HHsearch alignment for GI: 254780488 and conserved domain: PRK08960
>PRK08960 hypothetical protein; Provisional.
Probab=99.69 E-value=4.9e-15 Score=121.70 Aligned_cols=338 Identities=14% Similarity=0.111 Sum_probs=192.9
Q ss_pred CCCCEEEECHHHHHHHCCCCCCHHHHHHHHHHHHHHCC-HHCCCCCCHHHHHHHHHHHHHCCCC--CCCEEECCCCCCHH
Q ss_conf 89876464102377536787899999999999985220-1024568978999999999720378--64111026542025
Q gi|254780488|r 37 ENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQ-IIFSEYTHEPAEQLARLLIKIAPLG--LQYVFFSDSGSTSI 113 (423)
Q Consensus 37 ~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~q~~~~~~-~~~~~~~~~~~~~la~~l~~~~p~~--~~~v~f~~SGsEA~ 113 (423)
T Consensus 29 ~~G~~vi~l~~G~pdf---~~p~~i~~a~~~a~~~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~d~I~vt~G~~~al 105 (387)
T PRK08960 29 AAGHDVIHLEIGEPDF---TTAAPIVAAGQAALAAGHTRYTAARGLPALREAIAGFYAQRYGLDVDPERILVTPGGSGAL 105 (387)
T ss_pred HCCCCEEECCCCCCCC---CCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHEEECCCHHHHH
T ss_conf 7799807889948999---8899999999999853899889987729999999999999858999843289808669999
Q ss_pred HHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHCCCC
Q ss_conf 67777643001334433211343202566532112343223333332223445421000122222221111012212775
Q gi|254780488|r 114 EVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQ 193 (423)
Q Consensus 114 e~Alklar~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~ 193 (423)
T Consensus 106 ~~~~~~l~-------~pGD~Vlv~~P~Yp~~~~~~~~~~-------------~~~~~vp~~~~~~~~~~~~~le~~~~~~ 165 (387)
T PRK08960 106 LLASSLLV-------DPGKHWLLADPGYPCNRHFLRLVE-------------GAAQLVPVGPDTRYQLTPALVERHWDSD 165 (387)
T ss_pred HHHHHHHC-------CCCCEEEEECCCCCCHHHHHHHHC-------------CEEEEEECCCCCCCCCCHHHHHHHCCCC
T ss_conf 99999956-------999879981787655289999853-------------7449997575447788999999727878
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCC---EEECCCCCCCCC
Q ss_conf 11343116554321122223332110011011123420001221244445554311223344442---020134433222
Q gi|254780488|r 194 KIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPD---ILCLSKGITGGA 270 (423)
Q Consensus 194 ~iaavi~EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~gi~PD---i~~~gK~l~gG~ 270 (423)
T Consensus 166 ~~~iil~nP--~NPTG~v~-s~~~l~~l~~~a~~~~~~vI~DEiY~~l~~~~~~~s--~~~~~~~~i~i~S~SK~~~~~G 240 (387)
T PRK08960 166 SVGALVASP--ANPTGTLL-SRDELAALSQALKARGGHLVVDEIYHGLTYGVDAAS--VLEVDDSAFVLNSFSKYFGMTG 240 (387)
T ss_pred CEEEEECCC--CCCCCCCC-CHHHHHHHHHHHHHCCCEEEEECCCHHHCCCCCCCC--CCCCCCCEEEEEECCCCCCCCC
T ss_conf 729997689--89886314-689999999987623977998446144125898653--1136787799950643255776
Q ss_pred CCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCC----CCHHHHHHHHHHHHHHCCC
Q ss_conf 344433224013210001222222223333322221001100000000011233222----1002678989999751897
Q gi|254780488|r 271 LPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERI----KNLERMHADRLSLLKSNKK 346 (423)
Q Consensus 271 ~pisav~~~~~i~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~----~~~g~~l~~~l~~L~~~~~ 346 (423)
T Consensus 241 ~RiG~~v~p~~~i~~~~~~~~------~~~~~~~~~~Q~aa~~al~~-~~~~~~~~~~~~~~~rrd~l~~~---l~~~~~ 310 (387)
T PRK08960 241 WRLGWLVAPPAAVPELEKLAQ------NLYISASSMAQHAALACFEP-ETIAILEARRAEFQRRRDFLLPA---LRELGF 310 (387)
T ss_pred CEEEEEEECHHHHHHHHHHHH------HCCCCCCCHHHHHHHHHHHH-CCHHHHHHHHHHHHHHHHHHHHH---HHHCCC
T ss_conf 305899988999999999998------54377987999999999621-55999999999999999999999---997599
Q ss_pred EEEECCCCCEEE-EEECCCCCCCCCHHHHHHHHHH-HHCCEEEEEC---C-----CEEEECCCCCCCHHHHHHHHHHHHH
Q ss_conf 777745533999-9970687666410689999999-9788599951---9-----9899568987879999999999999
Q gi|254780488|r 347 FVNIRQMGTIVA-LDFNVQNKGYFFDKNAKLKNFF-REKKILIRPL---G-----HIMYLMPPYCITATDLDHIYNTINE 416 (423)
Q Consensus 347 v~~vrG~Gl~~~-iel~~~~~~~~~~~~~~l~~~l-~~~Gil~~~~---g-----n~i~l~Ppl~it~~eId~~l~~l~~ 416 (423)
T Consensus 311 ~~~~~P~G~~y~w~~~--~~--~~-~d~~~~~~~ll~~~gV~v~PG~~Fg~~~~~~~~Rls~--~~~~~~l~eal~RL~~ 383 (387)
T PRK08960 311 GIAVEPQGAFYLYADI--SA--FG-GDAFAFCRHFLETEHVAFTPGLDFGRHQAGHHVRFAY--TQSLPRLQEAVERIAR 383 (387)
T ss_pred CCCCCCCEEEEEEEEC--CC--CC-CCHHHHHHHHHHHCCEEEECCHHHCCCCCCCEEEEEE--CCCHHHHHHHHHHHHH
T ss_conf 6045898666997888--88--89-9999999999986999997472208999999899997--6999999999999999
Q ss_pred HHH
Q ss_conf 998
Q gi|254780488|r 417 AVD 419 (423)
Q Consensus 417 aL~ 419 (423)
T Consensus 384 ~Lk 386 (387)
T PRK08960 384 GLR 386 (387)
T ss_pred HHC
T ss_conf 966