HHsearch alignment for GI: 254780488 and conserved domain: cd00615
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=96.92 E-value=0.0016 Score=43.99 Aligned_cols=170 Identities=19% Similarity=0.208 Sum_probs=79.9
Q ss_pred HHHHHHHHHHHCCCCCCCEEECCCCC-CHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCCCC-CCCCCCCCC
Q ss_conf 99999999972037864111026542-0256777764300133443321134320256653211234322-333333222
Q gi|254780488|r 85 AEQLARLLIKIAPLGLQYVFFSDSGS-TSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSM-RGAFNNSYE 162 (423)
Q Consensus 85 ~~~la~~l~~~~p~~~~~v~f~~SGs-EA~e~Alklar~~~~~~~~~r~~ii~~~~~yHG~t~~a~s~s~-~~~~~~~~~ 162 (423)
T Consensus 60 ~I~eAq~laA~~~-ga~~s~flvnGsT~g~~a~i~a~~-------~~gd~vlv-~RN~HkSv~~gl~l~g~~Pvyl---~ 127 (294)
T cd00615 60 PIKEAQELAARAF-GAKHTFFLVNGTSSSNKAVILAVC-------GPGDKILI-DRNCHKSVINGLVLSGAVPVYL---K 127 (294)
T ss_pred HHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHHHHHHC-------CCCCEEEE-ECCCHHHHHHHHHHCCCEEEEE---E
T ss_conf 9999999999983-999669982772699999999832-------89998998-2651899999999869848996---0
Q ss_pred CCCCCCCCEECCCCCCCCCCCCHHHHHC--CCCCEEEEECCCCCCCCCCCCCCCCCCCCEEECCCCCCCCEECCCCCCCC
Q ss_conf 3445421000122222221111012212--77511343116554321122223332110011011123420001221244
Q gi|254780488|r 163 PLLFDVETIPFPHHNEEQKTLDDLEKHC--STQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTG 240 (423)
Q Consensus 163 p~~~~~~~i~~~~~~~~~~~l~~l~~~~--~~~~iaavi~EP~i~~~gG~~~~~~~~l~~lr~lc~~~g~llI~DEV~tG 240 (423)
T Consensus 128 p~~~~~~gi~~~i~------~~~~~~al~~~p~~kav~lt~Pt--Y~G-~-~~--D-l~~i~~~~h~~~~~llVDEAhGa 194 (294)
T cd00615 128 PERNPYYGIAGGIP------PETFKKALIEHPDAKAAVITNPT--YYG-I-CY--N-LRKIVEEAHHRGLPVLVDEAHGA 194 (294)
T ss_pred CCCCCCCCCCCCCC------HHHHHHHHHHCCCCCEEEEECCC--CCE-E-EE--C-HHHHHHHHHHCCCEEEEECCCHH
T ss_conf 64355569538999------99999999858996589997799--887-7-66--8-99999998404997999775403
Q ss_pred CCCCCCCCCCCCCCCCCCEEECC--CCCCCCCCCCCCCC-CCHH
Q ss_conf 44555431122334444202013--44332223444332-2401
Q gi|254780488|r 241 WGRTGKIFACNHADITPDILCLS--KGITGGALPLAATL-CSEE 281 (423)
Q Consensus 241 ~GRtG~~~a~~~~gi~PDi~~~g--K~l~gG~~pisav~-~~~~ 281 (423)
T Consensus 195 h~~F~~~lp~~a~~~GAD~vv~S~HKtL-~a-ltQ~s~lh~~~~ 236 (294)
T cd00615 195 HFRFHPILPSSAAMAGADIVVQSTHKTL-PA-LTQGSMIHVKGD 236 (294)
T ss_pred HHHCCCCCCCCHHHCCCEEEEECHHHCC-CC-CCHHHHEEECCC
T ss_conf 4431877875566669639996232145-33-222532023799