HHsearch alignment for GI: 254780488 and conserved domain: TIGR01328

>TIGR01328 met_gam_lyase methionine gamma-lyase; InterPro: IPR006237 This family of sequences is a methionine gamma-lyase subset of a family of PLP-dependent trans-sulphuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine..
Probab=92.70  E-value=0.24  Score=29.27  Aligned_cols=292  Identities=15%  Similarity=0.241  Sum_probs=157.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHH-HHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCC
Q ss_conf             245689789999999997203786411102654202567777-6430013344332113432025665321123432233
Q gi|254780488|r   77 FSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALK-MALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSMRG  155 (423)
Q Consensus        77 ~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~SGsEA~e~Alk-lar~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~s~~~  155 (423)
T Consensus        53 YsRlgNPTv~~LE~riA~LE--g~EAavAt~SGMgAi~A~l~~~lkA--------gDh~i~-d~~lYGCTfall~~~---  118 (392)
T TIGR01328        53 YSRLGNPTVDLLERRIAELE--GAEAAVATASGMGAIAATLLSLLKA--------GDHVIS-DETLYGCTFALLEDA---  118 (392)
T ss_pred             EECCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHC--------CCEEEE-CCCCCCCHHHHHHHH---
T ss_conf             85267713778888987542--0467788751289999999999852--------875774-387420148998732---


Q ss_pred             CCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCC-CEECC
Q ss_conf             33332223445421000122222221111012212775113431165543211222233321100110111234-20001
Q gi|254780488|r  156 AFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYD-TLLIA  234 (423)
Q Consensus       156 ~~~~~~~p~~~~~~~i~~~~~~~~~~~l~~l~~~~~~~~iaavi~EP~i~~~gG~~~~~~~~l~~lr~lc~~~g-~llI~  234 (423)
T Consensus       119 -----ltkfgi~v~f~~~~~-------pee~~a~i~d-nT~ivYfET-PaN-Ptm~liD---~e~v~r~A~~~gG~kViv  180 (392)
T TIGR01328       119 -----LTKFGIDVKFVDMAS-------PEEVKAAIKD-NTKIVYFET-PAN-PTMKLID---LELVVRVAHEKGGVKVIV  180 (392)
T ss_pred             -----HHHHCCEEEEECCCC-------HHHHHHHCCC-CCEEEEEEC-CCC-CCHHHHH---HHHHHHHHHHCCCEEEEE
T ss_conf             -----677375279831787-------7999984489-977999865-998-7525775---999999997529828998


Q ss_pred             CCCCCCCCCCCCCCCCCCCCCCCCEEECC--CCCCC-CCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCC---H
Q ss_conf             22124444555431122334444202013--44332-223444332240132100012222222233333222210---0
Q gi|254780488|r  235 DEVMTGWGRTGKIFACNHADITPDILCLS--KGITG-GALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIA---C  308 (423)
Q Consensus       235 DEV~tG~GRtG~~~a~~~~gi~PDi~~~g--K~l~g-G~~pisav~~~~~i~~~~~~~~~~~~~~h~~T~~gnpl~---~  308 (423)
T Consensus       181 DNTfatP------~lt~P~alG~D~VVHSATKYigGHgDvVaG~~~G~~e~~q~iR~~g~KD~t--G~Vi--SPfdAwL~  250 (392)
T TIGR01328       181 DNTFATP------YLTRPVALGVDVVVHSATKYIGGHGDVVAGVLIGDAELLQRIRLVGVKDMT--GAVI--SPFDAWLV  250 (392)
T ss_pred             ECCCCCH------HHCCHHHCCCCEEEECCCCCCCCCHHHHHHHHCCCHHHHHHHCCCCCCCCC--CCEE--CHHHHHHH
T ss_conf             5662770------013803618776894241213761221122110775667440111100056--6500--55789999


Q ss_pred             HHHHCCHHH-CCCCCCCCCCCCHHHHHHH----------HHHHHHHCCCEE-EECCCCCEEEEEECCCCCCCCCHHHHHH
Q ss_conf             110000000-0011233222100267898----------999975189777-7745533999997068766641068999
Q gi|254780488|r  309 AAALANLQI-WEKEPVIERIKNLERMHAD----------RLSLLKSNKKFV-NIRQMGTIVALDFNVQNKGYFFDKNAKL  376 (423)
Q Consensus       309 aaa~a~L~~-i~~~~l~~~~~~~g~~l~~----------~l~~L~~~~~v~-~vrG~Gl~~~iel~~~~~~~~~~~~~~l  376 (423)
T Consensus       251 lRGLkTL~~RM~rhs--enA~kvAe~Lk~HPaVe~V~YPG~~~hp~hdiaakQM~~gGgm~~F~lKgg~-----a~~~k~  323 (392)
T TIGR01328       251 LRGLKTLAVRMKRHS--ENAEKVAEYLKEHPAVEKVYYPGLEEHPDHDIAAKQMKKGGGMLAFELKGGE-----ADAKKL  323 (392)
T ss_pred             HHHHHHHHHHHHHHH--HHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHHHHHHCCCCEEEEEECCCH-----HHHHHH
T ss_conf             743667778887730--5389999985238860212368877888740899987404872775432566-----899999


Q ss_pred             HHHHH--HC--------CEEEEEC------------------CCEEEECCCCCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             99999--78--------8599951------------------9989956898787999999999999999875
Q gi|254780488|r  377 KNFFR--EK--------KILIRPL------------------GHIMYLMPPYCITATDLDHIYNTINEAVDFL  421 (423)
Q Consensus       377 ~~~l~--~~--------Gil~~~~------------------gn~i~l~Ppl~it~~eId~~l~~l~~aL~~l  421 (423)
T Consensus       324 ~n~LkLIr~AVSLGdaEtLIQHPAsMTHavvp~eeR~aaGI~~gm~RlS----vGlEd~~d~~ADl~~aL~~L  392 (392)
T TIGR01328       324 LNRLKLIRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGISEGMVRLS----VGLEDVDDVLADLKQALDAL  392 (392)
T ss_pred             HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEE----CCHHHHHHHHHHHHHHHCCC
T ss_conf             8755576655312774200058764667898856784447664612230----04526999999999852149