RPS-BLAST 2.2.22 [Sep-27-2009]
Database: CddB
21,608 sequences; 5,994,473 total letters
Searching..................................................done
Query= gi|254780488|ref|YP_003064901.1|
adenosylmethionine--8-amino-7-oxononanoate transaminase [Candidatus
Liberibacter asiaticus str. psy62]
(423 letters)
>gnl|CDD|180329 PRK05964, PRK05964, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 423
Score = 681 bits (1760), Expect = 0.0
Identities = 203/424 (47%), Positives = 270/424 (63%), Gaps = 6/424 (1%)
Query: 1 MNHLHSNYPIWHPFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPI 60
+WHP+ Q +P I++ EG+YL + ++IDAISSWWV THGH HP
Sbjct: 3 QLMALDLSHVWHPYTQMKLHPPPIPIVRAEGAYLYLADGRELIDAISSWWVATHGHNHPY 62
Query: 61 IMNAIRSASENYDQIIFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMA 120
I AIR + D +IF+ +THEPAE+LA+ L+ + P GL +VFFSDSGS ++EVALKMA
Sbjct: 63 IDQAIREQLDRLDHVIFAGFTHEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMA 122
Query: 121 LGFFNNNNM-PRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEE 179
L ++ N R++ + + GYHGDTIG+MSV RG + Y PLLF+ T PFP E
Sbjct: 123 LQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHALYTPLLFEQVTAPFPPDGYE 182
Query: 180 QKTLDDLEKHCS--TQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEV 237
Q TLD LE +IAAF+VEPL+ GAGGM Y P L E RI ++ LLI DE+
Sbjct: 183 QATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEI 242
Query: 238 MTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFH 297
TG+GRTG +FAC A ++PDI+CLSKG+TGG LPLAATLC+ EIF++ S D+ K F H
Sbjct: 243 ATGFGRTGTLFACEQAGVSPDIMCLSKGLTGGYLPLAATLCTAEIFEAFYSDDRAKAFMH 302
Query: 298 SSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIV 357
S SYTANP+ACAAA A+L ++E EPV+ER+ L A+ L + ++R +G I
Sbjct: 303 SPSYTANPLACAAANASLDLFEDEPVLERVAALSAGLAEGLEPFRDLPGVADVRVLGAIG 362
Query: 358 ALDFNVQNKGYFFDKNAKLKNFFREKKILIRPLGHIMYLMPPYCITATDLDHIYNTINEA 417
A++ + L+ F E+ +L+RPLG+ +YLMPPY ITA +LD I + I E
Sbjct: 363 AVELDRPVL---ERDGPALRAFALERGVLLRPLGNTIYLMPPYIITAEELDRITDAIVEV 419
Query: 418 VDFL 421
D L
Sbjct: 420 ADEL 423
>gnl|CDD|180800 PRK07030, PRK07030, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 466
Score = 343 bits (882), Expect = 4e-95
Identities = 167/435 (38%), Positives = 244/435 (56%), Gaps = 29/435 (6%)
Query: 10 IWHPFVQ---HFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIR 66
+WHP Q H P I + EG +L D + +DA+SSWWV GH +P I I+
Sbjct: 15 LWHPCTQMKDHEQLPLIP-IRRGEGVWLEDFEGKRYLDAVSSWWVNVFGHANPRINQRIK 73
Query: 67 SASENYDQIIFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNN 126
+ + +I + ++HEP +L+ L+KI P GL F++D+GS++IEVALKM+ ++ N
Sbjct: 74 DQVDQLEHVILAGFSHEPVIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWRN 133
Query: 127 NNMPRNK-IVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFP--HHNEEQKTL 183
PR K V + + YHG+T+ +MSV F +Y+PLL D +P P + E +
Sbjct: 134 RGKPRKKRFVTLTNSYHGETLAAMSVGDVALFTETYKPLLLDTIKVPSPDCYLRPEGMSW 193
Query: 184 DD------------LEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTL 231
++ L +H +IAA +VEPLI GAGGM+ Y P LK +Y
Sbjct: 194 EEHSRRMFAHMEQTLAEH--HDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDRYGVH 251
Query: 232 LIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSS-D 290
LI DE+ G+GRTG +FAC A I PD LCLSK +TGG LPLAA L ++ ++ +
Sbjct: 252 LIHDEIAVGFGRTGTMFACEQAGIRPDFLCLSKALTGGYLPLAAVLTTDTVYQAFYDDYP 311
Query: 291 KKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNI 350
+ F HS SYT NP+ACAAALA L I+E++ VIE + L R A+ + L + +
Sbjct: 312 TLRAFLHSHSYTGNPLACAAALATLDIFEQDNVIENNRALARRMAEATAHLADHPHVAEV 371
Query: 351 RQMGTIVALDFNVQNKG----YFFDKNAKLKNFFR--EKKILIRPLGHIMYLMPPYCITA 404
RQ G I+A++ VQ+K Y + + LK + E+ L+RPLG ++Y +PPY IT
Sbjct: 372 RQTGMILAIEM-VQDKASKTPYPWQERRGLKVYQHALERGALLRPLGSVVYFLPPYVITP 430
Query: 405 TDLDHIYNTINEAVD 419
+D + +E +D
Sbjct: 431 EQIDFLAEVASEGID 445
>gnl|CDD|180746 PRK06916, PRK06916, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 460
Score = 329 bits (845), Expect = 9e-91
Identities = 166/442 (37%), Positives = 255/442 (57%), Gaps = 45/442 (10%)
Query: 10 IWHPFVQ----HFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAI 65
+WHPF Q +P I + EG L D N ++ D +SS W+ HGH+ P + AI
Sbjct: 24 VWHPFTQMKDYLEEDPLI--IERGEGRKLYDVNGNEYYDGVSSIWLNVHGHQVPELDEAI 81
Query: 66 RSASENYDQIIFSEY---THEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALG 122
R E ++I S + P+ LA LI++ P GL+ VF+SDSG+T++E+A+KMA
Sbjct: 82 R---EQLNKIAHSTLLGLANVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQ 138
Query: 123 FFNNNNMP-RNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPH------ 175
++ N P + + V +++ YHGDTIG++SV F+ Y LLF+ +P+P+
Sbjct: 139 YWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQVYSSLLFEAIKMPYPYTYRSPY 198
Query: 176 -HNEE---QKTLDDLEKHCST--QKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYD 229
+++ +K L++LE+ ++IAA +VEPL+ GAGGM T LK + KY+
Sbjct: 199 GNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKYN 258
Query: 230 TLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSS 289
L I DEV TG+GRTGK+FAC H ++TPDI+ KG+TGG LP+A T+ ++EI+++
Sbjct: 259 VLFITDEVATGFGRTGKMFACEHENVTPDIMTAGKGLTGGYLPIAITVTTDEIYNAFYGD 318
Query: 290 -DKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV 348
+++KTFFH SYT NP+ CA ALANL+++EK +IE++ A +L L + K
Sbjct: 319 YEEQKTFFHGHSYTGNPLGCAVALANLELYEKTNLIEQVARKTEYVATQLEDLFALKHVG 378
Query: 349 NIRQMGTIVALDFNVQNK------------GYFFDKNAKLKNFFREKKILIRPLGHIMYL 396
+IRQ+G +V ++ V+NK G K + RE +L RPLG+ +
Sbjct: 379 DIRQLGLMVGIEL-VKNKETKEPFEWTERVGVQVCKRS------RELGMLTRPLGNTIVF 431
Query: 397 MPPYCITATDLDHIYNTINEAV 418
MPP T +LD + + +A+
Sbjct: 432 MPPLASTIDELDEMLRILYKAI 453
>gnl|CDD|181189 PRK07986, PRK07986, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Validated.
Length = 428
Score = 314 bits (806), Expect = 3e-86
Identities = 151/425 (35%), Positives = 228/425 (53%), Gaps = 30/425 (7%)
Query: 10 IWHPFVQHF----CNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAI 65
IWHP+ P ++ EG LI + +++D +SSWW HG+ HP + A+
Sbjct: 13 IWHPYTSMTSPLPVYP----VVSAEGCELILADGRRLVDGMSSWWAAIHGYNHPQLNAAM 68
Query: 66 RSASENYDQIIFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFN 125
+S + ++F TH PA +L R L+ + P L+ VF +DSGS ++EVA+KMAL ++
Sbjct: 69 KSQIDAMSHVMFGGITHPPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQ 128
Query: 126 NNNMPRNKIVVMEHGYHGDTIGSMSV-----SMRGAFNNSYEPLLF-DVETIPFPHHNEE 179
PR + + + HGYHGDT G+MSV SM + LF F +E
Sbjct: 129 AKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSLYKGYLPENLFAPAPQSRFDGEWDE 188
Query: 180 QKTLD---DLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADE 236
+ + H +IAA ++EP++ GAGGM+ Y P LK ++ + LLIADE
Sbjct: 189 RDIAPFARLMAAH--RHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIADE 246
Query: 237 VMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFF 296
+ TG+GRTGK+FAC HA I PDILCL K +TGG + L+ATL + E+ ++ +S+ + F
Sbjct: 247 IATGFGRTGKLFACEHAGIAPDILCLGKALTGGTMTLSATLTTREVAET-ISNGEAGCFM 305
Query: 297 HSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTI 356
H ++ NP+ACA A A+L + E +++ +E + L+ L+ ++R +G I
Sbjct: 306 HGPTFMGNPLACAVANASLSLLESGDWQQQVAAIEAQLREELAPLRDAPMVADVRVLGAI 365
Query: 357 --VALDFNVQNKGYFFDKNAKLKNFFREKKILIRPLGHIMYLMPPYCITATDLDHIYNTI 414
V V A L+ FF E+ + IRP G ++YLMPPY I L + +
Sbjct: 366 GVVETTRPVN--------MAALQRFFVEQGVWIRPFGKLIYLMPPYIILPEQLQRLTAAV 417
Query: 415 NEAVD 419
N AV
Sbjct: 418 NRAVQ 422
>gnl|CDD|161905 TIGR00508, bioA, adenosylmethionine-8-amino-7-oxononanoate
transaminase. All members of the seed alignment have
been demonstrated experimentally to act as EC 2.6.1.62,
an enzyme in the biotin biosynthetic pathway. Alternate
names include 7,8-diaminopelargonic acid
aminotransferase, DAPA aminotransferase, and
adenosylmethionine-8-amino-7-oxononanoate
aminotransferase. The gene symbol is bioA in E. coli and
BIO3 in S. cerevisiae.
Length = 427
Score = 313 bits (804), Expect = 5e-86
Identities = 150/421 (35%), Positives = 229/421 (54%), Gaps = 23/421 (5%)
Query: 10 IWHPFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSAS 69
IWHP+ + +G L ++ ++ID +SSWW HG+ HP + A +
Sbjct: 15 IWHPYTSMSSPLPVYPVESADGVELTLDDGRRLIDGMSSWWAAIHGYNHPRLNAAAQKQI 74
Query: 70 ENYDQIIFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNM 129
+ ++F +TH+PA +L + L+K+ P L VF +DSGS ++EVALKMAL ++
Sbjct: 75 DKMSHVMFGGFTHKPAIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKGE 134
Query: 130 P-RNKIVVMEHGYHGDTIGSMSV-----SMRGAFNNSYEPLLF-DVETIPFPHH-NEEQK 181
R K + + GYHGDT G+MSV SM + +F F NEE
Sbjct: 135 KNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYKGYLPEQIFAPAPQNRFDEEWNEEAI 194
Query: 182 T--LDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMT 239
T +E H + +IAA ++EP++ GAGGM+ Y P LK + K+YD LLIADE+ T
Sbjct: 195 TPLAKLMELH--SDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADEIAT 252
Query: 240 GWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSS 299
G+GRTGK+FAC HA + PDILC+ K +TGG + L+AT+ ++++ +SS + F H
Sbjct: 253 GFGRTGKLFACEHAGVVPDILCVGKALTGGYMTLSATVTTDKV-AQTISSGEAGCFMHGP 311
Query: 300 SYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTI--V 357
++ NP+ACA A A+L I + +++ +E LS L+ N ++R +G I V
Sbjct: 312 TFMGNPLACAVAEASLAILLEGEWQKQVSAIENQLKRELSPLRKNPVVKDVRVLGAIGVV 371
Query: 358 ALDFNVQNKGYFFDKNAKLKNFFREKKILIRPLGHIMYLMPPYCITATDLDHIYNTINEA 417
+ V +L+ F E+ + IRP G ++Y+MPPY IT L + + EA
Sbjct: 372 EMYKPVN--------VEELQKKFVEQGVWIRPFGKLIYVMPPYIITTEQLQKLTAALIEA 423
Query: 418 V 418
+
Sbjct: 424 L 424
>gnl|CDD|181545 PRK08742, PRK08742, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 472
Score = 309 bits (792), Expect = 9e-85
Identities = 158/441 (35%), Positives = 246/441 (55%), Gaps = 36/441 (8%)
Query: 10 IWHPFVQHFCNP---TFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIR 66
+WHP Q +P I + EG++L+ + + +DA+SSWW GH P I AI
Sbjct: 31 LWHPCTQMREHPHTLPLVPIARGEGAWLVGHDGRRYLDAVSSWWTNLFGHAEPRIGAAIA 90
Query: 67 SASENYDQIIFSEYTHEPAEQLARLLIKIAPLG-----LQYVFFSDSGSTSIEVALKMAL 121
+ + +Q++ + +THEPA QLA L+ IAP L VF++D+GS +EVALKMA
Sbjct: 91 AQAGELEQVMLAGFTHEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAF 150
Query: 122 GFFNNNNMP-RNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFP------ 174
+F+N R + + +E+GYHG+TIG+++V + Y PLL + P P
Sbjct: 151 HYFHNRGEHRRTRFIALENGYHGETIGALAVGDIPLYRRVYAPLLLESLFAPSPDAYLAE 210
Query: 175 -------HHNEEQKTLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKK 227
+ + L L + S +I A ++EP + AGGM+ + P L+ +
Sbjct: 211 PGQSAEDYALQAADALQALFEQ-SPGEICALILEPRLQCAGGMRMHHPAYLRRARELCDA 269
Query: 228 YDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHL 287
+ LIADE+ TG+GRTG +FAC A + PD+LCLSKG+TGG LPL+A L +++++D+ L
Sbjct: 270 HGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCLSKGLTGGFLPLSAVLATQQLYDAFL 329
Query: 288 SSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKS---- 343
+++ F HS SYT NP+ACAAALA L I+ + VI R + A R++ L +
Sbjct: 330 DDSRERAFLHSHSYTGNPLACAAALATLDIFADDDVIAR----NQPTAARMTQLAAQIGE 385
Query: 344 NKKFVNIRQMGTIVALDFNVQ-NKGYFFDKNAKLK-NFFR---EKKILIRPLGHIMYLMP 398
+ ++RQ G +VA + NK F A++ + +R + +++RPLG ++Y MP
Sbjct: 386 HPHVADVRQAGMVVAFELTRGGNKRTPFPPAARVGLHAYRAALARGVVLRPLGDVLYWMP 445
Query: 399 PYCITATDLDHIYNTINEAVD 419
PYC+ L + +T A+D
Sbjct: 446 PYCVDEAQLALLADTTRHAID 466
>gnl|CDD|180767 PRK06943, PRK06943, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 453
Score = 293 bits (753), Expect = 4e-80
Identities = 143/420 (34%), Positives = 225/420 (53%), Gaps = 28/420 (6%)
Query: 10 IWHPFVQ--HFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRS 67
+WHP Q H + + EG++L D + + +DAISSWWV GH +P I A++
Sbjct: 22 VWHPCTQMKHHERLPLLPVARGEGAWLYDRDGRRYLDAISSWWVNLFGHANPRINAALKD 81
Query: 68 ASENYDQIIFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNN 127
+ + + + THEPA +LA L + L + FF+ G++++E+ALKM+ + N
Sbjct: 82 QLDTLEHAMLAGCTHEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNR 141
Query: 128 NMP-RNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQ------ 180
+ + V + +GYHG+TIG++ V+ F ++Y+PL+ + P +
Sbjct: 142 GRGDKREFVCLANGYHGETIGALGVTDVALFKDAYDPLIRHAHVVASPDARGARPGETAA 201
Query: 181 ----KTLDDLEKHCS--TQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIA 234
+ L D+ + + KIAA +VEPL+ A GM + P L+ + +Y LIA
Sbjct: 202 DVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRYGVHLIA 261
Query: 235 DEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKT 294
DE+ G GRTG FAC A + PD LCLSKGI+GG LPL+ L + IF + D +
Sbjct: 262 DEIAVGCGRTGTFFACEQAGVWPDFLCLSKGISGGYLPLSLVLSRDAIFAAFYDDDVTRG 321
Query: 295 FFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMH--ADRLSLLKSNKKFVNIRQ 352
F HS SYT NP+AC AALA L ++ ++ V+ R N + L+ L ++ + ++RQ
Sbjct: 322 FLHSHSYTGNPLACRAALATLDLFAEDDVLAR--NARKSARLRAALAPLAAHPQVRHLRQ 379
Query: 353 MGTIVALDFNV-QNKGYFFDKNAKLKNFF---REKKILIRPLGHIMYLMPPYCITATDLD 408
GTI A D + + F + FF E+++L+RP+G +YLMPPY + ++
Sbjct: 380 RGTIFAFDVALDGDAARTFS-----RRFFEAALERELLLRPIGTTVYLMPPYVLDDDEIA 434
>gnl|CDD|180174 PRK05630, PRK05630, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 422
Score = 285 bits (731), Expect = 1e-77
Identities = 138/419 (32%), Positives = 223/419 (53%), Gaps = 22/419 (5%)
Query: 10 IWHPFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSAS 69
IWHP+ + T+G +L E+ +IDA+SSWW HGH HP + A
Sbjct: 12 IWHPYAAPGVRNRL--VTSTDGVFLTLEDGSTVIDAMSSWWSAAHGHGHPRLKAAAHKQI 69
Query: 70 ENYDQIIFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNM 129
+ ++F THEPA +L R L+ + GL +VF+SDSGS S+EVA+KMAL +
Sbjct: 70 DTMSHVMFGGLTHEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGH 129
Query: 130 P-RNKIVVMEHGYHGDTIGSMSV-SMRGAFNNSYEPLLFDVETIPFP-----HHNEEQKT 182
P R +++ GYHGDT +MSV G ++ ++ L + P P E +
Sbjct: 130 PERTRLLTWRSGYHGDTFAAMSVCDPEGGMHSLWKGTLPEQIFAPAPPVRGSSPQEISEY 189
Query: 183 LDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWG 242
L LE + +AA ++EP++ GAGGM+ + +++ + K+D LLIADE+ TG+G
Sbjct: 190 LRSLELLID-ETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIADEIATGFG 248
Query: 243 RTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYT 302
RTG++FA A +TPDI+C+ K +TGG + AATLC++++ + + H ++
Sbjct: 249 RTGELFATLAAGVTPDIMCVGKALTGGFMSFAATLCTDKVAQLISTPNGGGALMHGPTFM 308
Query: 303 ANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVALDFN 362
ANP+ACA A A+L+I E +++K +E LS L ++R +G I ++
Sbjct: 309 ANPLACAVAHASLEIIETGMWRKQVKRIEAELIAGLSPLAHLPGVADVRVLGAIGVVE-- 366
Query: 363 VQNKGYFFDKNAKLKNFFR---EKKILIRPLGHIMYLMPPYCITATDLDHIYNTINEAV 418
++ ++ + + + +RP G ++Y+MPPY T+ + I + AV
Sbjct: 367 -------MEQPVDMEEATQAAVDHGVWLRPFGRLVYVMPPYITTSEQIAQICAALAAAV 418
>gnl|CDD|180441 PRK06173, PRK06173, adenosylmethionine--8-amino-7-oxononanoate
transaminase; Provisional.
Length = 429
Score = 280 bits (717), Expect = 7e-76
Identities = 143/412 (34%), Positives = 223/412 (54%), Gaps = 27/412 (6%)
Query: 10 IWHPFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSAS 69
IWHP+ + + +G + ++ ++ID +SSWW HG+ HP + A +
Sbjct: 14 IWHPYSSVTDPIPVYPVERADGVMITLKDGRRLIDGMSSWWAALHGYNHPRLNAAATNQL 73
Query: 70 ENYDQIIFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNM 129
I+F +THEPA +LA+ L++I P L +FF+DSGS ++EVA+KMAL +
Sbjct: 74 AKMSHIMFGGFTHEPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQQAKGE 133
Query: 130 P-RNKIVVMEHGYHGDTIGSMSV-----SMRGAFNNSYEPLLFDVE-TIPF--PHHNEEQ 180
R K + GYHGDT +MSV M G FN+S F + +I F ++E
Sbjct: 134 VQRTKFATIRSGYHGDTWHAMSVCDPVTGMHGLFNHSLPVQYFLPQPSIKFGEEWNDEAI 193
Query: 181 KTLDDL-EKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMT 239
+ L DL E+ +IAA ++EP++ GAGGM Y P L + + +Y LLI DE+ T
Sbjct: 194 EPLQDLLEQKGD--EIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLIFDEIAT 251
Query: 240 GWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSS 299
G+GRTGK+FA HA + PDI+C+ K +TGG L L+AT+ +E I + + S + K F H
Sbjct: 252 GFGRTGKLFALEHAGVVPDIMCIGKALTGGYLTLSATITTEAIAQT-ICSGEAKCFMHGP 310
Query: 300 SYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVAL 359
++ ANP+ACA A ++++ + P + I+ +E L+ +R +G I +
Sbjct: 311 TFMANPLACAIAAESIRLLLESPWQQNIQRIEAQLKQELAPAAEFDSVAEVRVLGAIGVV 370
Query: 360 DF----NVQNKGYFFDKNAKLKNFFREKKILIRPLGHIMYLMPPYCITATDL 407
+ N+ A L+ F E I +RP G ++Y+MPP+ I+ +L
Sbjct: 371 EMKEPVNM----------ATLQPRFVEHGIWVRPFGKLVYIMPPFIISPDEL 412
>gnl|CDD|168967 PRK07481, PRK07481, hypothetical protein; Provisional.
Length = 449
Score = 233 bits (595), Expect = 9e-62
Identities = 144/444 (32%), Positives = 216/444 (48%), Gaps = 49/444 (11%)
Query: 11 WHPFVQ----HFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIR 66
WHP P I++ +G Y+ D + K++D + W + GH + AI
Sbjct: 11 WHPMAHPAEMKARPP--IIIVRGDGVYVYDIDGKKLLDGVGGLWNVNVGHNREEVKEAIV 68
Query: 67 SASEN--YDQIIFSEYTHEPAEQLARLLIK-IAPLGLQYVFFSDSGSTSIEVALKMALGF 123
+ Y F TH A +L+ LI AP G++ VFFS GS S+E ALK+A +
Sbjct: 69 RQLDELEYYST-FDGTTHPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQY 127
Query: 124 FNNNNMP-RNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLL---FDVETI-----PFP 174
+ P R K + ++ GYHG G SV+ F +YEPLL F VET PF
Sbjct: 128 WKVRGQPERTKFISLKQGYHGTHFGGASVNGNTVFRRNYEPLLPGCFHVETPWLYRNPFT 187
Query: 175 HHNEEQ------KTLDDLEKHCSTQKIAAFLVEPLILGAGGM----QTYRPYILKEFMRI 224
+ E+ + L+ IAAF+ EP + GAGG+ + P +++E +
Sbjct: 188 EQDPEELARICARLLEREIAFQGPDTIAAFIAEP-VQGAGGVIVPPANFWP-LVRE---V 242
Query: 225 TKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFD 284
++ LLIADEV+TG+GRTG F + PDI+CL+KGIT G +PL AT+ + I D
Sbjct: 243 CDRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCLAKGITSGYVPLGATMVNARIAD 302
Query: 285 SHLSS-DKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHA---DRLSL 340
+ ++ D H +Y+ +P+ACAAALA L I +E + N + A + L
Sbjct: 303 AFEANADFGGAIMHGYTYSGHPVACAAALATLDIVVREDLPA---NAAKRGAYLLEGLQP 359
Query: 341 LKSNKKFV-NIRQMGTIVALDFNVQNK------GYFFDKNAKLKNFFREKKILIRPLGHI 393
LK + V ++R G ++ALD V +K + + RE +L+RP G
Sbjct: 360 LKERFELVGDVRGKGLMLALDL-VADKATREPIDPSKGYANAVADVARENGVLVRPSGTK 418
Query: 394 MYLMPPYCITATDLDHIYNTINEA 417
+ L PP I D+D I + ++
Sbjct: 419 IILSPPLVIQREDVDRIVDALDAG 442
>gnl|CDD|181707 PRK09221, PRK09221, beta alanine--pyruvate transaminase;
Provisional.
Length = 445
Score = 232 bits (594), Expect = 1e-61
Identities = 140/448 (31%), Positives = 214/448 (47%), Gaps = 63/448 (14%)
Query: 11 WHPFVQHFCNPTFKK----IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIR 66
W PF N FK ++ EG Y D + KI+D + W GH P I+ A+
Sbjct: 19 WMPFT---ANRQFKAAPRLLVSAEGMYYTDADGRKILDGTAGLWCCNAGHGRPEIVEAVA 75
Query: 67 SASENYDQIIFS---EYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGF 123
+ D ++ + H A +LA L ++AP GL +VFF++SGS S++ ALK+AL +
Sbjct: 76 RQAATLD---YAPAFQMGHPLAFELAERLAELAPGGLDHVFFTNSGSESVDTALKIALAY 132
Query: 124 FNNNNMP-RNKIVVMEHGYHGDTIGSMSVSMRGAFNN--SYEPLLFDVETIPFPHHNEEQ 180
R +++ E GYHG G +SV G NN + LL V+ +P E
Sbjct: 133 HRARGQGTRTRLIGRERGYHGVGFGGISVG--GIVNNRKMFGGLLPGVDHLPHTLDLPEN 190
Query: 181 K-----------TLDDLEKHC-----STQKIAAFLVEPLILGAGGMQTYRPYILKEFMRI 224
DDLE+ ST IAA +VEP+ AG + + Y L+ I
Sbjct: 191 AFSKGQPEHGAELADDLERLVALHDAST--IAAVIVEPMAGSAGVLVPPKGY-LQRLREI 247
Query: 225 TKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFD 284
K+ LLI DEV+TG+GR G FA +TPDI+ +KG+T GA+P+ A + S+EI+D
Sbjct: 248 CDKHGILLIFDEVITGFGRLGAAFAAERFGVTPDIITFAKGLTNGAIPMGAVIASDEIYD 307
Query: 285 SHLSS-DKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKS 343
+ + + FFH +Y+A+P+ACAA LA L I+ +E + ER L D + LK
Sbjct: 308 AFMQGPEYAIEFFHGYTYSAHPVACAAGLATLDIYREEDLFERAAELAPYFEDAVHSLKG 367
Query: 344 NKKFVNIRQMGTIVALD------------FNVQNKGYFFDKNAKLKNFFREKKILIRPLG 391
++IR +G + ++ + K + EK +L+R G
Sbjct: 368 LPHVIDIRNIGLVAGIELAPRPGAPGARGYEAFMKCF-------------EKGLLVRYTG 414
Query: 392 HIMYLMPPYCITATDLDHIYNTINEAVD 419
+ L PP I +D + + + +A+
Sbjct: 415 DTIALSPPLIIEKAQIDELVDALGDALR 442
>gnl|CDD|183999 PRK13360, PRK13360, omega amino acid--pyruvate transaminase;
Provisional.
Length = 442
Score = 228 bits (584), Expect = 1e-60
Identities = 138/437 (31%), Positives = 217/437 (49%), Gaps = 41/437 (9%)
Query: 11 WHPFVQHFCNPTFKK----IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIR 66
W PF N FKK ++ +G Y + +++D + W + GH P I+ A+R
Sbjct: 16 WMPFT---ANRQFKKAPRLLVAAKGMYYTTHDGRRVLDGTAGLWCVNAGHGRPEIVEAVR 72
Query: 67 SASENYDQIIFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFN- 125
+ + D + H A +LA + +IAP GL +VFF++SGS S++ ALK+AL +
Sbjct: 73 AQAGELDYAPAFQMGHPKAFELANRIAEIAPGGLNHVFFTNSGSESVDTALKIALAYHRA 132
Query: 126 NNNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPF------------ 173
R +++ E GYHG G +SV ++ LL V+ +P
Sbjct: 133 RGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKAFGALLPGVDHLPHTLDLARNAFSKG 192
Query: 174 -PHHNEEQKTLDDLEK----HCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKY 228
P H E D+LE+ H IAA +VEP+ G + + Y L+ I K+
Sbjct: 193 QPEHGAELA--DELERLVTLH-DASTIAAVIVEPVAGSTGVLIPPKGY-LQRLREICDKH 248
Query: 229 DTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLS 288
LLI DEV+TG+GR G FA + +TPD+L +KG+T GA+P+ A S EI D+ +
Sbjct: 249 GILLIFDEVITGFGRLGAPFAAQYFGVTPDLLTCAKGLTNGAIPMGAVFVSSEIHDAFMQ 308
Query: 289 SDKKKT-FFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKF 347
+ FFH +Y+ +P+ACAAALA L ++E+E ++ R L D L L+
Sbjct: 309 GPEAGIEFFHGYTYSGHPLACAAALATLDLYEREGLLTRAARLAPYWEDALHSLRDAPHV 368
Query: 348 VNIRQMGTIVALDFN-----VQNKGYFFDKNAKLKNFFREKKILIRPLGHIMYLMPPYCI 402
++IR +G + A++ + Y LK F EK ++IR G I+ L PP I
Sbjct: 369 IDIRNLGLVGAVELAPRDGKPGKRAY----EVFLKCF--EKGLMIRYTGDILALSPPLII 422
Query: 403 TATDLDHIYNTINEAVD 419
+D +++ + +A+
Sbjct: 423 EEAQIDELFDILAQALK 439
>gnl|CDD|179453 PRK02627, PRK02627, acetylornithine aminotransferase; Provisional.
Length = 396
Score = 227 bits (581), Expect = 5e-60
Identities = 116/406 (28%), Positives = 203/406 (50%), Gaps = 49/406 (12%)
Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASE------NYDQIIFSE 79
++ EG+ L D++ + +D ++ V GH HP ++ AI+ + N
Sbjct: 25 FVRGEGARLWDDDGKEYLDFLAGIAVNNLGHCHPKLVEAIQEQAAKLIHTSNL------- 77
Query: 80 YTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEH 139
Y EP E+LA L++++ G+ VFF +SG+ + E A+K+A + + + + +I+ E+
Sbjct: 78 YYIEPQEELAEKLVELS--GMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAEN 135
Query: 140 GYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFL 199
+HG T+ ++S + + + +EPL+ +PF ++ L+ T K AA +
Sbjct: 136 SFHGRTLATLSATGQPKYQEGFEPLVEGFIYVPF-------NDIEALKAAI-TDKTAAVM 187
Query: 200 VEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDI 259
+EP I G GG+ L+ + + LLI DEV TG GRTGK+FA H I PDI
Sbjct: 188 LEP-IQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQHYGIEPDI 246
Query: 260 LCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFF----HSSSYTANPIACAAALANL 315
+ L+KG+ GG +P+ A L E++ D F H S++ NP+ACAAALA +
Sbjct: 247 MTLAKGL-GGGVPIGAVLAKEKVADV----------FTPGDHGSTFGGNPLACAAALAVI 295
Query: 316 QIWEKEPVIERIKNLERMHADRLSLLKSNKKFVN-IRQMGTIVALDFNVQNKGYFFDKNA 374
+I E+E ++E + +L L + +R +G ++ ++ + K A
Sbjct: 296 EIIEEEGLLENAAEVGEYLRAKLRELLEKYPGIKEVRGLGLMIGIELDRPAAEIV--KKA 353
Query: 375 KLKNFFREKKILIRPLG-HIMYLMPPYCITATDLDHIYNTINEAVD 419
EK +LI G +++ L+PP I+ ++D + + E +
Sbjct: 354 ------LEKGLLINVTGDNVLRLLPPLIISKEEIDEAVDRLEEVLK 393
>gnl|CDD|181234 PRK08117, PRK08117, 4-aminobutyrate aminotransferase; Provisional.
Length = 433
Score = 212 bits (541), Expect = 2e-55
Identities = 124/413 (30%), Positives = 212/413 (51%), Gaps = 34/413 (8%)
Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPA 85
++K EG Y + + +D S V GHRHP ++ AI+ ++ +E
Sbjct: 29 VVKGEGCYYYGVDGKEYLDFTSGIAVANVGHRHPKVVQAIKEQADKLMHGPSGVIYYESI 88
Query: 86 EQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDT 145
+LA L +I P GL FFS+SG+ +IE ALK+A R I+ +HG T
Sbjct: 89 LKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHV-----TKRPYIISFTGCFHGRT 143
Query: 146 IGSMSVSMRGA-FNNSYEPLLFDVETIPFP-------HHNEEQ------KTLDDLEKHCS 191
+G++SV+ + + Y+PLL V P+P + E + L+ L KH
Sbjct: 144 LGALSVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQV 203
Query: 192 T-QKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFAC 250
T +++AA ++EP +LG GG LK+ I ++ LLI DEV TG+GRTG+ FA
Sbjct: 204 TPEEVAAVIIEP-VLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAA 262
Query: 251 NHADITPDILCLSKGITGGALPLAATLCSEEIFDS-HLSSDKKKTFFHSSSYTANPIACA 309
+ PDI+ ++KGI G LPL+A + S+E+ + L S H +++ NP+ACA
Sbjct: 263 QTFGVVPDIMTIAKGIASG-LPLSAVVASKELMEQWPLGS-------HGTTFGGNPVACA 314
Query: 310 AALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV-NIRQMGTIVALDFNVQNKGY 368
AALA L++ ++E +++ + +RL +LK + ++R +G ++ ++ +
Sbjct: 315 AALATLEVIKEEKLLDNANEMGAYALERLEVLKEKHPVIGDVRGIGLMIGIEIVDPDGEP 374
Query: 369 FFDKNAKLKNFFREKKILIR---PLGHIMYLMPPYCITATDLDHIYNTINEAV 418
D K+ + EK +L G+++ ++PP +T ++D + ++EA+
Sbjct: 375 DGDAVEKILDKCLEKGLLFYLCGNAGNVLRMIPPLTVTKEEIDEGLDILDEAL 427
>gnl|CDD|180401 PRK06105, PRK06105, aminotransferase; Provisional.
Length = 460
Score = 209 bits (535), Expect = 9e-55
Identities = 126/428 (29%), Positives = 203/428 (47%), Gaps = 47/428 (10%)
Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQI----IFSEYT 81
I + EG Y+ D+ + I+ ++ W + G ++ A A+ ++ FS +
Sbjct: 34 IERGEGIYVYDDAGKRYIEGMAGLWSVALGFSEQRLVEA---AARQMKKLPFYHTFSHKS 90
Query: 82 HEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMP-RNKIVVMEHG 140
H P LA L+ +AP+ + VFF++SGS + + +K+ + N P + KI+ + G
Sbjct: 91 HGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRG 150
Query: 141 YHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPF-----PHH--------NEEQ---KTLD 184
YHG TI S S+ G NN FD+ PH+ +EE + +
Sbjct: 151 YHGVTIAS--ASLTGLPNNHRS---FDLPLDRILHTGCPHYYRFGLPGESEEAFATRLAN 205
Query: 185 DLEKHCSTQ---KIAAFLVEPLILGAGGM----QTYRPYILKEFMRITKKYDTLLIADEV 237
+LE + IAAF+ EP ++GAGG+ +TY I + +KYD LL+ADEV
Sbjct: 206 ELEALILAEGPDTIAAFIGEP-VMGAGGVIVPPKTYWEKI----QAVLRKYDILLVADEV 260
Query: 238 MTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLS-SDKKKTFF 296
+ G+GRTG +F C I PDIL +SK ++ PL+A L +E+++D S K TF
Sbjct: 261 ICGFGRTGNMFGCETFGIKPDILVMSKQLSSSYQPLSAVLMNEKVYDPIADESGKIGTFG 320
Query: 297 HSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTI 356
H + + +P+A A AL NL I E+ ++ RL L + +R +G I
Sbjct: 321 HGFTASGHPVAAAVALENLAIIEERDLVGNAAERGARLQARLRALADHPLVGEVRGVGLI 380
Query: 357 VALDF--NVQNKGYF---FDKNAKLKNFFREKKILIRPLGHIMYLMPPYCITATDLDHIY 411
A++ + K F A+ E ++ R +G + PP ITA +D +
Sbjct: 381 AAVELVADKATKTPFEPPGKVGARANAAAHEHGVISRAMGDTLAFCPPLIITAAQVDEMV 440
Query: 412 NTINEAVD 419
+ A+D
Sbjct: 441 DRFGRALD 448
>gnl|CDD|180747 PRK06917, PRK06917, hypothetical protein; Provisional.
Length = 447
Score = 208 bits (531), Expect = 2e-54
Identities = 135/450 (30%), Positives = 215/450 (47%), Gaps = 59/450 (13%)
Query: 4 LHSNYPIWHPFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWV---ITHGHRHPI 60
L YP+ I +G YL D+N +K D SS V I HG +
Sbjct: 10 LGQPYPV---------------ISHGKGVYLYDQNGNKYFDG-SSGAVTAGIGHGVKE-- 51
Query: 61 IMNAIRSASENYDQIIF---SEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVAL 117
I +AI+ E +++ F S++T EPAE+LA+ L ++P L + FF +SGS + E A+
Sbjct: 52 IADAIK---EQAEEVSFVYRSQFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAM 108
Query: 118 KMALGFFNNNNMP-RNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETI--PFP 174
K+A+ F + ++KI+ YHG T+G++S+S + LL D TI P+
Sbjct: 109 KIAIQHFQERGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYC 168
Query: 175 HHNEEQKTLDDLEKHCST-----------QKIAAFLVEPLILGAGGMQTYRPYILKEFMR 223
+ QK + C+T + IAAF+ EP+I AG K
Sbjct: 169 YRCPVQKVYPTCQLACATELETAIERIGAEHIAAFIAEPIIGAAGAAVVPPKGYYKVIKE 228
Query: 224 ITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIF 283
I YD L IADEVMTG GRTG +FA H + PDI+ L KG+ G P+AAT+ S+ +
Sbjct: 229 ICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMTLGKGLGAGYTPIAATVVSDRVM 288
Query: 284 DSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKS 343
+ L + H + +ANP++ A ALA L+ EK + E+ L ++
Sbjct: 289 EPILRGSRSIMSGH--TLSANPLSAATALAVLEYMEKHNLPEKAAEKGEYLIKGLQKVQQ 346
Query: 344 NKKFV-NIRQMGTIVALDFNVQNKGYF--FDKN----AKLKNFFREKKILIRPL------ 390
+ ++R G ++ ++F V +K F K+ ++L + + +L+ P
Sbjct: 347 QSTIIGDVRGKGLLIGVEF-VADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQDG 405
Query: 391 --GHIMYLMPPYCITATDLDHIYNTINEAV 418
G + + PP IT ++LD + + ++V
Sbjct: 406 KEGDAVIIAPPMTITYSELDELLSIFAKSV 435
>gnl|CDD|180996 PRK07483, PRK07483, hypothetical protein; Provisional.
Length = 443
Score = 207 bits (529), Expect = 5e-54
Identities = 130/451 (28%), Positives = 211/451 (46%), Gaps = 60/451 (13%)
Query: 12 HPFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASEN 71
H F + T + EG YLID + +DA V GH HP ++ AI
Sbjct: 3 HVFHRS-PRATLPVAVAGEGIYLIDATGKRYLDASGGAAVSCLGHSHPRVIAAIH---AQ 58
Query: 72 YDQIIF---SEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNN 128
D++ + S +T EPAE LA L+ AP GL++V+F GS ++E ALK+A +F
Sbjct: 59 IDRLAYAHTSFFTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEAALKLARQYFVEIG 118
Query: 129 MP-RNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETI-P-FPHHNEE------ 179
P R + YHG+T+G++++ + PLL + + P + + +
Sbjct: 119 QPQRRHFIARRQSYHGNTLGALAIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDE 178
Query: 180 ---QKTLDDLEKHCSTQKI--------AAFLVEPLILGAGGMQTYRPYILKEFMRITKKY 228
Q+ D+LE KI AAF+ E ++ G P K + +Y
Sbjct: 179 AYGQRLADELE-----AKILELGPDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRY 233
Query: 229 DTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLS 288
LLI DEVM G GRTG +FAC + PD++ ++KG+ G P+ A L S+ I+D+
Sbjct: 234 GVLLILDEVMCGMGRTGTLFACEEDGVAPDLVTIAKGLGAGYQPIGAVLASDRIYDA--I 291
Query: 289 SDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKN----LERMHADRLSLLKSN 344
+D F H +Y + ACAAALA ++ ++ ++ ++ L +RL
Sbjct: 292 ADGSGFFQHGHTYLGHATACAAALAVQRVIAEDGLLANVRARGEQLRARLRERL----GQ 347
Query: 345 KKFV-NIRQMGTIVALDFNVQNKGYF--FDK----NAKLKNFFREKKILIRPLG------ 391
V +IR G V ++ V ++ FD +A++K + +++ P+G
Sbjct: 348 HPHVGDIRGRGLFVGVEL-VADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTIDGV 406
Query: 392 ---HIMYLMPPYCITATDLDHIYNTINEAVD 419
H++ L PP+ ITA +D I + +A+D
Sbjct: 407 RGDHVL-LAPPFIITAAQIDEIVERLGDAID 436
>gnl|CDD|162005 TIGR00707, argD, acetylornithine and succinylornithine
aminotransferases. Members of this family may also act
on ornithine, like ornithine aminotransferase (EC
2.6.1.13) (see MEDLINE:90337349) and on
succinyldiaminopimelate, like
N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17,
DapC, an enzyme of lysine biosynthesis) (see
MEDLINE:99175097).
Length = 379
Score = 206 bits (526), Expect = 1e-53
Identities = 132/401 (32%), Positives = 206/401 (51%), Gaps = 39/401 (9%)
Query: 25 KIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSE--YTH 82
KI++ +G+Y+ D N + +D ++ V + GH HP ++ A++ E ++++ Y
Sbjct: 12 KIVRGKGAYVYDVNGKEYLDFVAGIAVNSLGHAHPKLVEALK---EQLEKLVHVSNLYYT 68
Query: 83 EPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYH 142
EP E+LA L++ + G VFF +SG+ + E ALK+A + + + KI+ E+ +H
Sbjct: 69 EPQEELAEKLVEHS--GADRVFFCNSGAEANEAALKLARKYTGDKGKEKKKIIAFENSFH 126
Query: 143 GDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVEP 202
G T+G++S + + + +EPL+ P+ +K +DD + AA +VEP
Sbjct: 127 GRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDD--------ETAAVIVEP 178
Query: 203 LILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCL 262
I G GG+ LK I K D LLI DEV TG GRTGK FA H I PDI+ L
Sbjct: 179 -IQGEGGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDIITL 237
Query: 263 SKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEP 322
+KG+ GG +P+ ATL EE+ ++ D H S++ NP+ACAAALA L++ EKE
Sbjct: 238 AKGL-GGGVPIGATLAKEEVAEAFTPGD------HGSTFGGNPLACAAALAVLEVIEKER 290
Query: 323 VIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVALDFNVQNKGYFFDKNAKLKNFFRE 382
++E +K +RL L N +R G ++ ++ K K E
Sbjct: 291 LLENVKEKGDYFKERLEELGKNYPNKEVRGKGLMLGIELEAPCKDIV----KKA----LE 342
Query: 383 KKILIRPLG-HIMYLMPPYCITATDLDHIYNTINEAVDFLE 422
K +L+ G ++ +PP IT I+EAV LE
Sbjct: 343 KGLLVNCAGPKVLRFLPPLIITK-------EEIDEAVSALE 376
>gnl|CDD|168777 PRK07036, PRK07036, hypothetical protein; Provisional.
Length = 466
Score = 204 bits (521), Expect = 3e-53
Identities = 122/422 (28%), Positives = 201/422 (47%), Gaps = 37/422 (8%)
Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQII-------FS 78
I++ EG Y+ D + + +D I W + G+ + +AI DQ F
Sbjct: 37 IVEAEGIYVTDADGRRYLDGIGGMWCVNVGYGREEMADAIA------DQARRLPYYTPFG 90
Query: 79 EYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNK-IVVM 137
+ T+ PA +LA L ++AP L +VF + GST+++ AL+ +FN P K I+
Sbjct: 91 DMTNAPAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITR 150
Query: 138 EHGYHGDTIGSMSVSMRGAFNNSYEPL--LFDVETIPFPHHNEEQKTLDDLEK------- 188
YHG T + S++ + A ++ L + P P+ +
Sbjct: 151 GDAYHGSTYLTASLTGKAADRTEFDYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFE 210
Query: 189 ----HCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRT 244
IAAF+ EP ILG+GG+ P I ++YD L I+DEV+TG+GR
Sbjct: 211 DKILSLGADNIAAFIAEP-ILGSGGVIVPPPGYHARMREICRRYDILYISDEVVTGFGRL 269
Query: 245 GKIFAC-NHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLS--SDKKKTFFHSSSY 301
G FA I PDI+ +KG+T G PL A + SE + D +S + K F H +Y
Sbjct: 270 GHFFASEAVFGIQPDIITFAKGLTSGYQPLGAVIISERLLDV-ISGPNAKGNVFTHGFTY 328
Query: 302 TANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVALDF 361
+ +P+ACAAAL N++I E+E + E ++ + +RL+ L+ ++R + ++
Sbjct: 329 SGHPVACAAALKNIEIMEREGLCEHVREVGPYFEERLASLRELPLVGDVRGDHLMACVEC 388
Query: 362 --NVQNKGYFFDKNA---KLKNFFREKKILIRPLGHIMYLMPPYCITATDLDHIYNTINE 416
+ +K + A ++ +E+ +L+RPL H+ L PP IT +D I +
Sbjct: 389 VADKGSKALLPEDIAIGQRIDRHCQERGLLVRPLEHLCVLSPPLIITRAQIDEIVAILRA 448
Query: 417 AV 418
A+
Sbjct: 449 AI 450
>gnl|CDD|183175 PRK11522, PRK11522, putrescine--2-oxoglutarate aminotransferase;
Provisional.
Length = 459
Score = 202 bits (516), Expect = 1e-52
Identities = 112/393 (28%), Positives = 196/393 (49%), Gaps = 25/393 (6%)
Query: 32 SYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAE-QLAR 90
+ L+D + ID + + + GHR+P++++A+++ Q + S+ +P LA+
Sbjct: 74 NTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAK--QPLHSQELLDPLRAMLAK 131
Query: 91 LLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKI--VVMEHGYHGDTIGS 148
L + P L+Y FF +SG+ S+E ALK+A + PR K + +HG ++G+
Sbjct: 132 TLAALTPGKLKYSFFCNSGTESVEAALKLAKAY----QSPRGKFTFIATSGAFHGKSLGA 187
Query: 149 MSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVEPLILGAG 208
+S + + F + PLL +PF + + L + +K + +AA ++EP I G G
Sbjct: 188 LSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKK--TGDDVAAVILEP-IQGEG 244
Query: 209 GMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITG 268
G+ L ++ ++ LLI DEV TG GRTGK+FAC H ++ PDILCL+K + G
Sbjct: 245 GVILPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDILCLAKALGG 304
Query: 269 GALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIK 328
G +P+ AT+ +EE+F S F H++++ NP+ACAAALA + + ++ + + +
Sbjct: 305 GVMPIGATIATEEVF----SVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAE 360
Query: 329 NLERMHADRLSLLKSN--KKFVNIRQMGTIVALDFNVQNKGYFFDKNAKLKNFFREKKIL 386
D L R G ++A++F GY F FR++ ++
Sbjct: 361 QKGDYLLDGFRQLAREYPDLVQEARGKGMLMAIEFVDNEIGYNFA-----SEMFRQRVLV 415
Query: 387 IRPL--GHIMYLMPPYCITATDLDHIYNTINEA 417
L + + PP +T + + +A
Sbjct: 416 AGTLNNAKTIRIEPPLTLTIEQCEQVLKAARKA 448
>gnl|CDD|180248 PRK05769, PRK05769, 4-aminobutyrate aminotransferase; Provisional.
Length = 441
Score = 198 bits (507), Expect = 2e-51
Identities = 121/398 (30%), Positives = 197/398 (49%), Gaps = 70/398 (17%)
Query: 11 WHPFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASE 70
W+P V I + EG ++ D + + +D + V GH HP ++ A++ +E
Sbjct: 35 WYPLV----------IERGEGVWVEDVDGNVYLDFNAGIAVTNVGHAHPKVVKAVKEQAE 84
Query: 71 NYDQIIFSEYTHEPAEQLARLLIKIAPLGLQY-VFFSDSGSTSIEVALKMALGFFNNNNM 129
+ +++ +EPA +LA L++IAP G + VFF++SG+ S E A+K+A +
Sbjct: 85 KFLHYSLTDFYYEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIA-----RYHT 139
Query: 130 PRNKIVVMEHGYHGDTIGSMS------VSMRGAFNNSYEPLLFDVETIPFPH------HN 177
R I+ +HG T GS+S V +G F PL+ V +P+P+
Sbjct: 140 GRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFF-----PLMPGVIHVPYPNPYRNPWGI 194
Query: 178 EE-----QKTLDDLE-----KHCSTQKIAAFLVEPLILGAGGMQTYRPYI------LKEF 221
E LD +E K +++AA +VEP I G GG Y+ KE
Sbjct: 195 ENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEP-IQGEGG------YVVPPKNFFKEL 247
Query: 222 MRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEE 281
++ KY LLI DEV TG GRTGK+FA H + PDI+ L+K I GG LPL A + E
Sbjct: 248 RKLADKYGILLIDDEVQTGMGRTGKMFAIEHFGVEPDIITLAKAIAGG-LPLGAVIGRAE 306
Query: 282 IFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLL 341
+ H++++ NP+A AAALA L+ E+ ++E + L L L
Sbjct: 307 L-------MFLPPGSHANTFGGNPVAAAAALATLEELEEG-LLENAQKLGEYLRKELKEL 358
Query: 342 KSNKKFV-NIRQMGTIVALDFNVQNKGYFFDKNAKLKN 378
K +F+ ++R +G ++ ++ V+++ + + KL++
Sbjct: 359 KEKYEFIGDVRGLGLMIGVEL-VKDRK---EPDPKLRD 392
>gnl|CDD|180994 PRK07480, PRK07480, putative aminotransferase; Validated.
Length = 456
Score = 198 bits (506), Expect = 2e-51
Identities = 126/429 (29%), Positives = 213/429 (49%), Gaps = 52/429 (12%)
Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGH-RHPIIMNAIRSASE----NYDQIIFSEY 80
I + EG YL D +KI+D ++ W + G+ R + A R E N F +
Sbjct: 36 ITRAEGVYLWDSEGNKILDGMAGLWCVNVGYGRKELADAAARQMRELPYYN----TFFKT 91
Query: 81 THEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVV-MEH 139
TH PA +LA L ++AP G +VFF++SGS + + L+M ++ P+ K+++ ++
Sbjct: 92 THPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKN 151
Query: 140 GYHGDTIGSMSVS-MRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDD----------LEK 188
GYHG T+ S+ M+ P+ + I P+ E + LE
Sbjct: 152 GYHGSTVAGASLGGMKYMHEQGDLPIP-GIVHIDQPYWFGEGGDMTPEEFGLAAARQLEA 210
Query: 189 ---HCSTQKIAAFLVEPLILGAGGM----QTYRPYILKEFMRITKKYDTLLIADEVMTGW 241
+AAF+ EP I GAGG+ TY P E RI +KYD LL+ADEV+ G+
Sbjct: 211 KILELGADNVAAFIGEP-IQGAGGVIIPPATYWP----EIQRICRKYDILLVADEVICGF 265
Query: 242 GRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSY 301
GRTG+ F H I PD++ ++KG+T G +P+ A + + + + + F H +Y
Sbjct: 266 GRTGEWFGSQHFGIKPDLMTIAKGLTSGYIPMGAVGVGDRVAEVLIE--EGGEFNHGFTY 323
Query: 302 TANPIACAAALANLQIWEKEPVIERIKN-----LERMHADRLSLLKSNKKFVNIRQMGTI 356
+ +P+A A ALANL+I E ++ER+++ L++ RL L + +R +G +
Sbjct: 324 SGHPVAAAVALANLRILRDEGIVERVRDDTGPYLQK----RLRELADHPLVGEVRGVGLV 379
Query: 357 VALDFNVQNKG--YFFDKNAKL----KNFFREKKILIRPLGHIMYLMPPYCITATDLDHI 410
A++ V++K F+ + ++ +++R +G M + PP IT ++D +
Sbjct: 380 GAIEL-VKDKATRERFEAGGGVGTICRDHCFANGLIMRAVGDRMIISPPLVITHAEIDEL 438
Query: 411 YNTINEAVD 419
+A+D
Sbjct: 439 VEKARKALD 447
>gnl|CDD|181078 PRK07678, PRK07678, aminotransferase; Validated.
Length = 451
Score = 196 bits (501), Expect = 7e-51
Identities = 132/446 (29%), Positives = 218/446 (48%), Gaps = 51/446 (11%)
Query: 10 IWHPFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSAS 69
+WH + N T + K EG+++ D ++ +D +S W + G+ + A
Sbjct: 18 VWHGMKPYNPNATMV-VAKAEGAWVTDIQGNRYLDGMSGLWCVNVGYGRKELAEAA---- 72
Query: 70 ENYDQIIFSEY-----THEPAEQLARLLIKIAP-LGLQYV-FFSDSGSTSIEVALKMALG 122
Y+Q+ Y +HEPA +LA K+ LG +YV FFS+SGS + E A K+A
Sbjct: 73 --YEQLKTLSYFPLTQSHEPAIKLAE---KLNEWLGGEYVIFFSNSGSEANETAFKIARQ 127
Query: 123 FFNNNNMP-RNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLL--FDVETIPFPHHNEE 179
+ P R K + YHG+++G+++ + + YEPL F P +
Sbjct: 128 YHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYKYEPLAPGFLHVPPPDCYRMPG 187
Query: 180 QKTLDDLEKHCS-----------TQKIAAFLVEPLILGAGGM---QTYRPYILKEFMRIT 225
++ D + C ++ IAA ++EP+I G G + Q Y +K I
Sbjct: 188 IESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDY----MKAVKEIC 243
Query: 226 KKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDS 285
+K+ LLI+DEV+ G+GRTGK F + + PDI+ ++KGIT LPL+AT +EI+++
Sbjct: 244 QKHGALLISDEVICGFGRTGKAFGFMNYGVKPDIITMAKGITSAYLPLSATAVKKEIYEA 303
Query: 286 HLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNL-ERMHADRLSLLKSN 344
+ + F H +++ NP ACA AL NL+I E E +IER L E + L +
Sbjct: 304 FKGKGEYEHFRHVNTFGGNPAACALALKNLEIMENENLIERSAQLGELLLEQLKEELGEH 363
Query: 345 KKFVNIRQMGTIVALDFNVQNKG----YFFDKNAKLKNFFREKKILIRPLG-------HI 393
+IR G +V ++ V +K DK A + +EK ++I G ++
Sbjct: 364 PLVGDIRGKGLLVGIEL-VNDKETKEPADNDKVASVVAACKEKGLIIGKNGDTVAGYNNV 422
Query: 394 MYLMPPYCITATDLDHIYNTINEAVD 419
+ L PP I++ ++ I T+ A++
Sbjct: 423 LTLSPPLVISSEEIAFIVGTLKTALE 448
>gnl|CDD|185461 PTZ00125, PTZ00125, ornithine aminotransferase-like protein;
Provisional.
Length = 400
Score = 191 bits (487), Expect = 3e-49
Identities = 112/403 (27%), Positives = 190/403 (47%), Gaps = 32/403 (7%)
Query: 28 KTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENY---DQIIFSEYTHEP 84
+ +G ++ D K D +S++ + GH HP I+ A+ + ++ + +++
Sbjct: 19 RGKGVFVWDVEGKKYYDFLSAYSAVNQGHCHPKILAALINQAQKLTLTSRAFYNDVLGLA 78
Query: 85 AEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGF-FNNNNMPRN--KIVVMEHGY 141
+ + L G V +SG+ + E ALK A + + +P N KI+ +
Sbjct: 79 EKYITDLF------GYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNF 132
Query: 142 HGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVE 201
G TIG+ S S N++ P + E + + ++ LEK +AAF+VE
Sbjct: 133 SGRTIGACSASTDPKCYNNFGPFVPGFELVDY-------NDVEALEKLLQDPNVAAFIVE 185
Query: 202 PLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILC 261
P I G G+ LK+ + KKY+ LLI DE+ TG GRTGK+ A +H + PDI+
Sbjct: 186 P-IQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLLAHDHEGVKPDIVL 244
Query: 262 LSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKE 321
L K ++GG P++A L ++++ + H S+Y NP+ACA A+ L++ ++E
Sbjct: 245 LGKALSGGLYPISAVLANDDVMLVIKPGE------HGSTYGGNPLACAVAVEALEVLKEE 298
Query: 322 PVIERIKNLERMHADRLSLLKSNKKFVN-IRQMGTIVALDFNVQNKGYFFDKNAKLKNFF 380
+ E + L + D L L +V IR G + A+ F+ + +D KLK
Sbjct: 299 KLAENAQRLGEVFRDGLKELLKKSPWVKEIRGKGLLNAIVFDHSDGVNAWDLCLKLK--- 355
Query: 381 REKKILIRPLG-HIMYLMPPYCITATDLDHIYNTINEAVDFLE 422
E +L +P +I+ PP IT LD I + + +
Sbjct: 356 -ENGLLAKPTHDNIIRFAPPLVITKEQLDQALEIIKKVLKSFD 397
>gnl|CDD|178557 PLN02974, PLN02974, adenosylmethionine-8-amino-7-oxononanoate
transaminase.
Length = 817
Score = 191 bits (486), Expect = 4e-49
Identities = 140/490 (28%), Positives = 206/490 (42%), Gaps = 113/490 (23%)
Query: 10 IWHPFVQHFCNPTFKKIIKTEGSYLID-----------ENHDKII------DAISSWWVI 52
+W PF QH ++ + +ID + DA +SWW
Sbjct: 325 LWWPFTQH-------ALVPRDSVTVIDSRCGEDFSVYKPKTNSTCSIVQQFDACASWW-- 375
Query: 53 THG---HRHPIIMNAIRSASENYDQIIFSEYTHEPAEQLARLLIKIAPLG-LQYVFFSDS 108
T G P + A+ A+ Y ++F E HEPA + A LL+ G VFFSD+
Sbjct: 376 TQGPDPTLQPELARAVAYAAGRYGHVMFPENVHEPALRAAELLLGGPGKGWASRVFFSDN 435
Query: 109 GSTSIEVALKMAL-------GFFNNNNMPRN-------KIVVMEHGYHGDTIGSMSVSMR 154
GST+IEVALKMA GF N+ + K++ ++ YHGDT+G+M
Sbjct: 436 GSTAIEVALKMAFRKFIVDHGFLENSGNEKRGGDLIELKVLALDGSYHGDTLGAMEAQAP 495
Query: 155 GAFNNS-----YEP--LLFDVET---------IPFPHHNEEQ------------------ 180
F Y L D T I P
Sbjct: 496 SVFTGFLQQPWYSGRGLFLDPPTVGMRNGRWNISLPEGFSSGLEGEETTWESRDEVFDKT 555
Query: 181 ---------------KTLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRIT 225
+ LD+ E IAA ++EP++ GAGGM P + +++
Sbjct: 556 RDSTPLAKAYRSYIEQQLDEYEASAKNGHIAALIIEPVLHGAGGMLLIDPLFQRALVQVC 615
Query: 226 KKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDS 285
+ +I DEV TG R G A PDI C +K +TGG +PLAATL +EE+F++
Sbjct: 616 RSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACYAKLLTGGLVPLAATLATEEVFEA 675
Query: 286 HLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEP-----VIERIKNLERM-----HA 335
K H SYTA+P+ CAAA LQ W K+P +I L R
Sbjct: 676 FRGPSKLDALLHGHSYTAHPMGCAAAAKALQ-WYKDPSTNPNLIPPGSRL-RELWDEELV 733
Query: 336 DRLSLLKSNKKFVNIRQMGTIVALDFNVQ--NKGY--FFDKNAKLKNFFREKKILIRPLG 391
+S L + ++ V++ GT++AL+ + + GY + ++ ++ RE I RPLG
Sbjct: 734 RAISSLPNVERVVSL---GTVLALELDAEGSGSGYSSLYARSV-VRRLRREDGIYARPLG 789
Query: 392 HIMYLMPPYC 401
+++YLM
Sbjct: 790 NVVYLMCGPT 799
>gnl|CDD|132415 TIGR03372, putres_am_tran, putrescine aminotransferase. Members of
this family are putrescine aminotransferase, as found in
Escherichia coli, Erwinia carotovora subsp. atroseptica,
and closely related species. This pyridoxal phosphate
enzyme, as characterized in E. coli, can act also on
cadaverine and, more weakly, spermidine.
Length = 442
Score = 187 bits (476), Expect = 4e-48
Identities = 118/412 (28%), Positives = 196/412 (47%), Gaps = 40/412 (9%)
Query: 14 FVQHFCNPTF---KKIIKTEGSY------------LIDENHDKIIDAISSWWVITHGHRH 58
+ NP F +K + G Y LID ++ ID + + + GHR+
Sbjct: 34 CFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGGLNTLIDTQGNEFIDCLGGFGIFNVGHRN 93
Query: 59 PIIMNAIRSASENYDQIIFSEYTHEPAE-QLARLLIKIAPLGLQYVFFSDSGSTSIEVAL 117
P ++ A+ + Q + S+ +P LA+ L + P L+Y FF +SG+ S+E AL
Sbjct: 94 PNVIAAVENQLAK--QPLHSQELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAAL 151
Query: 118 KMALGFFNNNNMPRNK--IVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPH 175
K+A + PR K + +HG ++G++S + + AF + PLL + F
Sbjct: 152 KLAKAY----QSPRGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGD 207
Query: 176 HNEEQKTLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIAD 235
K L++ +K + +AA ++EP I G GG+ L + ++ LLI D
Sbjct: 208 IEAMLKALNECKK--TGDDVAAIILEP-IQGEGGVILPPEGYLPAVRALCDEFGALLILD 264
Query: 236 EVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTF 295
EV TG GRTGK+FAC H + PDILCL+K + GG +P+ AT+ +E +F + F
Sbjct: 265 EVQTGMGRTGKMFACEHEGVQPDILCLAKALGGGVMPIGATIATEAVFSVLFDN----PF 320
Query: 296 FHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSN--KKFVNIRQM 353
H++++ NP+ACAAALA + ++ + + D L + + R
Sbjct: 321 LHTTTFGGNPLACAAALATINELLEKNLPAQAAIKGDFLLDGFQQLAAEYPDLIIEARGK 380
Query: 354 GTIVALDFNVQNKGYFFDKNAKLKNFFREKKILIRPLGH--IMYLMPPYCIT 403
G ++A++F GY F K F++ ++ L + + + PP IT
Sbjct: 381 GLLMAIEFRDNEIGYAF-----AKELFQQNILVAGTLNNAKSIRIEPPLTIT 427
>gnl|CDD|180611 PRK06541, PRK06541, hypothetical protein; Provisional.
Length = 460
Score = 178 bits (454), Expect = 2e-45
Identities = 95/327 (29%), Positives = 164/327 (50%), Gaps = 30/327 (9%)
Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFS---EYTH 82
I++ EG Y+ D+ + +D ++ +V+ GH + A A++ + F Y H
Sbjct: 38 IVRGEGCYIWDDRGKRYLDGLAGLFVVQVGHGRAELAEA---AAKQAGTLAFFPLWSYAH 94
Query: 83 EPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMP-RNKIVVMEHGY 141
PA +LA L +AP L VFF+ GS ++E A K+A +F P ++K++ Y
Sbjct: 95 PPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAY 154
Query: 142 HGDTIGSMSVSMRGAFNNSYEPLLFDVETIP------FPHHNEEQKTLDDLEKHCSTQ-- 193
HG T G+++++ AF +EPL+ +P P ++ + + + +
Sbjct: 155 HGTTQGALAITGLPAFKAPFEPLVPGGFRVPNTNFYRAPELGDDPEAF---GRWAADRIE 211
Query: 194 ---------KIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRT 244
+AA +EP+ AGG P + I +YD LL++DEV+ +GR
Sbjct: 212 EAIEFEGPDTVAAVFLEPV-QNAGGCFPPPPGYFERVREICDRYDVLLVSDEVICAFGRL 270
Query: 245 GKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTAN 304
G++F C PDI+ +KGIT G PL A + S+ +F+ L D F H ++ +
Sbjct: 271 GEMFGCERFGYVPDIITCAKGITSGYSPLGAMIASDRLFEPFL--DGPTMFLHGYTFGGH 328
Query: 305 PIACAAALANLQIWEKEPVIERIKNLE 331
P++ A ALANL I+E+E +++ +++ E
Sbjct: 329 PVSAAVALANLDIFEREGLLDHVRDNE 355
>gnl|CDD|178360 PLN02760, PLN02760, 4-aminobutyrate:pyruvate transaminase.
Length = 504
Score = 173 bits (440), Expect = 7e-44
Identities = 125/432 (28%), Positives = 213/432 (49%), Gaps = 56/432 (12%)
Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSE----YT 81
I K+EGSY+ D N K +DA++ W G P ++ A A+E +++ F T
Sbjct: 75 IEKSEGSYVYDINGKKYLDALAGLWCTALGGSEPRLVAA---ATEQLNKLPFYHSFWNRT 131
Query: 82 HEPAEQLARLLIKI-APLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPR---NKIVVM 137
+P+ LA+ L+++ + VFF++SGS + + +K+ ++ NN + R K +
Sbjct: 132 TKPSLDLAKELLEMFTARKMGKVFFTNSGSEANDTQVKLV--WYYNNALGRPNKKKFIAR 189
Query: 138 EHGYHGDTIGSMSVSMRGAFNNSYE-PLLFDVET-------IPFPHHNEEQ---KTLDDL 186
YHG T+ S S+S A + ++ P F + T P EE+ + D+L
Sbjct: 190 SKSYHGSTLISASLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTRLADNL 249
Query: 187 EKHCSTQ---KIAAFLVEPLILGAGGM----QTYRPYILKEFMRITKKYDTLLIADEVMT 239
E + IAAF+ EP++ GAGG+ TY ++ + KKYD L IADEV+
Sbjct: 250 ENLILKEGPETIAAFIAEPVM-GAGGVIPPPATY----FEKIQAVLKKYDILFIADEVIC 304
Query: 240 GWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDS-HLSSDKKKTFFHS 298
+GR G +F C+ +I PD++ L+K ++ +P+ A L S EI D H S+K +F H
Sbjct: 305 AFGRLGTMFGCDKYNIKPDLVSLAKALSSAYMPIGAVLVSPEISDVIHSQSNKLGSFAHG 364
Query: 299 SSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVA 358
+Y+ +P++CA AL L+I+++ + E + + D + + IR G I+
Sbjct: 365 FTYSGHPVSCAVALEALKIYKERNIPEHVNKIAPRFQDGIKAFSGSPIIGEIRGTGLILG 424
Query: 359 LDFNVQNK------------GYFFDKNAKLKNFFREKKILIRPLGHIMYLMPPYCITATD 406
+F V NK G +F K ++ +L+R G + + PP IT +
Sbjct: 425 TEF-VDNKSPNDPFPAEWGVGAYFGAECK------KRGMLVRVAGDNIMMSPPLIITPEE 477
Query: 407 LDHIYNTINEAV 418
+D + + +A+
Sbjct: 478 VDELISIYGKAL 489
>gnl|CDD|180390 PRK06082, PRK06082, 4-aminobutyrate aminotransferase; Provisional.
Length = 459
Score = 171 bits (435), Expect = 3e-43
Identities = 118/440 (26%), Positives = 195/440 (44%), Gaps = 75/440 (17%)
Query: 16 QHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHG-------HRHPIIMNAIRSA 68
Q P + EG Y+ D + K +D HG + HP ++ ++
Sbjct: 48 QAMSTPCLDVLASAEGIYIEDVDGKKYMD--------FHGNNVHQLGYGHPHVIEKVK-- 97
Query: 69 SENYDQIIFS--EYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNN 126
E ++ FS +T+E A + A L +IA L V F+ G+++I +ALK+A N
Sbjct: 98 -EQMAKLPFSPRRFTNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHITGN 156
Query: 127 NNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIP--------FPHHNE 178
K+V + +HG ++ ++SV F PL+ VE IP FP +
Sbjct: 157 F-----KVVSLWDSFHGASLDAISVGGEACFRQGMGPLMAGVERIPPAVSYRGAFPDADG 211
Query: 179 EQKTLDD-----LEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLI 233
D +EK I AF+ E + +Q K I K++ LLI
Sbjct: 212 SDVHYADYLEYVIEKEGG---IGAFIAEAV--RNTDVQVPSKAYWKRVREICDKHNVLLI 266
Query: 234 ADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKK 293
DE+ G GRTG+ F I PDILC+ KG+ GG +P+AA ++ DK
Sbjct: 267 IDEIPNGMGRTGEWFTHQAYGIEPDILCIGKGLGGGLVPIAAM----------ITKDKYN 316
Query: 294 TFFHSS--SYT--ANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV- 348
T S YT +P+ CAAALA +++ E+E ++E++K + +RL +K+ +
Sbjct: 317 TAAQISLGHYTHEKSPLGCAAALATIEVIEQEGLLEKVKADSQFMRERLLEMKAKYPLIG 376
Query: 349 NIRQMGTIVALDFNVQNKGYFFDKNAKLKNFFREKKILIRPL----------GHIMYLMP 398
++R +G + ++ D++ K + + + +L R L G+++ L P
Sbjct: 377 DVRGIGLLWGVELVT-------DRHTKERAYDEAEAVLYRCLNNGLSFKVSQGNVIQLSP 429
Query: 399 PYCITATDLDHIYNTINEAV 418
P IT +L + EA+
Sbjct: 430 PLIITREELTQALAILEEAI 449
>gnl|CDD|179270 PRK01278, argD, acetylornithine transaminase protein; Provisional.
Length = 389
Score = 171 bits (435), Expect = 4e-43
Identities = 116/408 (28%), Positives = 187/408 (45%), Gaps = 60/408 (14%)
Query: 30 EGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASE------NYDQIIFSEYTHE 83
EG +LIDE+ ++ +D S V + GH HP ++ A++ +E N Y
Sbjct: 21 EGVWLIDEDGERYLDFASGIAVNSLGHAHPHLVEALKEQAEKLWHVSNL-------YRIP 73
Query: 84 PAEQLARLLIKI--APLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMP-RNKIVVMEHG 140
E+LA L++ A VFF++SG+ ++E A+K A + P R +I+ E
Sbjct: 74 EQERLAERLVENSFA----DKVFFTNSGAEAVECAIKTARRYHYGKGHPERYRIITFEGA 129
Query: 141 YHGDTIGSMSVSMRGAFNNSYEPLL--FDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAF 198
+HG T+ +++ + + + PL+ FD +PF + + AA
Sbjct: 130 FHGRTLATIAAGGQEKYLEGFGPLVPGFDQ--VPFGDIEALKAAITP--------NTAAI 179
Query: 199 LVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPD 258
L+EP I G GG++ LK ++ + LLI DEV G GRTGK+FA A +TPD
Sbjct: 180 LIEP-IQGEGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPD 238
Query: 259 ILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTF-FHSSSYTANPIACAAALANLQI 317
I+ ++KGI GG PL A L +EE + T H S+Y NP+A A A L +
Sbjct: 239 IMAVAKGI-GGGFPLGACLATEEA-AKGM------TPGTHGSTYGGNPLAMAVGNAVLDV 290
Query: 318 WEKEPVIERIKNLERMHADRLSLLKSN--KKFVNIRQMGTIVALDFNVQNKGYFFDKNAK 375
++ ++ + +L L +R G ++ L V N
Sbjct: 291 ILAPGFLDNVQRMGLYLKQKLEGLVDRFPDVIEEVRGKGLLLGLKCVVP--------NRD 342
Query: 376 LKNFFREKKILIRPLG-HIMYLMPPYCITATDLDHIYNTINEAVDFLE 422
L R++ +L G +++ L+PP IT + I+EA++ LE
Sbjct: 343 LVQALRDEGLLTVGAGDNVVRLLPPLIITEEE-------IDEALERLE 383
>gnl|CDD|130940 TIGR01885, Orn_aminotrans, ornithine aminotransferase. This model
describes the final step in the biosynthesis of
ornithine from glutamate via the non-acetylated pathway.
Ornithine amino transferase takes L-glutamate
5-semialdehyde and makes it into ornithine, which is
used in the urea cycle, as well as in the biosynthesis
of arginine. This model includes low-GC bacteria and
eukaryotic species. The genes from two species are
annotated as putative acetylornithine aminotransferases
- one from Porphyromonas gingivalis, and the other from
Staphylococcus aureus. After homology searching using
BLAST it was determined that these two sequences were
most closely related to ornithine aminotransferases.
This model's seed includes one characterized hit, from
Bacillus subtilis.
Length = 401
Score = 170 bits (433), Expect = 7e-43
Identities = 114/398 (28%), Positives = 201/398 (50%), Gaps = 27/398 (6%)
Query: 28 KTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTH-EPAE 86
K EG ++ D + +D +S++ + GH HP I+ A+ ++ + S + +
Sbjct: 25 KAEGVHVWDVEGKRYLDFLSAYSAVNQGHCHPKIVKALTEQAQKL--TLSSRAFYNDVFG 82
Query: 87 QLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGF-FNNNNMPRNK--IVVMEHGYHG 143
+ A + K+ G V ++G+ ++E A+K+A + + +P N+ IV + +HG
Sbjct: 83 EFAEYVTKL--FGYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHG 140
Query: 144 DTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVEPL 203
T+G++S+S ++ P + + IP+ + ++ L+D + + AF+VEP
Sbjct: 141 RTLGAISMSTDPDSRTNFGPYVPGFKKIPYNNLEALEEALEDHGPN-----VCAFIVEP- 194
Query: 204 ILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLS 263
I G G+ LK+ + K++ LLIADE+ TG GRTGK+ +H ++ PDI+ L
Sbjct: 195 IQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRTGKLLCVDHENVKPDIVLLG 254
Query: 264 KGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPV 323
K ++GG P++A L +++ + K H S+Y NP+ACA A+A L++ E+E +
Sbjct: 255 KALSGGVYPVSAVLADDDVMLT------IKPGEHGSTYGGNPLACAVAVAALEVLEEEKL 308
Query: 324 IERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVALDFNVQNKGY-FFDKNAKLKNFFRE 382
E + L + D+L L +R G + A+ + G +D KLK E
Sbjct: 309 AENAEKLGEIFRDQLKKLPKP-IITEVRGRGLLNAIVIDESKTGRTAWDLCLKLK----E 363
Query: 383 KKILIRPL-GHIMYLMPPYCITATDLDHIYNTINEAVD 419
K +L +P G+I+ L PP IT LD I + +D
Sbjct: 364 KGLLAKPTHGNIIRLAPPLVITEEQLDEGLEIIKKVID 401
>gnl|CDD|179555 PRK03244, argD, acetylornithine aminotransferase; Provisional.
Length = 398
Score = 166 bits (423), Expect = 9e-42
Identities = 108/393 (27%), Positives = 169/393 (43%), Gaps = 57/393 (14%)
Query: 30 EGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSA------SENYDQIIFSEYTHE 83
EG+ + D + + +D + V GH HP ++ A+ N + E
Sbjct: 33 EGAVVWDVDGKEYLDLLGGIAVNALGHAHPAVVEAVTRQLATLGHVSNL-------FATE 85
Query: 84 PAEQLARLLIKIAPLGLQ-YVFFSDSGSTSIEVALKMA--LGFFNNNNMPRNKIVVMEHG 140
P LA L+++ VFF +SG+ + E A K+A G R KIV E G
Sbjct: 86 PQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLTG--------RTKIVAAEGG 137
Query: 141 YHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLV 200
+HG T+G+++++ + A +EPL VE +P+ +D L AA +
Sbjct: 138 FHGRTMGALALTGQPAKRAPFEPLPGGVEHVPYG-------DVDALAAAVDDD-TAAVFL 189
Query: 201 EPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDIL 260
EP I G G+ L IT ++ LL+ DEV TG GRTG FA H +TPD++
Sbjct: 190 EP-IQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDGVTPDVV 248
Query: 261 CLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFF----HSSSYTANPIACAAALANLQ 316
L+KG+ GG LP+ A L+ H S++ NP+ACAAALA L
Sbjct: 249 TLAKGL-GGGLPIGAC----------LAFGPAADLLTPGLHGSTFGGNPVACAAALAVLD 297
Query: 317 IWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVALDFNVQNKGYFFDKNAKL 376
E ++E + L + L + ++R G ++ + +
Sbjct: 298 TIASEGLLENAERLGEQLRAGIEAL-GHPLVDHVRGRGLLLGIVLTA-------PVAKAV 349
Query: 377 KNFFREKKILIRPLG-HIMYLMPPYCITATDLD 408
+ RE L+ + ++ L PP IT +D
Sbjct: 350 EAAAREAGFLVNAVAPDVIRLAPPLIITDAQVD 382
>gnl|CDD|180995 PRK07482, PRK07482, hypothetical protein; Provisional.
Length = 461
Score = 165 bits (420), Expect = 2e-41
Identities = 130/456 (28%), Positives = 210/456 (46%), Gaps = 68/456 (14%)
Query: 12 HPFV---QHFCNPTFKKIIKT-EGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRS 67
HP H +I++ EG + D + IDA + + + G+ + AI
Sbjct: 18 HPSTHLGDHARGELPGRIVEGGEGIRITDAQGRRYIDAFAGLYCVNVGYGRTEVAEAI-- 75
Query: 68 ASENYDQIIFSEYTH-------EPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMA 120
+Q Y H E + L++ +I AP G+ V++ SGS + E +K
Sbjct: 76 ----AEQAKELAYYHTYVGHGTEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIK-- 129
Query: 121 LGFFNNNNMPR---NKIVVMEHGYHGDTIGSMSVSMRG--AFNNSYEPLLFDVETIPFPH 175
L ++ NN + R KI+ GYHG + ++ S+ G F+ ++ + V PH
Sbjct: 130 LVWYYNNVLGRPEKKKIISRWRGYHGSGV--VTGSLTGLSLFHQHFDLPIARVLHTEAPH 187
Query: 176 H--------NEEQ---KTLDDLEKHCSTQ---KIAAFLVEPLILGAGGM----QTYRPYI 217
+ +EEQ D+LE+ + IAAF+ EP +LG GG+ Y P I
Sbjct: 188 YYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEP-VLGTGGIVPPPAGYWPAI 246
Query: 218 LKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATL 277
+ KKYD LLIADEV+TG+GR G +F +H I PD++ ++KG+T PL+ ++
Sbjct: 247 QA----VLKKYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLITVAKGLTSAYAPLSGSI 302
Query: 278 CSEEIFDSHLS-SDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKN-----LE 331
E+++D SD+ H +Y+ +PI AAALANL I E+E ++
Sbjct: 303 VGEKVWDVLEQGSDEHGAIGHGWTYSGHPICAAAALANLDILERENLVGNAAEVGAYFRA 362
Query: 332 RMHADRLSLLKSNKKFVNIRQMGTIVALDFNVQNKG--YFFDKNAKL----KNFFREKKI 385
R+ A + +R +G + A++F V ++ FD K+ E+ +
Sbjct: 363 RLRAA----FGDHPLVGEVRGVGMLAAVEF-VADRDDRTPFDPALKIGPQVSAAALERGV 417
Query: 386 LIR--PLGHIMYLMPPYCITATDLDHIYNTINEAVD 419
+ R P G I+ PP +T + D I +AVD
Sbjct: 418 IARAMPHGDILGFAPPLVLTRAEADEIVAIAKDAVD 453
>gnl|CDD|129783 TIGR00700, GABAtrnsam, 4-aminobutyrate aminotransferase,
prokaryotic type. Alternate names include GABA
transaminase, gamma-amino-N-butyrate transaminase, and
beta-alanine--oxoglutarate aminotransferase.
Length = 420
Score = 164 bits (417), Expect = 3e-41
Identities = 104/359 (28%), Positives = 176/359 (49%), Gaps = 31/359 (8%)
Query: 20 NPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSE 79
P F + EG+ L D + +++ID S V+ GH HP +++A+R+ + F
Sbjct: 15 LPVF--AARAEGAILEDVDGNRLIDFASGIAVLNIGHSHPRVVDAVRTQVAEFTHTCFMV 72
Query: 80 YTHEPAEQLARLLIKIAPL-GLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVME 138
+E LA L +IAP G + F +SG+ ++E A+K+A + R +V +
Sbjct: 73 TPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSY-----TGRPGVVAFD 127
Query: 139 HGYHGDTIGSMSVSMRGA-FNNSYEPLLFDVETIPFPHH-----NEEQKTLDDLEK---- 188
HG+HG T +M+++ + + + + P +V P P+ ++Q + D
Sbjct: 128 HGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARA 187
Query: 189 ----HCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRT 244
+AA ++EP + G GG + + +++ + IADEV TG+ RT
Sbjct: 188 IFVIDVGANNVAALVIEP-VQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFART 246
Query: 245 GKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTAN 304
G +FAC H PD++ +K + G LPL+ EI D+ T Y N
Sbjct: 247 GAMFACEHEGPEPDLITTAKSLADG-LPLSGVTGRAEIMDAPAPGGLGGT------YAGN 299
Query: 305 PIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV-NIRQMGTIVALDFN 362
P+ACAAALA L I E E +IER + + R+ DRL+ LK+ + ++R +G ++A++
Sbjct: 300 PLACAAALAVLAIIESEGLIERARQIGRLVTDRLTTLKAVDPRIGDVRGLGAMIAVELV 358
>gnl|CDD|181401 PRK08360, PRK08360, 4-aminobutyrate aminotransferase; Provisional.
Length = 443
Score = 163 bits (413), Expect = 1e-40
Identities = 115/427 (26%), Positives = 192/427 (44%), Gaps = 55/427 (12%)
Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPA 85
+K E + + D ++ ID +S V GH +P ++ AI+ ++
Sbjct: 27 PVKAENAKVWDIEGNEYIDFLSDAAVQNVGHNNPRVVKAIKEQTDKLIHYTPIYGFPVEP 86
Query: 86 EQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDT 145
LA LI+IAP V F SGS + + A+K A + R KI+ Y+G T
Sbjct: 87 LLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAY-----TKRRKILSYLRSYYGST 141
Query: 146 IGSMSVS-----MRGAFNNSYEPLLFDVETIPFPH-------HNEEQKTLDDLEK----- 188
G+MS++ +R L DV IP+P ++ +E
Sbjct: 142 YGAMSLTGLDFPVRALVGE-----LSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKF 196
Query: 189 --HCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGK 246
+ +AA EP I G GM K+ +I ++ LL+ DEV +G GRTGK
Sbjct: 197 EGEVYAEGVAALFAEP-IQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGK 255
Query: 247 IFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPI 306
FA H + PDI+ L K + GG LP++AT+ EI DS H+ + + NP+
Sbjct: 256 WFAIEHFGVEPDIITLGKPLGGG-LPISATIGRAEIMDSL------PPLAHAFTLSGNPV 308
Query: 307 ACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV-NIRQMGTIVALDFNVQN 365
A AAALA ++ E++ +++R + L RL +K + + ++R +G ++ +D V+
Sbjct: 309 ASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKKKHELIGDVRGIGLMIGVDL-VK- 366
Query: 366 KGYFFDKNAKLKNFFREKKILIRPL----------GHIMYLMPPYCITATDLDHIYNTIN 415
D+ K + + K++ R G+++ + PP I LD + +
Sbjct: 367 -----DRETKERAYEEAAKVVWRAWELGLIVTFFSGNVLRIQPPLTIEKEVLDEGLDILE 421
Query: 416 EAVDFLE 422
EA++ +E
Sbjct: 422 EAIEDVE 428
>gnl|CDD|171472 PRK12403, PRK12403, putative aminotransferase; Provisional.
Length = 460
Score = 161 bits (410), Expect = 2e-40
Identities = 111/426 (26%), Positives = 204/426 (47%), Gaps = 46/426 (10%)
Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQI----IFSEYT 81
+++ EG +L D + + +D +S W G+ + A A+ +Q+ +F T
Sbjct: 40 MVRGEGLHLWDNDGKRYLDGMSGLWCTNLGYGRKDLAAA---AARQMEQLPYYNMFFHTT 96
Query: 82 HEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVME-HG 140
H +L+ LL + P + +++SGS + EV ++ ++ P+ KI++ +G
Sbjct: 97 HPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNG 156
Query: 141 YHGDTIGSMSVSMRGAFNNSYEPLLFDVETI--PFPHHNEEQKTLDDLEKHCSTQ----- 193
YHG T+ + ++ F + L+ DV I P+ + N + T + + + Q
Sbjct: 157 YHGSTLAATALGGM-KFMHEMGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKI 215
Query: 194 ------KIAAFLVEPLILGAGGM----QTYRPYILKEFMRITKKYDTLLIADEVMTGWGR 243
+A F+ EP GAGGM ++Y P E RI ++YD LL ADEV+ G+GR
Sbjct: 216 LELGAENVAGFVAEPF-QGAGGMIFPPESYWP----EIQRICRQYDVLLCADEVIGGFGR 270
Query: 244 TGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTA 303
TG+ FA H PD L ++KG+T G +P+ + S+ I ++ + ++ F H +Y+
Sbjct: 271 TGEWFAHEHFGFEPDTLSIAKGLTSGYVPMGGLVLSKRIAEALV--EQGGVFAHGLTYSG 328
Query: 304 NPIACAAALANLQIWEKEPVIERIKN-----LERMHADRLSLLKSNKKFVNIRQMGTIVA 358
+P+A A A+ANL+ E V+ R+K+ L+R + + + ++ G + A
Sbjct: 329 HPVAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLRE---VFGDHPLVGEVQGAGLVAA 385
Query: 359 LDF--NVQNKGYFFDKNA---KLKNFFREKKILIRPLGHIMYLMPPYCITATDLDHIYNT 413
L F + + F ++N + + E+ ++IR M + P ++D + +
Sbjct: 386 LQFAEDKATRKRFANENDLAWRCRTIGFEEGVIIRSTLGRMIMAPALVAGRAEIDELVDK 445
Query: 414 INEAVD 419
AVD
Sbjct: 446 TRIAVD 451
>gnl|CDD|178231 PLN02624, PLN02624, ornithine-delta-aminotransferase.
Length = 474
Score = 161 bits (410), Expect = 3e-40
Identities = 111/406 (27%), Positives = 192/406 (47%), Gaps = 37/406 (9%)
Query: 28 KTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENY---DQIIFSEYTHEP 84
+ +GS + D K +D +S++ + GH HP I+ A+ +E + +++ E
Sbjct: 63 RAKGSRIWDPEGKKYLDFLSAYSAVNQGHCHPKIIKALTEQAEKLTLSSRAFYNDKFPEF 122
Query: 85 AEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGF-FNNNNMPRN--KIVVMEHGY 141
AE L + G V ++G+ +E A+K+A + + +P+N IV +
Sbjct: 123 AEYLTSMF------GYDMVLPMNTGAEGVETAIKLARKWGYEKKGIPKNEAIIVSCCGCF 176
Query: 142 HGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVE 201
HG T+ ++S+S + PLL + F + E+ +IAAFL E
Sbjct: 177 HGRTLAAISMSCDNEATRGFGPLLPGHLKVDF---GDLDALEKIFEED--GDRIAAFLFE 231
Query: 202 PLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILC 261
P I G G+ LK + K++ L+IADE+ TG RTGK+ AC+ ++ PD++
Sbjct: 232 P-IQGEAGVVIPPDGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVVI 290
Query: 262 LSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKE 321
L K + GG +P++A L +++ L + H S++ NP+A A A+A LQ+ + E
Sbjct: 291 LGKALGGGVIPVSAVLADKDVM---LCIKPGE---HGSTFGGNPLASAVAMAALQVVQDE 344
Query: 322 PVIERIKNLERMHADRLSLLKSNKKFVNI----RQMGTIVALDFNVQNKGYF--FDKNAK 375
+ ER L + D+ L K K+F + R G + A+ N G +D K
Sbjct: 345 KLAERSAKLGQELRDQ--LQKIQKQFPKLIKEVRGRGLLNAVVLNSPKLGPVSAYDVCLK 402
Query: 376 LKNFFREKKILIRPL-GHIMYLMPPYCITATDLDHIYNTINEAVDF 420
LK E+ +L +P I+ L PP I+ +L +++ ++
Sbjct: 403 LK----ERGLLAKPTHDTIIRLAPPLSISEDELQECSKALSDVLEH 444
>gnl|CDD|180376 PRK06062, PRK06062, hypothetical protein; Provisional.
Length = 451
Score = 155 bits (395), Expect = 1e-38
Identities = 102/364 (28%), Positives = 166/364 (45%), Gaps = 60/364 (16%)
Query: 30 EGSYLIDENHDKIIDAISSWWVITH-GHRHPIIMNAIRSASENYDQI--IFSEYTHEPAE 86
EGSY+ D + +D SS V T+ GH+HP ++ AI+ E ++ + + ++
Sbjct: 43 EGSYVWDYEGRRYLD-FSSQLVNTNIGHQHPKVVAAIQ---EQAARLCTVAPAHANDARS 98
Query: 87 QLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMA---LGFFNNNNMPRNKIVVMEHGYHG 143
+ ARL+ + AP L VFF++ G+ + E A++MA G R K++ YHG
Sbjct: 99 EAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHTG--------RPKVLSAYRSYHG 150
Query: 144 DTIGSMSVSMRGAFNNSYEPLLFDVETI---------PFPHH------NEEQKT---LDD 185
T ++ N + +P + +T PF + EE++ L
Sbjct: 151 GTGSAI--------NLTGDPRRWPNDTGRAGVVHFFGPFLYRSEFHATTEEEECERALAH 202
Query: 186 LEK---HCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWG 242
LE+ IAA L+E + G G+ P L + ++ +LIADEVM G+G
Sbjct: 203 LERVIELEGPSTIAAILLES-VPGTAGILVPPPGYLAGVRELCDRHGIVLIADEVMAGFG 261
Query: 243 RTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEI---FDSHLSSDKKKTFFHSS 299
RTGK FA H + PD++ +KG+ G +PL SE I F +
Sbjct: 262 RTGKWFAIEHFGVVPDLITFAKGVNSGYVPLGGVAISEAIAATFADRP-------YPGGL 314
Query: 300 SYTANPIACAAALANLQIWEKEPVIERIKNL-ERMHADRLSLLKSNKKFV-NIRQMGTIV 357
+Y+ +P+ACAAA+A + E+E ++E + + L L V +R +G
Sbjct: 315 TYSGHPLACAAAVATINAMEEEGIVENAARIGAEVLGPGLRELAERHPSVGEVRGLGVFW 374
Query: 358 ALDF 361
AL+
Sbjct: 375 ALEL 378
>gnl|CDD|179636 PRK03715, argD, acetylornithine transaminase protein; Provisional.
Length = 395
Score = 153 bits (389), Expect = 7e-38
Identities = 98/338 (28%), Positives = 164/338 (48%), Gaps = 34/338 (10%)
Query: 30 EGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSE--YTHEPAEQ 87
+GS+L D N + +D I W V GH +P ++ A+ + +++I + +EP +
Sbjct: 26 KGSWLYDHNGKRYLDFIQGWAVNCLGHCNPGMVEAL---AAQAEKLINPSPAFYNEPMAK 82
Query: 88 LARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIG 147
LA LL VFF++SG+ + E A+K+A + + +I+ +H +HG T+
Sbjct: 83 LAGLLT--QHSCFDKVFFANSGAEANEGAIKLARKWGRKHKNGAYEIITFDHSFHGRTLA 140
Query: 148 SMSVSMRGAFNNSYEPLLFDVETIP-FPHHNEEQKTLDDLE--KHCSTQKIAAFLVEPLI 204
+MS S + ++ + P +P FP + L+D+ + T K A ++EP +
Sbjct: 141 TMSASGKPGWDTIFAP------QVPGFP-----KAELNDIASVEKLITDKTVAVMLEP-V 188
Query: 205 LGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSK 264
G GG+ +++ +TK++ LLI DEV TG GRTG +FA + I PDI+ L K
Sbjct: 189 QGEGGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIMTLGK 248
Query: 265 GITGGALPLAATLCSEEI--FDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEP 322
GI GG +PLAA L E+ F+ + D+ T Y NP+ A +A +
Sbjct: 249 GI-GGGVPLAALLAKAEVAVFE---AGDQGGT------YNGNPLMTAVGVAVISQLLAPG 298
Query: 323 VIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVALD 360
+E ++ ++L L + R G + AL
Sbjct: 299 FLEGVRARGEYLKEKLLELSEERGLEGERGEGLLRALL 336
>gnl|CDD|181493 PRK08593, PRK08593, 4-aminobutyrate aminotransferase; Provisional.
Length = 445
Score = 153 bits (389), Expect = 8e-38
Identities = 115/416 (27%), Positives = 193/416 (46%), Gaps = 41/416 (9%)
Query: 31 GSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAEQLAR 90
G+ L D + ID ++S GH P ++ AI++ ++ + + HEP +LA+
Sbjct: 33 GATLTDVDGKTYIDLLASASSQNVGHAPPRVVEAIKAQADKFIHYTPAYMYHEPLVRLAK 92
Query: 91 LLIKIAPLGLQ-YVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSM 149
L ++AP + V F SGS + + +K A + R I+ + YHG T GS+
Sbjct: 93 KLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTG-----RPYIISFTNAYHGSTYGSL 147
Query: 150 SVS-----MRGAFNNSYEPLLFDVETIPFPHHNE------EQKTLDDL--------EKHC 190
S+S MR Y PLL IPFP + +++ EK+
Sbjct: 148 SMSGISLNMR----RKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYL 203
Query: 191 STQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFAC 250
++A ++E I G GG+ P + + +++ L D++ G GRTGK +
Sbjct: 204 PADEVACIVIET-IQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSI 262
Query: 251 NHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAA 310
+H +ITPD++ K + GG +P++A + +EI +S L + H + ANP++CAA
Sbjct: 263 SHFNITPDLMSFGKSLAGG-MPMSAIVGRKEIMES-LEAPA-----HLFTTGANPVSCAA 315
Query: 311 ALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV-NIRQMGTIVALDF--NVQNKG 367
ALA + + E E +++R R S FV ++R G + +D + + K
Sbjct: 316 ALATIDMIEDESLLQRSAEKGEYARKRFDQWVSKYNFVGDVRGYGLSIGIDIVSDKKLKT 375
Query: 368 YFFDKNAKLKNF-FREKKILIRPLGHIMYLMPPYCITATDLDHIYNTINEAVDFLE 422
+ K+ N+ F ++I G+++ PP IT LD NTI +A LE
Sbjct: 376 RDNEAALKICNYCFEHGVVIIAVAGNVLRFQPPLVITYEQLDTALNTIEQAFTALE 431
>gnl|CDD|179505 PRK02936, argD, acetylornithine aminotransferase; Provisional.
Length = 377
Score = 153 bits (388), Expect = 1e-37
Identities = 122/436 (27%), Positives = 204/436 (46%), Gaps = 76/436 (17%)
Query: 1 MNHLHSNYPIWHPFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPI 60
M+HL Y + P I+K +G+ + D N +D S V GH HP
Sbjct: 1 MSHLFPTYGRF-PI----------DIVKGKGTKVTDNNGKTYLDFTSGIAVCNLGHCHPT 49
Query: 61 IMNAIRSASENYDQI--IFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALK 118
+ A++ E D I + + +T+ E++A LL + + VFF +SG+ + E ALK
Sbjct: 50 VTKAVQ---EQLDDIWHVSNLFTNSLQEEVASLLAENSAG--DLVFFCNSGAEANEAALK 104
Query: 119 MALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNE 178
+A + ++KIV E +HG T G+MS + + + PLL +PF N+
Sbjct: 105 LA-----RKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPF---ND 156
Query: 179 EQKTLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVM 238
K L ++ +++AA ++E + G GG+ P L+E + KK+ LLI DEV
Sbjct: 157 I-KALKEVM----NEEVAAVMLEV-VQGEGGVIPADPAFLQEVQTLCKKFGALLIIDEVQ 210
Query: 239 TGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFF-- 296
TG GRTG +FA + PDI+ ++KG+ G +P+ A + +E+ + F
Sbjct: 211 TGIGRTGTLFAYEQFGLDPDIVTVAKGL-GNGIPVGAMIGKKELGTA----------FGP 259
Query: 297 --HSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADR-LSLLK---SNKKFV-N 349
H S++ NP+A AAA LQ+ ++ +E ++ + L L+ + + V N
Sbjct: 260 GSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQE----KGEYFLQKLQEELEHLECVKN 315
Query: 350 IRQMGTIVA--LDFNVQNKGYFFDKNAKLKNFFREKKILIRPLGH-IMYLMPPYCITATD 406
IR G ++ V A + RE+ +L+ G ++ L+PP +T +
Sbjct: 316 IRGKGLMIGIECTEEV----------APVIEQLREEGLLVLSAGPNVIRLLPPLVVTKEE 365
Query: 407 LDHIYNTINEAVDFLE 422
LD +AV L+
Sbjct: 366 LD-------QAVYLLK 374
>gnl|CDD|179736 PRK04073, rocD, ornithine--oxo-acid transaminase; Provisional.
Length = 396
Score = 152 bits (387), Expect = 1e-37
Identities = 114/392 (29%), Positives = 192/392 (48%), Gaps = 41/392 (10%)
Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIF-SEYTHEP 84
I + EG ++ D ++ +D +S++ + GHRHP I+ A++ + D++ S H
Sbjct: 26 ISEAEGVWVKDPEGNRYMDMLSAYSAVNQGHRHPKIIQALK---DQADKVTLTSRAFHS- 81
Query: 85 AEQLARLLIKIAPL-GLQYVFFSDSGSTSIEVALKMALGF-FNNNNMPRNK--IVVMEHG 140
+QL K+A L G V ++G+ ++E A+K A + ++ + NK I+ E
Sbjct: 82 -DQLGPWYEKVAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKGVEPNKAEIIACEGN 140
Query: 141 YHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLE--KHCSTQKIAAF 198
+HG T+ ++S+S + + P+L ++ IP+ DLE K T AAF
Sbjct: 141 FHGRTMAAVSLSSEEEYKRGFGPMLPGIKKIPY----------GDLEALKAAITPNTAAF 190
Query: 199 LVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPD 258
LVEP I G G+ LK + K+ + L IADE+ TG GRTGK+FAC+ ++TPD
Sbjct: 191 LVEP-IQGEAGINIPPEGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPD 249
Query: 259 ILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIW 318
+ L K + GG P++ + +I H S++ NP+ACA ++A L++
Sbjct: 250 MYILGKALGGGVFPISCVAANRDILGVFTPGS------HGSTFGGNPLACAVSIAALEVL 303
Query: 319 EKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVALDFNVQNKGYFFDKNAKLKN 378
E+E + ER L ++L + N +R G + ++ N + Y LK
Sbjct: 304 EEEKLPERSLELGEYFKEQLKEID-NPMIKEVRGRGLFIGVELNEPARPYC----EALK- 357
Query: 379 FFREKKILIRPLGH--IMYLMPPYCITATDLD 408
E+ +L + H ++ PP IT +LD
Sbjct: 358 ---EEGLLCKET-HETVIRFAPPLVITKEELD 385
>gnl|CDD|181002 PRK07495, PRK07495, 4-aminobutyrate aminotransferase; Provisional.
Length = 425
Score = 149 bits (379), Expect = 9e-37
Identities = 115/413 (27%), Positives = 194/413 (46%), Gaps = 42/413 (10%)
Query: 28 KTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAEQ 87
+ E + + D+ + ID + V+ GHRHP ++ A+++ + + +E +
Sbjct: 28 RAENAEIWDKEGRRYIDFAAGIAVVNTGHRHPRVIAAVKAQLDRFTHTCHQVVPYENYVR 87
Query: 88 LARLLIKIAPLGL-QYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDTI 146
LA L + P + F +G+ ++E A+K+A R+ ++ G+HG T
Sbjct: 88 LAERLNALVPGDFAKKTIFVTTGAEAVENAVKIA-----RAATGRSAVIAFGGGFHGRTF 142
Query: 147 GSMSVSMRGA-FNNSYEPLLFDVETIPFP---HHNEEQKTLDDLEKHCST----QKIAAF 198
MS++ + + + ++ DV +PFP H +++L L+K Q++AA
Sbjct: 143 MGMSLTGKVVPYKVGFGAMMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAI 202
Query: 199 LVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPD 258
++EP + G GG +K + ++ LLIADEV TG+ RTGK+FA H ++ D
Sbjct: 203 IIEP-VQGEGGFYPAPAAFMKALRELCDQHGILLIADEVQTGFARTGKLFAMEHHEVAAD 261
Query: 259 ILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIW 318
+ ++KG+ GG PLAA EI D+ T Y NP+ AAA A L +
Sbjct: 262 LTTMAKGLAGG-FPLAAVTGRAEIMDAPGPGGLGGT------YGGNPLGIAAAHAVLDVI 314
Query: 319 EKEPVIERIKNLERMHADRLSLLKSN-KKFVNIRQMGTIVALDFNVQNKGYFFDKNAKLK 377
E+E + ER L RL+ L+ + +IR G + A++FN + G +A+
Sbjct: 315 EEEDLCERANQLGNRLKQRLASLRETVPEIADIRGPGFMNAVEFNDADSG---LPSAEFA 371
Query: 378 NFFREKKILIRPL--------GHIMYLMPPYCITATDLDHIYNTINEAVDFLE 422
N R K L + L G+++ + P IT D + EA+D LE
Sbjct: 372 NRVRLKA-LEKGLILLTCGVHGNVIRFLAP--ITIQD-----DVFAEALDILE 416
>gnl|CDD|132290 TIGR03246, arg_catab_astC, succinylornithine transaminase family.
Members of the seed alignment for this protein family
are the enzyme succinylornithine transaminase (EC
2.6.1.81), which catalyzes the third of five steps in
arginine succinyltransferase (AST) pathway, an
ammonia-releasing pathway of arginine degradation. All
seed alignment sequences are found within arginine
succinyltransferase operons, and all proteins that score
above 820.0 bits should function as succinylornithine
transaminase. However, a number of sequences extremely
closely related in sequence, found in different genomic
contexts, are likely to act in different biological
processes and may act on different substrates. This
model is desigated subfamily rather than equivalog,
pending further consideration, for this reason.
Length = 397
Score = 147 bits (372), Expect = 7e-36
Identities = 101/345 (29%), Positives = 169/345 (48%), Gaps = 25/345 (7%)
Query: 27 IKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQI--IFSEYTHEP 84
++ EGS + D+ + ID V GH HP ++ A+ E D++ I + YT+EP
Sbjct: 22 VRGEGSRVWDQQGKEYIDFAGGIAVNALGHAHPELVKAL---IEQADKLWHIGNGYTNEP 78
Query: 85 AEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGF-FNNNNMPRNKIVVMEHGYHG 143
+LA+ L+ VFF +SG+ + E ALK+A + + + +++IV ++ +HG
Sbjct: 79 VLRLAKKLVDAT--FADKVFFCNSGAEANEAALKLARRYALDKHGADKSEIVAFKNSFHG 136
Query: 144 DTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVEPL 203
T+ ++SV + ++ + PL ++ P+ + + D K A +VEP
Sbjct: 137 RTLFTVSVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALISD--------KTCAVIVEP- 187
Query: 204 ILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLS 263
I G GG+ P LK + +++ LLI DEV TG GRTG+++A H +TPDIL +
Sbjct: 188 IQGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDILTSA 247
Query: 264 KGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPV 323
K + GG P+ A L + EI +HL H ++Y NP+ACA A L + +
Sbjct: 248 KAL-GGGFPIGAMLTTTEI-AAHLKVGT-----HGTTYGGNPLACAVAGKVLDLVNTPEL 300
Query: 324 IERIKNLERMHADRLSLLKSNKK-FVNIRQMGTIVALDFNVQNKG 367
+ +K + D L + + F IR G ++ +G
Sbjct: 301 LAGVKQRHDLFVDGLEKINARYNVFSEIRGKGLLIGAVLTEAYQG 345
>gnl|CDD|101376 PRK04013, argD, acetylornithine/acetyl-lysine aminotransferase;
Provisional.
Length = 364
Score = 146 bits (370), Expect = 9e-36
Identities = 104/396 (26%), Positives = 188/396 (47%), Gaps = 56/396 (14%)
Query: 25 KIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFS--EYTH 82
++++ EG Y+ D + +D I+ V GH HP + SE ++++ + + H
Sbjct: 9 RLVRGEGIYVWDSQGRRYLDLIAGIGVNVLGHNHP---EWVEEMSEQLEKLVVAGPMFEH 65
Query: 83 EPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYH 142
E E++ L K + +YV+ +SG+ ++E ALK A + R +I+ M + +H
Sbjct: 66 EEKEEMLEELSKW--VNYEYVYMGNSGTEAVEAALKFARLYTG-----RKEIIAMTNAFH 118
Query: 143 GDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLE--KHCSTQKIAAFLV 200
G T+G++S + + + +EPL+ + IPF +D+E K T++ AA +
Sbjct: 119 GRTMGALSATWKPKYREDFEPLVPGFKHIPF----------NDVEAAKEAITKETAAVIF 168
Query: 201 EPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDIL 260
EP I G GG+ + +K +T+ LLIADEV +G RTGK A H + PDI+
Sbjct: 169 EP-IQGEGGIVPAKEEFVKTLRDLTEDVGALLIADEVQSGL-RTGKFLAIEHYKVEPDIV 226
Query: 261 CLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEK 320
+ KGI G +P++ TL + ++ ++ K H S++ NP+AC A L+I +
Sbjct: 227 TMGKGI-GNGVPVSLTLTNFDV-------ERGK---HGSTFGGNPLACKAVAVTLRILRR 275
Query: 321 EPVIERIKN-LERMHADRLSLLKSNKKFVNIRQMGTIVALDFNVQNKGYFFDKNAKLKNF 379
E ++E+ + +R+ + + I + +QN+GY
Sbjct: 276 ERLVEKAGEKFIEIKGERVVTTRGRGLMIGIVLKKPVGKYVEELQNRGY----------- 324
Query: 380 FREKKILIRPLGH-IMYLMPPYCITATDLDHIYNTI 414
L+ G ++ L+PP I+ ++ + I
Sbjct: 325 ------LVHTAGQRVIRLLPPLIISKDTMEEAKSAI 354
>gnl|CDD|179933 PRK05093, argD, bifunctional
N-succinyldiaminopimelate-
aminotransferase/acetylornithine transaminase protein;
Reviewed.
Length = 403
Score = 145 bits (367), Expect = 3e-35
Identities = 112/348 (32%), Positives = 175/348 (50%), Gaps = 31/348 (8%)
Query: 27 IKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSE-YTHEPA 85
++ EGS + D+ + ID V GH HP ++ A++ E I S +T+EPA
Sbjct: 27 VRGEGSRVWDQQGKEYIDFAGGIAVTALGHCHPALVKALKEQGEKLWHI--SNVFTNEPA 84
Query: 86 EQLARLLIK--IAPLGLQYVFFSDSGSTSIEVALKMALGF-FNNNNMPRNKIVVMEHGYH 142
+LA+ LI A + VFF++SG+ + E A K+A + + + + +I+ + +H
Sbjct: 85 LRLAKKLIDATFA----ERVFFANSGAEANEAAFKLARRYACDRHGPEKTEIIAFHNSFH 140
Query: 143 GDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVEP 202
G T+ ++SV + +++ + P D+ +PF N+ L ++ A +VEP
Sbjct: 141 GRTLFTVSVGGQPKYSDGFGPKPADITHVPF---ND----LAAVKAVID-DHTCAVVVEP 192
Query: 203 LILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCL 262
I G GG+ P L+ + +++ LLI DEV TG GRTG +FA H +TPDIL
Sbjct: 193 -IQGEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDILTS 251
Query: 263 SKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEP 322
+K + GG P+ A L + EI SH K H S+Y NP+ACA A A I
Sbjct: 252 AKAL-GGGFPIGAMLTTAEI-ASHF-----KVGTHGSTYGGNPLACAVAEAVFDIINTPE 304
Query: 323 VIERIKNLERMHADRLSLLKSNKK---FVNIRQMGTIVALDFNVQNKG 367
V+E +K + D L + N+K F IR MG ++ + Q KG
Sbjct: 305 VLEGVKARRQRFVDGLQKI--NQKYGVFSEIRGMGLLIGAELKPQYKG 350
>gnl|CDD|180748 PRK06918, PRK06918, 4-aminobutyrate aminotransferase; Reviewed.
Length = 451
Score = 142 bits (360), Expect = 1e-34
Identities = 109/420 (25%), Positives = 196/420 (46%), Gaps = 37/420 (8%)
Query: 20 NPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSE 79
PTF + G+ + D + ++ ID + I GH HP + A+ + Y F+
Sbjct: 36 IPTFAQ--SANGALVTDVDGNQYIDFAGAIGTINVGHSHPKVKEALHKQVDQYIHTGFNV 93
Query: 80 YTHEPAEQLARLLIKIAPLGL-QYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVME 138
+EP +LA L +AP + V F +SG+ ++E A+K+A + R I+
Sbjct: 94 MMYEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKY-----TKRQGIISFS 148
Query: 139 HGYHGDTIGSMSVSMR-GAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKH-------- 189
G+HG T+ +M+++ + + + P +V PFP+ + L + +
Sbjct: 149 RGFHGRTLMTMTMTSKVKPYKFGFGPFAPEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFK 208
Query: 190 ------CSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGR 243
+ + IAA ++EP + G GG ++E I ++ L +ADE+ TG+ R
Sbjct: 209 NFFISEVAPETIAAVVMEP-VQGEGGFIVPSKKFVQEVRNICSEHGILFVADEIQTGFAR 267
Query: 244 TGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTA 303
TGK FA H D+ PD++ +SK + G +P++ + +EI D + T Y
Sbjct: 268 TGKYFAIEHFDVVPDLITVSKSLGAG-VPISGVIGRKEIMDESAPGELGGT------YAG 320
Query: 304 NPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV-NIRQMGTIVALDFN 362
+P+ CAAALA L I EKE + +R L ++ +R +K+ + ++R +G + A +
Sbjct: 321 SPLGCAAALAVLDIIEKENLNDRAIELGKVVMNRFEEMKNKYNCIGDVRGLGAMCAFELV 380
Query: 363 VQNKGYFFDK--NAKLKNFFREKKILIRPL---GHIMYLMPPYCITATDLDHIYNTINEA 417
K DK A + ++ +L+ G+++ ++ P IT L+ I E+
Sbjct: 381 QDRKTKEPDKTLTANICKEANKRGLLLLSAGTYGNVIRVLMPLVITDEQLEEGLTIIEES 440
>gnl|CDD|180372 PRK06058, PRK06058, 4-aminobutyrate aminotransferase; Provisional.
Length = 443
Score = 142 bits (361), Expect = 1e-34
Identities = 101/353 (28%), Positives = 171/353 (48%), Gaps = 42/353 (11%)
Query: 31 GSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEP----AE 86
G + D + +++ID S V + G+ P ++ A+R + F +E AE
Sbjct: 47 GGIVEDVDGNRLIDLGSGIAVTSVGNSAPRVVEAVREQVARFTHTCFMVTPYEGYVAVAE 106
Query: 87 QLARLLIKIAPLG---LQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHG 143
QL RL P G + F+ SG+ ++E A+K+A + R +VV +H YHG
Sbjct: 107 QLNRL----TP-GDHEKRSALFN-SGAEAVENAVKIA-----RSYTGRQAVVVFDHAYHG 155
Query: 144 DTIGSMSVSMRGA-FNNSYEPLLFDVETIP--FPHHNEE----------QKTLDDLEKHC 190
T +M+++ + + + + P +V P +P+ + + + + +EK
Sbjct: 156 RTNLTMALTAKSMPYKSGFGPFAPEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQV 215
Query: 191 STQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFAC 250
+AA ++EP I G GG L + ++ + IADEV TG+ RTG FAC
Sbjct: 216 GADNLAAVIIEP-IQGEGGFIVPAEGFLPALLEWCRENGVVFIADEVQTGFARTGAWFAC 274
Query: 251 NHADITPDILCLSKGITGGALPLAATLCSEEIFDS-HLSSDKKKTFFHSSSYTANPIACA 309
H I PD++ +KGI GG LPL+A EI D+ H +Y NP+ACA
Sbjct: 275 EHEGIVPDLITTAKGIAGG-LPLSAVTGRAEIMDAPHPGG-------LGGTYGGNPVACA 326
Query: 310 AALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV-NIRQMGTIVALDF 361
AALA ++ E++ ++ R + +E + DRL L + + ++R G ++A++
Sbjct: 327 AALAAIETIEEDDLVARARQIEALMTDRLRALAAEDDRIGDVRGRGAMIAIEL 379
>gnl|CDD|180330 PRK05965, PRK05965, hypothetical protein; Provisional.
Length = 459
Score = 137 bits (346), Expect = 6e-33
Identities = 103/407 (25%), Positives = 190/407 (46%), Gaps = 31/407 (7%)
Query: 31 GSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSE-YTH---EPAE 86
G+ L D + +++DA + W + G+ I + +A+E ++ ++ Y H EPA
Sbjct: 37 GATLTDASGHQLLDAFAGLWCVNVGYGQESI---VEAAAEQMRELPYATGYFHFGSEPAI 93
Query: 87 QLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMP-RNKIVVMEHGYHGDT 145
+LA L + AP L +V+F+ GS +++ A++ ++N P + + + +E GYHG +
Sbjct: 94 RLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSS 153
Query: 146 IGSMSVSMRGAFNNSYEPLLFDVETIP--FPHHNEEQKT-----------LDDLEKHCST 192
++ AF+ ++ L IP +P+ N L
Sbjct: 154 SVGAGLTALPAFHRGFDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGA 213
Query: 193 QKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNH 252
+AAF EP I G+GG+ LK ++ L +ADEV+TG+GRTG +FAC
Sbjct: 214 DNVAAFFCEP-IQGSGGVIVPPKGWLKAMREACRELGILFVADEVITGFGRTGPLFACEA 272
Query: 253 ADITPDILCLSKGITGGALPLAATLCSEEIFDSHL-SSDKKKTFFHSSSYTANPIACAAA 311
+ PD++ ++KG+T G +P+ A L S+ ++ + H +Y+A+P++ A
Sbjct: 273 EGVVPDLMTVAKGLTSGYVPMGAVLMSDHVYQGIADGAGAAAPVGHGYTYSAHPVSAAVG 332
Query: 312 LANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVALDFNVQNKG--YF 369
L L+++ + ++ + A L L+++ ++R G + AL+ V +K
Sbjct: 333 LEVLRLYHEGGLLANGQKAGPRFAAGLDALRAHPLVGDVRGRGLLGALEL-VADKATKTP 391
Query: 370 FDKNAKL--KNFFR--EKKILIRPLG-HIMYLMPPYCITATDLDHIY 411
FD + F R ++ R G ++ P C T + D I+
Sbjct: 392 FDAALDPADRIFDRAYANGLVFRAFGDGVLGFAPALCCTEGEFDLIF 438
>gnl|CDD|180690 PRK06777, PRK06777, 4-aminobutyrate aminotransferase; Provisional.
Length = 421
Score = 134 bits (340), Expect = 3e-32
Identities = 95/346 (27%), Positives = 170/346 (49%), Gaps = 25/346 (7%)
Query: 28 KTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAEQ 87
+ E + L D + ID + V+ GHRHP ++ A+R + + + +
Sbjct: 28 RAENATLWDVEGREYIDFAAGIAVLNTGHRHPKVVAAVRQQLDQFTHTAYQIVPYASYVT 87
Query: 88 LARLLIKIAPLG--LQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDT 145
LA + +AP+ + FF+ +G+ ++E A+K+A + R ++ +HG T
Sbjct: 88 LAERINALAPIDGPAKTAFFT-TGAEAVENAVKIARAY-----TGRPGVIAFGGAFHGRT 141
Query: 146 IGSMSVSMRGA-FNNSYEPLLFDVETIPFP---HHNEEQKTLDDLEK--HC--STQKIAA 197
+ +M+++ + A + + P + +P H ++ L +E+ + ++AA
Sbjct: 142 LLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAA 201
Query: 198 FLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITP 257
L+EP I G GG P + + ++ LLIADEV TG+ RTGK+FA + D+ P
Sbjct: 202 ILLEP-IQGEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKP 260
Query: 258 DILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQI 317
D++ ++K + GG +P++A + E+ D+ T Y NP+A AAALA L +
Sbjct: 261 DLITMAKSLGGG-MPISAVVGRAEVMDAPAPGGLGGT------YAGNPLAVAAALAVLDV 313
Query: 318 WEKEPVIERIKNLERMHADRLSLLK-SNKKFVNIRQMGTIVALDFN 362
+E + +R L + L K S V+IR G++VA++FN
Sbjct: 314 IAEEKLCQRALILGAHLVEVLEKAKASCPAIVDIRARGSMVAVEFN 359
>gnl|CDD|129792 TIGR00709, dat, 2,4-diaminobutyrate 4-transaminases. This family
consists of L-diaminobutyric acid transaminases. This
general designation covers both 2.6.1.76
(diaminobutyrate-2-oxoglutarate transaminase, which uses
glutamate as the amino donor in DABA biosynthesis), and
2.6.1.46 (diaminobutyrate--pyruvate transaminase, which
uses alanine as the amino donor). Most members with
known function are 2.6.1.76, and at least some
annotations as 2.6.1.46 in current databases at time of
model revision are incorrect. A distinct branch of this
family contains examples of 2.6.1.76 nearly all of which
are involved in ectoine biosynthesis. A related enzyme
is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also
called GABA transaminase. These enzymes all are
pyridoxal phosphate-containing class III
aminotransferase.
Length = 442
Score = 132 bits (334), Expect = 1e-31
Identities = 93/389 (23%), Positives = 167/389 (42%), Gaps = 50/389 (12%)
Query: 2 NHLHSN---YPIWHPFVQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRH 58
N + SN YP P K +G ++ D + +D ++ + GH H
Sbjct: 8 NEMESNVRSYPRKLPTAFA----------KAQGCWVTDVEGKEYLDFLAGAGTLALGHNH 57
Query: 59 PIIMNAIRSASENYDQIIFSEYTHEPAEQLARLLIKIAPLG-LQYV--FFSDSGSTSIEV 115
P + I ++ + + T + L+ I P + Y F SG+ ++E
Sbjct: 58 PNMKQKILDYLQSGLPLHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEA 117
Query: 116 ALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPH 175
A+K+A + R ++ G+HG TIG+++V+ N+ L+ V+ +P+PH
Sbjct: 118 AIKLAKTYTG-----RTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPH 172
Query: 176 HNEE-----------------QKTLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYIL 218
+ ++D+E K AA ++E I G GG+ L
Sbjct: 173 EYRCPFGIGGEAGSNASIEYFENFIEDVES--GVDKPAAVILEA-IQGEGGVVAAPSEWL 229
Query: 219 KEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLC 278
++ +T+K+D LI DEV G+GR+G +FA HA I PD + +SK + GG LPLA L
Sbjct: 230 QKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVVMSKAV-GGGLPLAVLLI 288
Query: 279 SEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNL-ERMHADR 337
+ E D + H+ ++ N +A L W+ + + + + ER+ +
Sbjct: 289 APEF-------DAWQPAGHTGTFRGNQLAMVTGTEALNYWKDDNLAQNAQERGERITSFL 341
Query: 338 LSLLKSNKKFVNIRQMGTIVALDFNVQNK 366
++K + N+R G + + + +
Sbjct: 342 DDMIKEHPCIGNVRGRGLMQGIMIVDERQ 370
>gnl|CDD|183486 PRK12381, PRK12381, bifunctional succinylornithine
transaminase/acetylornithine transaminase; Provisional.
Length = 406
Score = 132 bits (333), Expect = 2e-31
Identities = 93/335 (27%), Positives = 160/335 (47%), Gaps = 31/335 (9%)
Query: 27 IKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAE 86
++ EGS L D+ + ID V GH HP + A+ + + + YT+EP
Sbjct: 26 VRGEGSRLWDQQGKEYIDFAGGIAVNALGHAHPALREALNEQASKFWHT-GNGYTNEPVL 84
Query: 87 QLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMA----LGFFNNNNMPRNKIVVMEHGYH 142
+LA+ LI A VFF +SG+ + E ALK+A + ++ ++ IV ++ +H
Sbjct: 85 RLAKKLID-ATFA-DRVFFCNSGAEANEAALKLARKYAHDRYGSH---KSGIVAFKNAFH 139
Query: 143 GDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLE--KHCSTQKIAAFLV 200
G T+ ++S + ++ + PL D+ + +DL + A +V
Sbjct: 140 GRTLFTVSAGGQPKYSQDFAPLPPDIRHAAY----------NDLNSASALIDDQTCAVIV 189
Query: 201 EPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDIL 260
EP I G GG+ L+ + +++ LLI DEV TG GRTG+++A H +TPD+L
Sbjct: 190 EP-IQGEGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDVL 248
Query: 261 CLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEK 320
+K + GG P+ A L +E+ S ++ H ++Y NP+A A A L++
Sbjct: 249 TTAKAL-GGGFPIGAMLTTEK-CASVMTVGT-----HGTTYGGNPLASAVAGKVLELINT 301
Query: 321 EPVIERIKNLERMHADRLSLLKSNKK-FVNIRQMG 354
++ +K +RL+ + + F IR +G
Sbjct: 302 PEMLNGVKQRHDWFVERLNTINARYGLFSEIRGLG 336
>gnl|CDD|182078 PRK09792, PRK09792, 4-aminobutyrate transaminase; Provisional.
Length = 421
Score = 132 bits (333), Expect = 2e-31
Identities = 93/344 (27%), Positives = 171/344 (49%), Gaps = 25/344 (7%)
Query: 30 EGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAEQLA 89
E + L D ++ ID + V+ GHRHP ++ A+ + + + +E LA
Sbjct: 30 ENATLKDVEGNEYIDFAAGIAVLNTGHRHPDLVAAVEQQLQQFTHTAYQIVPYESYVTLA 89
Query: 90 RLLIKIAPLG--LQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIG 147
+ +AP+ + FF+ +G+ ++E A+K+A + R ++ G+HG T
Sbjct: 90 EKINALAPVSGQAKTAFFT-TGAEAVENAVKIA-----RAHTGRPGVIAFSGGFHGRTYM 143
Query: 148 SMSVSMRGA-FNNSYEPLLFDVETIPFP---HHNEEQKTLDDLEK----HCSTQKIAAFL 199
+M+++ + A + + P V +P+P H Q +LD +E+ +++AA +
Sbjct: 144 TMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAII 203
Query: 200 VEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDI 259
EP + G GG ++ R+ ++ ++IADEV +G+ RTGK+FA +H PD+
Sbjct: 204 FEP-VQGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDL 262
Query: 260 LCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWE 319
+ ++K + GG +PL+ + + I D+ T Y NP+A AAA A L I +
Sbjct: 263 MTMAKSLAGG-MPLSGVVGNANIMDAPAPGGLGGT------YAGNPLAVAAAHAVLNIID 315
Query: 320 KEPVIERIKNL-ERMHADRLSLLKSNKKFVNIRQMGTIVALDFN 362
KE + ER L +R+ + +S +R +G+++A +FN
Sbjct: 316 KESLCERANQLGQRLKNTLIDAKESVPAIAAVRGLGSMIAAEFN 359
>gnl|CDD|162844 TIGR02407, ectoine_ectB, diaminobutyrate--2-oxoglutarate
aminotransferase. Members of this family of class III
pyridoxal-phosphate-dependent aminotransferases are
diaminobutyrate--2-oxoglutarate aminotransferase (EC
2.6.1.76) that catalyze the first step in ectoine
biosynthesis from L-aspartate beta-semialdehyde. This
family is readily separated phylogenetically from
enzymes with the same substrate and product but involved
in other process such as siderophore or
1,3-diaminopropane biosynthesis. The family TIGR00709
previously included both groups but has now been revised
to exclude the ectoine biosynthesis proteins of this
family. Ectoine is a compatible solute particularly
effective in conferring salt tolerance.
Length = 412
Score = 129 bits (326), Expect = 1e-30
Identities = 108/408 (26%), Positives = 179/408 (43%), Gaps = 37/408 (9%)
Query: 28 KTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFS--EYTHEPA 85
K +GS L DE+ + ID + + +GH +P + A+ + D II S T
Sbjct: 23 KAKGSTLWDEDGKEYIDFFAGAGALNYGHNNPKLKQALIDYLAD-DGIIHSLDMATEAKR 81
Query: 86 EQLARLLIKI-APLGLQY--VFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYH 142
E L I P GL Y F +G+ ++E ALK+A R+ +V + +H
Sbjct: 82 EFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLA-----RKVTGRSNVVSFTNAFH 136
Query: 143 GDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHH-NEEQKTLDDLEKHCSTQ-----KIA 196
G T+GS+SV+ L +V +P+ + + T+ EK A
Sbjct: 137 GMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPA 196
Query: 197 AFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADIT 256
A ++E + G GG+ L+ ++ +++D LLI D++ G GRTG F+ A I
Sbjct: 197 AVILET-VQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIE 255
Query: 257 PDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQ 316
PDI+CLSK I+G LPLA TL E+ D K H+ ++ N +A A A L+
Sbjct: 256 PDIVCLSKSISGYGLPLALTLIKPEL-------DVWKPGEHNGTFRGNNLAFVTATAALE 308
Query: 317 I-WEKEPVIERIKNLERMHADRLSLL--KSNKKFVNIRQMGTIVALDFNVQNKGYFFDKN 373
W + + ++ + +RL + + + +R G + ++ + K
Sbjct: 309 YYWSDDAFEKAVQRKSEIIQERLDRIVAEYPELIKQVRGRGLMQGIECGDGDLAGKIAKA 368
Query: 374 AKLKNFFREKKILIRPLGH---IMYLMPPYCITATDLDHIYNTINEAV 418
A F E ++I G ++ L+PP I L + + +AV
Sbjct: 369 A----F--ENGLIIETSGPNDEVIKLLPPLTIDEETLQQGLDILEQAV 410
>gnl|CDD|162007 TIGR00713, hemL, glutamate-1-semialdehyde-2,1-aminomutase. This
enzyme, glutamate-1-semialdehyde-2,1-aminomutase
(glutamate-1-semialdehyde aminotransferase, GSA
aminotransferase), contains a pyridoxal phosphate
attached at a Lys residue at position 283 of the seed
alignment. It is in the family of class III
aminotransferases.
Length = 423
Score = 126 bits (319), Expect = 1e-29
Identities = 96/349 (27%), Positives = 171/349 (48%), Gaps = 34/349 (9%)
Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEY--THE 83
+ + +G+YL D + ++ ID + SW + GH HP ++ A++ A E + Y E
Sbjct: 34 VARGKGAYLYDVDGNEYIDYVLSWGPLILGHAHPRVVEAVKEALERG-----TSYGAPTE 88
Query: 84 PAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHG 143
LA+ +I P ++ V F +SG+ + A+++A G+ R+KI+ E YHG
Sbjct: 89 AEILLAKEIISRVPS-VEMVRFVNSGTEATMSAVRLARGYTG-----RDKIIKFEGCYHG 142
Query: 144 --DT----IGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEE--QKTLDDLEKHCSTQKI 195
D GS + G + P F T+ P+++ E ++ ++ ++I
Sbjct: 143 HHDALLVKAGS-GAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYG-----EEI 196
Query: 196 AAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADI 255
A +VEP + G G+ +P L +T++Y +LLI DEVMTG+ R A + +
Sbjct: 197 AGVIVEP-VAGNMGVVPPKPEFLAGLRALTEEYGSLLIFDEVMTGF-RVALGGAQEYFGV 254
Query: 256 TPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANL 315
PD+ L K I GG LP+ A EI + L+ + + + + + NP+A AA LA L
Sbjct: 255 EPDLTTLGK-IIGGGLPVGAFGGRREIME-RLAPEGP--VYQAGTLSGNPLAMAAGLATL 310
Query: 316 QIWEKEPVIERIKNLERMHADRLSLLKSNKKF-VNIRQMGTIVALDFNV 363
++ ++E V + L + A+ LS + + + ++G++ +L F
Sbjct: 311 KLLDEEGVYTELDELAKRLAEGLSEVLEDTGIPHTVNRVGSMFSLFFTE 359
>gnl|CDD|180764 PRK06938, PRK06938, diaminobutyrate--2-oxoglutarate
aminotransferase; Provisional.
Length = 464
Score = 122 bits (307), Expect = 2e-28
Identities = 88/330 (26%), Positives = 147/330 (44%), Gaps = 57/330 (17%)
Query: 28 KTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEY------- 80
+ G Y+ D + ID ++ + GH HP+++ AI+ Q++ E
Sbjct: 51 RARGIYVEDVEGRQFIDCLAGAGTLALGHNHPVVIEAIQ-------QVLADELPLHTLDL 103
Query: 81 THEPAEQLARLLIKIAPLGL----QYVFFSDSGSTSIEVALKM---ALGFFNNNNMPRNK 133
T +Q + L P + F +G+ ++E ALK+ A G R+
Sbjct: 104 TTPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATG--------RST 155
Query: 134 IVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHH---------NEEQKT-- 182
++ + GYHG + G++S+ LL V+ +P+P+ +
Sbjct: 156 VLSFQGGYHGMSQGALSLMGNLGPKKPLGALLPGVQFLPYPYDYRCPFGLGGEAGVRANL 215
Query: 183 ------LDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADE 236
LDD E AA ++E ++ G GG+ L+ RIT++ LI DE
Sbjct: 216 HYLENLLDDPES--GVVLPAAVILE-VVQGEGGVIPAPIEWLRGLRRITEEAGIPLIVDE 272
Query: 237 VMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFF 296
+ +G+GRTGK+FA HA I PD++ LSK I GG+LPLA + E + D +
Sbjct: 273 IQSGFGRTGKMFAFEHAGIIPDVVVLSKAI-GGSLPLAVVVYREWL-------DTWQPGA 324
Query: 297 HSSSYTANPIACAAALANLQIWEKEPVIER 326
H+ ++ N +A AA A L+ ++ + E
Sbjct: 325 HAGTFRGNQMAMAAGSATLRYIKEHRLAEH 354
>gnl|CDD|181737 PRK09264, PRK09264, diaminobutyrate--2-oxoglutarate
aminotransferase; Validated.
Length = 425
Score = 121 bits (305), Expect = 5e-28
Identities = 114/419 (27%), Positives = 183/419 (43%), Gaps = 57/419 (13%)
Query: 28 KTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPA-- 85
K +GS+L DE+ + ID + + +GH +P++ A+ + D I H A
Sbjct: 27 KAKGSWLYDEDGKEYIDFFAGAGALNYGHNNPVLKQALIDYLQR-DGITHGLDMHTTAKR 85
Query: 86 ---EQLARLLIKIAPLGLQYV--FFSDSGSTSIEVALKMA---LGFFNNNNMPRNKIVVM 137
E ++K P GL Y F +G+ ++E ALK+A G R IV
Sbjct: 86 EFLETFEETILK--PRGLDYKVQFTGPTGTNAVEAALKLARKVTG--------RTNIVAF 135
Query: 138 EHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFP-HHNEEQKTLDDLEK-----HCS 191
+G+HG T+GS++V+ L +V +P+ + + TL LEK
Sbjct: 136 TNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSG 195
Query: 192 TQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACN 251
AA +VE + G GG+ L+ ++ +K+D LLI D++ G GRTG F+
Sbjct: 196 VDLPAAVIVET-VQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFE 254
Query: 252 HADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAA 311
A ITPDI+ LSK I+G LP+A L E+ D K H+ ++ N +A A
Sbjct: 255 RAGITPDIVTLSKSISGYGLPMALVLIKPEL-------DVWKPGEHNGTFRGNNLAFVTA 307
Query: 312 LANLQ-IWEKEPVIERIKNLERMHADRLS--LLKSNKKFVNIRQMGTIVALDFNVQNKGY 368
A L+ W + + +K + +RL K +R G + +DF
Sbjct: 308 TAALEEYWSDDAFEKEVKAKGELVRERLEEIAAKYPGLGAEVRGRGMMQGIDF------- 360
Query: 369 FFDKNAKL-----KNFFREKKILIR---PLGHIMYLMPPYCITATDLDHIYNTINEAVD 419
+ +L F E ++I P ++ L+PP I +L+ + + EAV
Sbjct: 361 ---GDGELAGKIAAEAF-ENGLIIETSGPEDEVVKLLPPLTIDEEELEEGLDILEEAVA 415
>gnl|CDD|179868 PRK04612, argD, acetylornithine transaminase protein; Provisional.
Length = 408
Score = 120 bits (302), Expect = 7e-28
Identities = 81/318 (25%), Positives = 148/318 (46%), Gaps = 35/318 (11%)
Query: 15 VQHFCNPTFKK----IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASE 70
+ H+ P ++ + + +GS + D+ + +D + V GH P ++ A+ +
Sbjct: 11 LAHYYLPVYRPRQVVLERGQGSRVWDDQGREYLDLAAGIAVCGLGHNDPDLVAALTEQAG 70
Query: 71 ---NYDQIIFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNN 127
+ + +S P +LA L+ + + VF +SG+ + E A+K+ + ++
Sbjct: 71 KLWHTSNVFYSA----PPLKLAEELVTASRFA-EKVFLCNSGTEANEAAIKLVRKWASSQ 125
Query: 128 NMPRNK--IVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDD 185
P +K IV +HG T+ +++ + + + YEPL + F E
Sbjct: 126 GRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEGYEPLPGGFRYVDFND--VEA----- 178
Query: 186 LEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTG 245
LE + +AA ++EP I G GG+ P L + ++D LL+ DE+ G GRTG
Sbjct: 179 LEAAMAGGDVAAVMLEP-IQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTG 237
Query: 246 KIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANP 305
+FA +TPDI+ L+K + GG P+ A L ++ ++ + H +++ NP
Sbjct: 238 TLFAHWQEQVTPDIVTLAKAL-GGGFPIGAMLAGPKV------AETMQFGAHGTTFGGNP 290
Query: 306 IACAAA------LANLQI 317
+A A A LA+ QI
Sbjct: 291 LAAAVARVALRKLASPQI 308
>gnl|CDD|167080 PRK00854, rocD, ornithine--oxo-acid transaminase; Reviewed.
Length = 401
Score = 118 bits (297), Expect = 3e-27
Identities = 99/390 (25%), Positives = 170/390 (43%), Gaps = 34/390 (8%)
Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPA 85
+ + EG ++ D + ++ +D +S++ + GH HP I+ A+ + + S
Sbjct: 27 LTRGEGVWVWDTDGNRYLDCLSAYSAVNQGHCHPKILAAMVEQAGRL--TLTSRAFRN-- 82
Query: 86 EQLARLLIKIAPL-GLQYVFFSDSGSTSIEVALKMALGF-FNNNNMPRNK--IVVMEHGY 141
+QLA L ++A L G V +SG+ ++E A+K + + +P + I+V +
Sbjct: 83 DQLAPLYEELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNF 142
Query: 142 HGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVE 201
HG T+ + S + P +PF + + T AFLVE
Sbjct: 143 HGRTLSIVGFSTDPDARGGFGPFTPGFRVVPFGDAEALEAAI--------TPNTVAFLVE 194
Query: 202 PLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILC 261
P I G G+ + + LI DE+ TG GRTGK+ A H I D+
Sbjct: 195 P-IQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLAEEHEGIEADVTL 253
Query: 262 LSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKE 321
+ K ++GG P++A L + E+ H S++ NP+ACA A A L++ +E
Sbjct: 254 IGKALSGGFYPVSAVLSNSEVLGVLKPGQ------HGSTFGGNPLACAVARAALKVLTEE 307
Query: 322 PVIERIKNLERMHADRLSLLKS--NKKFVNIRQMGTIVALDFNVQNKGYFFDKNAKLKNF 379
+IE N M A L L+S + +R G ++A++ + G +
Sbjct: 308 GMIE---NAAEMGAYFLEGLRSIRSNIVREVRGRGLMLAVELEPEAGG-----ARQYCEA 359
Query: 380 FREKKILIRPL-GHIMYLMPPYCITATDLD 408
+E+ +L + H + L PP IT +D
Sbjct: 360 LKERGLLAKDTHDHTIRLAPPLVITREQVD 389
>gnl|CDD|181227 PRK08088, PRK08088, 4-aminobutyrate aminotransferase; Validated.
Length = 425
Score = 116 bits (292), Expect = 1e-26
Identities = 85/329 (25%), Positives = 153/329 (46%), Gaps = 41/329 (12%)
Query: 51 VITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAEQLARLLIKIAP--LGLQYVFFSDS 108
V+ GH HP ++ A+ + + F +EP +L + + P + + + +
Sbjct: 52 VLNTGHLHPKVVAAVEAQLKKLSHTCFQVLAYEPYLELCEKMNQKVPGDFAKKTLLVT-T 110
Query: 109 GSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVSMRGAFN---------- 158
GS ++E A+K+A R+ ++ YHG T ++++ G N
Sbjct: 111 GSEAVENAVKIARAA-----TKRSGVIAFTGAYHGRTH--YTLALTGKVNPYSAGMGLMP 163
Query: 159 -NSYEPLLFDVETIPFPHHN-EEQKTLDDLEK----HCSTQKIAAFLVEPLILGAGGMQT 212
+ Y L P P H E + +E+ + + IAA ++EP + G GG
Sbjct: 164 GHVYRALY------PCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEP-VQGEGGFYA 216
Query: 213 YRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALP 272
P ++ + ++ +LIADEV TG GRTG +FA + D+ +K I GG P
Sbjct: 217 ASPAFMQRLRALCDEHGIMLIADEVQTGAGRTGTLFAMEQMGVAADLTTFAKSIAGG-FP 275
Query: 273 LAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNL-E 331
LA E+ D+ T Y NPIACAAALA L+++E+E ++++ L E
Sbjct: 276 LAGVTGRAEVMDAIAPGGLGGT------YAGNPIACAAALAVLKVFEQENLLQKANALGE 329
Query: 332 RMHADRLSLLKSNKKFVNIRQMGTIVALD 360
++ L++ + + + ++R +G ++A++
Sbjct: 330 KLKDGLLAIAEKHPEIGDVRGLGAMIAIE 358
>gnl|CDD|179803 PRK04260, PRK04260, acetylornithine aminotransferase; Provisional.
Length = 375
Score = 115 bits (289), Expect = 3e-26
Identities = 99/389 (25%), Positives = 174/389 (44%), Gaps = 46/389 (11%)
Query: 27 IKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSE--YTHEP 84
+K EG+YLID + K +D S V G HP + A++ + I S Y +
Sbjct: 16 VKAEGNYLIDTDGKKYLDFSSGIGVTNLGF-HPQVQQALQKQAG---LIWHSPNLYLNSL 71
Query: 85 AEQLARLLIKIAPLGLQYV-FFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHG 143
E++A+ LI Y+ FF +SG+ + E A+K+A + +I+ ++ +HG
Sbjct: 72 QEEVAQKLIG----DKDYLAFFCNSGAEANEAAIKIA-----RKATGKQEIITFQNSFHG 122
Query: 144 DTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLE--KHCSTQKIAAFLVE 201
T GSMS + + + + + PH + +DL K + AA ++E
Sbjct: 123 RTFGSMSATGQDKIKDGFGDGV--------PHFS--YAIFNDLNSVKALVNKNTAAVMLE 172
Query: 202 PLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPDILC 261
L+ G G+ +K ++ LLI DEV TG GRTGK++A H I PDI
Sbjct: 173 -LVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIFT 231
Query: 262 LSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKE 321
L+KG+ G +P+ A L H S++ N ++ AAA A L I
Sbjct: 232 LAKGLANG-VPVGAMLAKSS-LGGAFGYGS-----HGSTFGGNKLSMAAASATLDIMLTA 284
Query: 322 PVIERI-KNLERMHADRLSLLKSNKKFVNIRQMGTIVALDFNVQNKGYFFDKNAKLKNFF 380
+E+ +N + L+ + +R +G ++ ++ ++L
Sbjct: 285 GFLEQALENGNYLQEQLQKALQDKETVTTVRGLGYMIGIETT--------ADLSQLVEAA 336
Query: 381 REKKILIRPLG-HIMYLMPPYCITATDLD 408
R+K +++ G +++ L+PP +T +++
Sbjct: 337 RDKGLIVLTAGTNVIRLLPPLTLTKEEIE 365
>gnl|CDD|177748 PLN00144, PLN00144, acetylornithine transaminase.
Length = 382
Score = 114 bits (287), Expect = 4e-26
Identities = 86/353 (24%), Positives = 155/353 (43%), Gaps = 36/353 (10%)
Query: 80 YTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGF--FNNNNMPRN----- 132
Y P +LA+ L+ + VFF +SG+ + E A+K A + +
Sbjct: 54 YHTIPQVELAKRLVASS--FADRVFFCNSGTEANEAAIKFARKYQRVRAPDKKDPAASSA 111
Query: 133 -KIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCS 191
+ V + +HG T+G+++++ + + +EPL+ V + + + ++K
Sbjct: 112 TEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEY---GNLEAARKLIQK--- 165
Query: 192 TQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACN 251
K AA VEP + G GG+ L+ + + LL+ DEV G GRTG ++A
Sbjct: 166 -GKTAAVFVEP-VQGEGGIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHE 223
Query: 252 HADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAA 311
+ PDI+ L+K + GG LP+ A L +E++ + D H S++ P+ C AA
Sbjct: 224 AYGVEPDIMTLAKPLAGG-LPIGAVLVTEKVASAINPGD------HGSTFAGGPLVCNAA 276
Query: 312 LANLQIWEKEPVIERI-KNLERMHADRLSLLKSNKKFVNIRQMGTIVALDFNVQNKGYFF 370
LA L K + + K E + L N +R +G +V + +V
Sbjct: 277 LAVLDKISKPGFLASVAKKGEYLRELLRRKLGGNPHVKEVRGVGLLVGIQLDVP------ 330
Query: 371 DKNAKLKNFFREKKILIRPL--GHIMYLMPPYCITATDLDHIYNTINEAVDFL 421
L + R+ +L+ G ++ L+PP I+ +L+ + + + L
Sbjct: 331 --AGPLVDACRDSGLLVLTAGKGDVVRLVPPLVISEAELEQAVEILADCLPAL 381
>gnl|CDD|168145 PRK05639, PRK05639, 4-aminobutyrate aminotransferase; Provisional.
Length = 457
Score = 114 bits (286), Expect = 5e-26
Identities = 109/405 (26%), Positives = 196/405 (48%), Gaps = 54/405 (13%)
Query: 31 GSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTH-EPAEQLA 89
G+ + D + + ID ++ + G+ HP ++ A++ + YTH E A ++A
Sbjct: 44 GALIEDVDGNVFIDFLAGAAAASTGYSHPKLVKAVQEQVALIQHSMIG-YTHSERAIRVA 102
Query: 90 RLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSM 149
L +I+P+ V F SGS ++++A+K++ + R I+ YHG T+G+
Sbjct: 103 EKLAEISPIENPKVLFGLSGSDAVDMAIKVS-----KFSTRRPWILAFIGAYHGQTLGAT 157
Query: 150 SVSMRGAFNNS----YEPLLFDVETIPFPH----------HNEEQ----KTLDDLEKHCS 191
SV+ AF +S + PL+ +V IP+P+ + E + LD LE +
Sbjct: 158 SVA---AFQSSQKRGFSPLMPNVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVF 214
Query: 192 TQ-----KIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGK 246
+ ++AA EP I G G+ KE ++ ++ LL+ DEV TG GRTGK
Sbjct: 215 SHVVPPDEVAALFAEP-IQGDAGIVVPPENFFKELKKLLDEHGILLVMDEVQTGIGRTGK 273
Query: 247 IFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYT--AN 304
FA ++ PD++ KG+ G + L+ + +E+ D L+S S+ T AN
Sbjct: 274 WFASEWFEVKPDLIIFGKGVASG-MGLSGVIGRKELMD--LTSG-------SALLTPAAN 323
Query: 305 PIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV-NIRQMGTIVALDFNV 363
P+ AAA A L+I E+E +++ + RL +K + + + ++R G ++ ++
Sbjct: 324 PVISAAAEATLEIIEEENLLKNALKVGEFIKKRLLEMKESFEVIGDVRGKGLMIGVEIVK 383
Query: 364 QNKGYFFDKNAKLKNFFREKKI-LIRP----LGHIMYLMPPYCIT 403
+N + K+ +R ++ LI P G+++ + PP IT
Sbjct: 384 ENGKPDPELTGKI--CWRAFELGLILPSYGMFGNVIRITPPLVIT 426
>gnl|CDD|180758 PRK06931, PRK06931, diaminobutyrate--2-oxoglutarate
aminotransferase; Provisional.
Length = 459
Score = 112 bits (282), Expect = 2e-25
Identities = 113/444 (25%), Positives = 198/444 (44%), Gaps = 82/444 (18%)
Query: 26 IIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASEN-------------Y 72
I K +G ++ D ++ +D ++ + GH HP ++ +I+ +
Sbjct: 44 IAKAQGVWVTDVEGNQYLDCLAGAGTLALGHNHPDVLQSIQDVLTSGLPLHTLDLTTPLK 103
Query: 73 DQIIFSEYTHEPAEQLARLLIKIAPLGLQYV--FFSDSGSTSIEVALKMALGFFNNNNMP 130
D FSEY LL + G +Y F SG+ ++E A+K+A +
Sbjct: 104 DA--FSEY----------LLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTG----- 146
Query: 131 RNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFDVETIPFPH--------------- 175
R+ ++ GYHG T G+++V+ + N+ L+ V+ +P+PH
Sbjct: 147 RSNVISFSGGYHGMTHGALAVTGNLSPKNAVNGLMPGVQFMPYPHEYRCPLGIGGEAGVK 206
Query: 176 ---HNEEQKTLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLL 232
+ E ++D+E +K AA ++E I G GG+ L++ +T+K+ LL
Sbjct: 207 ALTYYFEN-FIEDVES--GVRKPAAVILEA-IQGEGGVNPAPVEWLQKIREVTQKHGILL 262
Query: 233 IADEVMTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKK 292
I DEV G+ RTGK+FA HA I PDI+ +SK + GG LPLA +E FD+
Sbjct: 263 IVDEVQAGFARTGKMFAFEHAGIEPDIIVMSKAV-GGGLPLAVLGIKKE-FDAWQPGG-- 318
Query: 293 KTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV---N 349
H+ ++ N +A A L L+I ++E + + ER + L + K++ N
Sbjct: 319 ----HTGTFRGNQLAMATGLTTLKILKEENLAQNAA--ERGEWLKAQLAELQKRYPCIGN 372
Query: 350 IRQMGTIVALDF----NVQNKGYFFDKNAKL-----KNFFREKKILIR--PLGHIMYLMP 398
+R G ++ ++ + + + +L K F +L R G+++ L+P
Sbjct: 373 VRGRGLMIGIEIVDERQPADAMGSYPADGELAAAIQKACFENGLLLERGGRNGNVVRLLP 432
Query: 399 PYCITATD----LDHIYNTINEAV 418
P IT + +D + AV
Sbjct: 433 PLLITQAECEEFIDRFEQALLAAV 456
>gnl|CDD|178834 PRK00062, PRK00062, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 426
Score = 103 bits (261), Expect = 6e-23
Identities = 100/341 (29%), Positives = 160/341 (46%), Gaps = 63/341 (18%)
Query: 20 NPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSE 79
P F I + +G+YL D + ++ ID + SW + GH HP ++ A+ A+E + F
Sbjct: 32 TPRF--IERAKGAYLYDVDGNEYIDYVGSWGPMILGHAHPEVVEAVIEAAEK--GLSFGA 87
Query: 80 YTHEPAE-QLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVME 138
T E +LA L+I++ P ++ V +SG+ + A+++A G+ R+KI+ E
Sbjct: 88 PT--ELEVELAELVIELVP-SIEMVRMVNSGTEATMSAIRLARGYTG-----RDKIIKFE 139
Query: 139 HGYHG--D-----------TIG---SMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQ-K 181
YHG D T+G S V P F T+ P+++ E +
Sbjct: 140 GCYHGHADSLLVKAGSGAATLGLPDSPGV-----------PEDFAKHTLTAPYNDLEAVE 188
Query: 182 TLDDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFM----RITKKYDTLLIADEV 237
L E++ +IAA +VEP+ AG M P F+ + ++ LLI DEV
Sbjct: 189 EL--FEEY--GDEIAAVIVEPV---AGNMGVVPP--KPGFLEGLRELCDEHGALLIFDEV 239
Query: 238 MTGWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFH 297
MTG+ R A + +TPD+ L K I GG LP+ A EI + L+ +
Sbjct: 240 MTGF-RVALGGAQGYYGVTPDLTTLGK-IIGGGLPVGAFGGRREIME-QLAPLGP--VYQ 294
Query: 298 SSSYTANPIACAAALANLQIWEKEPVIERIKNLERMHADRL 338
+ + + NP+A AA LA L++ ++ E LE + RL
Sbjct: 295 AGTLSGNPLAMAAGLATLKLLKEPGFYEE---LEAL-TKRL 331
>gnl|CDD|180426 PRK06148, PRK06148, hypothetical protein; Provisional.
Length = 1013
Score = 99.3 bits (248), Expect = 2e-21
Identities = 102/416 (24%), Positives = 173/416 (41%), Gaps = 54/416 (12%)
Query: 25 KIIKTEGSYLIDENHDKIIDAISSWWVITH-GHRHPIIMNAI--RSASENYDQIIFSEYT 81
K ++ G +LID +D ++ + H GH HP ++ A ++A N + + Y
Sbjct: 609 KFVRGWGVWLIDNRGRAYLDCFNN---VCHVGHAHPRVVAAAARQAARLNTN----TRYL 661
Query: 82 H----EPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVM 137
H AE+L L P GL FF +SGS + +AL++A + +V+
Sbjct: 662 HDAIVAYAERLTATL----PDGLTVAFFVNSGSEANSLALRLARAHTGQRDA-----IVL 712
Query: 138 EHGYHGDTIGSMSVS---MRGAFNNSYEPLLFDVETIPFPHHNEE--------QKTLDDL 186
+H YHG T + +S + E +P + E ++ + +
Sbjct: 713 DHAYHGTTTELIDLSPYKFNRKGGKGRPDHVEVAE-VPDSYRGPERWPDAEHGRRFAESV 771
Query: 187 EKHCST-----QKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGW 241
+ + + A F+ E I G L+E + + + IADEV G+
Sbjct: 772 AEQIAAMAAKGRGPAFFIAES-IPSVAGQIFLPEGYLREVYAMVRAAGGVCIADEVQVGF 830
Query: 242 GRTGK-IFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSS 300
GR G +A + PDI+ + K I G P+ A + + EI DS D +F ++
Sbjct: 831 GRVGSHWWAFETQGVVPDIVTMGKPI-GNGHPMGAVVTTREIADSF---DNGMEYF--NT 884
Query: 301 YTANPIACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFV-NIRQMGTI--V 357
+ NP++CA LA L I E E + + L L+ + ++R MG +
Sbjct: 885 FGGNPVSCAIGLAVLDIIEDEDLQRNALEIGNYLLAGLRELQDRFDIIGDVRGMGLFLGI 944
Query: 358 ALDFNVQNKGYFFDKNAKLKNFFREKKILIR---PLGHIMYLMPPYCITATDLDHI 410
L + + K +KN RE+ ILI P +++ + PP + D DH+
Sbjct: 945 ELVTDRKTKAPATAIARYVKNGARERGILIGTEGPHDNVLKIRPPLIFSRADADHL 1000
>gnl|CDD|129782 TIGR00699, GABAtrns_euk, 4-aminobutyrate aminotransferase,
eukaryotic type. Alternate names include GABA
transaminase, gamma-amino-N-butyrate transaminase, and
beta-alanine--oxoglutarate aminotransferase.
Length = 464
Score = 93.4 bits (232), Expect = 1e-19
Identities = 79/304 (25%), Positives = 131/304 (43%), Gaps = 62/304 (20%)
Query: 15 VQHFCNPTFKKIIKTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRS---ASEN 71
V + K+ G+YL+D + ++++D S I G+ +P ++ A +S A+
Sbjct: 38 VHFLADYE-----KSRGNYLVDVDGNRLLDLYSQISSIPIGYNNPALLKAAQSPEMATTL 92
Query: 72 YDQIIFSEYTHEPAEQLARLL----IKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNN 127
++ + P++ A++L +K+AP G V+ SGS + E+A K A ++ +
Sbjct: 93 INRPALGNF---PSKDWAKILKEGILKVAPKGQDQVWTGMSGSDANELAFKAAFMYYRSK 149
Query: 128 N----------------------MPRNKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLL 165
P I+ + +HG GS+S + + P
Sbjct: 150 QRGYQADFSEEENESCMDNQAPGSPDLSILSFKGAFHGRLFGSLSTTRSKPIHKLDIPA- 208
Query: 166 FDVETIPFP------------HHNEEQKTLDDLEK-----HCSTQKIAAFLVEPLILGAG 208
FD PFP + EEQ+ L+++E H +AA +VEP I G
Sbjct: 209 FDWPQAPFPSLKYPLEEHVKENAKEEQRCLEEVEDLIKKWHK---PVAAIIVEP-IQSEG 264
Query: 209 GMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADIT--PDILCLSKGI 266
G P ++ ITKK++ I DEV TG G TGK +A H ++ PD++ SK
Sbjct: 265 GDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDMVTFSKKF 324
Query: 267 -TGG 269
T G
Sbjct: 325 QTAG 328
>gnl|CDD|132295 TIGR03251, LAT_fam, L-lysine 6-transaminase. Characterized members
of this protein family are L-lysine 6-transaminase, also
called lysine epsilon-aminotransferase (LAT). The
immediate product of the reaction of this enzyme on
lysine, 2-aminoadipate 6-semialdehyde, becomes
1-piperideine 6-carboxylate, or P6C. This product may be
converted subsequently to pipecolate or
alpha-aminoadipate, lysine catabolites that may be
precursors of certain seconary metabolites.
Length = 431
Score = 91.8 bits (228), Expect = 3e-19
Identities = 64/269 (23%), Positives = 113/269 (42%), Gaps = 38/269 (14%)
Query: 28 KTEGSYLIDENH-DKIIDAISSWWVITHGHRHPIIMNAIRSASE----------NYDQII 76
++ GS L+D + +D S + + G HP +++ + + N D +
Sbjct: 25 RSRGSVLVDARDGRRYLDMFSFFASMALGMNHPALVDDLAFRARLGAAAVNKPSNSD--V 82
Query: 77 FSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPR----- 131
++ + AR+L L ++FF + G+ ++E ALK A + + +N R
Sbjct: 83 YTVAMARFVDTFARVLG---DPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAA 139
Query: 132 --NKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLL----FDVETIPFPHHNEEQKTLDD 185
+++ + +HG + ++S++ + P D + FP +
Sbjct: 140 LGTQVLHLRQAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIA 199
Query: 186 LEKHCSTQ----------KIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIAD 235
LE+ Q IA F+ EP I G GG +RP L+ + ++D LLI D
Sbjct: 200 LEEEALRQARAAFAERPHDIACFIAEP-IQGEGGDNHFRPEFLRAMRALCDEHDALLIFD 258
Query: 236 EVMTGWGRTGKIFACNHADITPDILCLSK 264
EV TG G TG +A + PDI+ K
Sbjct: 259 EVQTGVGLTGTAWAYQQLGVQPDIVAFGK 287
>gnl|CDD|180427 PRK06149, PRK06149, hypothetical protein; Provisional.
Length = 972
Score = 89.7 bits (223), Expect = 1e-18
Identities = 79/304 (25%), Positives = 126/304 (41%), Gaps = 73/304 (24%)
Query: 55 GHRHPIIMNAI-RSASE-------NYDQII-FSEYTHEPAEQLARLLIKIAPLGLQYVFF 105
GH HP + A R S +Y + FSE RL +AP GL VF
Sbjct: 598 GHGHPRLAAAAARQWSLLNTNSRFHYAAVAEFSE----------RLA-ALAPDGLDTVFL 646
Query: 106 SDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHGDTIGSMSVS------------- 152
+SGS + ++A+++A ++ V + YHG T+ + +VS
Sbjct: 647 VNSGSEANDLAIRLAWAASGRRDV-----VSVLEAYHGWTVATDAVSTSIADNPQALETR 701
Query: 153 ------------MRGAFN--NSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAF 198
RG F +S + DV L++L+ S + +A F
Sbjct: 702 PDWVHPVESPNTYRGRFRGADSAADYVRDVVA-----------QLEELDA--SGRGLAGF 748
Query: 199 LVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIF-ACNHADITP 257
+ EP+ AGG+ Y L++ + + IADEV G+GR G F + P
Sbjct: 749 ICEPVYGNAGGIALPPGY-LQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVP 807
Query: 258 DILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQI 317
DI+ ++KG G PL A + EI ++ + + FF SS +P++C +A L +
Sbjct: 808 DIITMAKG-MGNGHPLGAVITRREIAEAL---EAEGYFF--SSTGGSPVSCRIGMAVLDV 861
Query: 318 WEKE 321
+E
Sbjct: 862 LREE 865
>gnl|CDD|183493 PRK12389, PRK12389, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 428
Score = 86.2 bits (214), Expect = 1e-17
Identities = 87/328 (26%), Positives = 150/328 (45%), Gaps = 51/328 (15%)
Query: 28 KTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAE- 86
+ +G+Y D + +K ID ++++ I GH HP I AI A+EN +++ T E
Sbjct: 41 RGKGAYFYDVDGNKYIDYLAAYGPIITGHAHPHITKAITEAAEN--GVLYG--TPTELEI 96
Query: 87 QLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHG--- 143
+ A++L + P L+ V F +SG+ ++ +++A + R KI+ YHG
Sbjct: 97 EFAKMLKEAIP-SLEKVRFVNSGTEAVMTTIRVARAYTG-----RTKIIKFAGCYHGHSD 150
Query: 144 ----------DTIG---SMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHC 190
T+G S V A +V T+PF ++ LD
Sbjct: 151 LVLVAAGSGPSTLGTPDSAGVPKSIA---------QEVITVPFNDIEALKEALD----KW 197
Query: 191 STQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFAC 250
+ +AA LVEP I+G G+ +P L+ + + L+I DEV+T + R A
Sbjct: 198 GDE-VAAVLVEP-IVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAF-RFMYGGAQ 254
Query: 251 NHADITPDILCLSKGITGGALPLAATLCSEEIFD--SHLSSDKKKTFFHSSSYTANPIAC 308
+ + PD+ L K I GG LP+ A ++I + + L + + + NP +
Sbjct: 255 DLLGVEPDLTALGK-IIGGGLPIGAYGGRKDIMEQVAPLGPA-----YQAGTMAGNPASM 308
Query: 309 AAALANLQIWEKEPVIERIKNLERMHAD 336
AA +A L++ ++E V E++ L M +
Sbjct: 309 AAGIACLEVLQQEGVYEKLDRLGAMLEE 336
>gnl|CDD|134334 PRK00615, PRK00615, glutamate-1-semialdehyde aminotransferase;
Provisional.
Length = 433
Score = 85.2 bits (211), Expect = 3e-17
Identities = 82/313 (26%), Positives = 134/313 (42%), Gaps = 36/313 (11%)
Query: 31 GSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEY--THEPAEQL 88
G ID ID SW + HGH HP I +AI+ +E + Y T E
Sbjct: 44 GDIFIDSLGKTFIDFCGSWGSLIHGHSHPKICDAIQQGAERG-----TSYGLTSEQEILF 98
Query: 89 ARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHG--DT- 145
A L L + F SG+ + A+++A G R+ I+ YHG DT
Sbjct: 99 AEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITG-----RSIIIKFLGCYHGHADTL 153
Query: 146 IGSMSVSMRGAFN-------NSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAF 198
+ +S S + PL ++P+ N+ Q + ++A
Sbjct: 154 LQGISFSETSLDTLTHLVDTDLAHPLTL---SLPY---NDFQIFQTVMNS--LGHRVAGV 205
Query: 199 LVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADITPD 258
+ EP I G+ +P ++ ++ ++ +L I DEV+TG+ R + A + PD
Sbjct: 206 IFEP-ICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVTGF-RVAQGGAAAIYHVKPD 263
Query: 259 ILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIW 318
I K I GG LP AA + + I D HL+ + T F + + + NP+A AA A++ +
Sbjct: 264 ITVYGK-ILGGGLPAAAVVAHKSIMD-HLAPE--GTIFQAGTLSGNPLAMAAGKASINLC 319
Query: 319 EKEPVIERIKNLE 331
++ ++ LE
Sbjct: 320 REQGFYTQLSTLE 332
>gnl|CDD|181363 PRK08297, PRK08297, L-lysine aminotransferase; Provisional.
Length = 443
Score = 81.9 bits (203), Expect = 3e-16
Identities = 72/281 (25%), Positives = 119/281 (42%), Gaps = 47/281 (16%)
Query: 28 KTEGSYLIDENH-DKIIDAISSWWVITHGHRHPIIMN-----------AIRSASENYDQI 75
+++GSYL+D + +D + + G HP + + A+ S N D
Sbjct: 32 RSQGSYLVDARTGRRYLDMFTFFASSALGMNHPALADDPEFRAELGRAALNKPS-NSD-- 88
Query: 76 IFSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPR---- 131
+++ + AR+L L ++FF D G+ ++E ALK+A + + N R
Sbjct: 89 VYTVEMARFVDTFARVLG---DPELPHLFFVDGGALAVENALKVAFDWKSRKNEARGIDP 145
Query: 132 ---NKIVVMEHGYHGDTIGSMSVSMRGAFNNSYEPLLFD-----VETIPFPHHNEEQKTL 183
K++ + +HG + ++S++ + P FD + FP E+ + +
Sbjct: 146 ALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPK-FDWPRIDNPKLRFPLPGEDLEEV 204
Query: 184 DDLEKHCSTQ----------KIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLI 233
+ LE Q IA F+ EP I G GG +RP + ++D LLI
Sbjct: 205 EALEAEALAQARAAFERHPHDIACFIAEP-IQGEGGDNHFRPEFFAAMRELCDEHDALLI 263
Query: 234 ADEVMTGWGRTGKIFACNHADITPDILCLSK-----GITGG 269
DEV TG G TG +A + PDI+ K GI G
Sbjct: 264 FDEVQTGVGLTGTAWAYQQLGVRPDIVAFGKKTQVCGIMAG 304
>gnl|CDD|180807 PRK07046, PRK07046, aminotransferase; Validated.
Length = 453
Score = 64.2 bits (157), Expect = 6e-11
Identities = 53/201 (26%), Positives = 79/201 (39%), Gaps = 34/201 (16%)
Query: 131 RNKIVVMEHGYHG-------DTIGSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTL 183
R KI+V YHG D + V G ++ + F N+ L
Sbjct: 156 RPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDLTATTR-VVEF---ND----L 207
Query: 184 DDLEKHCSTQKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMT---- 239
LE + +AA L EP + GM P + +T++Y TLL+ DE T
Sbjct: 208 AALEAALADGDVAAVLAEP-AMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSG 266
Query: 240 --GWGRTGKIFACNHADITPDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFH 297
G+ R + PD L + K I GG +P A S E+ + ++ H
Sbjct: 267 PGGYTRA--------HGLEPDFLVVGKPIAGG-VPCAVYGFSAELAERAQAAKASAPPGH 317
Query: 298 S---SSYTANPIACAAALANL 315
S ++ +AN +A AA A L
Sbjct: 318 SGIGTTLSANALAMAAMRATL 338
>gnl|CDD|178100 PLN02482, PLN02482, glutamate-1-semialdehyde 2,1-aminomutase.
Length = 474
Score = 64.4 bits (157), Expect = 6e-11
Identities = 80/301 (26%), Positives = 134/301 (44%), Gaps = 35/301 (11%)
Query: 28 KTEGSYLIDENHDKIIDAISSWWVITHGHRHPIIMNAIRSASENYDQIIFSEYTHEPAE- 86
+ +GSY D + ++ ID + SW GH ++ A+ + F P
Sbjct: 87 RVKGSYAWDVDGNEYIDYVGSWGPAIIGHADDEVLAALAETMKKGTS--FGA----PCLL 140
Query: 87 --QLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMALGFFNNNNMPRNKIVVMEHGYHG- 143
LA ++I P ++ V F +SG+ + L++A + R KI+ E YHG
Sbjct: 141 ENVLAEMVIDAVP-SVEMVRFVNSGTEACMGVLRLARAYTG-----REKIIKFEGCYHGH 194
Query: 144 -DTI----GSMSVSMRGAFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQK--IA 196
D+ GS V+ G ++ P T+ P+++ L+ ++K K IA
Sbjct: 195 ADSFLVKAGS-GVATLGLPDSPGVPKAATSATLTAPYND-----LEAVKKLFEANKGEIA 248
Query: 197 AFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRTGKIFACNHADIT 256
A ++EP++ G G + L+ ITK+ LL+ DEVMTG+ R A + IT
Sbjct: 249 AVILEPVV-GNSGFIVPKKEFLEGLREITKENGALLVFDEVMTGF-RIAYGGAQEYFGIT 306
Query: 257 PDILCLSKGITGGALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQ 316
PD+ L K + GG LP+ A EI + + + + + + NP+A A + L+
Sbjct: 307 PDLTTLGK-VIGGGLPVGAYGGRREIMEMVAPAGP---MYQAGTLSGNPLAMTAGIHTLK 362
Query: 317 I 317
Sbjct: 363 R 363
>gnl|CDD|180471 PRK06209, PRK06209, glutamate-1-semialdehyde 2,1-aminomutase;
Provisional.
Length = 431
Score = 55.8 bits (135), Expect = 2e-08
Identities = 39/142 (27%), Positives = 62/142 (43%), Gaps = 13/142 (9%)
Query: 193 QKIAAFLVEPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEVMTG--WGRTGKIFAC 250
+IA ++EP + L E R+ + L I DE++TG W G A
Sbjct: 186 GRIACVILEP-----ATADEPQDGFLHEVRRLCHENGALFILDEMITGFRWHMRG---AQ 237
Query: 251 NHADITPDILCLSKGITGGALPLAATLCSEEI--FDSHLSSDKKKTFFHSSSYTANPIAC 308
I PD+ C K + G ++A E +D+++ F S+++ A A
Sbjct: 238 KLYGIVPDLSCFGKAL-GNGFAVSALAGKREYMELGGLEHTDRERVFLLSTTHGAETHAL 296
Query: 309 AAALANLQIWEKEPVIERIKNL 330
AAA+A + I+ E VIER+
Sbjct: 297 AAAIATMAIYRDEDVIERLHEQ 318
>gnl|CDD|180327 PRK05958, PRK05958, 8-amino-7-oxononanoate synthase; Reviewed.
Length = 385
Score = 37.8 bits (89), Expect = 0.006
Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 21/124 (16%)
Query: 218 LKEFMRITKKYDTLLIADEVM-TG-WGRTGK--IFACNHADITPDILC--LSK--GITGG 269
L E + + +++ L+ DE TG G G+ A IL L K G +G
Sbjct: 187 LAELVALARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALGSSGA 246
Query: 270 ALPLAATLCSEEIFDSHLSSDKKKTFFHSSSYTA-NPIACAAALANLQIWEKEPVIERIK 328
A+ L SE + D +L ++ + F + TA P AAA A L+I +EP ER +
Sbjct: 247 AV-----LGSETLID-YL-INRARPFIFT---TALPPAQAAAARAALRILRREP--ERRE 294
Query: 329 NLER 332
L
Sbjct: 295 RLAA 298
>gnl|CDD|129937 TIGR00858, bioF, 8-amino-7-oxononanoate synthase. This model
represents 8-amino-7-oxononanoate synthase, the BioF
protein of biotin biosynthesis. This model is based on a
careful phylogenetic analysis to separate members of
this family from 2-amino-3-ketobutyrate and other
related pyridoxal phosphate-dependent enzymes. In
several species, including Staphylococcus and Coxiella,
a candidate 8-amino-7-oxononanoate synthase is confirmed
by location in the midst of a biotin biosynthesis operon
but scores below the trusted cutoff of this model.
Length = 360
Score = 35.3 bits (82), Expect = 0.029
Identities = 32/127 (25%), Positives = 57/127 (44%), Gaps = 16/127 (12%)
Query: 218 LKEFMRITKKYDTLLIADE-----VMTGWGR-TGKIFACNHADITPDILCLSKGITGGAL 271
L + + + ++Y L+ D+ V+ GR T + F + + LSK + G
Sbjct: 165 LPQLVALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKAL-GSYG 223
Query: 272 PLAATLCSEEIFDSHLSSDKKKTFFHSSSYTANPIACAAALANLQIWEKEPVIERIKNLE 331
A S+ + D +L ++ +T S++ P AAALA L++ ++EP R + L
Sbjct: 224 --AYVAGSQALID-YLI-NRARTLIFSTALP--PAVAAAALAALELIQEEP--WRREKLL 275
Query: 332 RMHADRL 338
RL
Sbjct: 276 A-LIARL 281
>gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde
dehydrogenase. This model represents the dehydrogenase
responsible for the conversion of
5-carboxymethyl-2-hydroxymuconate semialdehyde to
5-carboxymethyl-2-hydroxymuconate (a tricarboxylic
acid). This is the step in the degradation of
4-hydroxyphenylacetic acid via homoprotocatechuate
following the oxidative opening of the aromatic ring.
Length = 488
Score = 33.6 bits (77), Expect = 0.11
Identities = 18/78 (23%), Positives = 31/78 (39%), Gaps = 8/78 (10%)
Query: 307 ACAAALANLQIWEKEPVIERIKNLERM------HADRLSLLKSNKKFVNIRQMGTIVALD 360
A AA + W + ER + L ++ HAD +++L+ +RQ V
Sbjct: 43 AAKAAKEAFKRWAELKAAERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQQVIRA 102
Query: 361 FNVQNKGYFFDKNAKLKN 378
N +F DK + +
Sbjct: 103 AE--NFRFFADKCEEAMD 118
>gnl|CDD|162663 TIGR02021, BchM-ChlM, magnesium protoporphyrin O-methyltransferase.
This model represents the
S-adenosylmethionine-dependent O-methyltransferase
responsible for methylation of magnesium protoporphyrin
IX. This step is essentiasl for the biosynthesis of both
chlorophyll and bacteriochlorophyll. This model
encompasses two closely related clades, from
cyanobacteria (and plants) where it is called ChlM and
other photosynthetic bacteria where it is known as BchM.
Length = 219
Score = 30.2 bits (68), Expect = 1.0
Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 63 NAIRSASENYDQII-FSEYTHEPAEQLARLLIKIAPLGLQYVFFSDSGSTSIEVALKMAL 121
N + S +D ++ H PA +A+ L +A L + V F+ + T+ LKM
Sbjct: 111 NDLLSLCGEFDIVVCMDVLIHYPASDMAKALGHLASLTKERVIFTFAPKTAWLAFLKMIG 170
Query: 122 GFF 124
F
Sbjct: 171 ELF 173
>gnl|CDD|185520 PTZ00226, PTZ00226, fumarate hydratase; Provisional.
Length = 570
Score = 30.0 bits (68), Expect = 1.1
Identities = 11/48 (22%), Positives = 20/48 (41%), Gaps = 4/48 (8%)
Query: 156 AFNNSYEPLLFDVETIPFPHHNEEQKTLDDLEKHCSTQKIAAFLVEPL 203
++ P+ V+ PH EE + L+DL + ++ E L
Sbjct: 26 NPEFNFVPIFQPVD----PHDTEEYRRLEDLSDYVEVVEVGGGGKEIL 69
>gnl|CDD|180734 PRK06855, PRK06855, aminotransferase; Validated.
Length = 433
Score = 29.5 bits (67), Expect = 1.5
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 11/60 (18%)
Query: 183 LDDLEKHC-STQKIAAFLV----EPLILGAGGMQTYRPYILKEFMRITKKYDTLLIADEV 237
LDDLE IA L+ P G Y IL+E + I ++YD +I DE+
Sbjct: 159 LDDLENKVKYNPSIAGILLINPDNPT-----GA-VYPKEILREIVDIAREYDLFIICDEI 212
>gnl|CDD|183994 PRK13355, PRK13355, bifunctional HTH-domain containing
protein/aminotransferase; Provisional.
Length = 517
Score = 29.3 bits (66), Expect = 2.0
Identities = 13/56 (23%), Positives = 28/56 (50%), Gaps = 11/56 (19%)
Query: 213 YRPYILKEFMRITKKYDTLLIADE-----VMTGWGRTGKIFACNHADITPDILCLS 263
Y +L++ + I +++ ++ +DE VM G T + A + PD+ C++
Sbjct: 298 YPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHT------SIASLAPDLFCVT 347
>gnl|CDD|182912 PRK11028, PRK11028, 6-phosphogluconolactonase; Provisional.
Length = 330
Score = 28.8 bits (65), Expect = 2.6
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 13/55 (23%)
Query: 286 HLSSDKKKTFFHSSSYTAN-----PIACAAALANLQIWEKEPVIERIKNLERMHA 335
H+S+D + F S+SY AN P+ I+ I+ LE H+
Sbjct: 84 HISTDHQGRFLFSASYNANCVSVSPLDKDGIPVA--------PIQIIEGLEGCHS 130
>gnl|CDD|183321 PRK11809, putA, trifunctional transcriptional regulator/proline
dehydrogenase/pyrroline-5-carboxylate dehydrogenase;
Reviewed.
Length = 1318
Score = 28.8 bits (65), Expect = 2.7
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 18/68 (26%)
Query: 307 ACAAALANLQIWEKEPVIERIKNLER----MHADRLSLL-----KSNKKFVN----IRQM 353
A +A+ IW P ER LER M A +L+ ++ K F N +R+
Sbjct: 687 ALESAVNAAPIWFATPPAERAAILERAADLMEAQMQTLMGLLVREAGKTFSNAIAEVRE- 745
Query: 354 GTIVALDF 361
A+DF
Sbjct: 746 ----AVDF 749
>gnl|CDD|151695 pfam11253, DUF3052, Protein of unknown function (DUF3052). This
family of proteins with unknown function appears to be
restricted to Actinobacteria.
Length = 127
Score = 28.8 bits (65), Expect = 3.0
Identities = 10/20 (50%), Positives = 16/20 (80%)
Query: 31 GSYLIDENHDKIIDAISSWW 50
GS L+DE++D ++DA+ WW
Sbjct: 34 GSELVDEDYDDVVDAVLLWW 53
>gnl|CDD|183372 PRK11905, PRK11905, bifunctional proline
dehydrogenase/pyrroline-5-carboxylate dehydrogenase;
Reviewed.
Length = 1208
Score = 28.3 bits (64), Expect = 3.4
Identities = 17/54 (31%), Positives = 19/54 (35%), Gaps = 12/54 (22%)
Query: 306 IACAAALANLQIWEKEPVIERIKNLERMHADRLSLLKSNKKFVNIRQMGTIVAL 359
A AAA A W P ER LER AD + M + AL
Sbjct: 594 RALAAAQAAFPEWSATPAAERAAILERA-ADLME-----------AHMPELFAL 635
>gnl|CDD|180840 PRK07105, PRK07105, pyridoxamine kinase; Validated.
Length = 284
Score = 27.6 bits (62), Expect = 6.2
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 17/57 (29%)
Query: 217 ILKEFMRITKKYDTLLIADEVMTGWGRTGKIFA-------------CNHAD-ITPDI 259
I+ +F++ KK D L++ D VM G GK++ AD ITP++
Sbjct: 92 IVSDFIKYFKKKDLLVVVDPVM---GDNGKLYQGFDQEMVEEMRKLIQKADVITPNL 145
>gnl|CDD|163168 TIGR03167, tRNA_sel_U_synt, tRNA 2-selenouridine synthase. The
Escherichia coli YbbB protein was shown to encode a
selenophosphate-dependent tRNA 2-selenouridine synthase,
essential for modification of some tRNAs to replace a
sulfur atom with selenium. This enzyme works with SelD,
the selenium donor protein, which also acts in
selenocysteine incorporation. Although the members of
this protein family show a fairly deep split, sequences
from both sides of the split are supported by
co-occurence with, and often proximity to, the selD
gene.
Length = 311
Score = 27.6 bits (62), Expect = 7.2
Identities = 9/37 (24%), Positives = 21/37 (56%), Gaps = 2/37 (5%)
Query: 208 GGMQTYRPYILKEFMRITKKYDTLLIADEVMTGWGRT 244
GG + YR +++ + + + + +++ MTG G+T
Sbjct: 107 GGYKAYRRFVIDQLEELPQPFPLIVLGG--MTGSGKT 141
>gnl|CDD|148126 pfam06325, PrmA, Ribosomal protein L11 methyltransferase (PrmA).
This family consists of several Ribosomal protein L11
methyltransferase (EC:2.1.1.-) sequences.
Length = 294
Score = 27.2 bits (61), Expect = 8.3
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 5/42 (11%)
Query: 21 PTFKKIIKTEG----SYLIDENHDKIIDAISSWW-VITHGHR 57
P ++K G S +++E D + +A S + +IT R
Sbjct: 242 PDIYALVKPGGYLILSGILEEQADDVAEAYSQGFELITVEER 283
>gnl|CDD|180923 PRK07309, PRK07309, aromatic amino acid aminotransferase;
Validated.
Length = 391
Score = 27.0 bits (60), Expect = 10.0
Identities = 20/71 (28%), Positives = 24/71 (33%), Gaps = 34/71 (47%)
Query: 212 TYRPYILKEFMRITKKYDTLLIADEV---------------------------------M 238
TY +K + KKYD +I+DEV M
Sbjct: 182 TYSREQIKALADVLKKYDIFVISDEVYSELTYTGEPHVSIAEYLPDQTILINGLSKSHAM 241
Query: 239 TGWGRTGKIFA 249
TGW R G IFA
Sbjct: 242 TGW-RIGLIFA 251
Database: CddB
Posted date: Feb 4, 2011 9:54 PM
Number of letters in database: 5,994,473
Number of sequences in database: 21,608
Lambda K H
0.322 0.137 0.419
Gapped
Lambda K H
0.267 0.0731 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 21608
Number of Hits to DB: 7,110,810
Number of extensions: 464223
Number of successful extensions: 1285
Number of sequences better than 10.0: 1
Number of HSP's gapped: 990
Number of HSP's successfully gapped: 114
Length of query: 423
Length of database: 5,994,473
Length adjustment: 96
Effective length of query: 327
Effective length of database: 3,920,105
Effective search space: 1281874335
Effective search space used: 1281874335
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.1 bits)