RPSBLAST alignment for GI: 254780488 and conserved domain: TIGR01885

>gnl|CDD|130940 TIGR01885, Orn_aminotrans, ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis. Length = 401
 Score =  170 bits (433), Expect = 7e-43
 Identities = 114/398 (28%), Positives = 201/398 (50%), Gaps = 27/398 (6%)

Query: 28  KTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTH-EPAE 86
           K EG ++ D    + +D +S++  +  GH HP I+ A+   ++     + S   + +   
Sbjct: 25  KAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKL--TLSSRAFYNDVFG 82

Query: 87  QLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGF-FNNNNMPRNK--IVVMEHGYHG 143
           + A  + K+   G   V   ++G+ ++E A+K+A  + +    +P N+  IV  +  +HG
Sbjct: 83  EFAEYVTKL--FGYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHG 140

Query: 144 DTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVEPL 203
            T+G++S+S       ++ P +   + IP+ +    ++ L+D   +     + AF+VEP 
Sbjct: 141 RTLGAISMSTDPDSRTNFGPYVPGFKKIPYNNLEALEEALEDHGPN-----VCAFIVEP- 194

Query: 204 ILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLS 263
           I G  G+       LK+   +  K++ LLIADE+ TG GRTGK+   +H ++ PDI+ L 
Sbjct: 195 IQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIVLLG 254

Query: 264 KGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPV 323
           K ++GG  P++A L  +++  +       K   H S+Y  NP+ACA A+A L++ E+E +
Sbjct: 255 KALSGGVYPVSAVLADDDVMLT------IKPGEHGSTYGGNPLACAVAVAALEVLEEEKL 308

Query: 324 IERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVALDFNVQNKGY-FFDKNAKLKNFFRE 382
            E  + L  +  D+L  L        +R  G + A+  +    G   +D   KLK    E
Sbjct: 309 AENAEKLGEIFRDQLKKLPKP-IITEVRGRGLLNAIVIDESKTGRTAWDLCLKLK----E 363

Query: 383 KKILIRPL-GHIMYLMPPYCITATDLDHIYNTINEAVD 419
           K +L +P  G+I+ L PP  IT   LD     I + +D
Sbjct: 364 KGLLAKPTHGNIIRLAPPLVITEEQLDEGLEIIKKVID 401