321134320256653211234322333333222344542100012222222111101221
Q gi|254780488|r 110 STSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKH 189 (423)
Q Consensus 110 sEA~e~Alklar~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~i~~~~~~~~~~~l~~l~~~ 189 (423)
T Consensus 93 ~~al~~~~~~~l~-----~~~~~~i~~p~P~y~~y~~~~~~~g~~-------------~v~v~l~~e~~~~~~l~~~~~~ 154 (376)
T PRK05839 93 REVLFNFPQFVLF-----DKQNPTIAYPNPFYQIYEGAAIASRAK-------------SLYMNLTKENDFTPSLNEKELQ 154 (376)
T ss_pred HHHHHHHHHHHHC-----CCCCCEEEECCCCCHHHHHHHHHCCCC-------------CEEECCCCCCCCCCCCCHHHHH
T ss_conf 9999999999845-----799988997898763258999861686-------------3242464025888641187650
Q ss_pred CCCCCEEEEEC-CCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC---CC---C---E
Q ss_conf 27751134311-6554321122223332110011011123420001221244445554311223344---44---2---0
Q gi|254780488|r 190 CSTQKIAAFLV-EPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADI---TP---D---I 259 (423)
Q Consensus 190 ~~~~~iaavi~-EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~gi---~P---D---i 259 (423)
T Consensus 155 ----~tk~iilnsP--~NPTG~-v~s~eel~~i~~la~~~~~~iisDEiY~~l~~~~~~~s~~~~~~~~~~~~~~~vi~i 227 (376)
T PRK05839 155 ----EVDLVILNSP--NNPTGR-TLSLEELISWVKLALKYDFILINDECYSEIYENTPPPSLLEASILAGNESFKNVLVI 227 (376)
T ss_pred ----CCCEEEECCC--CCCCCC-CCCHHHHHHHHHHHCCCEEEEEEECCHHHHHCCCCCCCHHHHHHHHCCCCCCCEEEE
T ss_conf ----5899998899--899882-363999999987514736999980682886379998768886565145532537999
Q ss_pred EECCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHH-HHHCCHHHCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 20134433222344433224013210001222222223333322221001-10000000001123322210026789899
Q gi|254780488|r 260 LCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACA-AALANLQIWEKEPVIERIKNLERMHADRL 338 (423)
Q Consensus 260 ~~~gK~l~gG~~pisav~~~~~i~~~~~~~~~~~~~~h~~T~~gnpl~~a-aa~a~L~~i~~~~l~~~~~~~g~~l~~~l 338 (423)
T Consensus 228 ~s~SK~~~~~G~RiG~i~~~~~~i~~~~~~-------~~~~~~~~~~~~q~aa~~a---~~~~~---~~~~~r~~~~~~~ 294 (376)
T PRK05839 228 NSISKRSSAPGLRSGFIAGDSSILKKYKAY-------RTYLGCASPLPLQKAAAVA---WLDDE---HAEFFRNIYAKNL 294 (376)
T ss_pred ECCHHHCCCCCCCEEEEECCHHHHHHHHHH-------HHHCCCCCCHHHHHHHHHH---HCCCH---HHHHHHHHHHHHH
T ss_conf 232032014654069997899999999986-------5643678519999999999---72966---8999999999999
Q ss_pred HHHHHCCCEEEECCCCCEEE-EEECCCCCCCCCHHHHHHHHHH-HHCCEEEEEC---C------CEEEECCCCCCCHHHH
Q ss_conf 99751897777745533999-9970687666410689999999-9788599951---9------9899568987879999
Q gi|254780488|r 339 SLLKSNKKFVNIRQMGTIVA-LDFNVQNKGYFFDKNAKLKNFF-REKKILIRPL---G------HIMYLMPPYCITATDL 407 (423)
Q Consensus 339 ~~L~~~~~v~~vrG~Gl~~~-iel~~~~~~~~~~~~~~l~~~l-~~~Gil~~~~---g------n~i~l~Ppl~it~~eI 407 (423)
T Consensus 295 ~~~~~~l~~~--~P~g~fy~~~~~--~-------d~~~f~~~Ll~~~gV~v~PG~~FG~~~~g~~~vRls~--~~~~e~L 361 (376)
T PRK05839 295 KLAREILGIT--IPPYTFYVWLPV--Q-------NDENFTKKLYQNEGIKVLPGSYLGRNGIGKDYVRLAL--VYDTPKL 361 (376)
T ss_pred HHHHHHCCCC--CCCEEEEEEEEC--C-------CHHHHHHHHHHCCCEEEECCCCCCCCCCCCCEEEEEE--ECCHHHH
T ss_conf 9998753988--898037998668--9-------9899999999809999977400179999899699997--0889999
Q ss_pred HHHHHHHHHHHHH
Q ss_conf 9999999999987
Q gi|254780488|r 408 DHIYNTINEAVDF 420 (423)
Q Consensus 408 d~~l~~l~~aL~~ 420 (423)
T Consensus 362 ~eal~Rl~~f~e~ 374 (376)
T PRK05839 362 KKALERIKTYREN 374 (376)
T ss_pred HHHHHHHHHHHHH
T ss_conf 9999999999986