>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.

Probab=99.02 E-value=3.3e-09 Score=82.32 Aligned_cols=310 Identities=13% Similarity=0.099 Sum_probs=166.5 Q ss_pred HHHHHHHHHHHCCHHCCCCCCHHHHHHHHHHHHHCCCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEECCC Q ss_conf 99999999852201024568978999999999720378641110265420256777764300133443321134320256 Q gi|254780488|r 62 MNAIRSASENYDQIIFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGY 141 (423) Q Consensus 62 ~~a~~~q~~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~v~f~~SGsEA~e~Alklar~~~~~~~~~r~~ii~~~~~y 141 (423) T Consensus 13 ~~~v~~~l~s~-~~~~----G~~v~~fE~~~~~~~--g~k~~v~~~sgT~AL~lal~al~------~~~gdeVivp~~tf 79 (380) T TIGR03588 13 IDAVVEVLKSD-FLTQ----GPTVPAFEEALAEYV--GAKYAVAFNSATSALHIACLALG------VGPGDEVWTTPITF 79 (380) T ss_pred HHHHHHHHHCC-CCCC----CHHHHHHHHHHHHHH--CCCEEEEECCHHHHHHHHHHHCC------CCCCCEEEECCCCC T ss_conf 99999998479-8668----976999999999997--85949997588999999999849------99989999678530 Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCHHHHHCC---CCCEEEEECCCCCCCCCCCCCCCCCCC Q ss_conf 65321123432233333322234454210001222222211110122127---751134311655432112222333211 Q gi|254780488|r 142 HGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCS---TQKIAAFLVEPLILGAGGMQTYRPYIL 218 (423) Q Consensus 142 HG~t~~a~s~s~~~~~~~~~~p~~~~~~~i~~~~~~~~~~~l~~l~~~~~---~~~iaavi~EP~i~~~gG~~~~~~~~l 218 (423) T Consensus 80 ~a--------t~~ai~~~Ga~pvf~Dvd~---~t---~~id~~~l~~~it~~~~~ktkaIi~vh~-~---G~-~--~d-~ 137 (380) T TIGR03588 80 VA--------TANCALYCGAKVDFVDIDP---DT---GNIDEDALEKKLAAAKGKLPKAIVPVDF-A---GK-S--VD-M 137 (380) T ss_pred HH--------HHHHHHHCCCEEEEEECCH---HH---CCCCHHHHHHHHHHCCCCCCEEEEEECC-C---CE-E--CC-H T ss_conf 88--------6799998799689984410---00---1489888777776436777259999489-8---54-3--48-9 Q ss_pred CEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCC--CCCEEECC----CCCCCCCCCCCCCCCCH-HHHHHHCCCCC Q ss_conf 0011011123420001221244445554311223344--44202013----44332223444332240-13210001222 Q gi|254780488|r 219 KEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADI--TPDILCLS----KGITGGALPLAATLCSE-EIFDSHLSSDK 291 (423) Q Consensus 219 ~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~gi--~PDi~~~g----K~l~gG~~pisav~~~~-~i~~~~~~~~~ 291 (423) T Consensus 138 ~~i~~ia~~~~i~lIEDaA~a-~G---a~~~gk~~Gs~~~gd~~~fSF~~~K~ittGe--GG~i~tnd~~l~~~~r~lr~ 211 (380) T TIGR03588 138 QAIAALAKKHGLKIIEDASHA-LG---AEYGGKPVGNCRYADATVFSFHPVKIITTAE--GGAVTTNDEELAERMRLLRS 211 (380) T ss_pred HHHHHHHHHCCCEEEEECCCH-HC---CCCCCCCCCCCCCCCEEEEECCCCCCCCCCC--CEEEEECCHHHHHHHHHHHH T ss_conf 999999998698899988001-15---7757876566443524677335555577788--53999699999999999997 Q ss_pred CC--------------C-----CCCCCCCCCCCCCHHHHHCCHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEE---E Q ss_conf 22--------------2-----223333322221001100000000011233222100267898999975189777---7 Q gi|254780488|r 292 KK--------------T-----FFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV---N 349 (423) Q Consensus 292 ~~--------------~-----~~h~~T~~gnpl~~aaa~a~L~~i~~~~l~~~~~~~g~~l~~~l~~L~~~~~v~---~ 349 (423) T Consensus 212 ~G~~~~~~~~~~~~~~~~~y~~~~~G~N~rmseiqAAig~~qL~~ld~--~~~~R~~ia~~Y~~~L~~~~~~~~~~~~~~ 289 (380) T TIGR03588 212 HGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKLDR--FVAKRREIAARYDRLLKDLPYFTPLTIPLG 289 (380) T ss_pred CCCCCCCCHHCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHCCCCCCCCCCCCCCC T ss_conf 696777310014678874036634766654312414876888888999--999999999999996478998356746999 Q ss_pred ECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEEC--------------------------CCEEEECCCCCCC Q ss_conf 74553399999706876664106899999999788599951--------------------------9989956898787 Q gi|254780488|r 350 IRQMGTIVALDFNVQNKGYFFDKNAKLKNFFREKKILIRPL--------------------------GHIMYLMPPYCIT 403 (423) Q Consensus 350 vrG~Gl~~~iel~~~~~~~~~~~~~~l~~~l~~~Gil~~~~--------------------------gn~i~l~Ppl~it 403 (423) T Consensus 290 ~~~~~~~y~i~~~~~~---~-~~r~~l~~~L~~~gI~t~~~y~Plh~~p~~~~~~~~~~~p~ae~~~~~~l~LP~~~~Lt 365 (380) T TIGR03588 290 SKSAWHLYPILLDQEF---G-CTRKEVFEALRAAGIGVQVHYIPVHLQPYYRQGFGDGDLPSAENFYLAEISLPLHPALT 365 (380) T ss_pred CCEEEEEEEEEECCCC---C-CCHHHHHHHHHHCCCCEEEECCCHHCCHHHHHCCCCCCCHHHHHHHHCEEECCCCCCCC T ss_conf 8315689999982667---3-14999999999779985672304422998882788799879999984979897999989 Q ss_pred HHHHHHHHHHHHHHH Q ss_conf 999999999999999 Q gi|254780488|r 404 ATDLDHIYNTINEAV 418 (423) Q Consensus 404 ~~eId~~l~~l~~aL 418 (423) T Consensus 366 ~~di~~I~~~Ik~vL 380 (380) T TIGR03588 366 LEQQQRVVETLRKVL 380 (380) T ss_pred HHHHHHHHHHHHHHC T ss_conf 999999999999869

HHsearch alignment for GI: 254780488 and conserved domain: TIGR03588