HHsearch alignment for GI: 254780489 and conserved domain: PRK12578
>PRK12578 acetyl-CoA acetyltransferase; Provisional.
Probab=99.64 E-value=2e-14 Score=114.10 Aligned_cols=226 Identities=16% Similarity=0.188 Sum_probs=142.1
Q ss_pred CCCCHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEC--CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH
Q ss_conf 98879999999999986430132223442588431002--3688743221121002386333421012310125676578
Q gi|254780489|r 50 KHETLTDIAIQAGDIALRNANIKKDSISLTLLATSTPD--HLLPPSSPLITHRLGLMQSGAIDLTGACAGFLYALVMADS 127 (325)
Q Consensus 50 ~~e~~~~la~~Aa~~aL~~a~~~~~dId~ii~~s~t~d--~~~P~~a~~v~~~Lg~~~~~~~di~~~C~g~l~aL~~A~~ 127 (325)
T Consensus 17 ~~~s~~eL~~eA~~~Al~dAgl~~~dVD~v~~G~~~~~g~~~~~--~~~~a~~~Gl~~~~~~~v~~~caSG~~av~~A~~ 94 (385)
T PRK12578 17 DDVSIQELAWESIKEALEDAGITQKDVDLVVIGSTAYRGVELYP--APPVSEYSGLTGKVPLRVEAACATGSAAAFTAYT 94 (385)
T ss_pred CCCCHHHHHHHHHHHHHHHHCCCHHHCCEEEEECCCCCCCCCCH--HHHHHHHCCCCCCCCEEECCCCHHHHHHHHHHHH
T ss_conf 99799999999999999984929899599999456755522362--8999997599898866881667789999999999
Q ss_pred HHHCC-CCEEEEEEECCCCCCC--------------CCCCC---------------------------------------
Q ss_conf 87438-8505886201224444--------------62224---------------------------------------
Q gi|254780489|r 128 YINSH-QKPVLIIAANLLSRRI--------------NLEDK--------------------------------------- 153 (325)
Q Consensus 128 ~i~~g-~~~vLVv~~e~~S~~~--------------d~~d~--------------------------------------- 153 (325)
T Consensus 95 ~I~sG~~dvvl~~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~g~~~p~~~al~a~~ym~~yg~~~e~la~vav~~~~~A 174 (385)
T PRK12578 95 SIASGLADIAMAVGVDKMTEVDTSTSLAIGGRGGNYQWEFHMYGTTFPTYYALYATRHMAVFGTTEEQMALVSVKAHKYA 174 (385)
T ss_pred HHHHCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
T ss_conf 99838599999945520577886432011455565320002346652799999999999996969999999999844876
Q ss_pred -----------C------------------CCCCCCCCEEEEEECCCCCCCCCCCE-EEEEEECCCCCCEEEEECCCCCC
Q ss_conf -----------4------------------34325442001122057654445311-35532136776527830698667
Q gi|254780489|r 154 -----------D------------------TAIIFGDAAGAVVLAPSPLKDKSGIL-GIELTSDGSKYDLIKIPTGGSTS 203 (325)
Q Consensus 154 -----------~------------------~~~lfGDgA~A~il~~~~~~~~~~il-~~~~~s~~~~~~~~~~~~~~~~~ 203 (325)
T Consensus 175 ~~np~A~~~~~~t~edvl~s~~i~~Pl~~~dc~~~sDGAaAvvl~s~e~ar~lg~~~pv~I~g~g~~~~~~~~------- 247 (385)
T PRK12578 175 SMNPKAHFQKPVTVEDVLKSRVISWPIKLLDSSPISDGSATAIFASEEKVRELKIDTPVWIDGIGYASDTSYI------- 247 (385)
T ss_pred HCCCCCCCCCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCEEEEECCHHHHHHCCCCCCEEEEEEEECCCCCCC-------
T ss_conf 5696321468778889731576557742764046679846799716999985499986799989852566442-------
Q ss_pred CCCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHCCCCHH----------
Q ss_conf 6544556552322451454343201003678988997401200122463056541389999997197865----------
Q gi|254780489|r 204 PAGTNTHDFYMRITNGADIFYNAVKIMAQSAKQSLRKSDLQPQDINRFIPHQANSRIIQKVCEKIGLSKR---------- 273 (325)
Q Consensus 204 ~~~~~~~~~~~~~~~g~~v~~~~~~~~~~~i~~~l~~~gl~~~did~~i~Hq~~~~~~~~~~~~lgi~~~---------- 273 (325)
T Consensus 248 ----~~~~~~~-----------~~~~~~~A~~~a~~~AGl~~~DiDv~ei~D~Ft~~~l~~~E~lG~~~~Ge~~~~~~~g 312 (385)
T PRK12578 248 ----ARRGEWV-----------GLKATRLAAEMAYKMAKISPNDIEYATVHDCFTIAEIMAYEDLGFVEKGKGGKLLEEG 312 (385)
T ss_pred ----CCCCCCC-----------CCHHHHHHHHHHHHHHCCCHHHCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHCC
T ss_conf ----2356544-----------5638999999999871998665866520354278899999985999888379998678
Q ss_pred ------HHHHH----HHHCCCCCCCHHHHHHHHHHH
Q ss_conf ------70021----854093300059999999998
Q gi|254780489|r 274 ------IMVNS----LKDFGNSSSASIPLSLSLENQ 299 (325)
Q Consensus 274 ------~~~~~----l~~~GN~~sAsi~~~L~~~~~ 299 (325)
T Consensus 313 ~~~~~G~~pvN~~GG~ls~Ghp~gatG~~~v~E~v~ 348 (385)
T PRK12578 313 QTEKGGKVAVNLFGGLKAKGHPLGATGLSMIYEITK 348 (385)
T ss_pred CCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHH
T ss_conf 745699851528830764798455289999999999