HHsearch alignment for GI: 254780488 and conserved domain: PRK05939
>PRK05939 hypothetical protein; Provisional.
Probab=98.33 E-value=7.9e-06 Score=59.52 Aligned_cols=166 Identities=13% Similarity=0.168 Sum_probs=100.5
Q ss_pred HCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf 02456897899999999972037864111026542025677776430013344332113432025665321123432233
Q gi|254780488|r 76 IFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSMRG 155 (423)
Q Consensus 76 ~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~SGsEA~e~Alklar~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~s~~~ 155 (423)
T Consensus 39 ~YsR~~nPT~~~le~~la~LEg--g~~a~~~sSGMaAi~~~l~~ll-------~~Gd~il~~~~~YG~t~~l-------- 101 (396)
T PRK05939 39 TYARQGTPTTAALEAKITEMEG--GVGTVCFATGMAAIAAVFLTLL-------RAGDHLVSSQYLFGNTNSL-------- 101 (396)
T ss_pred EEECCCCHHHHHHHHHHHHHHC--CCEEEEECCHHHHHHHHHHHHC-------CCCCEEEECCCCCCHHHHH--------
T ss_conf 3408998679999999999829--9749996579999999999835-------8898899538869229999--------
Q ss_pred CCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCC
Q ss_conf 33332223445421000122222221111012212775113431165543211222233321100110111234200012
Q gi|254780488|r 156 AFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIAD 235 (423)
Q Consensus 156 ~~~~~~~p~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~iaavi~EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~D 235 (423)
T Consensus 102 -~~-~l~~~GI~v~~vd-------~~d~~~~~~ai~~-~Tklv~~Es-psN-P~l~v~D---i~~i~~ia~~~g~~~vVD 166 (396)
T PRK05939 102 -LG-TLQGLGVEVTMVD-------ATDVQQVAAAIRP-NTRMVFVET-IAN-PGTQVAD---LAGIGALCRERGLVYVVD 166 (396)
T ss_pred -HH-HHHHCCEEEEEEC-------CCCHHHHHHHHCC-CCCEEEEEE-CCC-CCCCCCC---HHHHHHHHHHCCCEEEEE
T ss_conf -99-8653186999988-------9798999986185-661899980-899-9870758---999999999839979997
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCEEE--CCCCCCCCCCCCCCCCCC
Q ss_conf 21244445554311223344442020--134433222344433224
Q gi|254780488|r 236 EVMTGWGRTGKIFACNHADITPDILC--LSKGITGGALPLAATLCS 279 (423)
Q Consensus 236 EV~tG~GRtG~~~a~~~~gi~PDi~~--~gK~l~gG~~pisav~~~ 279 (423)
T Consensus 167 NT~a------tP~~~~Pl~~GaDivvhS~TKyi~GhsD~l~G~vv~ 206 (396)
T PRK05939 167 NTMT------SPWLFRPKSVGASLVINSLSKYIAGHGNALGGAVTD 206 (396)
T ss_pred CCCC------HHHHCCHHHHCCCEEEEECCCCCCCCCCEEEEEEEC
T ss_conf 7763------042058556389889983433025887747699965