HHsearch alignment for GI: 254780488 and conserved domain: TIGR03576

>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=94.85  E-value=0.27  Score=28.93  Aligned_cols=182  Identities=14%  Similarity=0.190  Sum_probs=101.8

Q ss_pred             CCCCCCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCC-CCCCCCCEEE--CCCCCCCCCCCCCCCCCCHHHHHHHC
Q ss_conf             22333211001101112342000122124444555431122-3344442020--13443322234443322401321000
Q gi|254780488|r  211 QTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACN-HADITPDILC--LSKGITGGALPLAATLCSEEIFDSHL  287 (423)
Q Consensus       211 ~~~~~~~l~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~~-~~gi~PDi~~--~gK~l~gG~~pisav~~~~~i~~~~~  287 (423)
T Consensus       150 ~vi~~d~~k~vI~~Ak~~~a~V~vDDA-sGA-RvR~L~gq~~al~lGADLvVTS~DKlM~G--PR~GlLaG~~eLV~ki~  225 (346)
T TIGR03576       150 KVVSEEDLKRVIKQAKSKEAIVLVDDA-SGA-RVRRLYGQPPALDLGADLVVTSTDKLMDG--PRGGLLAGRKELVDKIK  225 (346)
T ss_pred             EECCHHHHHHHHHHHHHCCCEEEEECC-CCC-CHHHHCCCCCCCCCCCCEEEEEHHHCCCC--CCCCEECCCHHHHHHHH
T ss_conf             004578899999998746984998548-887-51665199986555642688400212667--75411228889999999


Q ss_pred             CCCCCCCCCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCCCEE-EEEECCCCC
Q ss_conf             1222222223333322221001100000000011233222100267898999975189777774553399-999706876
Q gi|254780488|r  288 SSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIV-ALDFNVQNK  366 (423)
Q Consensus       288 ~~~~~~~~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~L~~~~~v~~vrG~Gl~~-~iel~~~~~  366 (423)
T Consensus       226 ~~~~----~~GlE--aq~Pi~aAmv~aLe~f~~~~l~~a~~r~~~~~l~~~~~l~----~-e~TptGf~ik~~~------  288 (346)
T TIGR03576       226 SVGE----QFGLE--AQAPLLAAVVRALEEFELSRIRDAFKRKEEVYLRLFDKLN----V-ERTPTGFVIKGVE------  288 (346)
T ss_pred             HHHH----HCCCC--CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC----C-CCCCCEEEEECCC------
T ss_conf             9987----52777--7841599999999707999999999999998876530357----4-3278537985656------


Q ss_pred             CCCCHHHH-HHHHHHHHCCEEEEEC------CCEEEECCCCCCCHHH---HHHHHHHHHHHH
Q ss_conf             66410689-9999999788599951------9989956898787999---999999999999
Q gi|254780488|r  367 GYFFDKNA-KLKNFFREKKILIRPL------GHIMYLMPPYCITATD---LDHIYNTINEAV  418 (423)
Q Consensus       367 ~~~~~~~~-~l~~~l~~~Gil~~~~------gn~i~l~Ppl~it~~e---Id~~l~~l~~aL  418 (423)
T Consensus       289 ---~e~~~~~~~~LL~~ygIiTIta~GmpgasktlR~d~--~skDAeri~~~~~v~av~~s~  345 (346)
T TIGR03576       289 ---EEKLIEIGLDLLRNYGIITITAVGMPGASKTLRFDL--AAKDAERIGDDYLVEAVKDSL  345 (346)
T ss_pred             ---HHHHHHHHHHHHHHCCEEEEECCCCCCCCCEEEEEE--ECCCHHHHCHHHHHHHHHHHC
T ss_conf             ---888899999999976948983477888763268762--025165515799999998541