HHsearch alignment for GI: 254780488 and conserved domain: PRK13355
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional.
Probab=99.43 E-value=2.4e-11 Score=96.72 Aligned_cols=349 Identities=12% Similarity=0.137 Sum_probs=187.6
Q ss_pred CCCCEEEECHHHHHHHCCCCC-CHHHHHHHHHHHHHH-CCHHCCCCCCH-HHHHHHHHHHHHCCCCCCCEEECCCCCCHH
Q ss_conf 898764641023775367878-999999999999852-20102456897-899999999972037864111026542025
Q gi|254780488|r 37 ENHDKIIDAISSWWVITHGHR-HPIIMNAIRSASENY-DQIIFSEYTHE-PAEQLARLLIKIAPLGLQYVFFSDSGSTSI 113 (423)
Q Consensus 37 ~dG~~~lD~~~g~~~~~lGh~-~~~i~~a~~~q~~~~-~~~~~~~~~~~-~~~~la~~l~~~~p~~~~~v~f~~SGsEA~ 113 (423)
T Consensus 143 ~~g~~i~klnign-pa~fgf~~p~~~~~~~~~~~~~~~gy~~s~g~~~ar~a~~~~~q~~~~~~~~~~di~~gnGvSE~i 221 (518)
T PRK13355 143 ANGTHILKLNIGN-PAPFGFRTPDEVVYDMAHQLPDTEGYSPSKGLFSARKAIMQYAQLKNIPNVDIDDIYTGNGVSELI 221 (518)
T ss_pred HCCCEEEEECCCC-CCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHEEECCCHHHHH
T ss_conf 7488167634789-886688894899999997372345875455756899999999997699998740356547767999
Q ss_pred HHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHCCCC
Q ss_conf 67777643001334433211343202566532112343223333332223445421000122222221111012212775
Q gi|254780488|r 114 EVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQ 193 (423)
Q Consensus 114 e~Alklar~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~s~~~~~~~~~~p~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~ 193 (423)
T Consensus 222 ~~am~All-------n~GDeVLiP~P~YPlyta~v~L~Gg~p-------------V~y~~dEe~~w~PDiedLe~kIT~k 281 (518)
T PRK13355 222 NLSMSALL-------DDGDEVLVPSPDYPLWTACVNLAGGTA-------------VHYRCDEESEWYPDIDDIRSKITSK 281 (518)
T ss_pred HHHHHHHC-------CCCCEEEECCCCCCCHHHHHHHCCCEE-------------EEEEECCCCCCCCCHHHHHHHCCCC
T ss_conf 99999836-------899989825999977899988609878-------------8987452217788999998535715
Q ss_pred CEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCC---CCCCCEEE-----CCCC
Q ss_conf 113431165543211222233321100110111234200012212444455543112233---44442020-----1344
Q gi|254780488|r 194 KIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHA---DITPDILC-----LSKG 265 (423)
Q Consensus 194 ~iaavi~EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~---gi~PDi~~-----~gK~ 265 (423)
T Consensus 282 TKAIVInNP--NNPTGA-VyS~E~LeeIaeiArehdLiIISDEIY~~L----vYDg~~h~Siasla~d~~~It~NG~SKs 354 (518)
T PRK13355 282 TKAIVIINP--NNPTGA-LYPKEVLQQIVDIAREHQLIIFSDEIYDRL----VMDGLEHTSIASLAPDLFCVTFSGLSKS 354 (518)
T ss_pred CEEEEEECC--CCCCCC-CCCHHHHHHHHHHHHHCCEEEEECCCHHHC----CCCCCCCCCHHHCCCCCEEEEECCCCCC
T ss_conf 579999689--898887-889999999999999859699962302210----0689863047670886459998877666
Q ss_pred CCCCCCCCCCCC--CCHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCC-CCCCC---CCCCHHHHHHHHHH
Q ss_conf 332223444332--2401321000122222222333332222100110000000001-12332---22100267898999
Q gi|254780488|r 266 ITGGALPLAATL--CSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEK-EPVIE---RIKNLERMHADRLS 339 (423)
Q Consensus 266 l~gG~~pisav~--~~~~i~~~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~-~~l~~---~~~~~g~~l~~~l~ 339 (423)
T Consensus 355 yaMtGWRiGwmv~sG~~~~a~~~Ie~--l~-~Las~~lcsnvpaQ~A~~aAL~g~qs~~d~~~~~~rl~erRdlv~---e 428 (518)
T PRK13355 355 HMIAGFRAGWMMLSGNKRHAKDYIEG--LN-MLANMRMCSNVPAQSVVQTALGGHQSVKDYTVPGGRLYDQRELVY---D 428 (518)
T ss_pred EECCEEEEEEEEECCCHHHHHHHHHH--HH-HHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH---H
T ss_conf 33220113665424858999999999--99-986045663689999999986287648999999999999999999---9
Q ss_pred HHHHCCCEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEC---C----CEEEECCCCCCCHHHHHHHHH
Q ss_conf 975189777774553399999706876664106899999999788599951---9----989956898787999999999
Q gi|254780488|r 340 LLKSNKKFVNIRQMGTIVALDFNVQNKGYFFDKNAKLKNFFREKKILIRPL---G----HIMYLMPPYCITATDLDHIYN 412 (423)
Q Consensus 340 ~L~~~~~v~~vrG~Gl~~~iel~~~~~~~~~~~~~~l~~~l~~~Gil~~~~---g----n~i~l~Ppl~it~~eId~~l~ 412 (423)
T Consensus 429 ~Ln~IpGvscvkP~GAFYlFPkID~~~~~i~dDeeFal~LL~Ee~VlVVPGsaFG~~~pghfRIs--yaps~e~L~EA~~ 506 (518)
T PRK13355 429 MLNAIPGISAVKPKAAFYIFPKIDVKIFNIHSDEQFALDLLHEKHILISHGGAFNWDKPDHFRVV--YLPRLGMLEETMD 506 (518)
T ss_pred HHHCCCCCEECCCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHCCEEEECCCCCCCCCCCEEEEE--ECCCHHHHHHHHH
T ss_conf 98359997658998158995541534489989999999999858999958754489998979999--2799999999999
Q ss_pred HHHHHHHHH
Q ss_conf 999999875
Q gi|254780488|r 413 TINEAVDFL 421 (423)
Q Consensus 413 ~l~~aL~~l 421 (423)
T Consensus 507 RI~~FL~~y 515 (518)
T PRK13355 507 ELDDFFSYY 515 (518)
T ss_pred HHHHHHHHH
T ss_conf 999999986