HHsearch alignment for GI: 254780488 and conserved domain: PRK05968
>PRK05968 hypothetical protein; Provisional.
Probab=98.52 E-value=1.4e-06 Score=64.70 Aligned_cols=283 Identities=11% Similarity=0.157 Sum_probs=150.5
Q ss_pred HCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHH-HHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCC
Q ss_conf 0245689789999999997203786411102654202567777-643001334433211343202566532112343223
Q gi|254780488|r 76 IFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALK-MALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSMR 154 (423)
Q Consensus 76 ~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~SGsEA~e~Alk-lar~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~s~~ 154 (423)
T Consensus 56 ~YsR~~NPT~~~lE~~la~LE--gg~~a~~~sSGmaAis~~l~~ll--------~~Gd~iv~~~~~YggT~--------- 116 (389)
T PRK05968 56 IYTRGDNPTVRAFEEMLAKLE--GAEDARGFASGMAAISSTVLSFV--------EPGDRIVAVRHVYPDAY--------- 116 (389)
T ss_pred EEECCCCHHHHHHHHHHHHHH--CCCEEEEECCHHHHHHHHHHHHH--------CCCCEEEECCCCCCCHH---------
T ss_conf 142898866999999999982--99638885488999999999960--------89998985887667589---------
Q ss_pred CCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECC
Q ss_conf 33333222344542100012222222111101221277511343116554321122223332110011011123420001
Q gi|254780488|r 155 GAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIA 234 (423)
Q Consensus 155 ~~~~~~~~p~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~iaavi~EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~ 234 (423)
T Consensus 117 ~l~~~~l~~~GI~v~~vd~-------~d~~~~~~~i~--~Tklv~~Et-psN-P~l~v~D---I~~ia~iA~~~g~~~vV 182 (389)
T PRK05968 117 RLFGTLLKRMGVEVDYVDG-------RDEEAVAKALP--GAKLLYLES-PTS-WVFELQD---IAALAALAKRHGVVTVI 182 (389)
T ss_pred HHHHHHHHCCCCEEEEECC-------CCHHHHHHCCC--CCCEEEEEC-CCC-CCCCCCC---HHHHHHHHHHCCCEEEE
T ss_conf 9999888607846999689-------99999996276--872899978-999-8872738---99999999983995999
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCEEE--CCCCCCCCCCCC-CCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCH---
Q ss_conf 221244445554311223344442020--134433222344-43322401321000122222222333332222100---
Q gi|254780488|r 235 DEVMTGWGRTGKIFACNHADITPDILC--LSKGITGGALPL-AATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIAC--- 308 (423)
Q Consensus 235 DEV~tG~GRtG~~~a~~~~gi~PDi~~--~gK~l~gG~~pi-sav~~~~~i~~~~~~~~~~~~~~h~~T~~gnpl~~--- 308 (423)
T Consensus 183 DNTfa------tP~~~~Pl~~GaDivvhS~TKyi~GHsDvl~G~v~~~~~~~~~~~~~~~---~~lG~~l--sP~~a~l~ 251 (389)
T PRK05968 183 DNSWA------SPVFQRPITLGVDLVIHSASKYLGGHSDTVAGVVAGSKEHIARINAEAY---PYLGGKL--SPFEAWLL 251 (389)
T ss_pred ECCCC------HHHHCCHHHHCCCEEEEECCCCCCCCCCCEEEEEECCHHHHHHHHHHHH---HHCCCCC--CHHHHHHH
T ss_conf 77861------1642584240798799704534468988442699456999999999999---8627778--85888999
Q ss_pred HHHHCCHHH-CCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE-------------EECCCCCEEEEEECCCCCCCCCHHHH
Q ss_conf 110000000-0011233222100267898999975189777-------------77455339999970687666410689
Q gi|254780488|r 309 AAALANLQI-WEKEPVIERIKNLERMHADRLSLLKSNKKFV-------------NIRQMGTIVALDFNVQNKGYFFDKNA 374 (423)
Q Consensus 309 aaa~a~L~~-i~~~~l~~~~~~~g~~l~~~l~~L~~~~~v~-------------~vrG~Gl~~~iel~~~~~~~~~~~~~ 374 (423)
T Consensus 252 lRGL~TL~lRm~rh--~~nA~~vA~~L~-------~hp~V~~V~yPgL~shp~~~l~g~gg~~sf~l~~~~------~~~ 316 (389)
T PRK05968 252 LRGLRTLPLRMKAH--EASALLIARRLK-------AHPVVETVCHPALANHPPAGLSGTSGLFSFIFREGV------DVR 316 (389)
T ss_pred HCCCCCHHHHHHHH--HHHHHHHHHHHH-------HCCCCCEEECCCCCCCHHHHCCCCCEEEEEEECCHH------HHH
T ss_conf 84798699999999--999999999996-------199986633888522313421786437999957779------999
Q ss_pred HHHHHHHHCCEEE--EECC--CEEEECCCC------------------------CCCHHHHHHHHHHHHHHHHHH
Q ss_conf 9999999788599--9519--989956898------------------------787999999999999999875
Q gi|254780488|r 375 KLKNFFREKKILI--RPLG--HIMYLMPPY------------------------CITATDLDHIYNTINEAVDFL 421 (423)
Q Consensus 375 ~l~~~l~~~Gil~--~~~g--n~i~l~Ppl------------------------~it~~eId~~l~~l~~aL~~l 421 (423)
T Consensus 317 ~f~~~L~---lf~~a~SlGg~eSLi-~~~~~~~~~~~~~~~~~~~Gi~~~liRlSVGlEd~eDLi~Dl~qAL~~a 387 (389)
T PRK05968 317 RFADALK---LFRLGVSWGGHESLV-VPAEVVLQQKAQPNSAARFGISPRSVRLHVGLEGTEALWADLEQALAAA 387 (389)
T ss_pred HHHHHCC---CCEEECCCCCCCCCC-CCCHHHCCCCCCHHHHHHCCCCCCEEEEEEEECCHHHHHHHHHHHHHHH
T ss_conf 9998488---075631668643021-8706641677998899865969496999931099999999999999984