HHsearch alignment for GI: 254780489 and conserved domain: PRK06059
>PRK06059 lipid-transfer protein; Provisional.
Probab=99.62 E-value=4.5e-14 Score=111.87 Aligned_cols=257 Identities=17% Similarity=0.191 Sum_probs=152.0
Q ss_pred CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCC--CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH
Q ss_conf 887999999999998643013222344258843100236887--432211210023863334210123101256765788
Q gi|254780489|r 51 HETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPDHLLPP--SSPLITHRLGLMQSGAIDLTGACAGFLYALVMADSY 128 (325)
Q Consensus 51 ~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d~~~P~--~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~~ 128 (325)
T Consensus 20 ~r~~~~l~~eA~~~AL~DAGl~~~dVD~v~~~~~~~~-~~~~~~~~~~~a~~lGl~g~p~~~v~~~~asG~~a~~~A~~~ 98 (399)
T PRK06059 20 GRDFTEYGVVAARAALADAGLDWRQVQLVAGADTIRN-GYPGFVAGATFAQKLGWNGVPVTSSYAACASGSQALQSARAQ 98 (399)
T ss_pred CCCHHHHHHHHHHHHHHHCCCCHHHCCEEEEECCCCC-CCCCCCHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 9798999999999999855999899468843034566-777532269999975998863112116248999999999999
Q ss_pred HHCC-CCEEEEEEECCCCCC----------C--CCC--------------------------------------------
Q ss_conf 7438-850588620122444----------4--622--------------------------------------------
Q gi|254780489|r 129 INSH-QKPVLIIAANLLSRR----------I--NLE-------------------------------------------- 151 (325)
Q Consensus 129 i~~g-~~~vLVv~~e~~S~~----------~--d~~-------------------------------------------- 151 (325)
T Consensus 99 I~sG~~d~vlvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~Al~a~rym~~yG~t~e~lA~vavk~~~~a~~ 178 (399)
T PRK06059 99 ILAGFCDVALVIGADTTPKGFFAPVGGERKNDPDWQRFHLIGATNTVYFALLARRRMDLYGATVEDFAQVKVKNARHGLD 178 (399)
T ss_pred HHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
T ss_conf 98499878999403357876544554556677114443014785088999999999999797999999999999987710
Q ss_pred CC----------------------CC---CCCCCCCEEEEEECCCCCCCCC-----CCEEEEEEEC-CCCCCEEEEECCC
Q ss_conf 24----------------------43---4325442001122057654445-----3113553213-6776527830698
Q gi|254780489|r 152 DK----------------------DT---AIIFGDAAGAVVLAPSPLKDKS-----GILGIELTSD-GSKYDLIKIPTGG 200 (325)
Q Consensus 152 d~----------------------~~---~~lfGDgA~A~il~~~~~~~~~-----~il~~~~~s~-~~~~~~~~~~~~~ 200 (325)
T Consensus 179 NP~A~~r~~it~edvl~s~~Ia~PL~l~dc~~~sDGAaAvVl~s~e~A~~~~~~~~~~~~i~~~~~~~~~~~-------- 250 (399)
T PRK06059 179 NPNARYRKEVSVEDVLASPVVSDPLRLLDICATSDGAAALIVASKSFAEKHLGSVAGVPSVRAISTVTPQYP-------- 250 (399)
T ss_pred CCHHHCCCCCCHHHHCCCCHHHHCCCCCCCCCCCCCEEEEEEECHHHHHHHCCCCCCCEEEEEEEEECCCCC--------
T ss_conf 928666899887887238264526155131788885089999559999872235678839999984057544--------
Q ss_pred CCCCCCCCC-CCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHH------
Q ss_conf 667654455-6552322451454343201003678988997401200122463056541389999997197865------
Q gi|254780489|r 201 STSPAGTNT-HDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKR------ 273 (325)
Q Consensus 201 ~~~~~~~~~-~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~------ 273 (325)
T Consensus 251 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~~a~~ay~~AGi~p~DiDvae~yD~ft~~~l~~lE~lGf~~~Ge~~~~ 324 (399)
T PRK06059 251 QHLPELPDIATDSTAAVPAPERVF------KDQILDAAYAEAGIGPEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEAL 324 (399)
T ss_pred CCCCCCCCCCCCCHHCCCCHHHHH------HHHHHHHHHHHCCCCHHHCEEEEECCCCCHHHHHHHHHCCCCCCCCHHHH
T ss_conf 333233321222101023315567------89999999998299978872775316660989999998499789837999
Q ss_pred ----------HHHHH----HHHCCCCCCCHHHHHHHHHHHH--CC----CCCCCEEEEEEECCCCCCCC
Q ss_conf ----------70021----8540933000599999999980--67----89998999998615510201
Q gi|254780489|r 274 ----------IMVNS----LKDFGNSSSASIPLSLSLENQR--KP----FQKGEKILTISCRRGNDRGI 322 (325)
Q Consensus 274 ----------~~~~~----l~~~GN~~sAsi~~~L~~~~~~--g~----i~~Gd~vll~~~G~G~s~ga 322 (325)
T Consensus 325 v~~G~~~~~G~lPvNtsGGlls~Ghp~gatG~~~~~E~~~QLrG~Ag~rQV~~a~~gl~~n~G~~~~~~ 393 (399)
T PRK06059 325 LRSGATTLGGRIPVNPSGGLACFGEAIPAQAIAQVCELTWQLRGQATGRQVEGAKVGITANQGLFGHGS 393 (399)
T ss_pred HHCCCCCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCCE
T ss_conf 977996679970355886021189966157999999999997488767738986178874778877732