HHsearch alignment for GI: 254780488 and conserved domain: TIGR00699
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase; InterPro: IPR004631 4-aminobutyrate aminotransferase eukaryotic (2.6.1.19 from EC) is a class III pyridoxal-phosphate-dependent aminotransferase. The enzyme catalyses the conversion of 4-aminobutanoate and 2-oxoglutarate into succinate semialdehyde and L-glutamate. The degree of sequence difference between this set and known bacterial examples is greater than the distance between either set the most similar enzyme with distinct function, and so the prokaryotic and eukaryotic sets have been placed into separate families. This family describes known eukaryotic examples of the enzyme. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.; GO: 0003867 4-aminobutyrate transaminase activity, 0009448 gamma-aminobutyric acid metabolic process.
Probab=100.00 E-value=0 Score=474.52 Aligned_cols=373 Identities=26% Similarity=0.389 Sum_probs=307.2
Q ss_pred EEEEEEEEEEEECCCCEEEECHHHHHHHCCCCCCHHHHHHHHH-HHHHHCCHHCCCCCCHHHHHHHHH----HHHHCCCC
Q ss_conf 6886213289968987646410237753678789999999999-998522010245689789999999----99720378
Q gi|254780488|r 25 KIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRS-ASENYDQIIFSEYTHEPAEQLARL----LIKIAPLG 99 (423)
Q Consensus 25 ~i~~~~G~~l~d~dG~~~lD~~~g~~~~~lGh~~~~i~~a~~~-q~~~~~~~~~~~~~~~~~~~la~~----l~~~~p~~ 99 (423)
T Consensus 44 dYekS~GNYl~DvDGN~lLDlYsQIsSiPiGYNnP~L~K~a~sPe~a~~-LinRPALGnfp~~~l~~~~~~g~~k~aPKg 122 (469)
T TIGR00699 44 DYEKSVGNYLVDVDGNVLLDLYSQISSIPIGYNNPALLKAAQSPEMATT-LINRPALGNFPSKDLAKILKSGILKVAPKG 122 (469)
T ss_pred CHHHCCCCEEEEECCCHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHH-HHCCCCCCCCCHHHHHHHHCCCCHHHCCCC
T ss_conf 3011157645631430478888777521224668789986517245788-644730146766799998548812324521
Q ss_pred CCCEEECCCCCCHHHHHHHHHHHCCCCCCCC---C--------------------CEEEEEECCCCCCCCCCCCCCCCCC
Q ss_conf 6411102654202567777643001334433---2--------------------1134320256653211234322333
Q gi|254780488|r 100 LQYVFFSDSGSTSIEVALKMALGFFNNNNMP---R--------------------NKIVVMEHGYHGDTIGSMSVSMRGA 156 (423)
Q Consensus 100 ~~~v~f~~SGsEA~e~Alklar~~~~~~~~~---r--------------------~~ii~~~~~yHG~t~~a~s~s~~~~ 156 (423)
T Consensus 123 ~~~v~~~~aG~dane~AfK~af~yYr~~~RGGp~~~Fs~eE~~s~m~N~~PG~P~~siLSF~~aFHGRlfGsLsTT~SKp 202 (469)
T TIGR00699 123 QDSVYRAMAGSDANELAFKAAFMYYRSKQRGGPERDFSEEENESCMVNQAPGSPDLSILSFKAAFHGRLFGSLSTTRSKP 202 (469)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCCHHHHHHHHHHCCCCC
T ss_conf 03011446664267899999999998358988875311788776431687558507888523431034444200034776
Q ss_pred CCCCCCCCCCCCCCEECCC------------CCCCCCCCCHHHHHCC-----CCCEEEEECCCCCCCCCCCCCCCCCCCC
Q ss_conf 3332223445421000122------------2222211110122127-----7511343116554321122223332110
Q gi|254780488|r 157 FNNSYEPLLFDVETIPFPH------------HNEEQKTLDDLEKHCS-----TQKIAAFLVEPLILGAGGMQTYRPYILK 219 (423)
Q Consensus 157 ~~~~~~p~~~~~~~i~~~~------------~~~~~~~l~~l~~~~~-----~~~iaavi~EP~i~~~gG~~~~~~~~l~ 219 (423)
T Consensus 203 iHKlD~P-aF~WP~A~FP~LkYPLeE~~~~N~~Ee~rCL~~vE~L~~~~~~pkrtVaA~IvEP-IQSEGGDNHAS~~Ff~ 280 (469)
T TIGR00699 203 IHKLDIP-AFDWPQAPFPSLKYPLEEHVEENAKEEQRCLEEVEDLIKKWHKPKRTVAAIIVEP-IQSEGGDNHASPDFFR 280 (469)
T ss_pred CCCCCCC-CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC-CCCCCCCCCCCHHHHH
T ss_conf 0317865-7774677787667870232575455888999999999973179861588888624-3478885343378889
Q ss_pred EEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCC--CCEEECCCCCCC-CCCCCCCCCCCHHHHHHHCCCCCCCCCC
Q ss_conf 0110111234200012212444455543112233444--420201344332-2234443322401321000122222222
Q gi|254780488|r 220 EFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADIT--PDILCLSKGITG-GALPLAATLCSEEIFDSHLSSDKKKTFF 296 (423)
Q Consensus 220 ~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~gi~--PDi~~~gK~l~g-G~~pisav~~~~~i~~~~~~~~~~~~~~ 296 (423)
T Consensus 281 KLr~i~~k~~v~FivDEVQTGvGaTGklWAHe~W~L~~P~D~vtFSKK~qtAGy-----FFH~~----~lr---Pn~pYr 348 (469)
T TIGR00699 281 KLRDITKKHNVAFIVDEVQTGVGATGKLWAHEHWNLDDPPDMVTFSKKFQTAGY-----FFHDP----ALR---PNKPYR 348 (469)
T ss_pred HHHHHHHHCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECHHHHCCCC-----CCCCC----CCC---CCCCCC
T ss_conf 999999885956899645508788633123002741113850220456412764-----23673----568---884400
Q ss_pred CCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCC--EEEEC--CCCCEEEEEECCCCCCCCCHH
Q ss_conf 33333222210011000000000112332221002678989999751897--77774--553399999706876664106
Q gi|254780488|r 297 HSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKK--FVNIR--QMGTIVALDFNVQNKGYFFDK 372 (423)
Q Consensus 297 h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~L~~~~~--v~~vr--G~Gl~~~iel~~~~~~~~~~~ 372 (423)
T Consensus 349 ~FNTW~GdP~r~l~~~~i~~eI~~~~L~~n~~~~Gd~Ly~GLe~L~~~YP~~~~nlRGKGrGTFiawD~--p----~~a~ 422 (469)
T TIGR00699 349 QFNTWMGDPSRALILREIIQEIKRKDLLNNVAAVGDYLYTGLEDLQKKYPEKVQNLRGKGRGTFIAWDT--P----DEAK 422 (469)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEECCC--C----CHHH
T ss_conf 035445778899999988876422577888998767889989999975013440344676421574049--8----8788
Q ss_pred HHHHHHHHHHCCEEEEECC-CEEEECCCCCCCHHHHHHHHHHHHHHH
Q ss_conf 8999999997885999519-989956898787999999999999999
Q gi|254780488|r 373 NAKLKNFFREKKILIRPLG-HIMYLMPPYCITATDLDHIYNTINEAV 418 (423)
Q Consensus 373 ~~~l~~~l~~~Gil~~~~g-n~i~l~Ppl~it~~eId~~l~~l~~aL 418 (423)
T Consensus 423 Rd~l~~~~r~~Gvn~GGcG~~aiRLRP~LvF~~hHA~ilL~~~~~~~ 469 (469)
T TIGR00699 423 RDKLLLKARLNGVNIGGCGVKAIRLRPMLVFQKHHADILLEAIEKII 469 (469)
T ss_pred HHHHHHHHCCCCEEECCCCCCCEECCCCHHHHHHHHHHHHHHHHHCC
T ss_conf 89999962238257626535424237530103556899999986309